BLASTX nr result

ID: Astragalus23_contig00025200 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00025200
         (571 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012571438.1| PREDICTED: zinc finger CCCH domain-containin...    89   6e-17
dbj|GAU22091.1| hypothetical protein TSUD_309950 [Trifolium subt...    79   8e-14
gb|PNY07123.1| zinc finger CCCH domain-containing protein 44-lik...    75   1e-12

>ref|XP_012571438.1| PREDICTED: zinc finger CCCH domain-containing protein 19 [Cicer
           arietinum]
          Length = 1418

 Score = 88.6 bits (218), Expect = 6e-17
 Identities = 55/114 (48%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = -1

Query: 343 MDVEEEEAPPNKSPSPPLQQPSDYDSPPHLSPNPLECDT--DLPNFSNAGALEAVIAEES 170
           MD E +EAP N+SP PPLQQPSD  SPP     P+  D    L NF N G L A I EE 
Sbjct: 1   MDAEVDEAPRNQSP-PPLQQPSDL-SPPQPQNLPINGDIHDSLSNFPNDGGLNAEITEE- 57

Query: 169 TGATTGTDNKDESAVLDDVAAAEGGEMQVMEAEIVVEVSGNEGTDVDLEAAKVE 8
               T  D  + + V D V   + GE+ V++ EIV E  GN+GTDVDLE   VE
Sbjct: 58  ----TNDDAMETAVVFDHVVTMDVGELHVVDGEIVAEEKGNDGTDVDLEPVNVE 107


>dbj|GAU22091.1| hypothetical protein TSUD_309950 [Trifolium subterraneum]
          Length = 387

 Score = 79.0 bits (193), Expect = 8e-14
 Identities = 57/120 (47%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
 Frame = -1

Query: 343 MDVEEEEAPPNKSPSPPLQQPSDYDSPPHLSPNPLECDTDLP---NFSNAGALEAVIAEE 173
           M  EE+EAP N+SP PPLQQPSD       SP P     DLP   +   AG LEAV+A E
Sbjct: 1   MAAEEDEAPLNQSP-PPLQQPSD-------SPLP-----DLPINADIHQAGELEAVVAGE 47

Query: 172 STGATTGTDNKDESAVLDDVAAAEGGEMQVMEA----EIVVEVSGNEGTDVDLEAAKVEE 5
           ++ A       +   V+DDVA AEGGEM  M+      +VVE   +EGT+VDLE   VEE
Sbjct: 48  TSDAAA----VNTEVVVDDVAPAEGGEMHAMDGIEDEIVVVEKKEDEGTEVDLEPENVEE 103


>gb|PNY07123.1| zinc finger CCCH domain-containing protein 44-like [Trifolium
           pratense]
          Length = 419

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 58/118 (49%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
 Frame = -1

Query: 343 MDVEEEEAPPNKSPSPPLQQPSDYDSPPHLSPNPLECDTDLPNFSNAGALEAVIAEESTG 164
           MD EE+EA  N+ P P LQQ +D   PP L   P+  D        AG  EAVI  E++ 
Sbjct: 1   MDAEEDEASRNQFP-PTLQQSADSPPPPDL---PINAD-----IHTAGEFEAVITGETSD 51

Query: 163 ATTGTDNKDESAVLDDVAAAEGGEMQVM---EAEIVV-EVSGNEGTD-VDLEAAKVEE 5
           AT  T+      V+DDVA AEGGEMQ M   E EIVV E   +EGTD VDLE   VEE
Sbjct: 52  ATVNTE-----VVVDDVAPAEGGEMQAMDGIEDEIVVEEEKKDEGTDNVDLEPENVEE 104


Top