BLASTX nr result
ID: Astragalus23_contig00019895
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00019895
(734 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021836735.1| uncharacterized protein LOC110776486 [Spinac... 88 1e-18
ref|WP_093336490.1| ribonuclease H [Salibacterium halotolerans] ... 74 3e-12
ref|WP_090927013.1| ribonuclease H [Salibacterium qingdaonense] ... 73 6e-12
ref|WP_031539932.1| MULTISPECIES: ribonuclease H [Bacillus] 71 3e-11
ref|WP_094909003.1| ribonuclease H [Marinococcus halophilus] >gi... 70 4e-11
ref|WP_079474323.1| ribonuclease H [Marinococcus halophilus] 70 5e-11
ref|WP_091586130.1| MULTISPECIES: ribonuclease H [Bacillaceae] >... 70 6e-11
ref|WP_091616116.1| ribonuclease H [Marinococcus luteus] >gi|108... 69 1e-10
ref|WP_015594268.1| ribonuclease H [Bacillus sp. 1NLA3E] >gi|484... 69 2e-10
ref|WP_017071180.1| ribonuclease HI, partial [Vibrio crassostrea... 69 2e-10
gb|PIV61531.1| ribonuclease H, partial [Bacteroidetes bacterium ... 64 2e-10
ref|WP_075566016.1| ribonuclease H [Prevotellaceae bacterium Mar... 69 3e-10
ref|WP_094190211.1| hypothetical protein [Bacillus sp. JCM 19035] 65 3e-10
ref|WP_062125669.1| ribonuclease H [Geofilum rubicundum] >gi|786... 68 3e-10
ref|WP_088352590.1| ribonuclease H [Polaribacter haliotis] 68 4e-10
ref|WP_027847416.1| ribonuclease H [Marinococcus halotolerans] 68 4e-10
ref|WP_079737713.1| ribonuclease H [Polaribacter sp. KT 15] >gi|... 68 5e-10
gb|EAQ51717.1| hypothetical ribonuclease HI [Vibrio sp. MED222] 65 5e-10
ref|WP_090399368.1| ribonuclease H [Natribacillus halophilus] >g... 67 7e-10
ref|WP_026703344.1| ribonuclease H [Bacillus aidingensis] 67 8e-10
>ref|XP_021836735.1| uncharacterized protein LOC110776486 [Spinacia oleracea]
Length = 98
Score = 87.8 bits (216), Expect = 1e-18
Identities = 36/55 (65%), Positives = 48/55 (87%)
Frame = -3
Query: 510 FSYYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVS 346
FS+YVVWNGR PG+Y+SW+ECSKQV GFKNA+F+GF+ L+ A AAF+ K++ P+S
Sbjct: 25 FSHYVVWNGRKPGVYESWDECSKQVKGFKNATFRGFYDLESAVAAFKRKEEGPLS 79
>ref|WP_093336490.1| ribonuclease H [Salibacterium halotolerans]
emb|SFP58044.1| ribonuclease HI [Salibacterium halotolerans]
Length = 201
Score = 73.6 bits (179), Expect = 3e-12
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQN 367
YYVVW GRNPGIYD+W EC KQV GF ASFK F S +A AFQN
Sbjct: 7 YYVVWKGRNPGIYDNWQECEKQVKGFAGASFKSFRSKAEAEQAFQN 52
>ref|WP_090927013.1| ribonuclease H [Salibacterium qingdaonense]
emb|SFM03797.1| ribonuclease HI [Salibacterium qingdaonense]
Length = 201
Score = 72.8 bits (177), Expect = 6e-12
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQN 367
YYVVW GRNPGIYD+W EC KQV GF ASFK F S +A AFQN
Sbjct: 7 YYVVWKGRNPGIYDNWPECEKQVKGFAGASFKSFRSKAEAEQAFQN 52
>ref|WP_031539932.1| MULTISPECIES: ribonuclease H [Bacillus]
Length = 208
Score = 70.9 bits (172), Expect = 3e-11
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVSTLQDKAF 325
YYVVWNGR PGIY +W EC KQ GFK A+FK + SL++A AF + KA
Sbjct: 6 YYVVWNGRKPGIYRTWAECEKQTKGFKGAAFKSYQSLEEAEKAFNQG-----GSFGQKAA 60
Query: 324 EDSSSERCPNCEL 286
+ SSS++ N L
Sbjct: 61 KGSSSKKQANTSL 73
>ref|WP_094909003.1| ribonuclease H [Marinococcus halophilus]
gb|OZT79026.1| ribonuclease H [Marinococcus halophilus]
Length = 196
Score = 70.5 bits (171), Expect = 4e-11
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPV----STLQ 337
+YVVW G+ PGIY +W EC KQV GFK A FK F S ++A AAF N P S +
Sbjct: 6 WYVVWRGKKPGIYSTWAECEKQVKGFKGAKFKSFPSYEEAEAAFNNSTLKPEAENGSYIT 65
Query: 336 DKAFEDSSSERCPN-CELLSLRIKVLEAHLAYYSEKNATPSPSKEQSVPHILAELSE 169
+ D+ S P E + K E A+ K T + ++ + H L L E
Sbjct: 66 ESISVDAGSHGNPGPVEYRGVYTKTEEIVFAHPGFKKGTNNMAEFLGIVHALQYLKE 122
>ref|WP_079474323.1| ribonuclease H [Marinococcus halophilus]
Length = 196
Score = 70.1 bits (170), Expect = 5e-11
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPV----STLQ 337
+YVVW G+ PGIY +W EC KQV GFK A FK F S ++A AAF N P S +
Sbjct: 6 WYVVWKGKKPGIYTTWAECEKQVKGFKGAKFKSFPSYEEAEAAFNNSTLKPEAENGSYIT 65
Query: 336 DKAFEDSSSERCPN-CELLSLRIKVLEAHLAYYSEKNATPSPSKEQSVPHILAELSE 169
+ D+ S P E + K E A+ K T + ++ + H L L E
Sbjct: 66 ESISVDAGSHGNPGPVEYRGVYTKTEEIVFAHPGFKKGTNNMAEFLGIVHALQYLKE 122
>ref|WP_091586130.1| MULTISPECIES: ribonuclease H [Bacillaceae]
emb|SDI52023.1| ribonuclease HI [Alteribacillus bidgolensis]
Length = 200
Score = 70.1 bits (170), Expect = 6e-11
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAF--QNKDDHPVSTLQDK 331
+YVVW GR PGIY SW+EC KQV GF ASF+ F S ++A AF +NKD PV+ ++
Sbjct: 6 FYVVWKGRKPGIYSSWSECEKQVKGFSGASFRSFLSKEEAERAFNNENKDILPVNKESNQ 65
Query: 330 AFEDSS 313
+ + S
Sbjct: 66 PYIEES 71
>ref|WP_091616116.1| ribonuclease H [Marinococcus luteus]
emb|SDW88692.1| ribonuclease HI [Marinococcus luteus]
Length = 196
Score = 69.3 bits (168), Expect = 1e-10
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPV----STLQ 337
+YVVW G+ PGIY +W EC KQV GFK A FK F S ++A AAF P S +
Sbjct: 6 WYVVWKGKKPGIYSTWAECEKQVKGFKGAKFKSFPSYEEAEAAFNGSGGKPETENGSYIT 65
Query: 336 DKAFEDSSSERCPN-CELLSLRIKVLEAHLAYYSEKNATPSPSKEQSVPHILAELSE 169
+ D+ S P E + K E A+ K T + ++ + H L L E
Sbjct: 66 ESISVDAGSHGNPGPVEYRGVYTKTEEIVFAHPGFKKGTNNMAEFLGIVHALRYLKE 122
>ref|WP_015594268.1| ribonuclease H [Bacillus sp. 1NLA3E]
gb|AGK54212.1| double-stranded RNA/RNA-DNA hybrid binding protein [Bacillus sp.
1NLA3E]
Length = 209
Score = 68.9 bits (167), Expect = 2e-10
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQN-KDDHPVSTLQDKA 328
YYVVW GRN G++ SW +C KQ GF+ ASFK F SL++AN A+ N K ++ S +++
Sbjct: 7 YYVVWAGRNTGVFRSWADCEKQTKGFQGASFKSFPSLEEANQAYSNGKPNYSFSKVKNAT 66
Query: 327 FEDSSSE 307
+ SSE
Sbjct: 67 KKSGSSE 73
>ref|WP_017071180.1| ribonuclease HI, partial [Vibrio crassostreae]
gb|OED88930.1| ribonuclease HI, partial [Vibrio crassostreae ZF-91]
Length = 246
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/99 (34%), Positives = 50/99 (50%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVSTLQDKAF 325
YYVVW GR PGI+ +WNEC QV GF A +K F +LD+A +AF K + K
Sbjct: 5 YYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLDEAESAFGGKTSSASGSTATKPS 64
Query: 324 EDSSSERCPNCELLSLRIKVLEAHLAYYSEKNATPSPSK 208
S S + L +I + + +++ P+P +
Sbjct: 65 SASKSTKAKVPPLSEQQITDMPFDIKIFTDGACEPNPGE 103
>gb|PIV61531.1| ribonuclease H, partial [Bacteroidetes bacterium
CG02_land_8_20_14_3_00_31_25]
Length = 45
Score = 64.3 bits (155), Expect = 2e-10
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDA 385
YYVVW G NPGIYD+WN+C +QV GF+NA +K + +L++A
Sbjct: 5 YYVVWKGLNPGIYDNWNDCKEQVDGFENAQYKSYKTLEEA 44
>ref|WP_075566016.1| ribonuclease H [Prevotellaceae bacterium Marseille-P2826]
Length = 237
Score = 68.9 bits (167), Expect = 3e-10
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPV---STLQD 334
YYVVW G NPG+YD+WN+C++QV GF NA +K F + + A AFQ + + +T ++
Sbjct: 7 YYVVWQGHNPGVYDNWNDCAEQVKGFSNARYKAFDTAEAAQQAFQEAPEQHITSRATSEE 66
Query: 333 KA 328
KA
Sbjct: 67 KA 68
>ref|WP_094190211.1| hypothetical protein [Bacillus sp. JCM 19035]
Length = 81
Score = 65.1 bits (157), Expect = 3e-10
Identities = 31/73 (42%), Positives = 40/73 (54%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVSTLQDKAF 325
YYVVW GR GI+ SW+EC QV GF A FK F +L +A +A VS+ K+F
Sbjct: 6 YYVVWKGRKTGIFLSWSECEAQVKGFTGARFKSFPTLAEAESALNGGTKRTVSSSSTKSF 65
Query: 324 EDSSSERCPNCEL 286
+ S C +L
Sbjct: 66 KQKKSNACRPSDL 78
>ref|WP_062125669.1| ribonuclease H [Geofilum rubicundum]
dbj|GAO30586.1| ribonuclease HI-related protein 3 [Geofilum rubicundum JCM 15548]
Length = 209
Score = 68.2 bits (165), Expect = 3e-10
Identities = 27/47 (57%), Positives = 38/47 (80%)
Frame = -3
Query: 507 SYYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQN 367
+YYVVW GR PGIY +W++C QVFGF+ AS+K F+S ++A+AA +N
Sbjct: 9 AYYVVWTGRKPGIYKTWDDCKAQVFGFEKASYKKFNSPEEADAALKN 55
>ref|WP_088352590.1| ribonuclease H [Polaribacter haliotis]
Length = 211
Score = 68.2 bits (165), Expect = 4e-10
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVSTLQDKAF 325
+YVVWNGR GIY SWN C KQ+ GF+ A +K F SLD+A AF K + K+
Sbjct: 6 FYVVWNGRKKGIYTSWNVCKKQIDGFEGAQYKSFASLDEAEIAFSKKYEDYKGKNTTKSI 65
Query: 324 EDSSSER---CPNCELLSL 277
+S + PN E +S+
Sbjct: 66 LSTSEKAKYGAPNLESISV 84
>ref|WP_027847416.1| ribonuclease H [Marinococcus halotolerans]
Length = 196
Score = 67.8 bits (164), Expect = 4e-10
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPV----STLQ 337
+YVVW G+ PGIY +W EC KQV GFK A FK F S ++A AF N P S +
Sbjct: 6 WYVVWKGKKPGIYSTWAECEKQVKGFKGARFKSFSSYEEAETAFNNSAAKPEAENGSYIT 65
Query: 336 DKAFEDSSSERCPN-CELLSLRIKVLEAHLAYYSEKNATPSPSKEQSVPHILAELSE 169
+ D+ S P E + K E A+ K T + ++ + H L L +
Sbjct: 66 ESISVDAGSHGNPGPVEYRGVYTKTEEIVFAHPGFKKGTNNIAEFLGIVHALRYLKD 122
>ref|WP_079737713.1| ribonuclease H [Polaribacter sp. KT 15]
emb|SHM91099.1| ribonuclease HI [Polaribacter sp. KT 15]
Length = 211
Score = 67.8 bits (164), Expect = 5e-10
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVSTLQDK-- 331
+YVVWNGR GIY SWN C KQ+ GF+ A +K F SLDDA AF + K
Sbjct: 6 FYVVWNGRKKGIYKSWNVCKKQIDGFEGAQYKSFASLDDAEVAFSKNFTDYIGKNTKKPT 65
Query: 330 -AFEDSSSERCPNCELLSL 277
+ D + PN E +S+
Sbjct: 66 LSIADKTKYGKPNLESISV 84
>gb|EAQ51717.1| hypothetical ribonuclease HI [Vibrio sp. MED222]
Length = 118
Score = 65.5 bits (158), Expect = 5e-10
Identities = 32/99 (32%), Positives = 48/99 (48%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVSTLQDKAF 325
YYVVW GR PGI+ +WNEC QV GF A +K F +L +A +AF K + K
Sbjct: 5 YYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLGEAESAFGGKTSSASGSTATKPS 64
Query: 324 EDSSSERCPNCELLSLRIKVLEAHLAYYSEKNATPSPSK 208
S + L +I + + +++ P+P +
Sbjct: 65 SAGKSTKAKVPPLSEQQITDMHFDIKIFTDGACEPNPGE 103
>ref|WP_090399368.1| ribonuclease H [Natribacillus halophilus]
emb|SDJ11412.1| ribonuclease HI [Natribacillus halophilus]
Length = 198
Score = 67.0 bits (162), Expect = 7e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQNKDDHPVSTLQDKAF 325
YYVVW+GR PGIY +W EC KQV GFK A FK F S +A A++++ S+ +++ +
Sbjct: 6 YYVVWHGRTPGIYQTWAECQKQVNGFKGARFKSFTSRQEAERAYESEHTDGESSHKEQTY 65
Query: 324 EDSS 313
+ S
Sbjct: 66 IEES 69
>ref|WP_026703344.1| ribonuclease H [Bacillus aidingensis]
Length = 201
Score = 67.0 bits (162), Expect = 8e-10
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -3
Query: 504 YYVVWNGRNPGIYDSWNECSKQVFGFKNASFKGFHSLDDANAAFQN 367
YYVVW GR PGIY+SW EC KQV G+ ASFK F S ++A AF++
Sbjct: 7 YYVVWKGRRPGIYESWAECEKQVKGYAGASFKSFKSKEEARQAFES 52