BLASTX nr result

ID: Astragalus23_contig00022156 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00022156
         (1479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590171.1| transmembrane protein, putative [Medicago tr...    58   5e-06

>ref|XP_003590171.1| transmembrane protein, putative [Medicago truncatula]
 gb|AES60422.1| transmembrane protein, putative [Medicago truncatula]
          Length = 209

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 39/106 (36%), Positives = 51/106 (48%)
 Frame = +2

Query: 773  SNLCWVLYALKMFDEMPLPSQIFCLHFLCVVSLVSYPNLYTSPNFQWKLDCWICKGKFET 952
            S LC+V+ A K+F +MP     F    +C    V+  NLY     Q      +    FET
Sbjct: 102  SCLCFVMVAQKLFVKMPQWCWTFWTRVMCAYLKVAANNLYLFSTKQMDSKFVVSLTNFET 161

Query: 953  AYSRISPLEAKDLIRNWIGKKTVVPHILLALIHGRKKLLSWVADYR 1090
             YSR    + K++I NWI KKTV         H RKKL+ WV  +R
Sbjct: 162  TYSRYVLAKVKEMILNWIDKKTVDLLFSFVNDHLRKKLV-WVIGFR 206


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