BLASTX nr result

ID: Astragalus23_contig00022548 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00022548
         (458 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY03532.1| hypothetical protein L195_g026864 [Trifolium prat...    67   6e-10
gb|PNX94571.1| dynamin-related protein 4c-like [Trifolium pratense]    62   4e-08
ref|XP_013448909.1| hypothetical protein MTR_7g062650 [Medicago ...    56   1e-06
gb|PNX72142.1| pentatricopeptide repeat-containing protein at3g4...    56   4e-06

>gb|PNY03532.1| hypothetical protein L195_g026864 [Trifolium pratense]
          Length = 400

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
 Frame = -3

Query: 192 GIELFQ------HQLPKGSPLVLQHHEIVDVLHRKMIHKGNVQAAKMLIKWKDLPPKHDT 31
           G++LF       +  P+ S LVL     V V HRKMI++GNV+ AK+LIKWK LP KH T
Sbjct: 320 GLKLFTTKYVVAYSSPERSQLVLNQFAFVAVFHRKMINRGNVRDAKILIKWKTLPRKHGT 379

Query: 30  WKFSSLRTMM 1
             +SSLRT M
Sbjct: 380 CDYSSLRTRM 389


>gb|PNX94571.1| dynamin-related protein 4c-like [Trifolium pratense]
          Length = 551

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -3

Query: 120 VLHRKMIHKGNVQAAKMLIKWKDLPPKHDTWKFSSLRTMM 1
           +L RKMI +G+V  + +L+KWK LPPKH TWKFSSLRT M
Sbjct: 500 ILQRKMIQRGSVHVSLVLLKWKTLPPKHGTWKFSSLRTRM 539


>ref|XP_013448909.1| hypothetical protein MTR_7g062650 [Medicago truncatula]
 gb|KEH22936.1| hypothetical protein MTR_7g062650 [Medicago truncatula]
          Length = 183

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = -3

Query: 129 IVDVLHRKMIHKGNVQAAKMLIKWKDLPPKHDTWKFSSLRTMM 1
           ++ +LHRKMI+ G+V A K+LIKWK LP KH T  +SSLRT M
Sbjct: 129 VMAILHRKMINWGSVSALKVLIKWKTLPLKHGTCDYSSLRTRM 171


>gb|PNX72142.1| pentatricopeptide repeat-containing protein at3g49740-like protein,
           partial [Trifolium pratense]
          Length = 385

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = -3

Query: 129 IVDVLHRKMIHKGNVQAAKMLIKWKDLPPKHDTWKFSSLRTMM 1
           +V +LHRKMI++GNV+ AK+L KWK LP KH T   SSLRT M
Sbjct: 339 VVAILHRKMINRGNVRDAKVLSKWKVLPLKHGTCDCSSLRTRM 381


Top