BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00022245
         (1177 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY04054.1| ribonuclease H, partial [Trifolium pratense]           178   5e-86
gb|PNY14715.1| ribonuclease H [Trifolium pratense]                    177   1e-74
gb|KHN20047.1| Putative ribonuclease H protein, partial [Glycine...   164   2e-60
dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subt...   152   1e-59
gb|KYP65324.1| Putative ribonuclease H protein At1g65750 family ...   144   9e-59
dbj|GAU37589.1| hypothetical protein TSUD_365100 [Trifolium subt...   131   9e-58
dbj|GAU50504.1| hypothetical protein TSUD_409790 [Trifolium subt...   126   9e-56
gb|KYP46979.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]   124   1e-55
gb|PNX92714.1| ribonuclease H [Trifolium pratense]                    131   3e-55
gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]           143   2e-54
gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense]           125   3e-54
gb|PNY05589.1| ribonuclease H [Trifolium pratense]                    125   3e-54
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                    126   3e-54
dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subte...   136   5e-54
gb|KYP77061.1| Putative ribonuclease H protein At1g65750, partia...   125   1e-53
dbj|GAU24540.1| hypothetical protein TSUD_156530 [Trifolium subt...   131   2e-53
dbj|GAU48983.1| hypothetical protein TSUD_245740 [Trifolium subt...   134   2e-53
gb|KYP78366.1| Putative ribonuclease H protein At1g65750 family ...   127   2e-53
dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subt...   125   2e-53
gb|KYP77119.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]   127   2e-53

>gb|PNY04054.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1274

 Score =  178 bits (452), Expect(2) = 5e-86
 Identities = 86/189 (45%), Positives = 115/189 (60%)
 Frame = -1

Query: 811  GGKHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLS 632
            G  HCHWV    V QPRSKGGLG+  +R  N + LGKH+W+LIH+PDKLWV+LL+ KYL 
Sbjct: 1078 GNNHCHWVKWDTVTQPRSKGGLGIHVARKSNIALLGKHIWDLIHHPDKLWVQLLADKYLR 1137

Query: 631  NSDLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYI 452
            +  +       G+S  W  I+K VE+LK G+  RIG GDVSLWY+ WL  G LC+++PY+
Sbjct: 1138 HDHILHATKSQGASCVWNYIVKAVEVLKPGFKFRIGKGDVSLWYDNWLDYGCLCNSVPYV 1197

Query: 451  DIHDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMHAMLINPNYRDSLIWEXXXXXXXXX 272
             I +  L + D+Y+ G W      TQIP +LK  + ++ IN +  D LIW          
Sbjct: 1198 HISESHLLLKDVYNQGNWLLHSLTTQIPDNLKLHIQSIFINNDSPDILIWGFSNFGVYSA 1257

Query: 271  XXXYLWLTQ 245
               Y WL+Q
Sbjct: 1258 KSGYHWLSQ 1266



 Score =  169 bits (429), Expect(2) = 5e-86
 Identities = 74/125 (59%), Positives = 101/125 (80%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC ASG+KVNI+KSRF  S N++R K+ KFE I+ F H  ++G YLGFP+LSGR++N +F
Sbjct: 956  FCHASGLKVNIQKSRFMVSTNMSRIKVAKFESIVHFSHNTHLGKYLGFPMLSGRMRNSDF 1015

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
            ++I+D++N +L GWK+  LSRAGRVT A+SV+ +MPIYTM N+WI QG+CDK+D+  RQF
Sbjct: 1016 SFIMDRINNRLNGWKSKLLSRAGRVTLAQSVISAMPIYTMQNLWIPQGVCDKIDASVRQF 1075

Query: 816  IWGES 802
            IWG +
Sbjct: 1076 IWGNN 1080


>gb|PNY14715.1| ribonuclease H [Trifolium pratense]
          Length = 797

 Score =  177 bits (450), Expect(2) = 1e-74
 Identities = 78/153 (50%), Positives = 108/153 (70%)
 Frame = -1

Query: 811  GGKHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLS 632
            G K CHWV    + QP S+G LG+RK+R  N S LGKHVW+LIH P KLWV+LLSSKYL 
Sbjct: 645  GNKSCHWVGWPKITQPLSRGDLGVRKARTSNISMLGKHVWDLIHEPHKLWVQLLSSKYLL 704

Query: 631  NSDLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYI 452
             S +       GSSYTW+SI+K  + LK G+I  IG G+VS+WY+KWL  G+LC+ +P++
Sbjct: 705  GSHILQDLSSSGSSYTWQSIVKAAQELKHGFIVSIGKGEVSIWYDKWLEGGKLCNRIPFV 764

Query: 451  DIHDIDLQVADIYSNGAWNFDIPYTQIPQDLKD 353
             I+D  LQ+ D++ +G+W+F+   TQ+P  ++D
Sbjct: 765  HINDTQLQIKDVFYDGSWHFERLATQLPITIRD 797



 Score =  132 bits (332), Expect(2) = 1e-74
 Identities = 65/123 (52%), Positives = 79/123 (64%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC+ASGMK+NI KS+F PSKN+ R KI KFE I++ RHT NIG YLGFPLLS        
Sbjct: 552  FCVASGMKINIHKSKFLPSKNIHRHKITKFEGILEIRHTYNIGKYLGFPLLS-------- 603

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
                                 AGRVT AKSVLCS+P Y+M N+W+ +G+CDK+D+  RQF
Sbjct: 604  ---------------------AGRVTLAKSVLCSLPTYSMQNLWLPEGVCDKIDTCVRQF 642

Query: 816  IWG 808
            IWG
Sbjct: 643  IWG 645


>gb|KHN20047.1| Putative ribonuclease H protein, partial [Glycine soja]
          Length = 220

 Score =  164 bits (415), Expect(2) = 2e-60
 Identities = 70/139 (50%), Positives = 100/139 (71%)
 Frame = -1

Query: 811 GGKHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLS 632
           G    HWV    + Q R++GGLG+RK+R  N S LGKH+WE+IHNPDKLWVKL+++KYL+
Sbjct: 82  GSSTSHWVPWETITQSRARGGLGVRKAREANISLLGKHIWEVIHNPDKLWVKLMTNKYLN 141

Query: 631 NSDLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYI 452
           ++ +  +    G+++TW SI+K  + LKDG+  RIG GDVSLWY KWL +G LC  + Y+
Sbjct: 142 HNSIVQSMSPRGATFTWSSILKATDFLKDGFFIRIGRGDVSLWYGKWLLEGYLCSKVLYV 201

Query: 451 DIHDIDLQVADIYSNGAWN 395
           +  D  L+V D+++NG+WN
Sbjct: 202 NYQDTHLRVKDLWNNGSWN 220



 Score = 99.0 bits (245), Expect(2) = 2e-60
 Identities = 43/84 (51%), Positives = 59/84 (70%)
 Frame = -2

Query: 1053 IGMYLGFPLLSGRVKNENFTYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMN 874
            I  YLGFP+L GR++  +F++I+DK+  KL GWK   L+RAGRVT A SV+ ++P Y M+
Sbjct: 1    IDRYLGFPILIGRIQKPHFSFIIDKIQGKLAGWKQKLLNRAGRVTLANSVISAIPTYVMH 60

Query: 873  NMWITQGICDKLDSMYRQFIWGES 802
            N W  +GIC ++D   R FIWG S
Sbjct: 61   NCWRPEGICHQIDQTVRGFIWGSS 84


>dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subterraneum]
          Length = 1375

 Score =  152 bits (384), Expect(2) = 1e-59
 Identities = 76/189 (40%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
 Frame = -1

Query: 805  KHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNS 626
            K  H V    + +P+  GGLG+RK+R VNTS LGK VW +  N D LWV++L  KYL N 
Sbjct: 972  KGIHLVGWDKITKPKKLGGLGIRKAREVNTSLLGKLVWHMHQNCDTLWVQVLRHKYL-ND 1030

Query: 625  DLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDI 446
            D+F +      S TW +I+K ++ LKDG+  R+G G+ S WY  W   G L D +PY+DI
Sbjct: 1031 DMFFSITKKSGSITWNAIMKALQALKDGFQFRLGDGNSSFWYSNWSGIGNLADQVPYVDI 1090

Query: 445  HDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMHAM--LINPNYRDSLIWEXXXXXXXXX 272
            HD+ ++V D+Y+N  WNF++ YT IP D+ D +  +   +N    D   W+         
Sbjct: 1091 HDLQMRVRDVYTNNKWNFNLLYTTIPADVMDHVKRLPVCLNSQVVDRYTWKGNLNGLYTA 1150

Query: 271  XXXYLWLTQ 245
               Y WL +
Sbjct: 1151 KEGYYWLNR 1159



 Score =  108 bits (269), Expect(2) = 1e-59
 Identities = 49/122 (40%), Positives = 76/122 (62%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F   SG+KVN+ KS+ F S +  R KIN          T ++  YLGFP++ GR++  +F
Sbjct: 845  FASCSGLKVNVSKSKVFFSPSTPRGKINSIVTHTGINRTHSLEKYLGFPMMHGRLRRRDF 904

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             ++ +K++++L  W++N L++AGR+T  KSVL S+P Y M   W+ Q  CD +D M R F
Sbjct: 905  EFLEEKISQRLASWQHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQTTCDSIDRMTRSF 964

Query: 816  IW 811
            +W
Sbjct: 965  LW 966


>gb|KYP65324.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 729

 Score =  144 bits (364), Expect(2) = 9e-59
 Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
 Frame = -1

Query: 808 GKHCHW--VNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYL 635
           G   +W  V    V +P+  GGLG+R+SR VN S +GK +W+L+H+P K WVK+L +KYL
Sbjct: 225 GSSRYWSLVGWNTVTRPKEFGGLGIRESRQVNISLIGKLIWDLLHSPQKPWVKILQAKYL 284

Query: 634 SNSDLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPY 455
             + +       G+S  W SI+K +  L+ G+  ++G G+ SLWYE WL  G LC  +PY
Sbjct: 285 HGASVLQAKKANGASQVWNSIVKALPYLRQGFFPKLGAGNSSLWYEDWLGTGPLCREVPY 344

Query: 454 IDIHDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMHAMLI--NPNYRDSLIW 302
           + I D D  VA  +  GAWNFD  +T++P +L + +  + I  +P   D   W
Sbjct: 345 VHISDTDRIVAHCWQQGAWNFDSLFTRLPMELVNRIQQVPIPSSPAGADMFSW 397



 Score =  112 bits (281), Expect(2) = 9e-59
 Identities = 46/125 (36%), Positives = 80/125 (64%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC ASG+K+N+EKS+F  SK V  A+I + E+ +   HT     YLG P+  G+ K  +F
Sbjct: 100  FCTASGLKINLEKSKFVVSKGVPSARIEQLEQTLGIEHTPRFKRYLGIPMFHGKAKIADF 159

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +++D++N  L  WK   L++AGR+    SV+ S+P+Y+M ++W+ Q +C++++   R  
Sbjct: 160  HHVIDRINDCLATWKGRLLNKAGRLCLINSVVTSIPLYSMQSLWLPQAVCNRINQASRTM 219

Query: 816  IWGES 802
            +W ++
Sbjct: 220  LWAKA 224


>dbj|GAU37589.1| hypothetical protein TSUD_365100 [Trifolium subterraneum]
          Length = 648

 Score =  131 bits (329), Expect(2) = 9e-58
 Identities = 61/122 (50%), Positives = 81/122 (66%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F  ASG+++N  KSR   SK VTR K++K   + + R T ++G YLGFP++SGR K E+F
Sbjct: 266  FSKASGLRINCAKSRALFSKGVTRRKVDKMTTLSNIRSTTSLGKYLGFPMISGRAKKEDF 325

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +ILDK+N +L  WKN  L++ GRVT AKSVL S+P Y M   W+   IC K+D   R F
Sbjct: 326  NFILDKINSRLASWKNKFLNKLGRVTLAKSVLNSIPTYYMQIHWLPSAICSKIDQTTRNF 385

Query: 816  IW 811
            IW
Sbjct: 386  IW 387



 Score =  122 bits (307), Expect(2) = 9e-58
 Identities = 75/205 (36%), Positives = 104/205 (50%), Gaps = 3/205 (1%)
 Frame = -1

Query: 805  KHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNS 626
            K  H VN   + Q +  GGLG+R +R  NT+ LGK VW++  N +K WV ++  KYL N 
Sbjct: 393  KGIHLVNWHTIIQTKKDGGLGVRLARETNTAMLGKLVWDIQQNTNKPWVHMIKDKYLYNK 452

Query: 625  DLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDI 446
              F+T    GS   W SI K  ++L +GY  RI  G  SLWY  WL K  L   + Y+ I
Sbjct: 453  MFFNTPRSYGSPI-WNSISKAKQVLLEGYHFRISDGSSSLWYSPWLSKDLLGRKVDYVAI 511

Query: 445  HDIDLQVADIYSNGAWNFDIPYTQI-PQDLKDLMHA-MLINPNYRDSLIWEXXXXXXXXX 272
             D  L++ D++ N AW  ++ YT + P  +  +M+   ++N    D  IW          
Sbjct: 512  QDSHLRIKDVFINDAWQLNLLYTPLQPDVITSIMNTHFILNNGTSDCFIWNGNISGVYSA 571

Query: 271  XXXYLW-LTQPSEQQDGLVLRNDSS 200
               Y W L Q +  QD LVL  D S
Sbjct: 572  SSGYNWLLEQRANIQDLLVLEWDVS 596


>dbj|GAU50504.1| hypothetical protein TSUD_409790 [Trifolium subterraneum]
          Length = 902

 Score =  126 bits (316), Expect(2) = 9e-56
 Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
 Frame = -1

Query: 805  KHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNS 626
            K  H V+   + +P+  GGL +R +R  N S LGK VW+++ + +KLWV LLSSKY+  S
Sbjct: 561  KGIHLVSWKKIARPKQHGGLSIRTARGQNISLLGKLVWDMVQSSNKLWVDLLSSKYVKGS 620

Query: 625  DLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDI 446
                +      S TW SII+   +LKDG+  R G G  S W   W   G+L   +PYIDI
Sbjct: 621  TFLLSGNNSSGSPTWSSIIQAKNILKDGFSWRAGSGTSSFWSSHWTTLGQLGALVPYIDI 680

Query: 445  HDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMHAMLI--NPNYRDSLIW 302
            HD+ L + D+ S  + +  I YTQ+P  + DL++ + I  N +  D+ IW
Sbjct: 681  HDLQLSIKDVLSTNSPHTHILYTQLPPSVSDLINNIHIKFNDSIDDAFIW 730



 Score =  121 bits (303), Expect(2) = 9e-56
 Identities = 56/125 (44%), Positives = 77/125 (61%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F  ASG+K+N+ KSR F S  +   KINK   I   R T+++  YLGFP+L GR K  +F
Sbjct: 434  FSRASGLKINLSKSRAFYSAGIPHTKINKLTSISGIRSTVSLDKYLGFPILKGRAKRSDF 493

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +I+DK+  +L  WKN  L++ GR+  A SV+ S+P Y M   W+ Q ICD +D   R F
Sbjct: 494  HFIIDKMQSRLASWKNKLLNKLGRLALASSVISSIPSYYMQISWLPQSICDSIDQTTRNF 553

Query: 816  IWGES 802
            IW +S
Sbjct: 554  IWRDS 558


>gb|KYP46979.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 887

 Score =  124 bits (311), Expect(2) = 1e-55
 Identities = 68/167 (40%), Positives = 101/167 (60%), Gaps = 4/167 (2%)
 Frame = -1

Query: 790  VNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYL-SNSDLFD 614
            VN   V +P++ GGLG+R++R++N + LGK +W+ I NP+  WVK L  KYL SNS L  
Sbjct: 719  VNWSQVTKPKAHGGLGIREARNMNIALLGKLIWKYIMNPETPWVKFLKHKYLKSNSILIP 778

Query: 613  -TAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDIHDI 437
             T  CP  SY W+SI K VE LK G+  ++G G  S++Y+ WL  G L   +P++ I D 
Sbjct: 779  LTFKCP--SYIWKSINKAVEFLKSGFKPKLGTGGSSVFYDNWLGVGPLYTKVPFVHISDT 836

Query: 436  DLQVADIYSNGAWNFDIPYTQIPQDL--KDLMHAMLINPNYRDSLIW 302
             L + D+++N  WN  I +T I +D+  K L   + + P  +D+  W
Sbjct: 837  QLNLVDLWANNEWNLPILHTNITKDIEQKILRVKIPLTPVGQDTFRW 883



 Score =  122 bits (306), Expect(2) = 1e-55
 Identities = 51/124 (41%), Positives = 85/124 (68%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC ASG+K+N +KS+F  SKN++ +++ + E+++  +   ++G YLG  L+SGR  N++F
Sbjct: 586  FCRASGLKINQQKSKFVCSKNISNSRLEELEKLLGIKKANSLGKYLGHNLISGRATNKDF 645

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             ++++KV  ++  WK   L+RAGR   AKSV+ S+P+YTM   W+ Q  CD L+ +YR+ 
Sbjct: 646  EHVINKVRSRIASWKGKLLNRAGRTCLAKSVITSIPVYTMQAYWLPQRTCDLLNQLYRRC 705

Query: 816  IWGE 805
            IW +
Sbjct: 706  IWSK 709


>gb|PNX92714.1| ribonuclease H [Trifolium pratense]
          Length = 1359

 Score =  131 bits (330), Expect(2) = 3e-55
 Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
 Frame = -1

Query: 766  PRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNSDLFDTAPCPGSSY 587
            P+  GGLG+R +R +NTS LGK VW+L+ + DKLWV++LS KY+S + +  +    GSS 
Sbjct: 855  PKRCGGLGIRAARDMNTSLLGKLVWDLLQDSDKLWVRVLSDKYISGTRILSSDTLSGSS- 913

Query: 586  TWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDIHDIDLQVADIYSN 407
            TW SI+K   +L+ G++ R G G+ S WY  W H G L   +PY+  HD  L V D++ +
Sbjct: 914  TWNSIMKAKNVLRTGFVWRPGSGNSSFWYSHWSHFGPLGAIVPYVHYHDTALMVKDVFVS 973

Query: 406  GAWNFDIPYTQIPQDLKDLMHAM--LINPNYRDSLIWEXXXXXXXXXXXXYLWL 251
               N  + YTQ+PQ++   +++M    N    D++IW             YLW+
Sbjct: 974  STANLHLLYTQLPQEVVISLNSMKFSFNSTIEDTMIWSANKHGTYTTSSGYLWI 1027



 Score =  114 bits (284), Expect(2) = 3e-55
 Identities = 56/129 (43%), Positives = 78/129 (60%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F  ASG+K+NI KSR   S  + RAKI +   I   R T ++G YLGFP+L+GR K  +F
Sbjct: 715  FSRASGLKINISKSRALFSSGIPRAKIQQLTSITGIRSTPSLGKYLGFPILNGRAKKSDF 774

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +I++K+  +L  WK+  L++ GR+  A SVL S+P Y M   W+ Q IC+ +D   R F
Sbjct: 775  DFIIEKMQTRLASWKSKLLNKPGRLALASSVLTSIPSYYMQIAWLPQSICNIIDHTTRHF 834

Query: 816  IWGESIVIG 790
            IW  S   G
Sbjct: 835  IWKGSTNTG 843


>gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1142

 Score =  143 bits (361), Expect(2) = 2e-54
 Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
 Frame = -1

Query: 796  HWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNSDLF 617
            H V+   + +P+  GGLG+RKSR  NT+ LGK VW +  N D LWV++L  KY++N    
Sbjct: 787  HLVSWDKITRPKKLGGLGIRKSREANTALLGKLVWSIHQNCDSLWVQVLKHKYINNGSFI 846

Query: 616  DTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDIHDI 437
                 PGS  TW +I+K +  L+DG+  R+G G+ S W+  W   G+L D + Y+DIHD+
Sbjct: 847  TMTKKPGS-VTWNAIMKALLALRDGFEFRLGNGNSSFWFSNWSGTGKLADKVLYVDIHDL 905

Query: 436  DLQVADIYSNGAWNFDIPYTQIPQDLKD--LMHAMLINPNYRDSLIWEXXXXXXXXXXXX 263
            ++ V D+Y++G WNF++ YT IP  + D   M  + +N    D   W+            
Sbjct: 906  EMSVKDVYTDGNWNFNMLYTNIPTAVTDHLKMIPVCLNSQVADCYTWKGNLNGIYSARDG 965

Query: 262  YLWLTQ 245
            Y WL +
Sbjct: 966  YFWLNR 971



 Score = 99.4 bits (246), Expect(2) = 2e-54
 Identities = 45/122 (36%), Positives = 74/122 (60%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F   SG+KVN  KS+ F S +  R K+           T ++  YLGFP++ GR++ +++
Sbjct: 657  FASFSGLKVNATKSKVFFSSSTKRGKMTSIVTSTGISRTHSLEKYLGFPMMHGRLQRKDY 716

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             ++ +K++ +L  W++N L++AGR+T  KSVL S+P Y M   W+ Q  C+ +D M R F
Sbjct: 717  EFLEEKISHRLASWQHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQSTCETIDRMARNF 776

Query: 816  IW 811
            +W
Sbjct: 777  LW 778


>gb|PNX92211.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1462

 Score =  125 bits (313), Expect(2) = 3e-54
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
 Frame = -1

Query: 805  KHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNS 626
            K  H V+   + +P++ GGLGLR +R  N   LGK VW+L+ + +KLWV + + +Y +  
Sbjct: 1057 KGTHLVSWKKISRPKNLGGLGLRPARDANICLLGKLVWDLLQSTNKLWVNVFTYRYTTGF 1116

Query: 625  DLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDI 446
             +         S TW SII+  E+LK+G+  R G G  S W+  W   G LC  +PYIDI
Sbjct: 1117 KILQACDQQSGSPTWSSIIRAKEILKEGFSWRAGSGSSSFWFCPWSALGFLCKLVPYIDI 1176

Query: 445  HDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMH--AMLINPNYRDSLIWEXXXXXXXXX 272
            HD+ L V+D+ S+   + +I Y+ +PQ   D+++   +  N +  D+ IW          
Sbjct: 1177 HDMQLTVSDVISSNEPHSNILYSHLPQTALDIINNTNLTFNASIEDAFIWHNNKNGVYTT 1236

Query: 271  XXXYLWLTQPSEQ 233
               Y WL    EQ
Sbjct: 1237 KSGYDWLLSRKEQ 1249



 Score =  117 bits (293), Expect(2) = 3e-54
 Identities = 55/125 (44%), Positives = 77/125 (61%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F  ASG+K+N+ KSR F S    R KIN+   +   R+T ++  YLGFP+L GR K  +F
Sbjct: 930  FSHASGLKINLSKSRAFYSSGTPRDKINRLTSLSGIRNTTSLEKYLGFPILKGRAKKSDF 989

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +I++K+  +L  WKN  L++ GR+  A SVL S+P Y M   W+ Q ICD +D   R F
Sbjct: 990  LFIIEKMQSRLASWKNKLLNKPGRLALASSVLSSIPNYYMQIAWLPQSICDGIDQTTRNF 1049

Query: 816  IWGES 802
            IW +S
Sbjct: 1050 IWRDS 1054


>gb|PNY05589.1| ribonuclease H [Trifolium pratense]
          Length = 1360

 Score =  125 bits (313), Expect(2) = 3e-54
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
 Frame = -1

Query: 805  KHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNS 626
            K  H V+   + +P++ GGLGLR +R  N   LGK VW+L+ + +KLWV + + +Y +  
Sbjct: 842  KGTHLVSWKKISRPKNLGGLGLRPARDANICLLGKLVWDLLQSTNKLWVNVFTYRYTTGF 901

Query: 625  DLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDI 446
             +         S TW SII+  E+LK+G+  R G G  S W+  W   G LC  +PYIDI
Sbjct: 902  KILQACDQQSGSPTWSSIIRAKEILKEGFSWRAGSGSSSFWFCPWSALGFLCKLVPYIDI 961

Query: 445  HDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMH--AMLINPNYRDSLIWEXXXXXXXXX 272
            HD+ L V+D+ S+   + +I Y+ +PQ   D+++   +  N +  D+ IW          
Sbjct: 962  HDMQLTVSDVISSNEPHSNILYSHLPQTALDIINNTNLTFNASIEDAFIWHNNKNGVYTT 1021

Query: 271  XXXYLWLTQPSEQ 233
               Y WL    EQ
Sbjct: 1022 KSGYDWLLSRKEQ 1034



 Score =  117 bits (293), Expect(2) = 3e-54
 Identities = 55/125 (44%), Positives = 77/125 (61%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F  ASG+K+N+ KSR F S    R KIN+   +   R+T ++  YLGFP+L GR K  +F
Sbjct: 715  FSHASGLKINLSKSRAFYSSGTPRDKINRLTSLSGIRNTTSLEKYLGFPILKGRAKKSDF 774

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +I++K+  +L  WKN  L++ GR+  A SVL S+P Y M   W+ Q ICD +D   R F
Sbjct: 775  LFIIEKMQSRLASWKNKLLNKPGRLALASSVLSSIPNYYMQIAWLPQSICDGIDQTTRNF 834

Query: 816  IWGES 802
            IW +S
Sbjct: 835  IWRDS 839


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score =  126 bits (316), Expect(2) = 3e-54
 Identities = 62/122 (50%), Positives = 79/122 (64%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F  ASG+K+N  KSR F S  VTR K  K   +   R T + G YLGFP++SGRV+ E+F
Sbjct: 667  FSKASGLKINCTKSRAFFSAGVTRRKREKLTSLSSIRSTNSFGNYLGFPMISGRVRKEDF 726

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +ILDK+N +L  WKN  L++ GRVT AKSVL S+P Y M   W+   IC ++D M R F
Sbjct: 727  NFILDKLNSRLASWKNKLLNKPGRVTLAKSVLNSIPTYYMQISWLPSSICYQIDQMTRNF 786

Query: 816  IW 811
            IW
Sbjct: 787  IW 788



 Score =  116 bits (290), Expect(2) = 3e-54
 Identities = 63/189 (33%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
 Frame = -1

Query: 805  KHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNS 626
            K  H V    + Q +S GGLG+R +R  NT+ LGK VW++  N  K WV +L SKYL + 
Sbjct: 794  KGIHLVGWSSITQTKSDGGLGIRLAREANTAMLGKLVWDIQQNSPKPWVLMLRSKYLQHQ 853

Query: 625  DLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDI 446
               +    PGS   W SI K   +L DG+  R+  G    WY  WL    L   + Y+ I
Sbjct: 854  PFINAPTQPGSPI-WNSISKAKMILADGFKYRVSDGSSLFWYSPWLSHKLLGTEVDYVAI 912

Query: 445  HDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMHA--MLINPNYRDSLIWEXXXXXXXXX 272
             D  +++ DIY N +W+ ++ YT +  ++K+ + +   ++N    D  IW+         
Sbjct: 913  QDSQIRIKDIYFNDSWHLNLLYTPLSSEMKERITSTKFILNNGTIDCFIWQGNIDGIYNA 972

Query: 271  XXXYLWLTQ 245
               Y WL Q
Sbjct: 973  SSGYKWLLQ 981


>dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score =  136 bits (343), Expect(2) = 5e-54
 Identities = 63/168 (37%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
 Frame = -1

Query: 796 HWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNSDLF 617
           H V      +P+  GGLG+RK R  NTS LGK VW +  N + LWV+++  KY+    L 
Sbjct: 230 HLVGWDKTTKPKKLGGLGIRKLREANTSLLGKLVWNIHQNNEALWVQVIRHKYIKGEVLL 289

Query: 616 DTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDIHDI 437
           +    PG   TW +I+K +  LK+GY  R+G G+ S W+  W   G L + + Y+DIHD+
Sbjct: 290 NITKKPGL-VTWNAIMKALSALKEGYHFRLGNGNSSFWFTNWSGSGVLANQVMYVDIHDL 348

Query: 436 DLQVADIYSNGAWNFDIPYTQIPQDLKD--LMHAMLINPNYRDSLIWE 299
           +++V D+Y +G WNF+  YT +P ++K+  +   + +NP+  D   W+
Sbjct: 349 EMRVRDVYIDGIWNFNALYTALPMEIKERLISFPICLNPSINDCYTWK 396



 Score =  105 bits (261), Expect(2) = 5e-54
 Identities = 49/118 (41%), Positives = 73/118 (61%)
 Frame = -2

Query: 1164 SGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENFTYIL 985
            SG+KVNI KS+ F S    R KI+          TL++  YLGFP++ GR++  +F ++ 
Sbjct: 104  SGLKVNISKSKVFFSSTTRRGKISSIVASTGINRTLSLEKYLGFPMMHGRLQRRDFAFLE 163

Query: 984  DKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQFIW 811
            +K++KKL  W++  L++AGR+T  KSVL S+P Y M   W+ Q   D +D M R F+W
Sbjct: 164  EKISKKLASWQHRLLNKAGRLTLVKSVLNSIPNYYMQITWLPQTTSDSIDKMARNFLW 221


>gb|KYP77061.1| Putative ribonuclease H protein At1g65750, partial [Cajanus cajan]
          Length = 516

 Score =  125 bits (314), Expect(2) = 1e-53
 Identities = 62/159 (38%), Positives = 98/159 (61%), Gaps = 2/159 (1%)
 Frame = -1

Query: 796 HWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNSDLF 617
           ++VN   V + ++ GGLG+R++R++N + LGK +W+ I NP+  WVK L  KYL ++ + 
Sbjct: 229 NFVNWSQVTKSKAHGGLGIREARNMNIALLGKQIWKYIMNPETPWVKFLKHKYLKSNSIL 288

Query: 616 D--TAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDIH 443
              T  CP  SY W+SI K VE+LK G+  ++G G  S++YE WL  G LC  +P++ I 
Sbjct: 289 TPLTIKCP--SYVWKSIKKAVEVLKYGFEPKLGLGRSSVFYEDWLGDGPLCTKVPFVHIS 346

Query: 442 DIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMHAMLINP 326
           D  L +ADI+ N  WN    +T I +D++  +  + + P
Sbjct: 347 DTQLSLADIWVNNKWNLLTLHTNITKDIEQKILKVKVPP 385



 Score =  114 bits (286), Expect(2) = 1e-53
 Identities = 49/124 (39%), Positives = 81/124 (65%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC ASG+K+N +KS+F  SK +  +++ + E ++  +   ++G YLG  L+SGR  N++F
Sbjct: 98   FCRASGLKINQQKSKFVCSKKIINSRLEELENLLGIKKANSVGKYLGHILISGRATNKDF 157

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             ++ +KV  ++  WK   L+RAGR+  AKSV+ S+ +YTM   W+ Q  CD L+ + R+F
Sbjct: 158  EHVTNKVRSRIASWKRKLLNRAGRICLAKSVITSILVYTMQAYWLPQRTCDHLNQLCRRF 217

Query: 816  IWGE 805
            IW +
Sbjct: 218  IWSK 221


>dbj|GAU24540.1| hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score =  131 bits (330), Expect(2) = 2e-53
 Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
 Frame = -1

Query: 811  GGKHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLS 632
            G    H V    + QPR  GGLG+R +R  N S LGK +WE+ ++P KLWVKL   KY  
Sbjct: 627  GDTGMHLVRWEKITQPRRFGGLGVRIARLQNVSLLGKLIWEVSNSPGKLWVKLFIDKYTK 686

Query: 631  NSDLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYI 452
               LF+ +   G S  W S+ K + +L+DG+  +IG G+   WY+ W  K  LC  +P++
Sbjct: 687  GRHLFNVS-VSGGSCIWNSLAKALHMLRDGFTFKIGNGNSRFWYDPWALKENLCSTVPFV 745

Query: 451  DIHDIDLQVADIYSNGAWNFDIPYTQIPQDLKD---LMHAMLINPNYRDSLIWEXXXXXX 281
             I D DL++ D++ NG W+ +  YT IP + ++   L+   ++N +  D  +W+      
Sbjct: 746  AIQDTDLKINDVWCNGRWHLEKLYTSIPDEARNYILLLQPYIVN-DILDVWVWQNSSNGV 804

Query: 280  XXXXXXYLWLTQP 242
                  Y WL  P
Sbjct: 805  YTTKDAYEWLLNP 817



 Score =  107 bits (268), Expect(2) = 2e-53
 Identities = 50/122 (40%), Positives = 75/122 (61%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC+ SG+K+++EKS+F  S  V+R +      +     T     YLGF +  G+V+ ++F
Sbjct: 502  FCVMSGLKISLEKSKFCTSAGVSRRRREDIAVVTQIHATDKFEKYLGFKMFYGKVRKQDF 561

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
            + + D+V+ KL  WK+  L++AGRV  A SVL S+P Y M   W+ QG+CD LD   R+F
Sbjct: 562  SNVYDRVSAKLASWKSRLLNKAGRVVLANSVLSSLPSYHMQINWLPQGMCDDLDRTVRRF 621

Query: 816  IW 811
            IW
Sbjct: 622  IW 623


>dbj|GAU48983.1| hypothetical protein TSUD_245740 [Trifolium subterraneum]
          Length = 1103

 Score =  134 bits (338), Expect(2) = 2e-53
 Identities = 82/272 (30%), Positives = 135/272 (49%), Gaps = 9/272 (3%)
 Frame = -1

Query: 811  GGKHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLS 632
            G    H V    + QPR  GGLG+R +R  N S LGK +WE+ ++P KLWVKL   KY  
Sbjct: 686  GDTGMHLVGWEKITQPRRFGGLGVRIARLQNVSLLGKLIWEISNSPGKLWVKLFIDKYTK 745

Query: 631  NSDLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYI 452
               LF+ +   G S  W S+ K + +L+DG+  +IG G+   WY  W  K  LC  +P++
Sbjct: 746  GRHLFNVS-VSGGSCIWNSLAKALHMLRDGFTFKIGDGNSRFWYYPWALKENLCSTVPFV 804

Query: 451  DIHDIDLQVADIYSNGAWNFDIPYTQIPQDLKDLMHAMLINPNYRDSLIWEXXXXXXXXX 272
             I D DL++ D++ NG W+ +  YT IP + ++ +  +L+ P   + +            
Sbjct: 805  AIQDTDLKINDVWCNGRWHLEKLYTSIPDEARNSI--LLLQPYIVNDI------------ 850

Query: 271  XXXYLWLTQPSEQQDGLVLRND-----SSGQLFLTSC*HIWKSRNNEIFND----IKDPI 119
                +W+ Q S   +G+    D     S G +       +W SRN+ IFN+    + + +
Sbjct: 851  --PDVWVWQNS--SNGVYTTKDADVGKSHGCIIFIIMWFVWCSRNDAIFNNNKAIVHNLV 906

Query: 118  *KLRNTITSDLQALQAAMVANNKVLQKRLVSW 23
             K+ + ++  + A +     +    ++RLV W
Sbjct: 907  AKVHSMLSFCIAAFKNTTSGSGGNSEQRLVVW 938



 Score =  104 bits (260), Expect(2) = 2e-53
 Identities = 49/122 (40%), Positives = 73/122 (59%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC  SG+K+++EKS+F  S  V+R +      +           YLGF +  G+V+ ++F
Sbjct: 561  FCAMSGLKISLEKSKFCTSAGVSRRRREDIAVVTQIHAIDKFEKYLGFKMFYGKVRKQDF 620

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
            + + D+V+ KL  WK+  L++AGRV  A SVL S+P Y M   W+ QG+CD LD   R+F
Sbjct: 621  SNVYDRVSAKLASWKSRLLNKAGRVVLANSVLSSLPSYHMQINWLPQGMCDDLDRTVRRF 680

Query: 816  IW 811
            IW
Sbjct: 681  IW 682


>gb|KYP78366.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1090

 Score =  127 bits (318), Expect(2) = 2e-53
 Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 2/195 (1%)
 Frame = -1

Query: 808  GKHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSN 629
            GK  + V    + + R +GGL  R SR  N S LGK VW+L+   DK WV ++S KYL +
Sbjct: 575  GKGINLVAWTKITRRRREGGLNTRISRFKNVSLLGKLVWDLLQGHDKFWVSIMSKKYLLS 634

Query: 628  SDLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYID 449
              +       GS Y WRSIIK  + L  G+  ++G  DVS W++ W  +G LC+ +  ID
Sbjct: 635  DSILKCQKKQGS-YVWRSIIKARDFLLSGFKLKLGNRDVSFWFKDWTGEGPLCERVWAID 693

Query: 448  IHDIDLQVADIYSNGAWNFDIPYTQIPQDLKD--LMHAMLINPNYRDSLIWEXXXXXXXX 275
            +HD++++V D+++   WN    +T + +D     L   +L++    D ++W+        
Sbjct: 694  VHDLEMRVRDVWNEEGWNLSSLWTSLSKDFNHVLLKQTLLLSEGLHDCIVWKPDLTGNYS 753

Query: 274  XXXXYLWLTQPSEQQ 230
                Y WLT   EQQ
Sbjct: 754  AKSGYNWLTFEPEQQ 768



 Score =  112 bits (280), Expect(2) = 2e-53
 Identities = 53/122 (43%), Positives = 74/122 (60%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            FC  S +K+N++KSR F SK +T AK  + + I + R T ++G YLGFP+  GR + E F
Sbjct: 449  FCTKSRLKINVDKSRAFASKTITSAKKARLQGISNIRFTTSLGKYLGFPIFYGRPRREVF 508

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
              + D+++ KL  WK   LS+ GRVT A +V+ S+P + M   W    IC  LD M R F
Sbjct: 509  QPVFDRISAKLATWKGKLLSKPGRVTLANAVISSIPTFFMQLYWFPNYICSTLDQMSRDF 568

Query: 816  IW 811
            IW
Sbjct: 569  IW 570


>dbj|GAU41508.1| hypothetical protein TSUD_302460 [Trifolium subterraneum]
          Length = 1075

 Score =  125 bits (315), Expect(2) = 2e-53
 Identities = 57/125 (45%), Positives = 81/125 (64%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F LASG+K+N+ KSR F S  + +AKINK   +   R T+++  YLGFP+L GR K  +F
Sbjct: 507  FGLASGLKINLSKSRAFYSSGIPQAKINKLTSLSGIRSTVSLDKYLGFPILKGRAKRNDF 566

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
             +I+DK+  +L  WKN  L++ GR+  A SVL S+P Y M   W+ Q ICD +D   R+F
Sbjct: 567  NFIIDKMQSRLASWKNRLLNKPGRLALASSVLSSIPTYYMQIAWLPQSICDSIDQTTRKF 626

Query: 816  IWGES 802
            +W +S
Sbjct: 627  LWKDS 631



 Score =  113 bits (283), Expect(2) = 2e-53
 Identities = 55/130 (42%), Positives = 78/130 (60%)
 Frame = -1

Query: 805  KHCHWVNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNS 626
            K  H V    + +P++ GGLG+R +R  NTS LGK VW+++ + +KLWV LLS+KY++  
Sbjct: 634  KGIHLVGWNKIARPKNLGGLGIRPAREANTSLLGKLVWDMVQSSNKLWVNLLSNKYVAGP 693

Query: 625  DLFDTAPCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDI 446
            ++  +      S TW SII    +LKDG+  R G G  S W+  W   G L   +PYIDI
Sbjct: 694  EILHSNSHSTGSPTWSSIIHAKNVLKDGFSWRAGSGSSSFWFSHWSPLGYLGTLVPYIDI 753

Query: 445  HDIDLQVADI 416
            HD+ L V D+
Sbjct: 754  HDLQLSVKDL 763


>gb|KYP77119.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 651

 Score =  127 bits (320), Expect(2) = 2e-53
 Identities = 58/144 (40%), Positives = 89/144 (61%)
 Frame = -1

Query: 790 VNGGIVCQPRSKGGLGLRKSRHVNTSKLGKHVWELIHNPDKLWVKLLSSKYLSNSDLFDT 611
           V+  +V QP+  GGLG+R++R VN S LGK VW+L+  P K+WV++LSS YL  + +   
Sbjct: 431 VSWAVVTQPKELGGLGVREARRVNVSLLGKLVWDLLTAPQKIWVQILSSLYLHGNSILSA 490

Query: 610 APCPGSSYTWRSIIKVVELLKDGYINRIG*GDVSLWYEKWLHKGRLCDNLPYIDIHDIDL 431
               G+S  W S++K +  L++G+  ++G G  SLWY  W   G  C  +PY+ + DI+ 
Sbjct: 491 QNSRGASPIWSSLVKALPFLREGFEPQLGSGASSLWYTDWSGTGLWCGRVPYVHVADINK 550

Query: 430 QVADIYSNGAWNFDIPYTQIPQDL 359
            VAD + +G WNF   +T +P +L
Sbjct: 551 TVADCWVSGVWNFTKLHTALPAEL 574



 Score =  111 bits (278), Expect(2) = 2e-53
 Identities = 46/125 (36%), Positives = 80/125 (64%)
 Frame = -2

Query: 1176 FCLASGMKVNIEKSRFFPSKNVTRAKINKFERIIDFRHTLNIGMYLGFPLLSGRVKNENF 997
            F  +SG++VN+ KS+F  S+ V + +I+  E ++   HT  IG YLG P+  G+ +  NF
Sbjct: 298  FSQSSGLRVNLAKSKFVSSRRVLQRRIDALEGLLGIGHTTQIGKYLGVPMTQGQPRCANF 357

Query: 996  TYILDKVNKKLVGWKNNHLSRAGRVTHAKSVLCSMPIYTMNNMWITQGICDKLDSMYRQF 817
              ++DK+  +L  WK+  L++AGR+   KS + S+P+Y+M  +W+ Q +C+K+D   R+ 
Sbjct: 358  HDVMDKIQGRLAAWKSRLLNKAGRLCLVKSTISSIPVYSMQTLWLPQAVCNKIDQACRRM 417

Query: 816  IWGES 802
            +W +S
Sbjct: 418  LWAKS 422