BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00020035
         (265 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX56669.1| retrovirus-related Pol polyprotein from transposo...   116   4e-31
gb|PNX83260.1| retrovirus-related Pol polyprotein from transposo...   112   2e-30
gb|KYP57480.1| Retrovirus-related Pol polyprotein from transposo...   112   3e-29
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   118   6e-29
gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposo...   116   2e-28
gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposo...   115   4e-28
gb|PNX98657.1| gag-pol polyprotein, partial [Trifolium pratense]      115   6e-28
gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]   115   6e-28
gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]   115   8e-28
gb|PNX83704.1| copia-type polyprotein, partial [Trifolium pratense]   114   9e-28
gb|KYP44457.1| Retrovirus-related Pol polyprotein from transposo...   114   1e-27
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen...   114   1e-27
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   114   1e-27
gb|PNX85643.1| copia-type polyprotein [Trifolium pratense]            111   1e-27
dbj|GAU42085.1| hypothetical protein TSUD_200730 [Trifolium subt...   114   1e-27
gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   114   1e-27
gb|KYP72522.1| Retrovirus-related Pol polyprotein from transposo...   105   2e-27
dbj|GAU44245.1| hypothetical protein TSUD_139380 [Trifolium subt...   113   2e-27
gb|PNX62933.1| retrovirus-related Pol polyprotein from transposo...   104   2e-27
dbj|GAU18821.1| hypothetical protein TSUD_228110 [Trifolium subt...   114   2e-27

>gb|PNX56669.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 167

 Score =  116 bits (290), Expect = 4e-31
 Identities = 56/87 (64%), Positives = 62/87 (71%)
 Frame = -2

Query: 261 REPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSAA 82
           R+  PKKSSWRA+ KLEL+H DICGPI PESN KK+YFITF DD SRRTW+YF+ EKS A
Sbjct: 15  RKNVPKKSSWRASTKLELVHLDICGPINPESNGKKRYFITFTDDLSRRTWIYFMNEKSEA 74

Query: 81  LXXXXXXXXXXXXESGEKIGCLRTDRG 1
           L            ES E I CLRTDRG
Sbjct: 75  LAMFKKFKVMVENESKESIQCLRTDRG 101


>gb|PNX83260.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 111

 Score =  112 bits (281), Expect = 2e-30
 Identities = 53/87 (60%), Positives = 63/87 (72%)
 Frame = -2

Query: 261 REPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSAA 82
           ++  PKKSSWRA+ KLEL+H+DICGPI PESN KK+YFITFIDD SR+TW+YF+ EKS A
Sbjct: 25  KQSAPKKSSWRASAKLELVHSDICGPINPESNVKKRYFITFIDDLSRKTWIYFMNEKSDA 84

Query: 81  LXXXXXXXXXXXXESGEKIGCLRTDRG 1
           L            ES + I C RTDRG
Sbjct: 85  LTMFKRFKALVENESKQAIQCFRTDRG 111


>gb|KYP57480.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 216

 Score =  112 bits (281), Expect = 3e-29
 Identities = 53/88 (60%), Positives = 64/88 (72%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HREP PKKS WRA++KL+LIHADICGPI P SN++K+YF+ FIDD+SR++WVYFL EKS 
Sbjct: 38  HREPMPKKSKWRASQKLQLIHADICGPITPASNNQKRYFLCFIDDYSRKSWVYFLLEKSE 97

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           AL            ESG  +   RTDRG
Sbjct: 98  ALYHFKCFKTLVEKESGLPVKVFRTDRG 125


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  118 bits (295), Expect = 6e-29
 Identities = 56/88 (63%), Positives = 65/88 (73%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+P PKKS+WRATKKL+LIHA+ICGP+ P SN KK+Y + FIDDFSR+TWVYFL EKS 
Sbjct: 444 HRDPIPKKSAWRATKKLQLIHANICGPVTPTSNGKKRYALCFIDDFSRKTWVYFLVEKSK 503

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           AL            E+G  I CLRTDRG
Sbjct: 504 ALNSFKCFKRLVEKETGMYIKCLRTDRG 531


>gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 560

 Score =  116 bits (290), Expect = 2e-28
 Identities = 54/88 (61%), Positives = 65/88 (73%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+P PKK++WRAT+KL+LIHADICGPI P SNSKK+Y I FIDDF+ +TW+YF+ EKS 
Sbjct: 445 HRDPIPKKANWRATQKLQLIHADICGPISPTSNSKKRYLICFIDDFTMKTWIYFMVEKSE 504

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           AL            ESG  I CLRTD+G
Sbjct: 505 ALVIFKHYKNYVEKESGCSIKCLRTDQG 532


>gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 551

 Score =  115 bits (288), Expect = 4e-28
 Identities = 54/88 (61%), Positives = 63/88 (71%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+P PKKS WRA +KLELIHADICGPI P SNS+K+YF+ FIDD++R+ W+YFL EKS 
Sbjct: 169 HRDPIPKKSQWRAKQKLELIHADICGPIIPSSNSQKRYFLCFIDDYTRKAWIYFLTEKSE 228

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             ESG  I CLRTDRG
Sbjct: 229 AFHYFQCFKNLVEKESGLMIKCLRTDRG 256


>gb|PNX98657.1| gag-pol polyprotein, partial [Trifolium pratense]
          Length = 784

 Score =  115 bits (288), Expect = 6e-28
 Identities = 55/87 (63%), Positives = 64/87 (73%)
 Frame = -2

Query: 261 REPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSAA 82
           R+  PKKS WRA++KL+LIH+DICGPI PESN KK+YFITFIDD SR+TW+YFL EKS A
Sbjct: 163 RQSMPKKSPWRASEKLQLIHSDICGPINPESNGKKRYFITFIDDLSRKTWIYFLSEKSEA 222

Query: 81  LXXXXXXXXXXXXESGEKIGCLRTDRG 1
           L            E+  KI CLRTDRG
Sbjct: 223 LTIFQKFKAIVENETKLKIQCLRTDRG 249


>gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1326

 Score =  115 bits (288), Expect = 6e-28
 Identities = 54/88 (61%), Positives = 64/88 (72%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+P PKKS+WRAT+KLELIHAD+CGPI P SNS K+Y + FIDD+SR++WVYFL EKS 
Sbjct: 473 HRDPIPKKSNWRATQKLELIHADVCGPISPSSNSNKRYILLFIDDYSRKSWVYFLVEKSE 532

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           AL            E+   I CLRTDRG
Sbjct: 533 ALNSFKCFKTMVEKEAEMAIKCLRTDRG 560


>gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1062

 Score =  115 bits (287), Expect = 8e-28
 Identities = 56/88 (63%), Positives = 66/88 (75%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HREPF K S+ RATK+L+LIHAD+ GPIKPESNS K+YF+TFIDDFSR+TWVYFL EKS+
Sbjct: 495 HREPFLKVSTRRATKRLQLIHADVFGPIKPESNSNKRYFLTFIDDFSRKTWVYFLSEKSS 554

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
            L            E+ + I CLRTDRG
Sbjct: 555 VLEMFKKFKAMVEKETSDAICCLRTDRG 582


>gb|PNX83704.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 598

 Score =  114 bits (286), Expect = 9e-28
 Identities = 54/87 (62%), Positives = 63/87 (72%)
 Frame = -2

Query: 261 REPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSAA 82
           R+  PKKSSWRA+ KLEL+H+DICGPI PESN +K+YFITF DD SRRTW+YF+ EKS A
Sbjct: 490 RKNVPKKSSWRASTKLELVHSDICGPINPESNGRKRYFITFTDDLSRRTWIYFMNEKSEA 549

Query: 81  LXXXXXXXXXXXXESGEKIGCLRTDRG 1
           L            E+ E I CLRTDRG
Sbjct: 550 LAMFRKFKVMVENEAKESIQCLRTDRG 576


>gb|KYP44457.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  114 bits (286), Expect = 1e-27
 Identities = 54/88 (61%), Positives = 63/88 (71%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+P PKKS WRA +KLELIHADICGPI P SNS+K+YF+ FIDD+SR+TW+YFL +KS 
Sbjct: 477 HRDPIPKKSQWRAKQKLELIHADICGPITPSSNSQKRYFLCFIDDYSRKTWIYFLTKKSE 536

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             ESG  I CL TDRG
Sbjct: 537 AFHYFQCFKNLVEKESGLMIKCLITDRG 564


>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1044

 Score =  114 bits (286), Expect = 1e-27
 Identities = 54/88 (61%), Positives = 65/88 (73%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HRE  PKKS WRA+ +L+LIH+DICGPIKP SNS+K+Y I+FIDD+SR+TWVYFL EKS 
Sbjct: 195 HRESIPKKSMWRASHRLQLIHSDICGPIKPLSNSRKRYLISFIDDYSRKTWVYFLYEKSQ 254

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             E+G+ I CLRTDRG
Sbjct: 255 AFTTFKSFKCLVEKETGDYIQCLRTDRG 282


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  114 bits (286), Expect = 1e-27
 Identities = 54/88 (61%), Positives = 65/88 (73%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HRE  PKKS WRA+ +L+LIH+DICGPIKP SNS+K+Y I+FIDD+SR+TWVYFL EKS 
Sbjct: 476 HRESIPKKSMWRASHRLQLIHSDICGPIKPLSNSRKRYLISFIDDYSRKTWVYFLYEKSQ 535

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             E+G+ I CLRTDRG
Sbjct: 536 AFTTFKSFKCLVEKETGDYIQCLRTDRG 563


>gb|PNX85643.1| copia-type polyprotein [Trifolium pratense]
          Length = 339

 Score =  111 bits (278), Expect = 1e-27
 Identities = 53/87 (60%), Positives = 63/87 (72%)
 Frame = -2

Query: 261 REPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSAA 82
           ++  PKKSSWRA+ KLELIH+DICGPI PESN KK+YFITF +D SR+TW+YF+ EKS A
Sbjct: 33  KQTVPKKSSWRASVKLELIHSDICGPINPESNGKKRYFITFTNDLSRKTWIYFMNEKSEA 92

Query: 81  LXXXXXXXXXXXXESGEKIGCLRTDRG 1
           L            ES + I CLRTDRG
Sbjct: 93  LAMIKKFKVIVENESKKMIQCLRTDRG 119


>dbj|GAU42085.1| hypothetical protein TSUD_200730 [Trifolium subterraneum]
          Length = 1236

 Score =  114 bits (285), Expect = 1e-27
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+  PK S W++TK+LELIH+DICGPI P SNS  KY +TFIDD+SR+TWVYFLK KS+
Sbjct: 335 HRDSIPKTSKWKSTKRLELIHSDICGPITPSSNSDNKYVLTFIDDYSRKTWVYFLKNKSS 394

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             E+GE I CLRTDRG
Sbjct: 395 AFDQFKKFKSMVEKETGEAICCLRTDRG 422


>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  114 bits (285), Expect = 1e-27
 Identities = 53/88 (60%), Positives = 65/88 (73%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HRE  PKKS WRA+ +L+LIH+DICGPIKP SN++K+Y I+FIDD+SR+TWVYFL EKS 
Sbjct: 474 HRESIPKKSMWRASHRLQLIHSDICGPIKPLSNNRKRYLISFIDDYSRKTWVYFLNEKSQ 533

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             E+G+ I CLRTDRG
Sbjct: 534 AFTTFKSFKCLVEKETGDYIQCLRTDRG 561


>gb|KYP72522.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
 gb|KYP72574.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 123

 Score =  105 bits (263), Expect = 2e-27
 Identities = 52/88 (59%), Positives = 57/88 (64%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR  FP   SWRA   LEL+H+DIC PI P SN  KKYFITF DDFSR+TWVYFL+EKS 
Sbjct: 24  HRSQFPNGKSWRAKSVLELVHSDICDPINPSSNGGKKYFITFTDDFSRKTWVYFLQEKSE 83

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           AL            ESG+ I   RTDRG
Sbjct: 84  ALSSFKSFKARVETESGKTIKSFRTDRG 111


>dbj|GAU44245.1| hypothetical protein TSUD_139380 [Trifolium subterraneum]
          Length = 473

 Score =  113 bits (282), Expect = 2e-27
 Identities = 53/88 (60%), Positives = 64/88 (72%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+ FPK++SWRA++KLEL+H+DICGPI P SN+  KYFITF DDFSR+TW+YFLKEKS 
Sbjct: 301 HRDSFPKQASWRASQKLELVHSDICGPITPGSNAGNKYFITFTDDFSRKTWIYFLKEKSE 360

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             ES   + CLRTDRG
Sbjct: 361 AFEVFKKFKVLVEKESKCVVQCLRTDRG 388


>gb|PNX62933.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 93

 Score =  104 bits (260), Expect = 2e-27
 Identities = 50/88 (56%), Positives = 59/88 (67%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           HR+  PK +SWRA+ KLELIH+DICGPI P SN   +YFITF DDFSR+ W Y LK+KS+
Sbjct: 5   HRDSIPKTASWRASNKLELIHSDICGPINPSSNGGCRYFITFTDDFSRKIWTYPLKDKSS 64

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           A             ES  +I CLRTDRG
Sbjct: 65  AFEVFKKFKALVEKESNHQIKCLRTDRG 92


>dbj|GAU18821.1| hypothetical protein TSUD_228110 [Trifolium subterraneum]
          Length = 1013

 Score =  114 bits (284), Expect = 2e-27
 Identities = 55/88 (62%), Positives = 62/88 (70%)
 Frame = -2

Query: 264 HREPFPKKSSWRATKKLELIHADICGPIKPESNSKKKYFITFIDDFSRRTWVYFLKEKSA 85
           H+E   KKSSWRA+ KLELIH DICGPI PESN KK+YFITFIDD SR++WVYFL EKS 
Sbjct: 453 HKEVVSKKSSWRASIKLELIHLDICGPITPESNGKKRYFITFIDDMSRKSWVYFLNEKSE 512

Query: 84  ALXXXXXXXXXXXXESGEKIGCLRTDRG 1
           AL             +  KI CLRTD+G
Sbjct: 513 ALVIFQKFKIMVENATQHKIQCLRTDKG 540