BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00020807
         (1058 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_014622404.1| PREDICTED: uncharacterized mitochondrial pro...   245   e-114
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   236   e-113
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   234   e-113
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   234   e-113
gb|PNX54637.1| histone deacetylase [Trifolium pratense]               241   e-112
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   230   e-112
gb|PNX93473.1| retrovirus-related Pol polyprotein from transposo...   224   e-110
gb|PNY08092.1| histone deacetylase [Trifolium pratense]               234   e-110
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]      229   e-109
gb|PNX92571.1| histone deacetylase [Trifolium pratense]               241   e-109
gb|KYP56497.1| Retrovirus-related Pol polyprotein from transposo...   230   e-109
dbj|GAU31266.1| hypothetical protein TSUD_153410 [Trifolium subt...   226   e-108
gb|KYP44504.1| hypothetical protein KK1_034024 [Cajanus cajan]        235   e-108
gb|PNX95703.1| retrovirus-related Pol polyprotein from transposo...   212   e-107
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   231   e-107
gb|KYP37943.1| Retrovirus-related Pol polyprotein from transposo...   226   e-106
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo...   222   e-106
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   235   e-106
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   235   e-106
gb|KYP45673.1| Copia protein [Cajanus cajan]                          229   e-106

>ref|XP_014622404.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Glycine max]
          Length = 443

 Score =  245 bits (625), Expect(2) = e-114
 Identities = 117/184 (63%), Positives = 144/184 (78%)
 Frame = -1

Query: 644 SHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVYLG 465
           SH  +VKRILRYLKGT++HGLLLQP  I KPL +R            DR+STSG+A++LG
Sbjct: 250 SHWTVVKRILRYLKGTLSHGLLLQPTSIAKPLNIRAFCNADWASDVDDRRSTSGAAIFLG 309

Query: 464 PNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQSAV 285
           PNL+SWWS+KQ V+ARSS EAEY S+A T+ E++WI++LL EL +  T P IFCDNQSA+
Sbjct: 310 PNLVSWWSRKQKVIARSSIEAEYCSIAQTSTELTWIYALLIELQVSFTTPIIFCDNQSAI 369

Query: 284 ALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFLRS 105
           +LAHNPV H+RTKHME+D+FFVR+K+L KQL + HVP  DQWAD+LTKP S SRFE LR 
Sbjct: 370 SLAHNPVFHSRTKHMEIDVFFVREKILAKQLTIVHVPVLDQWADILTKPFSASRFEVLRG 429

Query: 104 KLQV 93
           KL V
Sbjct: 430 KLNV 433



 Score =  197 bits (502), Expect(2) = e-114
 Identities = 95/139 (68%), Positives = 118/139 (84%)
 Frame = -3

Query: 1050 TAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQ 871
            T YLLVYVDDIILTGSS +LI+QL  + ++AFSLKQLG L +FLG+E+K L + ++L+TQ
Sbjct: 114  TVYLLVYVDDIILTGSSTSLIQQLTDKLNTAFSLKQLGHLDFFLGLEIKYLFNKSILMTQ 173

Query: 870  SKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEI 691
            SKYIRDLL KTNMAEA++ISSPMVS+CKLS+ G D   DP +Y+S+VGA+QY T+TRPEI
Sbjct: 174  SKYIRDLLHKTNMAEAHSISSPMVSNCKLSRHGADAFHDPTLYRSVVGALQYATLTRPEI 233

Query: 690  SYAVNKVCQFMSTPLESHW 634
            S+ VNKVCQFM  PL+SHW
Sbjct: 234  SFVVNKVCQFMVAPLDSHW 252


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  236 bits (603), Expect(2) = e-113
 Identities = 120/195 (61%), Positives = 145/195 (74%)
 Frame = -1

Query: 650 LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
           L SH   VKRILRYLKGT+ +GL LQPA + +P  L             DR+STSG+A++
Sbjct: 344 LESHWNAVKRILRYLKGTMFYGLHLQPARVHQPFSLYAYCDADWAADPDDRRSTSGAAIF 403

Query: 470 LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
           LGPNLISWWS+KQ VVARSS EAEYRSLA  T E+ WI +LL EL +  + P I+CDNQS
Sbjct: 404 LGPNLISWWSRKQPVVARSSTEAEYRSLAQATSEVLWIQTLLHELRVPFSTPTIYCDNQS 463

Query: 290 AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            V+LAHNPVLH+RTKHME++LFFVR+KVL  QL V H+P +DQWAD LTKPLS++RF  L
Sbjct: 464 TVSLAHNPVLHSRTKHMEINLFFVREKVLANQLTVQHIPASDQWADALTKPLSSTRFLIL 523

Query: 110 RSKLQVVAPALASHP 66
           R KL+VV    +SHP
Sbjct: 524 RDKLKVVELPFSSHP 538



 Score =  202 bits (515), Expect(2) = e-113
 Identities = 100/137 (72%), Positives = 116/137 (84%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            YLLVYVDDII+TG+S    +QLI Q +S FSLKQLG L YFLGIEV+ L +G++LLTQSK
Sbjct: 212  YLLVYVDDIIITGNSFQFTQQLIDQLNSIFSLKQLGKLDYFLGIEVRHLQNGSVLLTQSK 271

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YIRDLL +TNM EANAISSPMVSSCKLSK G+D L D   Y+S+VGA+QY TITRPE+S+
Sbjct: 272  YIRDLLQRTNMLEANAISSPMVSSCKLSKHGSDTLADSTFYRSVVGALQYATITRPELSF 331

Query: 684  AVNKVCQFMSTPLESHW 634
            AVNKVCQFM+ PLESHW
Sbjct: 332  AVNKVCQFMAHPLESHW 348


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  234 bits (596), Expect(2) = e-113
 Identities = 112/193 (58%), Positives = 146/193 (75%)
 Frame = -1

Query: 644  SHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVYLG 465
            SH   VKRIL+YLKGT+++GL +QPA +  P+ L             DR+STSGSA++ G
Sbjct: 1166 SHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFG 1225

Query: 464  PNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQSAV 285
            PNLISWWS+KQ V+ARSS EAEYRS+A  + E++WI +LL EL +  + P + CDNQSAV
Sbjct: 1226 PNLISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQELKVPFSTPTLLCDNQSAV 1285

Query: 284  ALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFLRS 105
            A+AHNPV H++TKHME+D+FFVRDKVL KQL V+H+P  DQWAD+LTKPLS +RFE LR+
Sbjct: 1286 AIAHNPVFHSKTKHMEIDVFFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLRN 1345

Query: 104  KLQVVAPALASHP 66
            KL+V +  + + P
Sbjct: 1346 KLKVQSFCVKTSP 1358



 Score =  204 bits (520), Expect(2) = e-113
 Identities = 97/139 (69%), Positives = 118/139 (84%)
 Frame = -3

Query: 1050 TAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQ 871
            T ++LVYVDDII+TGSS+ LI+Q+  Q DS FSLKQLGSL YFLGIEVK LP  +L+LTQ
Sbjct: 1030 TIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQ 1089

Query: 870  SKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEI 691
            SKYIRDLL KTN+AEA+   SPM S+CKLS+ GND+  DP  ++S+VGA+QY T+TRPEI
Sbjct: 1090 SKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEI 1149

Query: 690  SYAVNKVCQFMSTPLESHW 634
            S+AVNKVCQFM+TPL+SHW
Sbjct: 1150 SFAVNKVCQFMATPLDSHW 1168


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  234 bits (596), Expect(2) = e-113
 Identities = 112/193 (58%), Positives = 146/193 (75%)
 Frame = -1

Query: 644  SHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVYLG 465
            SH   VKRIL+YLKGT+++GL +QPA +  P+ L             DR+STSGSA++ G
Sbjct: 1087 SHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFG 1146

Query: 464  PNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQSAV 285
            PNLISWWS+KQ V+ARSS EAEYRS+A  + E++WI +LL EL +  + P + CDNQSAV
Sbjct: 1147 PNLISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQELKVPFSTPTLLCDNQSAV 1206

Query: 284  ALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFLRS 105
            A+AHNPV H++TKHME+D+FFVRDKVL KQL V+H+P  DQWAD+LTKPLS +RFE LR+
Sbjct: 1207 AIAHNPVFHSKTKHMEIDVFFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLRN 1266

Query: 104  KLQVVAPALASHP 66
            KL+V +  + + P
Sbjct: 1267 KLKVQSFCVKTSP 1279



 Score =  204 bits (520), Expect(2) = e-113
 Identities = 97/139 (69%), Positives = 118/139 (84%)
 Frame = -3

Query: 1050 TAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQ 871
            T ++LVYVDDII+TGSS+ LI+Q+  Q DS FSLKQLGSL YFLGIEVK LP  +L+LTQ
Sbjct: 951  TIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQ 1010

Query: 870  SKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEI 691
            SKYIRDLL KTN+AEA+   SPM S+CKLS+ GND+  DP  ++S+VGA+QY T+TRPEI
Sbjct: 1011 SKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEI 1070

Query: 690  SYAVNKVCQFMSTPLESHW 634
            S+AVNKVCQFM+TPL+SHW
Sbjct: 1071 SFAVNKVCQFMATPLDSHW 1089


>gb|PNX54637.1| histone deacetylase [Trifolium pratense]
          Length = 389

 Score =  241 bits (614), Expect(2) = e-112
 Identities = 125/196 (63%), Positives = 145/196 (73%)
 Frame = -1

Query: 650 LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
           L SH   VKRILRYLKGT++H L L P    +P  ++            DR+STSG+AVY
Sbjct: 197 LESHWTAVKRILRYLKGTMDHHLRLHPLSSHQPPSIKAFCDADWASDPDDRRSTSGAAVY 256

Query: 470 LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
            GPNL+SWWS+KQ VVARSSAEAEYRSLA  T EI WI +LL EL +  T P + CDNQS
Sbjct: 257 FGPNLVSWWSRKQPVVARSSAEAEYRSLAHVTAEILWIQTLLQELLVPSTTPLVLCDNQS 316

Query: 290 AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
           AVALAHNPVLHARTKHME+DLFFVR+KVL KQLQV H+PGTDQWAD+ TKPLS+++F  L
Sbjct: 317 AVALAHNPVLHARTKHMEIDLFFVREKVLAKQLQVVHIPGTDQWADLFTKPLSSAKFLAL 376

Query: 110 RSKLQVVAPALASHPP 63
           R KL V     +SHPP
Sbjct: 377 RPKLNV---GSSSHPP 389



 Score =  195 bits (496), Expect(2) = e-112
 Identities = 95/137 (69%), Positives = 112/137 (81%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            Y LVYVDDIILTG+S +LI+  I Q + AFSLK LG L YFLGIEVK+LP G+L L QSK
Sbjct: 65   YFLVYVDDIILTGTSPSLIQSFITQLNQAFSLKHLGDLDYFLGIEVKSLPDGSLALNQSK 124

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YIRD+LT+T M   + +S+PM SSCKLSK G++ L DP MY+S+VGA+QY TITRPEISY
Sbjct: 125  YIRDILTRTKMLNCSPVSTPMQSSCKLSKLGSNALADPFMYRSVVGALQYATITRPEISY 184

Query: 684  AVNKVCQFMSTPLESHW 634
            +VNKVCQFMS PLESHW
Sbjct: 185  SVNKVCQFMSHPLESHW 201


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  230 bits (587), Expect(2) = e-112
 Identities = 111/193 (57%), Positives = 144/193 (74%)
 Frame = -1

Query: 644 SHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVYLG 465
           SH   VKRIL+YLKGT+++GL +QPA +  P+ L             DR+STSGSA++ G
Sbjct: 347 SHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFG 406

Query: 464 PNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQSAV 285
           PNLISWWS+KQ V+ARSS EAEYRS+A  + E++WI +LL EL +  + P + CDNQSAV
Sbjct: 407 PNLISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQELKVPFSTPTLLCDNQSAV 466

Query: 284 ALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFLRS 105
           A+AHNPV H++TKHME+D+FFVRDKVL KQL V+H+P  DQWAD+LTKPLS +RFE L  
Sbjct: 467 AIAHNPVFHSKTKHMEIDVFFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLWD 526

Query: 104 KLQVVAPALASHP 66
           KL+V +  + + P
Sbjct: 527 KLKVQSFCVKTSP 539



 Score =  204 bits (520), Expect(2) = e-112
 Identities = 97/139 (69%), Positives = 118/139 (84%)
 Frame = -3

Query: 1050 TAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQ 871
            T ++LVYVDDII+TGSS+ LI+Q+  Q DS FSLKQLGSL YFLGIEVK LP  +L+LTQ
Sbjct: 211  TIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQ 270

Query: 870  SKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEI 691
            SKYIRDLL KTN+AEA+   SPM S+CKLS+ GND+  DP  ++S+VGA+QY T+TRPEI
Sbjct: 271  SKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEI 330

Query: 690  SYAVNKVCQFMSTPLESHW 634
            S+AVNKVCQFM+TPL+SHW
Sbjct: 331  SFAVNKVCQFMATPLDSHW 349


>gb|PNX93473.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1181

 Score =  224 bits (572), Expect(2) = e-110
 Identities = 113/186 (60%), Positives = 138/186 (74%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L SH   VKRILRYLKGT + GL L P ++  PL L+            DR+STSG+A++
Sbjct: 992  LESHWTAVKRILRYLKGTSHIGLKLFPTNVHHPLSLKAYCDADWASDPDDRRSTSGAAIF 1051

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
             GPNL+SWWS+KQ VVARSS EAEYRSLA  T ++ W+ +LL EL +  T P I+CDNQS
Sbjct: 1052 FGPNLVSWWSRKQQVVARSSTEAEYRSLAQATADVLWVQTLLNELTVPFTTPTIYCDNQS 1111

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            AV LAHNPVLH+RTKHME+D+FFVR+KVL KQL V H+PG+ Q ADVLTKP+ST +F  +
Sbjct: 1112 AVLLAHNPVLHSRTKHMEIDVFFVREKVLAKQLTVVHIPGSTQLADVLTKPVSTDKFLSM 1171

Query: 110  RSKLQV 93
            RSKL V
Sbjct: 1172 RSKLNV 1177



 Score =  204 bits (518), Expect(2) = e-110
 Identities = 97/137 (70%), Positives = 118/137 (86%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            YLLVYVDDII+TGSS  L++ L+ + DS FSLKQLG+L YFLGIEVK L  G+LLLTQSK
Sbjct: 860  YLLVYVDDIIITGSSLTLVQHLVTKLDSVFSLKQLGNLDYFLGIEVKHLTDGSLLLTQSK 919

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YI+DLL KTNM ++N I++PM+SSCKLSK G+D + DP +Y+S+VG++QY TITRPEIS+
Sbjct: 920  YIKDLLVKTNMIDSNPIATPMMSSCKLSKVGSDNVADPTLYRSVVGSLQYATITRPEISF 979

Query: 684  AVNKVCQFMSTPLESHW 634
            AVNKVCQFMS PLESHW
Sbjct: 980  AVNKVCQFMSAPLESHW 996


>gb|PNY08092.1| histone deacetylase [Trifolium pratense]
          Length = 1339

 Score =  234 bits (596), Expect(2) = e-110
 Identities = 118/186 (63%), Positives = 139/186 (74%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L +H   VKRILRYLKGTI+ GL L P DI  PL LR            DR+STSG+A++
Sbjct: 1150 LETHWIAVKRILRYLKGTIDQGLKLLPTDIHHPLPLRVFCDADWASDPDDRRSTSGAAIF 1209

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
             GPNLISWWS+KQ VVARSS EAEYRSLA  T +  W+ +LL EL +    P I+CDNQS
Sbjct: 1210 FGPNLISWWSRKQQVVARSSTEAEYRSLAQATADALWVQTLLKELTVPFLAPVIYCDNQS 1269

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            AV LAHNP+LH+RTKHME+DLFFVR+KVL KQL V H+PGTDQ AD+LTKP+ST +F F+
Sbjct: 1270 AVLLAHNPILHSRTKHMEIDLFFVREKVLAKQLSVIHIPGTDQLADILTKPVSTDKFLFM 1329

Query: 110  RSKLQV 93
            RSKL V
Sbjct: 1330 RSKLNV 1335



 Score =  193 bits (491), Expect(2) = e-110
 Identities = 92/137 (67%), Positives = 115/137 (83%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            YLLVYVDDII+TGSS  L++ L+++ DS FSLKQLG+L YFLGIEV+ L   +LLLTQSK
Sbjct: 1018 YLLVYVDDIIITGSSITLVQTLVEKLDSVFSLKQLGNLDYFLGIEVQQLSDNSLLLTQSK 1077

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YI+DLL KTNM E   I++PM+SSCKLSK G++ + D  +Y+S+VG++QY TITRPEIS+
Sbjct: 1078 YIKDLLVKTNMLECKPIATPMMSSCKLSKVGSNTVADTTLYRSVVGSLQYATITRPEISF 1137

Query: 684  AVNKVCQFMSTPLESHW 634
            AVNKVCQFMS PLE+HW
Sbjct: 1138 AVNKVCQFMSAPLETHW 1154


>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1489

 Score =  229 bits (584), Expect(2) = e-109
 Identities = 116/186 (62%), Positives = 139/186 (74%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L SH   VKRILRYLKGT + GL L PA+I  PL LR            DR+STSG+A++
Sbjct: 1300 LESHWVAVKRILRYLKGTSHLGLRLFPANINHPLSLRAFCDADWASDPDDRRSTSGAAIF 1359

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
             GPNLISWWS+KQ VVARSS EAEYRSLA  T ++ W+ +LL EL +  T P ++CDNQS
Sbjct: 1360 FGPNLISWWSRKQQVVARSSTEAEYRSLAQITADVLWLQTLLKELTVPFTTPTVYCDNQS 1419

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            AV LAHNPVLH+RTKHME+DLFFVR+KV+ KQL V H+PGT Q AD+LTKP+ST +F  +
Sbjct: 1420 AVLLAHNPVLHSRTKHMEIDLFFVREKVIAKQLTVLHIPGTTQLADILTKPISTDKFLSI 1479

Query: 110  RSKLQV 93
            RSKL V
Sbjct: 1480 RSKLNV 1485



 Score =  197 bits (501), Expect(2) = e-109
 Identities = 94/137 (68%), Positives = 116/137 (84%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            YLLVYVDDII+TGSS  L++ L+ + DS FSLKQLG L YFLGIEVK L  G+LLLTQ+K
Sbjct: 1168 YLLVYVDDIIITGSSPDLVQHLVNKLDSVFSLKQLGELEYFLGIEVKNLSDGSLLLTQTK 1227

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YI+DLL KTNM ++N I++PM+SSCKLSK G+D + D  +Y+S+VG++QY TI+RPEIS+
Sbjct: 1228 YIKDLLIKTNMLDSNPIATPMMSSCKLSKIGSDNMNDATLYRSVVGSLQYATISRPEISF 1287

Query: 684  AVNKVCQFMSTPLESHW 634
            AVNKVCQFMS PLESHW
Sbjct: 1288 AVNKVCQFMSAPLESHW 1304


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  241 bits (616), Expect(2) = e-109
 Identities = 121/188 (64%), Positives = 142/188 (75%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L +H   VKRILRYLKGT++HGLLL PA   KP  L+            DR+STSG+A+Y
Sbjct: 1297 LETHWIAVKRILRYLKGTLDHGLLLSPALPPKPPSLKAFCDADWASDPDDRRSTSGAAIY 1356

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
             GPNL+SWWSKKQ VVARSS EAEYRSLA  T E+ WI +LLTEL +    P I CDNQS
Sbjct: 1357 FGPNLVSWWSKKQPVVARSSTEAEYRSLAHATAELLWIQTLLTELHVPFAAPTILCDNQS 1416

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            AV LAHNP++H+RTKHME+DLFFVR+KV+ KQL V H+PGTDQWADVLTKPLST++F  L
Sbjct: 1417 AVMLAHNPIMHSRTKHMEIDLFFVREKVISKQLSVLHIPGTDQWADVLTKPLSTAKFLSL 1476

Query: 110  RSKLQVVA 87
            R KL V +
Sbjct: 1477 RPKLNVAS 1484



 Score =  185 bits (469), Expect(2) = e-109
 Identities = 88/139 (63%), Positives = 113/139 (81%)
 Frame = -3

Query: 1050 TAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQ 871
            T YLLVYVDDII+T ++  L+   I + + AFSLK LG+L YFLGIEV  L SG+LLLTQ
Sbjct: 1163 TIYLLVYVDDIIITSNNTTLLHSTISKLNKAFSLKHLGNLDYFLGIEVHHLSSGSLLLTQ 1222

Query: 870  SKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEI 691
            SKY+RDLLT+T+M +++ +S+PM S+CKL+K G+  L DP MY+S+VGA+QY TITRPEI
Sbjct: 1223 SKYLRDLLTRTHMLDSSPVSTPMQSTCKLTKLGSSPLDDPFMYRSVVGALQYATITRPEI 1282

Query: 690  SYAVNKVCQFMSTPLESHW 634
            S++VNK CQFMS PLE+HW
Sbjct: 1283 SFSVNKACQFMSHPLETHW 1301


>gb|KYP56497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 391

 Score =  230 bits (586), Expect(2) = e-109
 Identities = 115/194 (59%), Positives = 144/194 (74%)
 Frame = -1

Query: 644 SHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVYLG 465
           SH   VKRILRYLKGT++HGL ++   + KP  +             DRKSTSGSA+YLG
Sbjct: 199 SHWVAVKRILRYLKGTLSHGLHMKSVVLGKPFSITAMCDSDWASDIDDRKSTSGSAIYLG 258

Query: 464 PNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQSAV 285
           PNLISWWS+KQ V ARSS EAEYRS+A T+ E++WI +LL EL +  + P + CDNQSAV
Sbjct: 259 PNLISWWSRKQQVTARSSTEAEYRSIAHTSAELTWIKALLQELQVPFSTPVLLCDNQSAV 318

Query: 284 ALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFLRS 105
           A+AHNPV H+RTKHME+D+FFVR++VL KQL V+H+P  DQWADVLTK LS +RF+FLR 
Sbjct: 319 AIAHNPVFHSRTKHMEIDVFFVREQVLSKQLLVYHIPVLDQWADVLTKSLSPARFQFLRD 378

Query: 104 KLQVVAPALASHPP 63
           KL V   + ++ PP
Sbjct: 379 KLNV--KSFSNKPP 390



 Score =  196 bits (497), Expect(2) = e-109
 Identities = 93/137 (67%), Positives = 115/137 (83%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            +LLVYVDDII+TGSS+  I+Q+  Q +S FSLKQLG L YFLGI++K LP  +LL+TQSK
Sbjct: 65   FLLVYVDDIIITGSSSQFIQQITDQLNSTFSLKQLGQLDYFLGIKIKHLPDKSLLMTQSK 124

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YI+DLL KT+MAEA+ ISSPM+S CKLSK G D   DP +Y+S+VGA+QY T+TRPEIS+
Sbjct: 125  YIQDLLHKTSMAEAHPISSPMLSGCKLSKTGADLFHDPTLYRSVVGALQYATLTRPEISF 184

Query: 684  AVNKVCQFMSTPLESHW 634
            AVNKVCQFM+ PL+SHW
Sbjct: 185  AVNKVCQFMANPLDSHW 201


>dbj|GAU31266.1| hypothetical protein TSUD_153410 [Trifolium subterraneum]
          Length = 844

 Score =  226 bits (575), Expect(2) = e-108
 Identities = 114/186 (61%), Positives = 137/186 (73%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L SH   VKRILRYLKGT   GL L P +I  PL ++            DR+STSG+A++
Sbjct: 655  LESHWAAVKRILRYLKGTSFSGLKLFPTNIHHPLSIKAYCDADWASDPDDRRSTSGAAIF 714

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
             GPNLISWWS+KQ VVARSS EAEYRSLA  T ++ W+ +LL EL +  T P I+CDNQS
Sbjct: 715  FGPNLISWWSRKQQVVARSSTEAEYRSLAQATADVLWVQTLLKELTVPFTTPTIYCDNQS 774

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            AV LAHNP+LH+RTKHME+D+FFVR+KVL KQL V H+PGT Q ADVLTKP+ST +F  +
Sbjct: 775  AVLLAHNPILHSRTKHMEIDVFFVREKVLVKQLTVVHIPGTTQLADVLTKPVSTDKFLSM 834

Query: 110  RSKLQV 93
            RSKL V
Sbjct: 835  RSKLNV 840



 Score =  197 bits (501), Expect(2) = e-108
 Identities = 94/138 (68%), Positives = 115/138 (83%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            YLLVYVDDII+ GSS  L++ L+ + D+ FSLKQLG L YFLGIEVK L  G+LLLTQ+K
Sbjct: 523  YLLVYVDDIIIIGSSPTLVQHLVDKLDAVFSLKQLGDLDYFLGIEVKHLKDGSLLLTQTK 582

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YI+DLL KTNM + N I++PM+SSCKLSK G+D + D  +Y+S+VG++QY TITRPEIS+
Sbjct: 583  YIKDLLVKTNMFDCNPIATPMMSSCKLSKVGSDNVADATLYRSVVGSLQYATITRPEISF 642

Query: 684  AVNKVCQFMSTPLESHWA 631
            AVNKVCQFM TPLESHWA
Sbjct: 643  AVNKVCQFMPTPLESHWA 660


>gb|KYP44504.1| hypothetical protein KK1_034024 [Cajanus cajan]
          Length = 367

 Score =  235 bits (600), Expect(2) = e-108
 Identities = 124/187 (66%), Positives = 139/187 (74%)
 Frame = -1

Query: 650 LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
           L  H   VKRILRYLKGTI+ GL LQPA  T    +             DR+STSG++++
Sbjct: 175 LEQHWIAVKRILRYLKGTISWGLHLQPATTTSSFSIHTYCDADWASDPDDRRSTSGASIF 234

Query: 470 LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
           LGPNL+SWWSKKQTVVARSS EAEYRSLAL   E+ WI +LL+EL + H+ P IFCDN S
Sbjct: 235 LGPNLVSWWSKKQTVVARSSTEAEYRSLALAAAEVMWIQTLLSELKVHHSTPVIFCDNMS 294

Query: 290 AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            VALAHNPVLHARTKHMELDLFFVR+KV  K+LQV HVP  DQ ADVLTK LS SRF  L
Sbjct: 295 TVALAHNPVLHARTKHMELDLFFVREKVAAKRLQVVHVPAIDQCADVLTKALSPSRFCEL 354

Query: 110 RSKLQVV 90
           RSKLQVV
Sbjct: 355 RSKLQVV 361



 Score =  185 bits (469), Expect(2) = e-108
 Identities = 89/141 (63%), Positives = 111/141 (78%)
 Frame = -3

Query: 1056 NATAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLL 877
            N   Y+LVYVDDII+TG++   ++ L+ +  SAFSLK LG L YFLGIEVK    G++ L
Sbjct: 39   NNIIYVLVYVDDIIITGNNATTLQTLVSRLHSAFSLKDLGDLDYFLGIEVKNQSDGSITL 98

Query: 876  TQSKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRP 697
            TQSKYIRDLL +T+M  A  ISSPMVS CKLSK G++ + DP++Y+S+VGA+QY TITRP
Sbjct: 99   TQSKYIRDLLNRTDMEAAKPISSPMVSGCKLSKLGSEKVFDPSLYRSVVGALQYATITRP 158

Query: 696  EISYAVNKVCQFMSTPLESHW 634
            EIS++VNKVCQFMS PLE HW
Sbjct: 159  EISFSVNKVCQFMSQPLEQHW 179


>gb|PNX95703.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 975

 Score =  212 bits (540), Expect(2) = e-107
 Identities = 105/184 (57%), Positives = 134/184 (72%)
 Frame = -1

Query: 644  SHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVYLG 465
            SH   VKRILRYLK T++ GL+L P D+ KP+ L+            DR+STSG+A++ G
Sbjct: 786  SHWTAVKRILRYLKETLHMGLVLYPFDVHKPISLKVFCDADWASDPDDRRSTSGAAIFFG 845

Query: 464  PNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQSAV 285
             +L+SWWS+KQ VVARSS EAEYRS A  T  + WI +LL EL I  + P I+CDNQSAV
Sbjct: 846  TSLVSWWSRKQQVVARSSTEAEYRSRAQATAYVLWIQTLLKELTIPFSQPIIYCDNQSAV 905

Query: 284  ALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFLRS 105
             LAHNP+LH RTKHME+DLFFVR+KV+ KQL + H+PG +Q AD+LTKP+ST++F  +  
Sbjct: 906  LLAHNPILHTRTKHMEIDLFFVREKVVAKQLTIVHIPGIEQCADILTKPVSTTKFLLMMD 965

Query: 104  KLQV 93
            KL V
Sbjct: 966  KLNV 969



 Score =  206 bits (525), Expect(2) = e-107
 Identities = 99/141 (70%), Positives = 119/141 (84%)
 Frame = -3

Query: 1056 NATAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLL 877
            N   YLLVYVDDII+TGSS+ L+  L+ + +S FSLKQLG L YFLGIEVK LP+  LLL
Sbjct: 648  NHIVYLLVYVDDIIITGSSSQLVTSLVHKLNSVFSLKQLGLLDYFLGIEVKHLPNSTLLL 707

Query: 876  TQSKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRP 697
            TQSKYIRDLLTKTNM E+N IS+PM+S+CKLSK G+D   DP++Y+S+VG++QY TITRP
Sbjct: 708  TQSKYIRDLLTKTNMLESNPISTPMMSTCKLSKVGSDKFHDPSLYRSVVGSLQYATITRP 767

Query: 696  EISYAVNKVCQFMSTPLESHW 634
            EI+YAVNKVCQFMS PL+SHW
Sbjct: 768  EIAYAVNKVCQFMSNPLDSHW 788


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 538

 Score =  231 bits (589), Expect(2) = e-107
 Identities = 119/187 (63%), Positives = 139/187 (74%)
 Frame = -1

Query: 650 LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
           L  H   VKRILRYLKGT+  GL LQPA    PL +R            DR+STSG++++
Sbjct: 345 LEQHWSAVKRILRYLKGTMFLGLHLQPAPSNSPLSIRAYCDADWASDPDDRRSTSGASIF 404

Query: 470 LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
           +GPNLISWWSKKQTVVARSSAEAEYRSLAL T E+ WI +LL+EL + H  P ++CDN S
Sbjct: 405 VGPNLISWWSKKQTVVARSSAEAEYRSLALATAEVLWIQTLLSELHVSHHTPVVYCDNMS 464

Query: 290 AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            VALAHNPVLHARTKHMELDLFFVR+KV    L V HVP  DQ+AD+LTK LS SRF  L
Sbjct: 465 TVALAHNPVLHARTKHMELDLFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCEL 524

Query: 110 RSKLQVV 90
           R+KL++V
Sbjct: 525 RTKLKLV 531



 Score =  187 bits (476), Expect(2) = e-107
 Identities = 89/142 (62%), Positives = 114/142 (80%)
 Frame = -3

Query: 1056 NATAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLL 877
            N   Y+LVYVDDII+TG++++ ++ +I Q +SAFSLK LG L +FLGIEVK+   G+L L
Sbjct: 209  NNVIYILVYVDDIIITGNNSSTLQNIIAQLNSAFSLKDLGRLDFFLGIEVKSNTDGSLTL 268

Query: 876  TQSKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRP 697
            TQSKYIRDLL +TNM  +N ISSPMVS CKLS+ G++   D  +Y+S+VGA+QY TITRP
Sbjct: 269  TQSKYIRDLLNRTNMENSNPISSPMVSGCKLSRTGSEKFLDVTLYRSVVGALQYATITRP 328

Query: 696  EISYAVNKVCQFMSTPLESHWA 631
            EIS++VNKVCQFMS PLE HW+
Sbjct: 329  EISFSVNKVCQFMSNPLEQHWS 350


>gb|KYP37943.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 390

 Score =  226 bits (575), Expect(2) = e-106
 Identities = 116/186 (62%), Positives = 136/186 (73%)
 Frame = -1

Query: 650 LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
           L  H   VKRILRYLKGT++ GL LQP     PL +             DR+STSG+A++
Sbjct: 197 LEQHWSAVKRILRYLKGTMSLGLHLQPTPPNSPLSIHAYYDVDWASDPDDRRSTSGAAIF 256

Query: 470 LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
           +GPNLISWWSKKQT+VARSS EAEYRSLAL TVE+ WI +LL+EL + H  P I+CDN S
Sbjct: 257 VGPNLISWWSKKQTIVARSSIEAEYRSLALATVEVLWIQTLLSELHVSHYSPVIYCDNMS 316

Query: 290 AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            +ALAHNPVLHARTKHMELDLFFVR+KV    L V HVP  DQ+ D+LTK LS SRF  L
Sbjct: 317 TIALAHNPVLHARTKHMELDLFFVREKVAANLLHVVHVPAIDQYTDILTKSLSPSRFCEL 376

Query: 110 RSKLQV 93
           RSKL++
Sbjct: 377 RSKLKL 382



 Score =  191 bits (484), Expect(2) = e-106
 Identities = 89/142 (62%), Positives = 114/142 (80%)
 Frame = -3

Query: 1056 NATAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLL 877
            N   Y+LVYVDDII+TG++ A ++ ++ Q +SAFSLK LG L YFLGIEVK+   G+L L
Sbjct: 61   NNVIYILVYVDDIIITGNNTAFLRNIVSQLNSAFSLKDLGRLDYFLGIEVKSNSDGSLTL 120

Query: 876  TQSKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRP 697
            TQSKY+ DLL +TNM  +N+I+SPMVS CKLSK G+D   D ++Y+S+VGA+QY TITRP
Sbjct: 121  TQSKYVLDLLNRTNMENSNSITSPMVSGCKLSKSGSDKFLDVSLYRSVVGALQYATITRP 180

Query: 696  EISYAVNKVCQFMSTPLESHWA 631
            EIS++VNKVCQFMS PLE HW+
Sbjct: 181  EISFSVNKVCQFMSNPLEQHWS 202


>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1516

 Score =  222 bits (566), Expect(2) = e-106
 Identities = 111/186 (59%), Positives = 136/186 (73%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L +H   VKRILRYLKGTI+ GL + P  +  PL L             DR+STSG+A++
Sbjct: 1321 LETHWIAVKRILRYLKGTIDFGLKISPTPVHHPLPLNVFCDADWAADPDDRRSTSGAALF 1380

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
             GPNLISWWS+KQ VVARSS EAEYRSLA  T +  W+ +LL EL +  T P ++CDN S
Sbjct: 1381 FGPNLISWWSRKQQVVARSSTEAEYRSLAQATADTLWVQTLLKELTVPFTAPVVYCDNLS 1440

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
            AV LAHNPVLH+RTKHME+DLFFVR+KVL KQL V H+PGTDQ AD+LTKP+S+ +F  +
Sbjct: 1441 AVHLAHNPVLHSRTKHMEIDLFFVREKVLAKQLSVLHIPGTDQLADILTKPISSDKFLLM 1500

Query: 110  RSKLQV 93
            R+KL V
Sbjct: 1501 RNKLNV 1506



 Score =  193 bits (491), Expect(2) = e-106
 Identities = 92/137 (67%), Positives = 113/137 (82%)
 Frame = -3

Query: 1044 YLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLLTQSK 865
            YLLVYVDDII+TGSS+ L++ L+Q+ DS FSLKQLG L YFLGIEVK  P  +LLLTQ K
Sbjct: 1189 YLLVYVDDIIITGSSSTLVQTLVQKLDSIFSLKQLGDLEYFLGIEVKRSPDSSLLLTQGK 1248

Query: 864  YIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRPEISY 685
            YI+DLL KTNM +   I++PM+SSCKLSK G+  + D  +Y+S+VG++QY TITRPEIS+
Sbjct: 1249 YIKDLLLKTNMLDCKPINTPMMSSCKLSKVGSTGMTDATLYRSVVGSLQYATITRPEISF 1308

Query: 684  AVNKVCQFMSTPLESHW 634
            AVNKVCQFMS PLE+HW
Sbjct: 1309 AVNKVCQFMSAPLETHW 1325


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  235 bits (600), Expect(2) = e-106
 Identities = 123/187 (65%), Positives = 140/187 (74%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L  H   VKRILRYLKGT + GL LQPA  +  L +             DR+STSG++++
Sbjct: 1216 LTHHWAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIF 1275

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
            LGPNL+SWWSKKQTVVARSS EAEYRSLAL T E++WI +LL+EL + H+ P IFCDN S
Sbjct: 1276 LGPNLVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKVTHSTPIIFCDNLS 1335

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
             VALAHNPVLHARTKHMELDLFFVR+KV  K LQV HVP  DQ ADVLTK LS +RF  L
Sbjct: 1336 TVALAHNPVLHARTKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCEL 1395

Query: 110  RSKLQVV 90
            RSKLQVV
Sbjct: 1396 RSKLQVV 1402



 Score =  180 bits (457), Expect(2) = e-106
 Identities = 86/142 (60%), Positives = 112/142 (78%)
 Frame = -3

Query: 1056 NATAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLL 877
            N   Y+LVYVDDII+TG++++++  L+ Q  S FSLK LG L +FLGIEVK+ P G+L+L
Sbjct: 1080 NNVIYILVYVDDIIITGNNSSILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLIL 1139

Query: 876  TQSKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRP 697
            TQSKYIRDLL +T+M  +  ISSPM+S  KLSK G++   D ++Y+S+VGA+QY TITRP
Sbjct: 1140 TQSKYIRDLLNRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRP 1199

Query: 696  EISYAVNKVCQFMSTPLESHWA 631
            EIS++VNKVCQFMS PL  HWA
Sbjct: 1200 EISFSVNKVCQFMSHPLTHHWA 1221


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  235 bits (600), Expect(2) = e-106
 Identities = 123/187 (65%), Positives = 140/187 (74%)
 Frame = -1

Query: 650  LLSHIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVY 471
            L  H   VKRILRYLKGT + GL LQPA  +  L +             DR+STSG++++
Sbjct: 881  LTHHWAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIF 940

Query: 470  LGPNLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQS 291
            LGPNL+SWWSKKQTVVARSS EAEYRSLAL T E++WI +LL+EL + H+ P IFCDN S
Sbjct: 941  LGPNLVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKVTHSTPIIFCDNLS 1000

Query: 290  AVALAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFL 111
             VALAHNPVLHARTKHMELDLFFVR+KV  K LQV HVP  DQ ADVLTK LS +RF  L
Sbjct: 1001 TVALAHNPVLHARTKHMELDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCEL 1060

Query: 110  RSKLQVV 90
            RSKLQVV
Sbjct: 1061 RSKLQVV 1067



 Score =  180 bits (457), Expect(2) = e-106
 Identities = 86/142 (60%), Positives = 112/142 (78%)
 Frame = -3

Query: 1056 NATAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLL 877
            N   Y+LVYVDDII+TG++++++  L+ Q  S FSLK LG L +FLGIEVK+ P G+L+L
Sbjct: 745  NNVIYILVYVDDIIITGNNSSILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLIL 804

Query: 876  TQSKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRP 697
            TQSKYIRDLL +T+M  +  ISSPM+S  KLSK G++   D ++Y+S+VGA+QY TITRP
Sbjct: 805  TQSKYIRDLLNRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRP 864

Query: 696  EISYAVNKVCQFMSTPLESHWA 631
            EIS++VNKVCQFMS PL  HWA
Sbjct: 865  EISFSVNKVCQFMSHPLTHHWA 886


>gb|KYP45673.1| Copia protein [Cajanus cajan]
          Length = 390

 Score =  229 bits (583), Expect(2) = e-106
 Identities = 118/183 (64%), Positives = 136/183 (74%)
 Frame = -1

Query: 641 HIGLVKRILRYLKGTINHGLLLQPADITKPLQLRXXXXXXXXXXXXDRKSTSGSAVYLGP 462
           H   VKRILRYLKGT++ GL LQPA    PL +             DR+STSG+A+++GP
Sbjct: 200 HWSAVKRILRYLKGTMSLGLHLQPAPTNSPLSIHAYCDADWASDPDDRRSTSGAAIFVGP 259

Query: 461 NLISWWSKKQTVVARSSAEAEYRSLALTTVEISWIHSLLTELGILHTVPQIFCDNQSAVA 282
           NLISWWSKKQ VVARSS EAEYRSLAL T E+ WI +LL+EL + H  P I+CDN S VA
Sbjct: 260 NLISWWSKKQIVVARSSTEAEYRSLALATAEVLWIQTLLSELHVSHHSPVIYCDNMSTVA 319

Query: 281 LAHNPVLHARTKHMELDLFFVRDKVLFKQLQVFHVPGTDQWADVLTKPLSTSRFEFLRSK 102
           LAHNPVLHARTKHMELDLFFVR+KV    L V HVP TDQ+AD+LTK LS SRF  LRSK
Sbjct: 320 LAHNPVLHARTKHMELDLFFVREKVAANLLHVVHVPATDQYADILTKSLSPSRFCELRSK 379

Query: 101 LQV 93
           L++
Sbjct: 380 LKL 382



 Score =  187 bits (474), Expect(2) = e-106
 Identities = 87/142 (61%), Positives = 111/142 (78%)
 Frame = -3

Query: 1056 NATAYLLVYVDDIILTGSSNALIKQLIQQFDSAFSLKQLGSLGYFLGIEVKTLPSGNLLL 877
            N   Y+LVYVDDII+ G++   ++ ++ Q +SAFSLK LG L YFLGIEVK    G+L L
Sbjct: 61   NNVIYILVYVDDIIINGNNTTFLRNIVSQLNSAFSLKDLGRLDYFLGIEVKPNSDGSLTL 120

Query: 876  TQSKYIRDLLTKTNMAEANAISSPMVSSCKLSKQGNDYLPDPAMYKSIVGAIQYTTITRP 697
            TQSKYI DLL +TNM  +N+I+SPMVS CKLSK G+D   D ++Y+S+VGA+QY TITRP
Sbjct: 121  TQSKYIHDLLNRTNMENSNSITSPMVSGCKLSKSGSDKFLDVSLYRSVVGALQYATITRP 180

Query: 696  EISYAVNKVCQFMSTPLESHWA 631
            E+S++VNKVCQFMS PLE HW+
Sbjct: 181  EVSFSVNKVCQFMSNPLEHHWS 202