BLASTX nr result

ID: Astragalus23_contig00022825 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00022825
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088229.1| protein CHROMATIN REMODELING 24 [Sesamum ind...    57   4e-06
gb|PIN09400.1| Transcription-coupled repair protein CSB/RAD26 (c...    56   5e-06

>ref|XP_011088229.1| protein CHROMATIN REMODELING 24 [Sesamum indicum]
          Length = 1138

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 21/53 (39%), Positives = 35/53 (66%)
 Frame = +2

Query: 350 NEDEKRKRLKFDPHLDDLKFTHQGIEYTMASKISSKLFPHQREGIKWLWNLHC 508
           +++E  +    + H+DDL  +   + Y +  K++  L+PHQREG+KWLW+LHC
Sbjct: 411 SDNESDEVTVLEDHVDDLTLSGPKLTYKLPRKLAKMLYPHQREGLKWLWSLHC 463


>gb|PIN09400.1| Transcription-coupled repair protein CSB/RAD26 (contains SNF2
           family DNA-dependent ATPase domain) [Handroanthus
           impetiginosus]
          Length = 997

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 22/53 (41%), Positives = 34/53 (64%)
 Frame = +2

Query: 350 NEDEKRKRLKFDPHLDDLKFTHQGIEYTMASKISSKLFPHQREGIKWLWNLHC 508
           +++E  +    D H+DD   +     Y +  KI++ L+PHQREG+KWLW+LHC
Sbjct: 270 SDEESDEVTMLDDHVDDFILSGPKWTYRLPGKIANMLYPHQREGLKWLWSLHC 322


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