BLASTX nr result
ID: Astragalus23_contig00024373
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00024373
(442 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNY10806.1| histone deacetylase [Trifolium pratense] 48 2e-17
gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense] 48 2e-17
dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subte... 47 7e-17
gb|KYP36194.1| Retrovirus-related Pol polyprotein from transposo... 49 1e-15
gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan] 49 1e-15
gb|PNX63257.1| retrovirus-related Pol polyprotein from transposo... 47 1e-15
gb|PNY05793.1| histone deacetylase [Trifolium pratense] 48 3e-15
gb|PNX63176.1| retrovirus-related Pol polyprotein from transposo... 45 5e-13
gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan] 48 3e-11
gb|PNX93770.1| histone deacetylase [Trifolium pratense] 52 7e-10
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo... 46 2e-08
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo... 46 2e-08
gb|PNX99033.1| retrovirus-related Pol polyprotein from transposo... 48 3e-08
gb|PNX90864.1| retrovirus-related Pol polyprotein from transposo... 47 4e-08
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte... 48 5e-08
dbj|GAU44321.1| hypothetical protein TSUD_305020 [Trifolium subt... 45 5e-08
gb|PNX89801.1| retrovirus-related Pol polyprotein from transposo... 46 1e-07
gb|PNX89792.1| retrovirus-related Pol polyprotein from transposo... 46 1e-07
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo... 45 1e-07
dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subt... 45 2e-07
>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
Length = 1441
Score = 47.8 bits (112), Expect(3) = 2e-17
Identities = 26/59 (44%), Positives = 30/59 (50%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQAN 364
IL GLPEEYN FVMM Y + + KFRQEL+ PA SAN +N
Sbjct: 179 ILEGLPEEYNPFVMMIYGRSDSPSLFDIEGLLLVQESQLAKFRQELSLPAASANVAHSN 237
Score = 47.0 bits (110), Expect(3) = 2e-17
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = +3
Query: 69 VKTLKKCSKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
+KT+KK +K+IS+FV +VR IAD+L +IG+ + +QD +D
Sbjct: 139 LKTVKKGTKSISEFVLRVRAIADTLISIGDSISEQDQID 177
Score = 41.2 bits (95), Expect(3) = 2e-17
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELR 75
VWD+IHK+F HLKAK RQ+R EL+
Sbjct: 116 VWDQIHKYFDAHLKAKVRQLRSELK 140
>gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]
Length = 720
Score = 47.8 bits (112), Expect(3) = 2e-17
Identities = 26/59 (44%), Positives = 30/59 (50%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQAN 364
IL GLPEEYN FVMM Y + + KFRQEL+ PA SAN +N
Sbjct: 179 ILEGLPEEYNPFVMMIYGRSDSPSLFDIEGLLLVQESQLAKFRQELSLPAASANVAHSN 237
Score = 47.0 bits (110), Expect(3) = 2e-17
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = +3
Query: 69 VKTLKKCSKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
+KT+KK +K+IS+FV +VR IAD+L +IG+ + +QD +D
Sbjct: 139 LKTVKKGTKSISEFVLRVRAIADTLISIGDSISEQDQID 177
Score = 41.2 bits (95), Expect(3) = 2e-17
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELR 75
VWD+IHK+F HLKAK RQ+R EL+
Sbjct: 116 VWDQIHKYFDAHLKAKVRQLRSELK 140
>dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subterraneum]
Length = 392
Score = 46.6 bits (109), Expect(3) = 7e-17
Identities = 24/54 (44%), Positives = 30/54 (55%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSAN 349
IL GLPEEYN FVMM Y + + +KFRQEL++P+ SAN
Sbjct: 178 ILEGLPEEYNPFVMMIYGRSDSPSLYDIEGLLLVQESQLEKFRQELSTPSASAN 231
Score = 43.9 bits (102), Expect(3) = 7e-17
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELR 75
VWD+IHKHF HLKAK RQ+R EL+
Sbjct: 115 VWDQIHKHFEAHLKAKVRQLRSELK 139
Score = 43.9 bits (102), Expect(3) = 7e-17
Identities = 18/39 (46%), Positives = 31/39 (79%)
Frame = +3
Query: 69 VKTLKKCSKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
+K +KK +K+I++FV +VR IAD+L +IG+ + +QD +D
Sbjct: 138 LKNVKKGTKSITEFVLRVRVIADTLISIGDSISEQDQID 176
>gb|KYP36194.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 603
Score = 49.3 bits (116), Expect(3) = 1e-15
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQ 358
IL GLPE+YN+FVMM Y + + +K+RQ+LTSP+ S NAVQ
Sbjct: 91 ILDGLPEDYNSFVMMIYGRSDSISVTDVESLLLVQEAQLEKYRQDLTSPSVSVNAVQ 147
Score = 47.0 bits (110), Expect(3) = 1e-15
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNVP 93
+WDKIHKH+Y+HL AK RQ+R EL+ S+ P
Sbjct: 27 IWDKIHKHYYSHLHAKKRQLRSELKSSKIGP 57
Score = 34.3 bits (77), Expect(3) = 1e-15
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 90 SKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
S+ IS+++ ++R I +SL A+GE V +QD +D
Sbjct: 58 SQPISEYILRIRAIINSLIAVGELVTNQDQID 89
>gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan]
Length = 221
Score = 49.3 bits (116), Expect(3) = 1e-15
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQ 358
IL GLPE+YN+FVMM Y + + +K+RQ+LTSP+ S NAVQ
Sbjct: 91 ILDGLPEDYNSFVMMIYGRSDSISVTDVESLLLVQEAQLEKYRQDLTSPSVSVNAVQ 147
Score = 47.0 bits (110), Expect(3) = 1e-15
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNVP 93
+WDKIHKH+Y+HL AK RQ+R EL+ S+ P
Sbjct: 27 IWDKIHKHYYSHLHAKKRQLRSELKSSKIGP 57
Score = 34.3 bits (77), Expect(3) = 1e-15
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 90 SKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
S+ IS+++ ++R I +SL A+GE V +QD +D
Sbjct: 58 SQPISEYILRIRAIINSLIAVGELVTNQDQID 89
>gb|PNX63257.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 247
Score = 47.4 bits (111), Expect(3) = 1e-15
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = +3
Query: 69 VKTLKKCSKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
+KT+KK +KTI++FV +VR IAD+L ++G+ V +QD +D
Sbjct: 137 LKTIKKGTKTITEFVLRVRAIADTLLSVGDSVTEQDQID 175
Score = 42.7 bits (99), Expect(3) = 1e-15
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSAN 349
IL GLPEEYN FVMM Y + + +KFRQEL P SAN
Sbjct: 177 ILDGLPEEYNPFVMMIYGRSDSPSLYDIEGLLLVQESQLEKFRQELMVPNVSAN 230
Score = 40.0 bits (92), Expect(3) = 1e-15
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELR 75
VW++IHK+F HLKAK RQ+R EL+
Sbjct: 114 VWEQIHKYFNAHLKAKVRQLRSELK 138
>gb|PNY05793.1| histone deacetylase [Trifolium pratense]
Length = 1485
Score = 48.1 bits (113), Expect(3) = 3e-15
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + +KFRQEL SP SAN Q+
Sbjct: 200 ILEGLPEEFNSFVMMIYSRLDTPTVEDVEALLMVQEAQFEKFRQELASPNVSANLAQSEA 259
Query: 368 QQSPQAM 388
+ S +++
Sbjct: 260 KTSAESV 266
Score = 40.8 bits (94), Expect(3) = 3e-15
Identities = 16/39 (41%), Positives = 29/39 (74%)
Frame = +3
Query: 69 VKTLKKCSKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
+K KK +++I +++ +++TI DSL AIG+ V DQ+ +D
Sbjct: 160 LKNTKKLARSIGEYLLRIKTIIDSLTAIGDTVSDQEHID 198
Score = 40.0 bits (92), Expect(3) = 3e-15
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWDKIHK+F + LKA+ARQ+R EL+ ++ +
Sbjct: 137 VWDKIHKYFNSLLKARARQLRSELKNTKKL 166
>gb|PNX63176.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 273
Score = 45.1 bits (105), Expect(3) = 5e-13
Identities = 18/39 (46%), Positives = 32/39 (82%)
Frame = +3
Query: 69 VKTLKKCSKTISDFVTKVRTIADSLAAIGEEVKDQDLVD 185
+KT+KK +KTI++F+ +VR +A++L +IG+ V +QD +D
Sbjct: 161 LKTVKKGTKTITEFILRVRAVANTLISIGDSVSEQDQID 199
Score = 43.5 bits (101), Expect(3) = 5e-13
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSAN 349
IL GLPEEYN FVMM Y + + +KFRQEL P SAN
Sbjct: 201 ILDGLPEEYNPFVMMMYGRSDSPSLFDIEGLLLVQESQLEKFRQELAVPNASAN 254
Score = 32.7 bits (73), Expect(3) = 5e-13
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELR 75
VW++IH +F KAK RQ+R EL+
Sbjct: 138 VWEEIHNYFNAQTKAKIRQLRSELK 162
>gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]
Length = 280
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNVP 93
+WDKIHKH+Y+HL AK RQ+R EL+ S+ P
Sbjct: 27 IWDKIHKHYYSHLHAKKRQLRSELKSSKKGP 57
Score = 47.4 bits (111), Expect(2) = 3e-11
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQ 358
IL GLPE+YN+F+MM Y + + +K+RQ+LTSP+ S N VQ
Sbjct: 91 ILDGLPEDYNSFIMMIYGRSDSISVTDVESLLLVQEAQLEKYRQDLTSPSVSVNVVQ 147
>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
Length = 1453
Score = 52.0 bits (123), Expect(2) = 7e-10
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y K N +KFRQEL +P+ SAN Q
Sbjct: 188 ILEGLPEEFNSFVMMVYSKSENPTVEEIEALLLLQEAQFEKFRQELANPSVSANVAQVET 247
Query: 368 QQS 376
Q +
Sbjct: 248 QSN 250
Score = 38.9 bits (89), Expect(2) = 7e-10
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWDKIHK+F + LK++ARQ+R EL+ ++ +
Sbjct: 125 VWDKIHKYFNSVLKSRARQLRSELKNTKKL 154
>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1417
Score = 46.2 bits (108), Expect(2) = 2e-08
Identities = 25/63 (39%), Positives = 31/63 (49%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + +KF+QELTSP+ SAN
Sbjct: 152 ILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELTSPSVSANVAHTET 211
Query: 368 QQS 376
S
Sbjct: 212 NAS 214
Score = 39.7 bits (91), Expect(2) = 2e-08
Identities = 20/34 (58%), Positives = 27/34 (79%), Gaps = 4/34 (11%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIEL----RLSRNV 90
VWDKIHK+F + LK++ARQ+R EL +LSR+V
Sbjct: 89 VWDKIHKYFNSVLKSRARQLRSELKNTKKLSRSV 122
>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1417
Score = 46.2 bits (108), Expect(2) = 2e-08
Identities = 25/63 (39%), Positives = 31/63 (49%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + +KF+QELTSP+ SAN
Sbjct: 152 ILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELTSPSVSANVAHTET 211
Query: 368 QQS 376
S
Sbjct: 212 NAS 214
Score = 39.7 bits (91), Expect(2) = 2e-08
Identities = 20/34 (58%), Positives = 27/34 (79%), Gaps = 4/34 (11%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIEL----RLSRNV 90
VWDKIHK+F + LK++ARQ+R EL +LSR+V
Sbjct: 89 VWDKIHKYFNSVLKSRARQLRSELKNTKKLSRSV 122
>gb|PNX99033.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1101
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + + +KF+QEL++P+ SAN A+
Sbjct: 188 ILEGLPEEFNSFVMMVYSRFDSPTVEDVEALLLLQEAQFEKFKQELSNPSVSANVAHADA 247
Query: 368 QQS 376
Q S
Sbjct: 248 QSS 250
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWDKIHK+F + LK++ RQ+R EL+ ++ +
Sbjct: 125 VWDKIHKYFNSVLKSRTRQLRSELKNTKKL 154
>gb|PNX90864.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 401
Score = 47.4 bits (111), Expect(2) = 4e-08
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQAN 364
+L GLPEEYN+FVM+ Y + +KFRQELT+P+ SAN N
Sbjct: 187 VLEGLPEEYNSFVMLVYSRFETPTVEDVEALLLLQEVQFEKFRQELTNPSVSANVAHMN 245
Score = 37.7 bits (86), Expect(2) = 4e-08
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWD IHK+F + LKA+ARQ+R EL+ ++ +
Sbjct: 124 VWDTIHKYFNSVLKARARQLRSELKNTKKL 153
>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
Length = 1432
Score = 47.8 bits (112), Expect(2) = 5e-08
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQ 358
IL GL EE+N+FVMM Y + N DKFRQELT+P+ SAN Q
Sbjct: 188 ILDGLSEEFNSFVMMVYSRFDNPTVEDVEGLLMLQEAQFDKFRQELTNPSVSANVAQ 244
Score = 37.0 bits (84), Expect(2) = 5e-08
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWDKIHK+F + LK++ RQ+R EL+ ++ +
Sbjct: 125 VWDKIHKYFNSVLKSRIRQLRSELKNTKKL 154
>dbj|GAU44321.1| hypothetical protein TSUD_305020 [Trifolium subterraneum]
Length = 468
Score = 44.7 bits (104), Expect(2) = 5e-08
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSAN 349
IL GLPEE+N FVMM Y + +KFRQELT+P+ SAN
Sbjct: 412 ILDGLPEEFNPFVMMVYSRYDTPTVEDVEGLLMLQEAQFEKFRQELTNPSVSAN 465
Score = 40.0 bits (92), Expect(2) = 5e-08
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWDKIHKHF + LK++ RQ+R EL+ ++ +
Sbjct: 349 VWDKIHKHFNSVLKSRIRQLRFELKNTKKL 378
>gb|PNX89801.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 403
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + + +KFRQELT+P+ SAN
Sbjct: 188 ILEGLPEEFNSFVMMVYSRFESPTVEDVEALLLLQEVQFEKFRQELTNPSVSANIAHKES 247
Query: 368 QQS 376
+ S
Sbjct: 248 KNS 250
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWDKIHK+F + LK++ RQ+R EL+ ++ +
Sbjct: 125 VWDKIHKYFNSVLKSRTRQLRSELKNTKKL 154
>gb|PNX89792.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 403
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + + +KFRQELT+P+ SAN
Sbjct: 188 ILEGLPEEFNSFVMMVYSRFESPTVEDVEALLLLQEVQFEKFRQELTNPSVSANIAHKES 247
Query: 368 QQS 376
+ S
Sbjct: 248 KNS 250
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWDKIHK+F + LK++ RQ+R EL+ ++ +
Sbjct: 125 VWDKIHKYFNSVLKSRTRQLRSELKNTKKL 154
>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 1434
Score = 45.4 bits (106), Expect(2) = 1e-07
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + + +KFRQEL +P+ SAN + +
Sbjct: 189 ILEGLPEEFNSFVMMIYSRFESPTVEEIEALLLLQEAQFEKFRQELANPSVSANVAKVDT 248
Query: 368 QQSPQAMPS 394
+ ++ S
Sbjct: 249 NSNNPSVDS 257
Score = 37.7 bits (86), Expect(2) = 1e-07
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELRLSRNV 90
VWD IHK+F + LKA+ARQ+R EL+ ++ +
Sbjct: 126 VWDTIHKYFNSVLKARARQLRSELKNTKKL 155
>dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subterraneum]
Length = 1442
Score = 44.7 bits (104), Expect(2) = 2e-07
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +2
Query: 188 ILVGLPEEYNTFVMMYYVKPSNTDXXXXXXXXXXXXXXXDKFRQELTSPAPSANAVQANI 367
IL GLPEE+N+FVMM Y + +KFRQEL SP+ SA+ +
Sbjct: 188 ILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFRQELASPSVSAHVALTDS 247
Query: 368 QQSPQAMPSLHH 403
+ S ++ H
Sbjct: 248 KMSDNSVDQDSH 259
Score = 38.1 bits (87), Expect(2) = 2e-07
Identities = 15/25 (60%), Positives = 23/25 (92%)
Frame = +1
Query: 1 VWDKIHKHFYTHLKAKARQVRIELR 75
VWD+IHK+F++ L+A+ARQ+R EL+
Sbjct: 125 VWDQIHKYFHSVLQARARQLRSELK 149