BLASTX nr result

ID: Astragalus23_contig00024953 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00024953
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposo...    54   8e-06

>gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1270

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 4/38 (10%)
 Frame = -2

Query: 211  IFFFRGVQREGEVKLLYCKTEEQV----TKALPKARFE 110
            +FF R VQREG+VKL+YCK+E+QV    TKALPK+RFE
Sbjct: 1216 LFFLREVQREGQVKLVYCKSEDQVADILTKALPKSRFE 1253


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