BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00023936
         (585 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX57966.1| ribonuclease H [Trifolium pratense]                     69   4e-11
gb|KYP61721.1| Putative ribonuclease H protein At1g65750 family ...    69   1e-10
dbj|GAU30014.1| hypothetical protein TSUD_160990 [Trifolium subt...    67   2e-10
dbj|GAU48983.1| hypothetical protein TSUD_245740 [Trifolium subt...    69   5e-10
dbj|GAU24540.1| hypothetical protein TSUD_156530 [Trifolium subt...    68   1e-09
gb|PNX79078.1| ribonuclease H, partial [Trifolium pratense]            66   4e-09
gb|PNX94180.1| ribonuclease H [Trifolium pratense]                     65   6e-09
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    63   2e-08
gb|PNX74720.1| ribonuclease H, partial [Trifolium pratense]            61   4e-08
gb|PNX93234.1| ribonuclease H [Trifolium pratense]                     61   5e-08
dbj|GAU51939.1| hypothetical protein TSUD_417210 [Trifolium subt...    60   6e-08
dbj|GAU39987.1| hypothetical protein TSUD_211080 [Trifolium subt...    60   7e-08
gb|PNX71251.1| ribonuclease H, partial [Trifolium pratense]            60   3e-07
dbj|GAU50506.1| hypothetical protein TSUD_409810 [Trifolium subt...    59   4e-07
dbj|GAU10804.1| hypothetical protein TSUD_425290, partial [Trifo...    58   4e-07
gb|PNX87151.1| ribonuclease H, partial [Trifolium pratense]            57   5e-07
gb|PNX61255.1| ribonuclease H, partial [Trifolium pratense]            57   6e-07
gb|KHN31021.1| Putative ribonuclease H protein [Glycine soja]          57   1e-06
dbj|GAU45224.1| hypothetical protein TSUD_137960 [Trifolium subt...    57   1e-06
gb|PNY06444.1| ribonuclease H [Trifolium pratense]                     59   1e-06

>gb|PNX57966.1| ribonuclease H [Trifolium pratense]
          Length = 192

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FL GFYG      I++AE+  +LHG+ +CW+     + C+                YH +
Sbjct: 63  FLGGFYGVASMPSILYAEIMAVLHGLELCWNNGYTNLVCFSDSLQAVSLIKNGVSPYHTY 122

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N I  I+ L+        D T   GN    DFLAKLG ++    VI++ PP  M +LL 
Sbjct: 123 ANEIHKIRQLIGRDWNVSIDHTLREGN-ACADFLAKLGASSKSSLVILEAPPSDMSRLLL 181

Query: 356 ADALGHTLVR 385
           ADA G   VR
Sbjct: 182 ADAGGMMFVR 191


>gb|KYP61721.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 219

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FL GFYGFLG + ++  E+  LLHG+ +CW    + I CY              +++H++
Sbjct: 90  FLFGFYGFLGEASVLQTEILALLHGLHLCWDKGFRKIVCYSDSTLVVSLLQGPILMFHRY 149

Query: 185 TNVITLIQSLLNMGGEDL---TRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N +  I  LLN         T   GN    D LA++G   +   VI+   PM +  LL 
Sbjct: 150 GNQLMEIHQLLNCDWTCTVVHTLCEGNS-CADALARMGALGNDRVVILQEHPMTLSSLLL 208

Query: 356 ADALGHTLVR 385
           AD+LG    R
Sbjct: 209 ADSLGTVFQR 218


>dbj|GAU30014.1| hypothetical protein TSUD_160990 [Trifolium subterraneum]
          Length = 168

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FLKGFYG    S +++AE+   LHG+ +CW    + I CY                +H++
Sbjct: 39  FLKGFYGTATHSSVLYAEIMANLHGLDLCWVNGYRKIECYSDSLQAVALIRDGVSPHHQY 98

Query: 185 TNVITLIQSLLNMGG--EDLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQA 358
            N I  I+ LL        +  +       D LAK+G++ S  +V++D PP  +   L A
Sbjct: 99  ANEIQSIRHLLRRDWIVAVIHTLREGNACADVLAKMGSSESSAQVVLDEPPPQLSSALHA 158

Query: 359 DALGHTLVR 385
           DALG    R
Sbjct: 159 DALGVAFAR 167


>dbj|GAU48983.1| hypothetical protein TSUD_245740 [Trifolium subterraneum]
          Length = 1103

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
 Frame = +2

Query: 5    FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
            FLKGFYG    S +++AE+  +LHG+ +CW+   + I CY                +H  
Sbjct: 974  FLKGFYGTASQSSVLYAEIMAILHGLHLCWNNGYRSIVCYSDSLQAVSLIKDGVSHFHTF 1033

Query: 185  TNVITLIQSLLNMGG----EDLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLL 352
             N I  I+ LL        E + R  GN    D LAK G++ + P VIVD PP  +   L
Sbjct: 1034 ANEIHPIRQLLRRDWTIVIEHILR-EGN-ACADVLAKKGSSTNSPIVIVDSPPPELSNAL 1091

Query: 353  QADALGHTLVR 385
              DA G   VR
Sbjct: 1092 SVDARGVVFVR 1102


>dbj|GAU24540.1| hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
 Frame = +2

Query: 5    FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
            FLKGFYG    S +++AE+  +LHG+ +CW+   + I CY                +H  
Sbjct: 1018 FLKGFYGTASQSSVLYAEIMAILHGLHLCWNNGYRSIVCYSDSLQAVSLIKDGVSHFHTF 1077

Query: 185  TNVITLIQSLLNMGG----EDLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLL 352
             N I  I  LL        E + R  GN    D LAK G++ + P VIV+ PP      L
Sbjct: 1078 ANEIYTIHQLLRRDWTIVIEHILR-EGN-ACADILAKKGSSTNSPIVIVESPPPEPSNAL 1135

Query: 353  QADALGHTLVR 385
             ADA G   VR
Sbjct: 1136 SADARGIVFVR 1146


>gb|PNX79078.1| ribonuclease H, partial [Trifolium pratense]
          Length = 548

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FLKGFYG    S +++AE+  +LHG+ +CW    + IACY               ++HK 
Sbjct: 419 FLKGFYGTASQSSVLYAEIMAVLHGLELCWVNGFRNIACYSDSLQVVALIRDGVSLFHKF 478

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N I  I+ LL+       D T   GN +  D LAK+  + +   V++D P   +     
Sbjct: 479 ANEIQSIRHLLSRDWNVVVDHTLREGN-VCADVLAKMXASANSSLVVLDXPXSQLSSAXC 537

Query: 356 ADALGHTLVR 385
           ADA G   VR
Sbjct: 538 ADAWGVAFVR 547


>gb|PNX94180.1| ribonuclease H [Trifolium pratense]
          Length = 644

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FLKGFYG    S +++AE+  +LHG+ +CW    + I CY                +H  
Sbjct: 513 FLKGFYGAATLSSVLYAEIMAILHGLQLCWSNGYRSIVCYSDSLQAVSLIRDGVSHFHTF 572

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N I  I  LL        D T   GN    D LAKLG + + P V+++ PP  +   L 
Sbjct: 573 ANEIHNIHQLLXRDWNVVIDHTLREGN-ACADVLAKLGASLNSPMVVLETPPPQLSSSLG 631

Query: 356 ADALG 370
           ADA G
Sbjct: 632 ADAWG 636


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FL GF+G      I+H E+S L HG+ +CW +  K + C+               V+HK+
Sbjct: 106 FLHGFFGKNSRPCILHVEISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKY 165

Query: 185 TNVITLIQSLLNMGGEDLTR--VSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQA 358
            N+I  I+ LL        R  +       DFLAK G  +    VI++  P  +  +L A
Sbjct: 166 GNLIMAIKKLLRRDWVVSLRHTLCEGNAAADFLAKKGALSDTSLVILNEAPPDIAFVLLA 225

Query: 359 DALGHTLVR 385
           DA+G   VR
Sbjct: 226 DAVGVKFVR 234


>gb|PNX74720.1| ribonuclease H, partial [Trifolium pratense]
          Length = 177

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FL+GFYG    S I++ E+  +LHG+ +CW+   + + C+                 H  
Sbjct: 48  FLEGFYGTASQSNILYVEIMAVLHGLELCWNKGFRDVVCFSDSLLTVKLIKEGVSNCHSL 107

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N + +I+ LL        D T    NK   D LAKLG + + P V++ VP   ++ L+ 
Sbjct: 108 ANEVHIIRQLLGRVWRVVIDHTLREDNK-CADLLAKLGASANSPLVLLTVPHTELLNLID 166

Query: 356 ADALGHTLVR 385
            D  G   +R
Sbjct: 167 PDVRGVIFIR 176


>gb|PNX93234.1| ribonuclease H [Trifolium pratense]
          Length = 213

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           F+ GFYG      I+ AEL V+LHG+ +CW    + I+C+                +H+ 
Sbjct: 84  FISGFYGAATVQSILFAELMVVLHGLQICWESGFRRISCFSDSLQTVNLIWEGVSAHHRF 143

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N +  I+ L+    E   D T   GN    D LAK+G  ++ P V +  PP  +   L 
Sbjct: 144 ANEVFSIRQLIARDWEVVIDHTFRKGN-ACADMLAKIGALSTSPLVTISTPPSELSLPLL 202

Query: 356 ADALGHTLVR 385
           A+A G   +R
Sbjct: 203 ANAQGVGFIR 212


>dbj|GAU51939.1| hypothetical protein TSUD_417210 [Trifolium subterraneum]
          Length = 181

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           ++ GF+G LG + I+HAEL V+L G+ + W L+ K ++CY               V+H +
Sbjct: 53  WIHGFFGNLGVTNILHAELMVILKGLLLAWELNIKDLSCYSDSATAIKLITEPVDVWHHY 112

Query: 185 TNVITLIQSLLNMGGEDL---TRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
             ++  I+ +LN   +     T   GN    D+LAK G  N++    + +PP  +   L 
Sbjct: 113 AAILNSIKDILNRDWQVSIFHTFREGN-ACADYLAKHGAHNNIVFTTIAIPPAGLNLHLL 171

Query: 356 ADALG 370
           ADA G
Sbjct: 172 ADASG 176


>dbj|GAU39987.1| hypothetical protein TSUD_211080 [Trifolium subterraneum]
          Length = 192

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
 Frame = +2

Query: 8   LKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKHT 187
           L GFYG      I+ AEL  +LHG+ +CW    + I C+                +H+ +
Sbjct: 70  LSGFYGTTSVQSILFAELMAVLHGLQICWESGFRRITCFSDSLQTVNLIRDGVSTHHRSS 129

Query: 188 NVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQA 358
           N + +I  LL    E   D T   GN    D LAK+G  +  P V +  PP  +   L A
Sbjct: 130 NEVFIIHQLLANDWEVVIDHTFREGN-ACADVLAKMGAASDSPLVKISTPPCDLSMPLLA 188

Query: 359 DALG 370
           DA G
Sbjct: 189 DAQG 192


>gb|PNX71251.1| ribonuclease H, partial [Trifolium pratense]
          Length = 384

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FLKGFYG    + ++ AE+  +L+G+ +CW    + I C+                +H+ 
Sbjct: 255 FLKGFYGTASEASVLFAEILAVLNGLDLCWVNGFRNIVCFSDSLQAVTLIKEGVSPHHRF 314

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N I  I+ L++       + T   GN    D LAK+G +++L  VI++ PP  +   L 
Sbjct: 315 ANEIQSIRQLISKDWSVVIEHTLREGN-ACADCLAKMGASSNLSLVILNTPPTGLYLSLL 373

Query: 356 ADALGHTLVR 385
           ADA G    R
Sbjct: 374 ADAQGVAFAR 383


>dbj|GAU50506.1| hypothetical protein TSUD_409810 [Trifolium subterraneum]
          Length = 192

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   FLKGFYGFL-GSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHK 181
           +L GF GF+ GSS IM AEL  + HG+S+   +      CY              + YH 
Sbjct: 63  YLSGFSGFIQGSSDIMLAELYAIYHGLSLAKDMEINEFVCYSDSLHCINLITGPTLKYHV 122

Query: 182 HTNVITLIQSLLNMGGEDL--TRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
           H  +I  I+ LL+     L  T   GN+   DF AK G ++ +   I   PP  ++ LL+
Sbjct: 123 HAVLIQDIKELLSNINVSLCHTLREGNQCA-DFFAKHGASSDVDLFIHASPPEGILDLLR 181

Query: 356 ADALGHTLVR 385
           +DA G  L+R
Sbjct: 182 SDAAGTFLLR 191


>dbj|GAU10804.1| hypothetical protein TSUD_425290, partial [Trifolium subterraneum]
          Length = 174

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           ++ GF+G LG + I+HAEL  +L G+ + W L+ K ++CY               V+H +
Sbjct: 46  WIHGFFGNLGVTNILHAELMAILKGLLIAWELNIKDLSCYSDSATAIKLITEPVDVWHHY 105

Query: 185 TNVITLIQSLLNMGGEDL---TRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
             ++  I+ +LN   +     T   GN    D+LAK G  N++    + +PP  +   L 
Sbjct: 106 AAILNNIKDILNRDWQVSIFHTFREGN-ACADYLAKHGAHNNIVFTTIAIPPAGLNLHLL 164

Query: 356 ADALG 370
           ADA G
Sbjct: 165 ADASG 169


>gb|PNX87151.1| ribonuclease H, partial [Trifolium pratense]
          Length = 124

 Score = 56.6 bits (135), Expect = 5e-07
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FLKGFYG    S +++AE+  ++HG+ + W    + IACY                +H++
Sbjct: 21  FLKGFYGVASQSSVLYAEIMTIIHGLELSWANGFRNIACYSDSLQAVSLIRDGVSAFHQY 80

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLP 307
            N I  I+ LL+       + T   GN    DFLAK+G + +LP
Sbjct: 81  ANEIQKIRQLLSRDWNVVINHTFREGN-ACADFLAKMGASMNLP 123


>gb|PNX61255.1| ribonuclease H, partial [Trifolium pratense]
          Length = 146

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FLKGFYG    S +++AE+  +LHG+ +CW    + IACY               ++HK 
Sbjct: 40  FLKGFYGTASQSSVLYAEIMAVLHGLELCWVNGFRNIACYSDSLQAVALIRDGVSLFHKF 99

Query: 185 TNVITLIQSLLNMGGE---DLTRVSGNKLLLDFLAKLGTTNSLPRVIV 319
            N I  I+ LL        D T   GN    D LAK+G + +   V++
Sbjct: 100 ANEIQSIRQLLRRDWNVVVDHTLREGN-ACADVLAKMGASANSSLVVL 146


>gb|KHN31021.1| Putative ribonuclease H protein [Glycine soja]
          Length = 172

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FL GFYG +  S +++AE+  LL G+ +CW    K + CY                YH +
Sbjct: 43  FLLGFYGAVEISEVLYAEILALLKGLELCWEARYKKLVCYSDSLTMVNLVNNGVRSYHFY 102

Query: 185 TNVITLIQSLLNMG---GEDLTRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
            N+I     LL        + T   GN+   + L K+G  +S    ++  PP+ +++ L+
Sbjct: 103 NNMIMKFHQLLGRDWPCSLNQTLRKGNQ-CANVLVKMGVASSCLLEVIYAPPLMLLEPLR 161

Query: 356 ADA 364
           ADA
Sbjct: 162 ADA 164


>dbj|GAU45224.1| hypothetical protein TSUD_137960 [Trifolium subterraneum]
          Length = 188

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
 Frame = +2

Query: 5   FLKGFYGFL-GSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHK 181
           +L GF GF+ GSS I+ AEL  +  G+++  +++   + CY             ++ YH 
Sbjct: 60  YLSGFSGFIQGSSDILLAELFAIYKGLTLAKNMAIDELVCYSDSLHCINLIKAPNIKYHV 119

Query: 182 HTNVITLIQSLLNMGGEDL--TRVSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQ 355
           +  +I  I+ L++     L  T + GN    DFLAKLG ++     I+  PP   + +L+
Sbjct: 120 YAVLIQDIKELMSQSNITLCHTLIEGNSCA-DFLAKLGASSDSDLTILASPPKGFLDILR 178

Query: 356 ADALG 370
           +DA G
Sbjct: 179 SDATG 183


>gb|PNY06444.1| ribonuclease H [Trifolium pratense]
          Length = 547

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
 Frame = +2

Query: 5   FLKGFYGFLGSSIIMHAELSVLLHGISMCWHLS*K*IACYFXXXXXXXXXXXVDMVYHKH 184
           FL GFYG +    I+ AEL  +LHG+ +CW    + I C+                +H+ 
Sbjct: 418 FLLGFYGAVTVPSILLAELMAILHGLQICWENGYRRITCFSDSLQAVNLIRDGVSAHHRF 477

Query: 185 TNVITLIQSLLNMGGEDLTR--VSGNKLLLDFLAKLGTTNSLPRVIVDVPPMAMIQLLQA 358
            N +  I+ LL+   E + +  +       D LAK+G  +  P V +  PP+ +   L A
Sbjct: 478 ANEVVSIRQLLDRDWEIVVKHTLREGNACADVLAKMGALSDSPLVRLSSPPVDLAIPLLA 537

Query: 359 DALG 370
           DA G
Sbjct: 538 DAQG 541