BLASTX nr result

ID: Astragalus23_contig00024957 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00024957
         (422 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY16133.1| F-box family protein [Trifolium pratense]               74   1e-14
ref|XP_003615992.1| F-box and associated interaction domain prot...    69   4e-12
ref|XP_013460187.1| F-box and associated interaction domain prot...    68   1e-11
dbj|GAU35596.1| hypothetical protein TSUD_295320 [Trifolium subt...    70   3e-11
dbj|GAU36235.1| hypothetical protein TSUD_214320 [Trifolium subt...    69   7e-11
dbj|GAU36234.1| hypothetical protein TSUD_214310 [Trifolium subt...    67   2e-10

>gb|PNY16133.1| F-box family protein [Trifolium pratense]
          Length = 102

 Score = 74.3 bits (181), Expect = 1e-14
 Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 3/62 (4%)
 Frame = +2

Query: 242 MDRKRKPIPSARARANQRSKHGKEKA---EAQESGTSFSDLPFSITTHILLRLPIKSVLI 412
           M+RKR  IPS RAR  +R K GKEK    E+QE GTSF+DLPF I T IL+RLPIKSVLI
Sbjct: 1   MERKRDSIPSTRAR--KRGKTGKEKVDGVESQELGTSFADLPFPIITDILVRLPIKSVLI 58

Query: 413 CK 418
           CK
Sbjct: 59  CK 60


>ref|XP_003615992.1| F-box and associated interaction domain protein [Medicago
           truncatula]
 gb|AES98950.1| F-box and associated interaction domain protein [Medicago
           truncatula]
          Length = 153

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
 Frame = +2

Query: 191 CRQTSEALRPRASGSVAMDRKRKPIPSARARANQRSKHGKEKA---EAQESGTSFSDLPF 361
           CRQTS      +   VAM+RK   IPS RA+  +++K GKEK    E QE   SF+DLPF
Sbjct: 31  CRQTSSL----SWYCVAMERKSGLIPSPRAK--KKAKTGKEKVDEVEIQELSPSFADLPF 84

Query: 362 SITTHILLRLPIKSVLICK 418
            I T ILLRLPIKSV+ICK
Sbjct: 85  PIATDILLRLPIKSVIICK 103


>ref|XP_013460187.1| F-box and associated interaction domain protein [Medicago
           truncatula]
 gb|KEH34218.1| F-box and associated interaction domain protein [Medicago
           truncatula]
          Length = 163

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
 Frame = +2

Query: 236 VAMDRKRKPIPSARARANQRSKHGKEKA---EAQESGTSFSDLPFSITTHILLRLPIKSV 406
           VAM+RKR  IPS R    +R K GKEK    E QE   SF+DLPF I T +LLRLPIKSV
Sbjct: 52  VAMERKRSLIPSPRD--TKRGKTGKEKVDVVETQELSPSFADLPFPIATDVLLRLPIKSV 109

Query: 407 LICK 418
           L+CK
Sbjct: 110 LVCK 113


>dbj|GAU35596.1| hypothetical protein TSUD_295320 [Trifolium subterraneum]
          Length = 433

 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 40/62 (64%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
 Frame = +2

Query: 242 MDRKRKPIPSARARANQRSKHGKEKA---EAQESGTSFSDLPFSITTHILLRLPIKSVLI 412
           M+RKR  IPSARAR  +R K GKEK    E+QE G SF+DLPF ITT ILLRL  K +LI
Sbjct: 1   MERKRGSIPSARAR--KRGKRGKEKVDDIESQELGPSFADLPFPITTDILLRLSTKPILI 58

Query: 413 CK 418
           CK
Sbjct: 59  CK 60


>dbj|GAU36235.1| hypothetical protein TSUD_214320 [Trifolium subterraneum]
          Length = 309

 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 41/63 (65%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = +2

Query: 242 MDRKRKPIPSARARANQRSKHGKEKA---EAQESGTSFSDLPFSITTHILLRLPIKSVLI 412
           M+RKR  IPSARAR  +R K G EK    E QE G SF+DLPF IT  ILLRL  KSVLI
Sbjct: 1   MERKRGSIPSARAR--KRGKTGNEKVDDIENQELGPSFADLPFPITNDILLRLSTKSVLI 58

Query: 413 CKR 421
           CKR
Sbjct: 59  CKR 61


>dbj|GAU36234.1| hypothetical protein TSUD_214310 [Trifolium subterraneum]
          Length = 357

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
 Frame = +2

Query: 242 MDRKRKPIPSARARANQRSKHGKEKA---EAQESGTSFSDLPFSITTHILLRLPIKSVLI 412
           M+RKR  IPSARAR  +R K GKEK    E++E G SF+DLPF I T ILLRL  K +LI
Sbjct: 1   MERKRGSIPSARAR--KRGKRGKEKIDDIESRELGPSFADLPFPIITDILLRLSTKLILI 58

Query: 413 CKR 421
           CKR
Sbjct: 59  CKR 61


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