BLASTX nr result
ID: Astragalus23_contig00022363
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00022363
(717 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU41450.1| hypothetical protein TSUD_98460 [Trifolium subte... 130 7e-38
gb|PNY17781.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 135 1e-32
gb|KYP68937.1| Retrotransposon-derived protein PEG10 [Cajanus ca... 129 3e-31
gb|PNY07310.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 130 7e-31
ref|XP_017423676.1| PREDICTED: uncharacterized protein LOC108332... 107 5e-29
ref|XP_014511429.1| uncharacterized protein LOC106770116 [Vigna ... 120 1e-27
gb|PNX79664.1| hypothetical protein L195_g035651 [Trifolium prat... 117 1e-26
ref|XP_017426291.1| PREDICTED: uncharacterized protein LOC108334... 116 6e-26
gb|KYP76287.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 87 1e-25
ref|XP_006574291.1| PREDICTED: uncharacterized protein LOC102661... 79 2e-24
gb|PNX92353.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 112 2e-24
gb|KYP42639.1| Retrovirus-related Pol polyprotein from transposo... 111 2e-24
gb|KYP61806.1| hypothetical protein KK1_016317 [Cajanus cajan] 96 2e-22
dbj|GAU26773.1| hypothetical protein TSUD_317710 [Trifolium subt... 105 2e-22
gb|PNX92970.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 105 5e-22
gb|KHN07600.1| Retrovirus-related Pol polyprotein from transposo... 103 1e-21
gb|PNX98954.1| retrotransposon-related protein, partial [Trifoli... 103 1e-21
dbj|GAU45274.1| hypothetical protein TSUD_99960 [Trifolium subte... 102 3e-21
gb|PNX92469.1| hypothetical protein L195_g015607 [Trifolium prat... 102 3e-21
dbj|GAU40605.1| hypothetical protein TSUD_28110 [Trifolium subte... 102 4e-21
>dbj|GAU41450.1| hypothetical protein TSUD_98460 [Trifolium subterraneum]
Length = 1385
Score = 130 bits (326), Expect(3) = 7e-38
Identities = 83/191 (43%), Positives = 100/191 (52%), Gaps = 19/191 (9%)
Frame = +2
Query: 200 RFEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTES----STSKNA 367
R EVLAQQP LSQAAGLARL E+K+ DLLRL R K P++P T S T++ +T N+
Sbjct: 199 RREVLAQQPVDLSQAAGLARLHEEKIQDLLRLARPKQPFTPWNTSSSTKTFAAPTTKPNS 258
Query: 368 ----TSXXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXX 535
S RFRQL AAE+ADRREKGLCFN DERFS++HRCKAR
Sbjct: 259 EITKNSPPPPLLPTPQPKTRFRQLYAAELADRREKGLCFNCDERFSRNHRCKARFLLLIA 318
Query: 536 XXXXXXXXXXXXXXXVWPIV-----------DPEAEPTQFALHTMTGAHTAHTFRVQGHI 682
+ EA+ Q + H M+G TA T +V G I
Sbjct: 319 VDNDEEEKGGPEAEIGESEIPTDSLLALLGTQEEAQLAQLSYHAMSGIQTAQTIKVLGKI 378
Query: 683 DDEPVHILVDG 715
VH+LVDG
Sbjct: 379 AQHSVHVLVDG 389
Score = 39.3 bits (90), Expect(3) = 7e-38
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 81 YQWMHSNGQITSWTQFLTA 137
YQW HSNG+I SWTQFL A
Sbjct: 120 YQWKHSNGEIVSWTQFLRA 138
Score = 37.4 bits (85), Expect(3) = 7e-38
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1
Query: 136 HRIVGLSTHNLLSCFVSGLKPEI 204
+RIVGLS +LLSCFVSGLK EI
Sbjct: 176 NRIVGLSPQDLLSCFVSGLKVEI 198
>gb|PNY17781.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1478
Score = 135 bits (340), Expect = 1e-32
Identities = 103/296 (34%), Positives = 127/296 (42%), Gaps = 64/296 (21%)
Frame = +2
Query: 20 VFKISQFFAYHRTPETERITVSV------------------DAQQWPN------------ 109
+FKISQFF YH TPE ERITV+ WP
Sbjct: 56 IFKISQFFTYHNTPEEERITVASFYLDGPALAWYQWMYRNGQIVSWPQVLQALELRFAPT 115
Query: 110 ------------HLLDTVSHRIASWGSLRTIY*VALSRV-----------SNRRFEVLAQ 220
H TV+ ++ + SL V LS S R EVLAQ
Sbjct: 116 AYDDPRGKLFKLHQTTTVASYLSDFESLANRI-VGLSPPDLLSCFISGLRSEIRREVLAQ 174
Query: 221 QPSSLSQAAGLARLQEDKVNDLLRLTRQKP--PWSPAQTPSRTESSTSKNATSXXXXXXX 394
QP+SL+QAA LARLQE+K+ DLLRL + + PWS + + SS N
Sbjct: 175 QPTSLTQAAALARLQEEKIQDLLRLAKPRTTAPWS-----NPSSSSPRSNPAPTTASLLP 229
Query: 395 XXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXXXXXXX 574
R+RQLS EM +RREKGLCFN DERFS++HRCKAR
Sbjct: 230 TPANHPRYRQLSPTEMNERREKGLCFNCDERFSRTHRCKARFLLFIADEDEELAGLDPGE 289
Query: 575 XXVWPIVDP---------EAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
P DP E Q + H ++G +A T RV G + V +LVDG
Sbjct: 290 TDPPPAADPLPDVSGLVEEFHSAQLSYHALSGVQSAQTIRVPGRVGAHSVRVLVDG 345
>gb|KYP68937.1| Retrotransposon-derived protein PEG10 [Cajanus cajan]
Length = 507
Score = 129 bits (325), Expect = 3e-31
Identities = 100/295 (33%), Positives = 127/295 (43%), Gaps = 63/295 (21%)
Frame = +2
Query: 20 VFKISQFFAYHRTPETERITVS---VDAQ-----QWP---------NHLLDTVSHRIASW 148
+FKI+QFF YH TPE ERITV+ +D QW HLL + R A
Sbjct: 78 IFKITQFFDYHNTPEEERITVASFYLDGAALAWFQWMYRNGQIHSWQHLLQALETRFAPT 137
Query: 149 G--------------SLRTIY*VALSRVSNR---------------------RFEVLAQQ 223
+ + + V+NR R EV+AQQ
Sbjct: 138 AFDDPRGRLFKLTQTTTVSAFLTEFEAVANRVTGLSPQFLLSCFIFGLKPEIRREVIAQQ 197
Query: 224 PSSLSQAAGLARLQEDKVNDLLRLTRQKP--PWS--PAQTPSRTESSTSKNATSXXXXXX 391
P SL+ A GLARL E+K+ DL R+ R KP PWS P + A
Sbjct: 198 PPSLTHAVGLARLHEEKLQDLSRIQRAKPGAPWSSPPFSRTFTPFAPPQTIAPKPLPPLL 257
Query: 392 XXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXXXXXX 571
RFRQL+ AEMADRREKGLCFN D+++S+SHRC AR
Sbjct: 258 PSPPPKTRFRQLTEAEMADRREKGLCFNCDQKYSRSHRCPARFLLLIAEDDDPPSAPDLD 317
Query: 572 XXXVWP---IVDP----EAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
P +VDP P Q +LH ++G T R+ G I P+ +LVDG
Sbjct: 318 FPAADPDPSLVDPSTVTSVHPAQISLHALSGTGAPKTLRLTGQIAHHPIRVLVDG 372
>gb|PNY07310.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
gb|PNY07311.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1494
Score = 130 bits (327), Expect = 7e-31
Identities = 102/292 (34%), Positives = 133/292 (45%), Gaps = 55/292 (18%)
Frame = +2
Query: 5 NAPALVFKISQFFAYHRTPETERITVS--------VDAQQWP---------NHLLDTVSH 133
+A +FKISQFF YH+TPE +RIT++ + QW N L +
Sbjct: 69 DANGWIFKISQFFTYHQTPEEDRITIASFYLDGPALAWYQWMYRNSQIVSWNQFLRALET 128
Query: 134 RIASW------GSLRTI--------Y*VALSRVSNR---------------------RFE 208
R A G+L + Y ++NR R E
Sbjct: 129 RFAPTAYDDPKGNLFKLTQSGSVNDYLTEFESLANRIVGLSPLDLLSCFISGLKVEIRRE 188
Query: 209 VLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQT-PSRTESSTSKNATSXXXX 385
VLAQQP+SLSQAAGLARLQEDK+ D ++ +R K SPA T PSR +
Sbjct: 189 VLAQQPNSLSQAAGLARLQEDKIQDQIKASRSK--LSPAYTAPSRPNFNLPGRPAPGLLP 246
Query: 386 XXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXXXX 565
RFR LS E+A+RREKGLCFN D+++SK HRC R
Sbjct: 247 APPSKP---RFRHLSEPELAERREKGLCFNCDQKWSKQHRCGGRTFLLLADEEDEEVDPS 303
Query: 566 XXXXXVWPIVDP--EAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
+ P + Q +LH + G+H TFRV+G I +PV+ILVDG
Sbjct: 304 QLESTIDIDTSPPDDTPQAQLSLHALAGSHATDTFRVEGQILKQPVNILVDG 355
>ref|XP_017423676.1| PREDICTED: uncharacterized protein LOC108332889 [Vigna angularis]
Length = 556
Score = 107 bits (268), Expect(3) = 5e-29
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Frame = +2
Query: 200 RFEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQ--TPSRTESSTSKNATS 373
R EVL+QQP +LSQA+GLARL E+K DL RL RQ+ P T S T
Sbjct: 173 RREVLSQQPQTLSQASGLARLHEEKFQDLTRLIRQRSGPGPLSLLTRSPTTPLVPLVPLK 232
Query: 374 XXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKAR--------XXXX 529
RF+QL+ AEMADRRE+GLCFN D++FS++HRC AR
Sbjct: 233 QLPPLLPAPPPRTRFKQLTEAEMADRRERGLCFNCDQKFSRNHRCPARYMLLVAEEDNDS 292
Query: 530 XXXXXXXXXXXXXXXXXVWPIVDPEAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILV 709
V P++ + Q L+ ++G T RV G ID V +LV
Sbjct: 293 CKSSLHAPILEPNPPDPVSPVITDDPNQAQLCLNALSGFGAPETLRVSGQIDQFQVTVLV 352
Query: 710 DG 715
DG
Sbjct: 353 DG 354
Score = 37.4 bits (85), Expect(3) = 5e-29
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 136 HRIVGLSTHNLLSCFVSGLKPEI 204
+RIVGL LLSCF+SGLKPEI
Sbjct: 150 NRIVGLQPQFLLSCFISGLKPEI 172
Score = 31.6 bits (70), Expect(3) = 5e-29
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 81 YQWMHSNGQITSWTQFLTA 137
+QWM+ NGQI SW Q L A
Sbjct: 94 FQWMYRNGQIHSWPQLLQA 112
>ref|XP_014511429.1| uncharacterized protein LOC106770116 [Vigna radiata var. radiata]
Length = 851
Score = 120 bits (302), Expect = 1e-27
Identities = 96/299 (32%), Positives = 124/299 (41%), Gaps = 67/299 (22%)
Frame = +2
Query: 20 VFKISQFFAYHRTPETERITVS---VDAQ-----QWP---------NHLLDTVSHRIA-- 142
+FKI+QFF YH TPE ERI V+ +D QW HLL + R A
Sbjct: 101 IFKINQFFDYHNTPEEERIIVASFYLDGAALAWFQWMYRNGQILSWTHLLQALETRFAPT 160
Query: 143 ------------SWGSLRTIY*VALSRVSNR---------------------RFEVLAQQ 223
S S + Y +NR R EV+AQQ
Sbjct: 161 AFEDPRGKLFKLSQTSSVSAYLNEFEATANRVTGXSPPFLLSCFLSGLKSEXRREVVAQQ 220
Query: 224 PSSLSQAAGLARLQEDKVNDLLRLTRQKP--PWSPAQTPSRTESSTSKNATSXXXXXXXX 397
P +LS A GLARLQE+K+ DL R+ R KP W + + +
Sbjct: 221 PQTLSLAVGLARLQEEKLWDLSRVQRVKPLSSWPTSSLTRTVPTPIQQPPPKPLPPILPS 280
Query: 398 XXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXXXXXXXX 577
R+RQL+ AEMADR EKGLCFN D+++S+SHRC AR
Sbjct: 281 PSPKTRYRQLTEAEMADRHEKGLCFNCDQKYSRSHRCPARFLLLIAEEDDSTGGLASNPT 340
Query: 578 XVWPIVDPEAE-------------PTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
P DP + P Q +LH ++G T R+ GHI P+ +LVDG
Sbjct: 341 SFDP--DPRTDEQPPQPIDLLLDLPAQISLHALSGIGGPETLRLTGHIGQHPIRVLVDG 397
>gb|PNX79664.1| hypothetical protein L195_g035651 [Trifolium pratense]
Length = 536
Score = 117 bits (293), Expect = 1e-26
Identities = 90/303 (29%), Positives = 129/303 (42%), Gaps = 65/303 (21%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVS---VDAQQWPNHLLDTVSHRIASWGSLR---- 160
T+ +FKISQFF YH+TPE ERIT++ +D + + +IASW
Sbjct: 61 TDTHGWIFKISQFFDYHQTPEEERITIASFYLDGAALAWYQWMYRNRQIASWAQFLEKLE 120
Query: 161 ------------------------TIY*VALSRVSNR---------------------RF 205
+ Y ++NR R
Sbjct: 121 TRFAPTAFDDPRGNLFKLTQSTTVSAYLTEFEALANRLEGLSDVDLLSCFISGLKSDVRR 180
Query: 206 EVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTE-----SSTSKNAT 370
EV+AQQP+S+SQAAGLARLQE+K+ D+ R +R W P + +S +KN +
Sbjct: 181 EVVAQQPTSISQAAGLARLQEEKLQDIARASRPTSSWQPPSVARPIQKAPEVTSPAKNTS 240
Query: 371 SXXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXX 550
RFR LS E+ ++REKGLCFN D+++ K H+C AR
Sbjct: 241 G----LLPTPPAKPRFRHLSGPELDEQREKGLCFNCDKKWPKQHKCGAR-VFVMLADNDD 295
Query: 551 XXXXXXXXXXVWPIVDP--------EAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHIL 706
+ +DP E + Q +L ++G A T R+ G+I PV +L
Sbjct: 296 SFSTTAAEELLTDSIDPSGVLTPQSEVQAAQLSLFALSGVPAADTIRILGYIGSHPVRVL 355
Query: 707 VDG 715
VDG
Sbjct: 356 VDG 358
>ref|XP_017426291.1| PREDICTED: uncharacterized protein LOC108334872 [Vigna angularis]
Length = 756
Score = 116 bits (290), Expect = 6e-26
Identities = 95/302 (31%), Positives = 130/302 (43%), Gaps = 70/302 (23%)
Frame = +2
Query: 20 VFKISQFFAYHRTPETERITV--------SVDAQQWP---------NHLLDTVSHRIASW 148
+FKI+QFF YH TPE ERITV ++ QW LL + R A
Sbjct: 81 IFKITQFFDYHNTPEEERITVASFYLDGAALALFQWMYRNGQLHSWQQLLQALETRFAPT 140
Query: 149 ------GSLRTI--------Y*VALSRVSNR---------------------RFEVLAQQ 223
G L + + ++NR R EV+AQQ
Sbjct: 141 AFDDPKGKLFKLAQTTTVSDFLTEFESIANRVAGLPPSFLLSCFISGLKPEIRREVVAQQ 200
Query: 224 PSSLSQAAGLARLQEDKVNDLLRLTRQKP--PWSPAQT----PSRTESSTSKNAT----- 370
P +LS A GLARLQE+K+ DL R+ + K PW P S+T+S T+K+
Sbjct: 201 PPTLSHAVGLARLQEEKIWDLNRVPKPKSVSPWPPPSINRTITSQTQSQTTKHLPPLLTS 260
Query: 371 ---SXXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKAR----XXXX 529
R+RQL+ AEMADRREKGLCFN ++++S+SHRC AR
Sbjct: 261 PIEKSLPPLLTPPPPKTRYRQLTEAEMADRREKGLCFNCEQKYSRSHRCPARFLFFIAEE 320
Query: 530 XXXXXXXXXXXXXXXXXVWPIVDPEAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILV 709
+ P+ D + Q +LH ++G T R+ G I + +LV
Sbjct: 321 ADSVGEGDLEMPTFDGVLEPMGDSPNQSAQISLHALSGTGAPETLRLMGQIGLHQISVLV 380
Query: 710 DG 715
DG
Sbjct: 381 DG 382
>gb|KYP76287.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 712
Score = 86.7 bits (213), Expect(4) = 1e-25
Identities = 62/177 (35%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Frame = +2
Query: 206 EVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTESSTSKNATSXXXX 385
EV A +P+SL LA+LQEDK+ + R KP A TPS + +
Sbjct: 131 EVQALRPASLDHTTQLAKLQEDKIEERRRAFFPKPQ---ALTPSSHTALPTPQPR----- 182
Query: 386 XXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXXXX 565
FR+LS +MA RREKGLC+N DE F+ SHRCK +
Sbjct: 183 --------VNFRRLSPDDMAARREKGLCYNCDELFTPSHRCKGKFFLLTTDDPIVDDFTP 234
Query: 566 XXXXXVWPIVDP-------EAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
++DP + P+Q +LH TG + T R+QG I + PV ILVDG
Sbjct: 235 DPTL----VLDPPPPEPVSDDTPSQVSLHAFTGGVGSSTIRLQGQIRNNPVSILVDG 287
Score = 36.2 bits (82), Expect(4) = 1e-25
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 20 VFKISQFFAYHRTPETERITVS 85
+FKISQFF YH TP++ER+ V+
Sbjct: 17 IFKISQFFDYHNTPKSERLQVA 38
Score = 31.2 bits (69), Expect(4) = 1e-25
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 75 SRYQWMHSNGQITSWTQFLTA 137
S YQWM+ NGQI +W FL A
Sbjct: 48 SWYQWMYWNGQIQTWFGFLRA 68
Score = 31.2 bits (69), Expect(4) = 1e-25
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 136 HRIVGLSTHNLLSCFVSGLKPEI 204
+RIVGL L+CF+SGL PEI
Sbjct: 106 NRIVGLPAPFALNCFISGLTPEI 128
>ref|XP_006574291.1| PREDICTED: uncharacterized protein LOC102661730 [Glycine max]
Length = 1588
Score = 79.3 bits (194), Expect(4) = 2e-24
Identities = 60/185 (32%), Positives = 82/185 (44%), Gaps = 13/185 (7%)
Frame = +2
Query: 200 RFEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTESSTSKNATSXX 379
R EV A P S+ QAAGLARLQ +KV D R +PP +P P + S A +
Sbjct: 319 RREVQAHHPLSMVQAAGLARLQAEKVLDQRPSPRSRPP-NPTPFPPQLGPPPSLPAPTLP 377
Query: 380 XXXXXXXXXXX--------RFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXX 535
+++S EMA RREKGLCFN DE++ + H+C +R
Sbjct: 378 PLLNPPPPPRPPTTPMSTPTLKRVSPDEMALRREKGLCFNCDEKYHRGHKCSSRFFILIS 437
Query: 536 XXXXXXXXXXXXXXXV-WPIVDP----EAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVH 700
P DP + PTQ +L+++ G T R G + +P+
Sbjct: 438 DDLEPIPSHIPIPDLTHHPPPDPPDNLDLYPTQISLNSLAGHIAPETLRFVGQLSGQPML 497
Query: 701 ILVDG 715
ILVDG
Sbjct: 498 ILVDG 502
Score = 35.8 bits (81), Expect(4) = 2e-24
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2
Query: 20 VFKISQFFAYHRTPETERITVS 85
+FKI+QFF YH TPE +++TV+
Sbjct: 207 IFKINQFFEYHSTPEQDKLTVA 228
Score = 34.7 bits (78), Expect(4) = 2e-24
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 139 RIVGLSTHNLLSCFVSGLKPEI 204
R+VG+S LLSCF+SGL PEI
Sbjct: 297 RVVGISPPLLLSCFISGLSPEI 318
Score = 31.2 bits (69), Expect(4) = 2e-24
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 66 RSASRYQWMHSNGQITSWTQFLTA 137
R+ + YQWM +N TSW+ F+ A
Sbjct: 235 RALAWYQWMKANNHFTSWSSFIQA 258
>gb|PNX92353.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1502
Score = 112 bits (279), Expect = 2e-24
Identities = 91/293 (31%), Positives = 126/293 (43%), Gaps = 55/293 (18%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVSVDAQQWP-----------------NHLLDTVS 130
++A +FKISQFF +H TPE +R+T++ + P + LL+ +
Sbjct: 84 SDAMGWIFKISQFFEFHATPEADRLTIASFYMEGPALGWYQWMARNGQLTSWHGLLNAIE 143
Query: 131 HRIASW------GSLRTI--------Y*VALSRVSNR---------------------RF 205
R A GSL + Y A ++NR R
Sbjct: 144 ARFAPSQYDDPKGSLFKLTQKGSVSEYLSAFETLANRIVGLQPPFLLSCFISGLIPEIRR 203
Query: 206 EVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTESSTSKNATSXXXX 385
EV+A QP +L QAA LARLQE+K ND R R + +P SSTS+ T
Sbjct: 204 EVMALQPLNLIQAASLARLQEEKFNDARRALRNRGILNPTPLQQIPPSSTSR--TPLALL 261
Query: 386 XXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKAR-XXXXXXXXXXXXXXX 562
F++LS EMA RREKGLCFN DE+F H+C +R
Sbjct: 262 PPPPKPSPPTFKRLSPTEMAQRREKGLCFNCDEKFRPGHKCSSRFFILITDDDIDPDLTH 321
Query: 563 XXXXXXVWPIVDPEAEPT--QFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
P +P+ EP+ Q + H ++G T R+ G I + VHIL+DG
Sbjct: 322 IDPNSAAQPDPEPDLEPSQAQISFHALSGHLAPETLRLAGRIAHQRVHILMDG 374
>gb|KYP42639.1| Retrovirus-related Pol polyprotein from transposon 297 family
[Cajanus cajan]
Length = 894
Score = 111 bits (278), Expect = 2e-24
Identities = 98/302 (32%), Positives = 132/302 (43%), Gaps = 64/302 (21%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVS---VDAQ-----QWP---------NHLLDTVS 130
++A +FKI+QFF YH TPE E ITV+ +D QW N +L +
Sbjct: 63 SDALGWIFKITQFFEYHNTPEEECITVASFYLDGSALAWFQWMYRNGQIHSWNQMLQALE 122
Query: 131 HRIASW------GSLR--------TIY*VALSRVSNR---------------------RF 205
+R A G L T Y ++NR R
Sbjct: 123 NRFAPTAFDNPRGKLFKLTQSFSVTSYLTEFESLANRIVGLQPSFLLSCFISGLKPELRR 182
Query: 206 EVLAQQPSSLSQAAGLARLQEDKVNDLLRLTR--QKPPWSPAQTPSRTESSTSKNAT-SX 376
+V+A QPSSLSQA G ARL E+K+ D R R Q P WS A SRT S S +
Sbjct: 183 DVIAHQPSSLSQAVGYARLHEEKLFDSSRTHRPSQSPRWS-APPVSRTFSPLSPSPPPKS 241
Query: 377 XXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKAR---------XXXX 529
RF+QL+ AEMAD+REKGLCFN D++FS++HRC AR
Sbjct: 242 LPPLLPPPPPKTRFKQLTEAEMADKREKGLCFNCDQKFSRNHRCLARYFLLIVDEDESPP 301
Query: 530 XXXXXXXXXXXXXXXXXVWPIVDPEAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILV 709
V ++D + Q +L+ ++G+ T T R+ G + V +LV
Sbjct: 302 PDSDGGSDLGAGSDPKLVEELLDLSPDSAQLSLNALSGSGTPETLRIVGLLAQYQVRVLV 361
Query: 710 DG 715
DG
Sbjct: 362 DG 363
>gb|KYP61806.1| hypothetical protein KK1_016317 [Cajanus cajan]
Length = 287
Score = 95.9 bits (237), Expect(3) = 2e-22
Identities = 56/112 (50%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Frame = +2
Query: 200 RFEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWS-PAQTPSRTESSTSKN---- 364
R EV+AQQP SL+ A GLARLQE++++DL R R +P S PA +RT +S
Sbjct: 77 RREVIAQQPQSLATAVGLARLQEERLSDLSRFQRPRPASSWPAPLLTRTITSAPPPQQPT 136
Query: 365 -ATSXXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKAR 517
A RFRQL+ AEMADRREKGLCFN D+++S+SHRC AR
Sbjct: 137 AAPPRAPPLLPTPAPKTRFRQLTEAEMADRREKGLCFNCDQKYSRSHRCPAR 188
Score = 33.9 bits (76), Expect(3) = 2e-22
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 136 HRIVGLSTHNLLSCFVSGLKPEI 204
+R+ GLS LLSCF+SGL+PEI
Sbjct: 54 NRVTGLSPPFLLSCFLSGLQPEI 76
Score = 25.0 bits (53), Expect(3) = 2e-22
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 90 MHSNGQITSWTQFLTA 137
M+ NGQI SWT L A
Sbjct: 1 MYRNGQILSWTHLLQA 16
>dbj|GAU26773.1| hypothetical protein TSUD_317710 [Trifolium subterraneum]
Length = 1395
Score = 105 bits (263), Expect = 2e-22
Identities = 92/301 (30%), Positives = 123/301 (40%), Gaps = 63/301 (20%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVSV-----DAQQWPNH------------LLDTVS 130
T+A +FKISQFF YH TPETER+TV+ A W + LL +
Sbjct: 62 TDAMGWIFKISQFFDYHNTPETERLTVASFYMDGPALTWYQYMYRNGHINSWFGLLQALE 121
Query: 131 HRIA---------------SWGSLRTIY*VALSRVSNR---------------------R 202
R A GSL Y R++NR R
Sbjct: 122 ARFAPSYYDDPSQALFKLTQRGSLNQ-YLTEFERLANRIIGLPQPFILNCFISGLAPEIR 180
Query: 203 FEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQK---------PPWSPAQTPSRTESST 355
EV A QP++LS A LA+LQEDK++D R + K PP P S T+
Sbjct: 181 REVQALQPATLSLATALAKLQEDKIDDRRRNFKTKQHTSSSSTTPPLLPTPLSSTTQPPN 240
Query: 356 SKNATSXXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXX 535
+ + +FR+LS+ +MA RREKGLC+N DE F H+CK R
Sbjct: 241 NPSRV--------------QFRKLSSEDMASRREKGLCYNCDETFIPGHKCKGRLYLLVS 286
Query: 536 XXXXXXXXXXXXXXXV-WPIVDPEAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVD 712
+ I P Q + H++ G+ T R+ G I + PV IL+D
Sbjct: 287 DEPDPAESPPSQTPDLDHSIESPPDLEGQISFHSLAGSSATATLRIIGQIANHPVTILID 346
Query: 713 G 715
G
Sbjct: 347 G 347
>gb|PNX92970.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 1483
Score = 105 bits (261), Expect = 5e-22
Identities = 92/300 (30%), Positives = 123/300 (41%), Gaps = 62/300 (20%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVSVDAQQWPNHLLDTVSHR---IASW-GSLRTI- 166
++A +FKISQFF YH+TPE ER+TV+ + P HR I +W G L+ +
Sbjct: 67 SDAMGWIFKISQFFDYHQTPEEERLTVASFYMEGPALSWFQWMHRNGQITTWFGLLQALE 126
Query: 167 --------------------------Y*VALSRVSNR---------------------RF 205
Y R++NR R
Sbjct: 127 TRFAPSYYDDPSSSLFKLTQRTTVNEYLAEFERLANRIVGLQPPFLLSCFISGLSPEIRR 186
Query: 206 EVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKP---PWSPAQTPSRTESSTSKNAT-S 373
EV A +P SL+QA LA+LQEDK+ D R + KP S + P ST T +
Sbjct: 187 EVQALRPMSLTQATALAKLQEDKIADRRRFFKNKPNSQQISSSSNPFGPPPSTPPLPTPN 246
Query: 374 XXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXX 553
FR+LS EMA RREKGLC+N DE F+ H+C+ R
Sbjct: 247 TLPLLPPPKPNRPNFRKLSPEEMASRREKGLCYNCDETFTPQHKCRGRFFLLVTEEPMES 306
Query: 554 XXXXXXXXXVWPIVDPEAEPT------QFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
P E PT Q +LH ++G A T R+ G I + PV +L+DG
Sbjct: 307 PPDLIDFTE--PDPPNETTPTDAAIDAQISLHALSGCTVASTIRLMGCIANHPVTVLIDG 364
>gb|KHN07600.1| Retrovirus-related Pol polyprotein from transposon opus, partial
[Glycine soja]
Length = 466
Score = 103 bits (256), Expect = 1e-21
Identities = 87/264 (32%), Positives = 122/264 (46%), Gaps = 33/264 (12%)
Frame = +2
Query: 20 VFKISQFFAYHRTPETERITVSV-----DAQQWPNHLLDTVSHRIASW-GSLRTIY*V-- 175
+FKISQ F Y TPE ERITV+ A W + + I SW G L+ +
Sbjct: 60 IFKISQLFEYQNTPEEERITVAFFYLDGAALSWYQWMFR--NGFITSWSGFLQALESRFA 117
Query: 176 ---------ALSRVSNR----RFEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPW 316
AL +++ R R EVLA QP SL QA LA+LQEDK+ D RQ PP
Sbjct: 118 PSYYDDPKGALFKLTQRGTDIRREVLALQPISLPQAMALAKLQEDKIRD----RRQAPPR 173
Query: 317 SPAQTPSRTESSTSKNATSXXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSK 496
+ TPS + + ++ S + Q + EMA RREKGLC+N +E++S
Sbjct: 174 NH-NTPSASYAPPTRKPHST-------------YVQRTPDEMALRREKGLCYNCEEKWSS 219
Query: 497 SHRCKARXXXXXXXXXXXXXXXXXXXXXVWPIVDP------------EAEPTQFALHTMT 640
+HRCK R + P+ +P E P +LH ++
Sbjct: 220 THRCKGRVLLFIADNPSPTSDEPISEPPLLPLPEPTPACPPDLDSTSELTPPHVSLHALS 279
Query: 641 GAHTAHTFRVQGHIDDEPVHILVD 712
G ++ TFR+ G I+ P+ IL+D
Sbjct: 280 GLPSSETFRLVGIINHSPLTILID 303
>gb|PNX98954.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 957
Score = 103 bits (258), Expect = 1e-21
Identities = 88/302 (29%), Positives = 128/302 (42%), Gaps = 64/302 (21%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVS---VDAQ-----QWPNHLLDTVSHRIASW-GS 154
++A +FKISQFF YH+TPE ER+TV+ ++ Q QW + ++++ +W G
Sbjct: 65 SDAMGWIFKISQFFDYHQTPEEERLTVASFYMEGQALSWFQWMHR-----NNQLNTWFGF 119
Query: 155 LRTI---------------------------Y*VALSRVSNR------------------ 199
L+ + Y R++NR
Sbjct: 120 LQALETRFAPSFYDEPSSALFKLVQRSSVNNYLTEFERLANRIVGLPQPFLLSCFISGLS 179
Query: 200 ---RFEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQ-TPSRTESSTSKNA 367
R EV A +P +L QA LA+LQEDK++D RL + K S TP + S+
Sbjct: 180 PEIRREVQALRPVTLCQATALAKLQEDKIDDRRRLFKSKNSTSTLNPTPIASSSAPPLLP 239
Query: 368 TSXXXXXXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXX 547
T FR+LS EMA RREKGLC+N DE F+ H+C+ R
Sbjct: 240 TPKPNNKV-------NFRKLSPEEMATRREKGLCYNCDETFTPLHKCRGRFFLLVADDDC 292
Query: 548 XXXXXXXXXXXVWPIVDPEAEPT------QFALHTMTGAHTAHTFRVQGHIDDEPVHILV 709
+ P P PT Q + H M+G+ T R+ G + + PV +L+
Sbjct: 293 DPDDIPDPPPDIDPTPPPPTLPTTEPSEAQISFHAMSGSADPATIRISGFLANHPVTVLI 352
Query: 710 DG 715
DG
Sbjct: 353 DG 354
>dbj|GAU45274.1| hypothetical protein TSUD_99960 [Trifolium subterraneum]
Length = 970
Score = 102 bits (255), Expect = 3e-21
Identities = 87/297 (29%), Positives = 126/297 (42%), Gaps = 59/297 (19%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVSVDAQQWPNHLLDTVSHR---IASW-GSLRTI- 166
T+A +FKISQFF +H+T E ER+TV+ + P H+ I +W G L+ +
Sbjct: 63 TDAMGWIFKISQFFDFHQTTEEERLTVASFYMEGPALSWYQWMHKNNQINTWFGFLQALE 122
Query: 167 --------------------------Y*VALSRVSNR---------------------RF 205
Y + R++NR R
Sbjct: 123 MRFAPSYYDEPSSALFKLVQKTTVNSYLIKFERLTNRIVGLPQPFLLSCFISGLSPEIRR 182
Query: 206 EVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTESSTSKNATSXXXX 385
EV A +P SL+QA LA+LQEDK+ D RL + K + A T + +S N +
Sbjct: 183 EVQALRPLSLTQATALAKLQEDKIEDRRRLFKTK---TSASTTTTNALPSSSNLPALLPN 239
Query: 386 XXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXXXX 565
FR+LS EMA+RREKGLC+N DE F+ H+CK R
Sbjct: 240 PKPPNRV--NFRKLSPEEMANRREKGLCYNCDETFTPQHKCKGRFFLLIADDDFDSDEPP 297
Query: 566 XXXXXVW-------PIVDPEAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
+ PI+ +E Q + H M+G+ T R+ G + + PV +L+DG
Sbjct: 298 IPPPTIESPPPESPPIITDPSE-AQISFHAMSGSTDQTTIRIPGRLANHPVTVLIDG 353
>gb|PNX92469.1| hypothetical protein L195_g015607 [Trifolium pratense]
Length = 566
Score = 102 bits (254), Expect = 3e-21
Identities = 91/290 (31%), Positives = 119/290 (41%), Gaps = 52/290 (17%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVS--------VDAQQWP---------NHLLDTVS 130
T+A +FKI QFF YH TPE ERIT++ + QW N L +
Sbjct: 61 TDAHGWIFKICQFFTYHETPEEERITIASFYLDGPALSWYQWMYRNSQLVSWNQFLQALE 120
Query: 131 HRIASW------GSLRTI--------Y*VALSRVSNR---------------------RF 205
R A G+L + Y V ++NR R
Sbjct: 121 TRFAPTAYDDPRGNLFKLTQSTTVAAYLVEFEALANRIVGLSSADLLSCFISGLKLDIRR 180
Query: 206 EVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTESSTSKNATSXXXX 385
EVLA+QP+SL+QAAGLARLQEDK+ D R R P TP S+ + T
Sbjct: 181 EVLARQPTSLTQAAGLARLQEDKLLDQQRANR------PKFTPPPPRYSSDSSITRPSPG 234
Query: 386 XXXXXXXXXRFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXXXX 565
RFR LS E+A+RREKGLCF Y R ++ K
Sbjct: 235 LLPTPPAKPRFRHLSEPELAERREKGLCFXYQNRSWRNAGKKDYVSTVIKSDQELEAIVT 294
Query: 566 XXXXXVWPIVDPEAEPTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
+ ++ Q +LH ++G + TF+V G I V ILVDG
Sbjct: 295 TPDSS----NNDDSPSAQLSLHALSGHQASDTFKVTGKIATHTVDILVDG 340
>dbj|GAU40605.1| hypothetical protein TSUD_28110 [Trifolium subterraneum]
Length = 1208
Score = 102 bits (254), Expect = 4e-21
Identities = 89/298 (29%), Positives = 123/298 (41%), Gaps = 60/298 (20%)
Frame = +2
Query: 2 TNAPALVFKISQFFAYHRTPETERITVS--------VDAQQWPNH---------LLDTVS 130
T+A +FKISQFF YH TPE ER+TV+ + QW LL +
Sbjct: 63 TDAMGWIFKISQFFDYHNTPEEERLTVASFYMDGPALSWYQWMFRNGLITTWFALLQAIE 122
Query: 131 HRIA---------------SWGSLRTIY*VALSRVSNR---------------------R 202
R A G L Y RV+NR R
Sbjct: 123 TRFAPSYYDDPSQALFKLTQRGPLNQ-YLTEFERVANRIVGLPQPFLLSCFISGLSPEIR 181
Query: 203 FEVLAQQPSSLSQAAGLARLQEDKVNDLLRLTRQKPPWSPAQTPSRTESSTSKNATSXXX 382
EV A QP+SLS A LA+LQEDK+ + R + P Q + + SS++ N+T
Sbjct: 182 REVQALQPASLSLATALAKLQEDKIEERRR------NYKPRQNNTSSSSSSNTNSTPLLP 235
Query: 383 XXXXXXXXXX-RFRQLSAAEMADRREKGLCFNYDERFSKSHRCKARXXXXXXXXXXXXXX 559
+FR+LS+ EM+ RREKGLC+N D+ F+ H+CK R
Sbjct: 236 SPTTPSNPPRVQFRKLSSEEMSSRREKGLCYNCDDTFTPGHKCKGRFYLLVSDDPESPPV 295
Query: 560 XXXXXXXVWPIVDPEAE------PTQFALHTMTGAHTAHTFRVQGHIDDEPVHILVDG 715
P D E Q + H+++G+ T R+ G I + V +L+DG
Sbjct: 296 EPLSIQS--PETDTENHLDTPDLDAQISFHSLSGSSATATLRIPGQIANHSVTVLIDG 351