BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00019669
         (1828 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   835   0.0  
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   638   0.0  
gb|PNX92571.1| histone deacetylase [Trifolium pratense]               640   0.0  
dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subte...   607   0.0  
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   568   0.0  
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo...   529   e-173
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo...   438   e-143
gb|PKU81996.1| Retrovirus-related Pol polyprotein from transposo...   446   e-140
gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo...   405   e-130
ref|XP_014632953.1| PREDICTED: uncharacterized protein LOC102666...   394   e-126
dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subt...   382   e-118
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]      384   e-115
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   380   e-114
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   380   e-114
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...   364   e-114
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   378   e-114
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...   364   e-114
gb|KYP40244.1| Retrovirus-related Pol polyprotein from transposo...   359   e-111
dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subte...   372   e-111
gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposo...   342   e-110

>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  835 bits (2158), Expect = 0.0
 Identities = 409/613 (66%), Positives = 471/613 (76%), Gaps = 4/613 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GH +LDTMN VL+ CNM TF  N   FC+SCCLGKSHRLPSQLSQ+ Y+ PL+L+YCDLW
Sbjct: 519  GHTNLDTMNNVLKSCNMPTFNKNKTDFCISCCLGKSHRLPSQLSQSTYNSPLELIYCDLW 578

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GPAPM SSMG+KYYISFIDA S+Y W+YFLHDKSETLT+FKQFKALAELQLN K+K++QS
Sbjct: 579  GPAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAELQLNTKIKAIQS 638

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFR FT +L+ LGIIHR+ICP THHQNGVVERKHRHIVE GLSLLSHSSLPY YWD
Sbjct: 639  DWGGEFRSFTSYLSQLGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSHSSLPYHYWD 698

Query: 1288 HAFHTAVYLINRLPAAHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRSS 1109
            HAFHTAVY+INRLPA+H+H IPL+ L +  PD+ FL++FGCACYPLLTPYNNPKFQ+RS 
Sbjct: 699  HAFHTAVYIINRLPASHNHCIPLKVLFNNVPDYNFLRAFGCACYPLLTPYNNPKFQYRSK 758

Query: 1108 ECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSPTVTQYK 929
            EC FLGYS+   GYKCLD K+GRIYISKDV+FNE HFP+Q       P TC SP  T   
Sbjct: 759  ECIFLGYSTR--GYKCLDNKSGRIYISKDVLFNEKHFPYQI----TPPTTC-SPNQTVTS 811

Query: 928  TA----LNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTATPLHTPLPSDAX 761
             A    +N +                                    +A+P  T LPS A 
Sbjct: 812  AAPLGVVNHIPQQTPHTPNNLTPNNQPTPHTPTTFPSHTSSPYISASASPTPT-LPSTA- 869

Query: 760  XXXXXXXXXXXXXXXXXPQNNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHW 581
                               N H M TRSKTGHLKPPL+P+++LTTT+PTTVQQAL+S HW
Sbjct: 870  -SSTIDPNSTPTSSPSPTTNTHHMLTRSKTGHLKPPLFPTINLTTTEPTTVQQALSSIHW 928

Query: 580  AQAMQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQK 401
             +AMQQE+ AL AN TW+LVPLP  KRAIG KWIFRIK+N DG+IN+YKARLVAKG+ QK
Sbjct: 929  TEAMQQEYQALQANKTWSLVPLPPHKRAIGCKWIFRIKENPDGTINKYKARLVAKGFNQK 988

Query: 400  HGQDYNDTFSPVVKPVTIRIILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQ 221
            +GQDY+DT+SPVVKP+T+R +LT+ALT KW + QLDVNNAFL+G L EDVYMQQPQGFIQ
Sbjct: 989  YGQDYSDTYSPVVKPITVRTVLTIALTSKWPLIQLDVNNAFLNGQLHEDVYMQQPQGFIQ 1048

Query: 220  GDSSLVCHLKKAIYGLKQAPRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLMVLIY 41
            G+S+LVC L KAIYGLKQAPRAWY SLT TL SFGFQQSKCDPSLLI+N  GC L++LIY
Sbjct: 1049 GESTLVCKLHKAIYGLKQAPRAWYESLTNTLISFGFQQSKCDPSLLIFNKHGCCLLILIY 1108

Query: 40   VDDILITGSSLTA 2
            VDDI+ITGSS TA
Sbjct: 1109 VDDIIITGSSNTA 1121


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 839

 Score =  638 bits (1646), Expect = 0.0
 Identities = 314/609 (51%), Positives = 402/609 (66%), Gaps = 1/609 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHP  D +  V + CN      +   FC SCCLGKSH+LPSQLS+T+YH P +L+Y DLW
Sbjct: 157  GHPHNDVLKSVFKLCNFPNINKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFELIYSDLW 216

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GPAP+LS  G++YY++F+DA +R+TWI+ L  K+ TL VFKQF A+   Q    +K++Q+
Sbjct: 217  GPAPVLSDNGYQYYVTFVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQT 276

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFR FT +L   GI HR+ICP THHQNGVVERKHRHIVE GL+LL+ + LP  +WD
Sbjct: 277  DWGGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWD 336

Query: 1288 HAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
            +AF T+VYLINRLP++     +P + L H  PD+ FL+ FGC+C+P L PYN  K QFRS
Sbjct: 337  YAFLTSVYLINRLPSSSIQQDVPFRKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRS 396

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSPTVTQY 932
             EC FLGYS+SH GYKCL   +GR++ISKDVIF EN FP+    + + P+   S ++T  
Sbjct: 397  QECVFLGYSTSHKGYKCL-APSGRVFISKDVIFCENRFPYPTLFSPSTPSP-SSSSITVP 454

Query: 931  KTALNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTATPLHTPLPSDAXXXX 752
                N                                     +T+ P H   P       
Sbjct: 455  LVVTNPQAPITSTSHTSPSSPIFTDSSPSQPSHTSPTPNPSASTSLPTHVEAP------- 507

Query: 751  XXXXXXXXXXXXXXPQNNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQA 572
                          P N HPM TR+K G +KP L P+L LT  +P   +QAL S  W  A
Sbjct: 508  --------------PINLHPMTTRAKAGIVKPRLQPTLLLTHFEPKNTKQALASDTWLAA 553

Query: 571  MQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQ 392
            M+QE++AL AN TW LVPLP+ + AIG KW+FRIK+N DG+++++KARLVAKG+ Q+ G 
Sbjct: 554  MKQEYNALMANGTWTLVPLPSHRTAIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGF 613

Query: 391  DYNDTFSPVVKPVTIRIILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQGDS 212
            DY +TFSPVVKPVTIR+ILTLALT+ W+I+QLDVNNAFL+G+LEE+VYM QP GF   D 
Sbjct: 614  DYTETFSPVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLEEEVYMSQPPGFESSDK 673

Query: 211  SLVCHLKKAIYGLKQAPRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLMVLIYVDD 32
            SLVC L KAIYGLKQAPRAW+  L  TL    FQ SKCDPSL +Y++    + +L+YVDD
Sbjct: 674  SLVCKLHKAIYGLKQAPRAWFDKLKATLFHLNFQISKCDPSLFVYSHANNVIYILVYVDD 733

Query: 31   ILITGSSLT 5
            I+ITG++ T
Sbjct: 734  IIITGNNTT 742


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  640 bits (1652), Expect = 0.0
 Identities = 317/616 (51%), Positives = 414/616 (67%), Gaps = 8/616 (1%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHPS ++   V+QHCN +    ++  FC +CC+GK+HRL S LS T Y  PL+LVYCDLW
Sbjct: 572  GHPSHNSFKLVMQHCNFTVNNKDSSQFCAACCMGKAHRLHSPLSHTTYSAPLELVYCDLW 631

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GP+P  S  G+ YYISF+DA S++TWIY L  KS+ L +FKQFK++ ELQ    LK++Q+
Sbjct: 632  GPSPSPSKQGYHYYISFVDAYSKFTWIYLLKSKSDALLIFKQFKSMVELQFGHPLKALQT 691

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFRPFTKFLT+LG++HR+ICP THHQNGVVERKHRHIV+ GL+LLS ++LP  +WD
Sbjct: 692  DWGGEFRPFTKFLTELGVVHRLICPHTHHQNGVVERKHRHIVDLGLTLLSQATLPITFWD 751

Query: 1288 HAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
            +AF TAVYLINRLP++  + + P   L  ++PD+ FLK FGCAC+PLL PY+N K +FRS
Sbjct: 752  YAFPTAVYLINRLPSSSINFQTPYFLLFKQHPDYHFLKVFGCACFPLLRPYHNHKLEFRS 811

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSPTVTQY 932
             EC FLGYS SH GY+CL   +GR+Y+SKDV+FNE+ FP++ ++   +  +  SP    +
Sbjct: 812  QECLFLGYSPSHKGYRCLS-PSGRLYVSKDVLFNESRFPYK-ELFPISSGSSHSPPSKSF 869

Query: 931  KTALNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAT------PLHTPLPS 770
            K                                          +AT      PL TP PS
Sbjct: 870  KLPPLPTFPSITTDITSPLPPTAPHISSPPTPINDPSPPNSPLSATASDQSSPLSTPSPS 929

Query: 769  DAXXXXXXXXXXXXXXXXXXPQ-NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALT 593
             A                     N H MQTR+K+G  +P L     +  ++P +V+QAL 
Sbjct: 930  TASSTSHHVSIPPRAVPVPIIPVNAHNMQTRAKSGFKQPKLL----VAHSEPKSVKQALL 985

Query: 592  SPHWAQAMQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKG 413
             P W  AMQ E+DAL  N+TW LVPLP  ++AIG KW+FRIK+N DG++N+YKARLVAKG
Sbjct: 986  DPSWHAAMQTEYDALLNNNTWTLVPLPPDRQAIGCKWVFRIKENPDGTVNKYKARLVAKG 1045

Query: 412  YLQKHGQDYNDTFSPVVKPVTIRIILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQ 233
            + Q+ G D+ +TFSPVVKPVTIR+ILT+A+T  W+I+QLDVNNAFL+G L+E+VYM QPQ
Sbjct: 1046 FHQRQGFDFLETFSPVVKPVTIRVILTIAITKGWSIQQLDVNNAFLNGVLDEEVYMLQPQ 1105

Query: 232  GFIQGDSSLVCHLKKAIYGLKQAPRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLM 53
            GF   DSSLVC L KA+YGLKQAPR W+  L  TL   GF+ SKCDPSL +Y++    + 
Sbjct: 1106 GFESSDSSLVCKLHKALYGLKQAPRQWFERLQSTLLLLGFKSSKCDPSLFVYSSATDTIY 1165

Query: 52   VLIYVDDILITGSSLT 5
            +L+YVDDI+IT ++ T
Sbjct: 1166 LLVYVDDIIITSNNTT 1181


>dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subterraneum]
          Length = 1496

 Score =  607 bits (1565), Expect = 0.0
 Identities = 312/628 (49%), Positives = 402/628 (64%), Gaps = 22/628 (3%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHP  D++   LQ CN+          C +CCLGKSHRL + LS T+Y +P +LV CDLW
Sbjct: 558  GHPHYDSLRLALQLCNIHMPSKPHTDVCSACCLGKSHRLHAPLSNTVYTKPFELVVCDLW 617

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GPAP+ SS GF Y+++ +DA SR+ W+Y L  KS+TLT F +FK + ELQ + K+K+VQ+
Sbjct: 618  GPAPIKSSSGFTYFLTCVDAFSRFVWVYPLKRKSDTLTKFIEFKNMVELQFDCKIKTVQT 677

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            D GGEFRPFTKFLT+LGI+HR+ CP THHQNG+VERKHRH+VETGL+LLS + LP  YWD
Sbjct: 678  DGGGEFRPFTKFLTNLGIVHRLTCPHTHHQNGLVERKHRHLVETGLTLLSQAQLPLKYWD 737

Query: 1288 HAFHTAVYLINRLPA--AHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFR 1115
            HAF TA +LINRLP     +H  P  TLLHK+PD+K LK FGCAC+P L PY++ K  +R
Sbjct: 738  HAFITAAFLINRLPTPILQNHS-PYFTLLHKHPDYKALKVFGCACFPFLRPYHSTKLAYR 796

Query: 1114 SSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSPTVTQ 935
            S EC FLGYS+ + GYKCL    G +Y+SKDV+FNE+ FP  Y +  +  +T +SP ++ 
Sbjct: 797  SKECIFLGYSAMYKGYKCLS-PDGHVYVSKDVLFNEHKFP--YPLLFSTTSTSKSPILS- 852

Query: 934  YKTALNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTATPLHTPLPSDAXXX 755
              T ++ +                                   + A+ LHTP P      
Sbjct: 853  -PTPMSQVPLHLPNQVLNPTPITTIPADQIYTPTPSVSSPHPSDHAS-LHTPAP--LFPT 908

Query: 754  XXXXXXXXXXXXXXXPQNNHPMQTRSKTGHLKPPLYPS--------------------LH 635
                             + H   + S T    PP  PS                    L 
Sbjct: 909  NSLSPDNTSPNIQVSNASQHIFSSPSSTESTIPPNIPSVKPSQTHHMITRSKSKQNPTLL 968

Query: 634  LTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNAD 455
            LT  +PTT +QA  SPHW +AMQ+E++AL  N+TW+LV  PA KR IG KW+FR+K+N+D
Sbjct: 969  LTHMEPTTAKQAFQSPHWVKAMQEEYNALLKNNTWSLVTPPAHKRPIGCKWVFRVKENSD 1028

Query: 454  GSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIRIILTLALTYKWAIRQLDVNNAFL 275
            G+IN+YKARLVAKG+ Q+ G D+ +TFSPVVKPVT+R +LT+A+T KW I+Q+DVNNAFL
Sbjct: 1029 GTINKYKARLVAKGFHQRAGSDFTETFSPVVKPVTVRTVLTIAITNKWPIKQIDVNNAFL 1088

Query: 274  HGHLEEDVYMQQPQGFIQGDSSLVCHLKKAIYGLKQAPRAWYGSLTKTLCSFGFQQSKCD 95
            +G+LEE+VYMQQP GF   D  LVC L KA+YGLKQAPRAW+  L   L  +GF  SKCD
Sbjct: 1089 NGNLEEEVYMQQPPGFESSDKGLVCKLHKALYGLKQAPRAWFDRLKTALLLYGFTASKCD 1148

Query: 94   PSLLIYNNRGCQLMVLIYVDDILITGSS 11
            PSL +       +MVL+YVDDI+ITGSS
Sbjct: 1149 PSLFMLKTSSVLMMVLVYVDDIIITGSS 1176


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  568 bits (1464), Expect = 0.0
 Identities = 293/626 (46%), Positives = 385/626 (61%), Gaps = 17/626 (2%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHPS  T+  VL  CN++       +FC SCCLGK HR P  LS T Y +PL+L++ DLW
Sbjct: 529  GHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLW 588

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GP  +LS+ G++YYI F+DA SR++WI+ L +KSE +  F  FK   ELQ + K+KS+Q+
Sbjct: 589  GPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQT 648

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFR F  +L + GI+HRV CP T  QNGV ERKHR IVE GL+LL  +SLP  +WD
Sbjct: 649  DWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWD 708

Query: 1288 HAFHTAVYLINRLPAA-HSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
             +F T VYL NRLP A   HK P++ L    PD+ FLK FGC+C+P L PYN  K Q+RS
Sbjct: 709  ESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRS 768

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKV-------TDANPNTCQ 953
             ECTFLGYS  H GYKC+    GR+YIS DVIFNE  FP+   +       +  +P+T  
Sbjct: 769  EECTFLGYSLKHKGYKCMS-SNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTVSPSTSH 827

Query: 952  -----SPTV---TQYKTALNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTA 797
                 SP V   T   T  + +                                     A
Sbjct: 828  LSPSASPPVLSPTMLPTPTSPISSARPISEMDNIVSTHPHAPNSADTTLTPAQVVSNPVA 887

Query: 796  TPLHTPLPSDAXXXXXXXXXXXXXXXXXXPQNNHPMQTRSKTGHLKPPLYPSLHLTTTDP 617
            TP+   + S A                    N HPM TR+K+G +KP ++ +      +P
Sbjct: 888  TPVQHVVSSIA-------DASVTRTIAKDADNTHPMITRAKSGIVKPKIFIA---AIREP 937

Query: 616  TTVQQALTSPHWAQAMQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNADGSINRY 437
            ++V  AL    W +AM  E+DAL  N+TW+LVPLPAG++AIG KW+++ K+N DG++ +Y
Sbjct: 938  SSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKY 997

Query: 436  KARLVAKGYLQKHGQDYNDTFSPVVKPVTIRIILTLALTYKWAIRQLDVNNAFLHGHLEE 257
            KARLVAKG+ Q+ G D+ +TFSPVVKP T+R++ T+AL+  WAI+QLDVNNAFL+G L+E
Sbjct: 998  KARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQE 1057

Query: 256  DVYMQQPQGFI-QGDSSLVCHLKKAIYGLKQAPRAWYGSLTKTLCSFGFQQSKCDPSLLI 80
            +V+MQQPQGFI + + +LVC L KA+YGLKQAPRAW+  L + L SFGF  +K D SL +
Sbjct: 1058 EVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFL 1117

Query: 79   YNNRGCQLMVLIYVDDILITGSSLTA 2
                     VL+YVDDIL+ GS   A
Sbjct: 1118 RFTPNHITYVLVYVDDILVIGSDTAA 1143


>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1064

 Score =  529 bits (1362), Expect = e-173
 Identities = 266/512 (51%), Positives = 336/512 (65%), Gaps = 2/512 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQN-NAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDL 1652
            GHP  +T+  VLQHC +    N +   FC +CC+GK+H+L S  S T Y  PL+LV+ DL
Sbjct: 563  GHPHSNTLKLVLQHCKIPFNSNKDVSTFCTACCMGKAHKLHSLPSHTQYTHPLELVFSDL 622

Query: 1651 WGPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQ 1472
            WGP+P  S++G+ YYI+F+DA SR+TWIY L  KS+   +FKQFKA+ ELQ    LK++Q
Sbjct: 623  WGPSPQPSTLGYNYYITFVDAYSRFTWIYLLKSKSDAFIIFKQFKAMVELQFGHSLKALQ 682

Query: 1471 SDWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYW 1292
            +DWGGEFRPFTKFL DLG+IHR+ICP THHQNGVVERKHRHIV+ GL+LLS +SLP  YW
Sbjct: 683  TDWGGEFRPFTKFLKDLGVIHRLICPHTHHQNGVVERKHRHIVDLGLTLLSQASLPLSYW 742

Query: 1291 DHAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFR 1115
            D+AF TAVYLINRLP+A    KIP   L H+ PD+KFLK FGCAC+PLL PYN  K  +R
Sbjct: 743  DYAFLTAVYLINRLPSAPLDFKIPYTLLFHQDPDYKFLKVFGCACFPLLRPYNTHKLDYR 802

Query: 1114 SSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSPTVTQ 935
            S EC FLGYS SH GY+CL    GR++ISKDVIFNE+ FPF    T  +       +V  
Sbjct: 803  SHECLFLGYSPSHKGYRCLS-PNGRLFISKDVIFNESRFPFIDLFTSPH-------SVVP 854

Query: 934  YKTALNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTATPLHTPLPSDAXXX 755
             K++   L                                    T+ P+ +  P      
Sbjct: 855  SKSSAVTLSPLVHHPSHSPSPTSSPSPSIPNSPPPSASSPVVSPTSPPVTS--PESLSPP 912

Query: 754  XXXXXXXXXXXXXXXPQNNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQ 575
                           P N HPM TR+K G  +P L P L LT  +P +V+QAL  P W  
Sbjct: 913  NAPPIPPKAKPVVHKPSNLHPMLTRAKDGFTQPRLEPRLLLTHIEPASVKQALQVPEWKT 972

Query: 574  AMQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHG 395
            AMQ E+DAL AN+TW LVPLP+ + +IG KW+FR+KQN+DG++N+YKARLVAKG+ Q+HG
Sbjct: 973  AMQAEYDALLANNTWTLVPLPSDRSSIGCKWVFRVKQNSDGTLNKYKARLVAKGFHQRHG 1032

Query: 394  QDYNDTFSPVVKPVTIRIILTLALTYKWAIRQ 299
             D+ +TFSPVVKPVTIR+ILTLA+T KW+++Q
Sbjct: 1033 IDFTETFSPVVKPVTIRLILTLAITQKWSLQQ 1064


>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 600

 Score =  438 bits (1126), Expect = e-143
 Identities = 226/489 (46%), Positives = 296/489 (60%), Gaps = 8/489 (1%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMST-FQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDL 1652
            GH + D + K L+ CN+     N    FC SCC+ KSHRLPSQ S ++Y +PL+LV+ D+
Sbjct: 136  GHQNNDAITKALKICNIHIPTVNKISDFCDSCCIAKSHRLPSQPSSSVYSKPLELVFLDV 195

Query: 1651 WGPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQ 1472
            WGPA + SS G+ Y+++ +DA +RY WIY LH KS+  + F  FK LAE Q    LKSVQ
Sbjct: 196  WGPASLESSWGYMYFLTCVDACTRYMWIYLLHRKSDVFSHFLNFKTLAEKQFQTLLKSVQ 255

Query: 1471 SDWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYW 1292
            +D GGEFRP T FL   GIIHR+ CP THHQNG+VER+H H+VE GL++L H+SLP  +W
Sbjct: 256  TDGGGEFRPLTSFLQQHGIIHRLTCPHTHHQNGIVERRHIHVVELGLAMLHHASLPLKFW 315

Query: 1291 DHAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFR 1115
            DH F TA YLINRLP++   H+ P   + HK PD++FLK FGC+C+PLL PYN  K Q R
Sbjct: 316  DHGFLTATYLINRLPSSSIGHQSPYHLIHHKEPDYQFLKIFGCSCFPLLRPYNQHKIQPR 375

Query: 1114 SSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSPTVTQ 935
            S EC FLGYS +H GYKCL  K+GRIYISKDV+FNE+ FP+Q      + ++  + +V+ 
Sbjct: 376  SEECLFLGYSPTHKGYKCLS-KSGRIYISKDVVFNESRFPYQDLFVSKSVSSTPATSVSN 434

Query: 934  YKTALNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTATPLHT-PLPSDAXX 758
              + ++                                     +    LH+ P P+D+  
Sbjct: 435  IPSLIH------------------------SPSQFNSPESSTHSDPDFLHSQPAPADSQL 470

Query: 757  XXXXXXXXXXXXXXXXPQNNHP-----MQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALT 593
                             +   P     M TRSK G ++P L P+L L+   P TV+ AL 
Sbjct: 471  SSFNSSPNISAASGSISETARPLNLHPMTTRSKNGIVQPRLNPTLLLSHVVPKTVKTALA 530

Query: 592  SPHWAQAMQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKG 413
             PHW  AMQ E  AL  NHTW L  LP G++ IG KW+FR+K+N DGSIN+YKARLVAKG
Sbjct: 531  DPHWLAAMQTEITALHNNHTWTLTTLPPGRKPIGCKWVFRVKENPDGSINKYKARLVAKG 590

Query: 412  YLQKHGQDY 386
            + Q+ G D+
Sbjct: 591  FHQQPGLDF 599


>gb|PKU81996.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1188

 Score =  446 bits (1147), Expect = e-140
 Identities = 257/627 (40%), Positives = 348/627 (55%), Gaps = 21/627 (3%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQ---HCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYC 1658
            GHPS  T++ +     H N+     N    C +C   K+H+LP   SQ     PL+L++ 
Sbjct: 290  GHPSQRTLHSISAANPHLNIKVLSQN----CHTCNKAKTHKLPFDSSQHRSTFPLELLHS 345

Query: 1657 DLWGPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKS 1478
            D+WGPAP++S+ GF YY+ F D  +R+TW++ L  KSE  TVFK FK   E   + K+KS
Sbjct: 346  DVWGPAPIVSNSGFLYYVLFTDDYTRFTWLFPLKHKSEVTTVFKSFKIFVENSFSCKIKS 405

Query: 1477 VQSDWGGEF--RPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLP 1304
            +++D GGE+    FT  L   G  H++ CP T  QNGV ERKHRH++ET  +LL  +S+ 
Sbjct: 406  LRTDGGGEYLNTAFTILLQQAGRSHQISCPYTPEQNGVAERKHRHLLETTRALLYTASIS 465

Query: 1303 YFYWDHAFHTAVYLINRLPAAHS-HKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPK 1127
              YW  A  TA YL+NR+P+ ++ +K P + L  + P +  L++FGCAC+PL       K
Sbjct: 466  NSYWPDAILTANYLVNRMPSPNTDNKSPYELLFQQKPSYDHLRTFGCACFPLTPSQLRNK 525

Query: 1126 FQFRSSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQ-------YKVTDAN 968
            FQ +S  C FLGYS  + GYKCLD    +I +S+ VIF+EN FPF         + +D  
Sbjct: 526  FQPKSKLCVFLGYSEKYKGYKCLDISNNKILLSRHVIFDENSFPFLATQQGSIQEPSDTL 585

Query: 967  PNTCQSPT-VTQYKTALNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTATP 791
            P    +PT V Q + A N+                                       TP
Sbjct: 586  PFQFLTPTSVVQKQNASNI-----------------------------THPEGLRLQPTP 616

Query: 790  LHTPLPSDAXXXXXXXXXXXXXXXXXXPQNNHPMQTRSKTGHLKPPLYPS-LHLTTTD-- 620
            + T LP                        NH M TRSKTG LKP    + LH ++++  
Sbjct: 617  MQTTLPMPTSTEDVSSRQLSVSAPSHIKSTNHQMITRSKTGSLKPVTRLNLLHDSSSNSI 676

Query: 619  ---PTTVQQALTSPHWAQAMQQEFDALTANHTWNLVPLPAGKRAIGSKWIFRIKQNADGS 449
               P++  +A     W +AM  EF AL    TW+LVP P+    +G KW +R K +ADGS
Sbjct: 677  PITPSSYTEASKHAEWRKAMADEFLALQIQGTWSLVPRPSNSSILGCKWTYRTKFHADGS 736

Query: 448  INRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIRIILTLALTYKWAIRQLDVNNAFLHG 269
            ++++KARLVA G  Q+ G DY +TFSPV K  TIRI+L +AL   W ++Q+DV+NAFLHG
Sbjct: 737  LDKHKARLVALGNHQEFGLDYTETFSPVAKLPTIRILLAIALQNNWPVKQMDVSNAFLHG 796

Query: 268  HLEEDVYMQQPQGFIQ-GDSSLVCHLKKAIYGLKQAPRAWYGSLTKTLCSFGFQQSKCDP 92
             L E VYM QPQGF    +   VC L KAIYGLKQAPR WY + T  L S GF  SK DP
Sbjct: 797  SLSETVYMSQPQGFEDTTNPDYVCLLNKAIYGLKQAPRLWYNTFTSFLVSIGFTHSKSDP 856

Query: 91   SLLIYNNRGCQLMVLIYVDDILITGSS 11
            SLL+ +     + +L+YVDDILITG++
Sbjct: 857  SLLMLHKDKITVYLLVYVDDILITGNN 883


>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 623

 Score =  405 bits (1041), Expect = e-130
 Identities = 184/284 (64%), Positives = 220/284 (77%), Gaps = 1/284 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHP    +  VL+ C +     N   FCV+CC+GKSHRLPS  S T+Y  PL+L++CDLW
Sbjct: 110  GHPCFSVLQNVLKFCKIPVSNKNEVQFCVACCMGKSHRLPSSSSTTVYSTPLELLFCDLW 169

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GP PMLSSMG+ YY+SF+DA SR+TWIYFL +KSE LT+FKQF+A+A+LQ N K+KS QS
Sbjct: 170  GPTPMLSSMGYHYYMSFVDAYSRFTWIYFLKNKSEALTIFKQFQAMAKLQFNHKIKSFQS 229

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFRPFT+ LT LGI HR+ICP THHQNGVVERKHRHI+E GL+LLS + LP  YWD
Sbjct: 230  DWGGEFRPFTQILTSLGITHRLICPHTHHQNGVVERKHRHIIEMGLTLLSQAFLPMKYWD 289

Query: 1288 HAFHTAVYLINRLPA-AHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
            H FHT VYLINRLP+ +H+  +P Q L  K  D+ F+K FGCACYPLLTPYN  K  FRS
Sbjct: 290  HVFHTTVYLINRLPSLSHNKIVPYQVLYSKDLDYTFIKVFGCACYPLLTPYNTNKLHFRS 349

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKV 980
            +EC FLGYSSSH GYKCLD   G ++ISKDVIFNE  FP+Q+ +
Sbjct: 350  TECVFLGYSSSHKGYKCLD-TNGLLFISKDVIFNEQRFPYQHLI 392



 Score =  246 bits (628), Expect = 2e-69
 Identities = 113/178 (63%), Positives = 143/178 (80%)
 Frame = -1

Query: 703 NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
           N HPMQTRSK+G ++P L+P+L LTTT+PT+++QAL+SP W   M  E+DAL  N TW L
Sbjct: 441 NVHPMQTRSKSGIVRPKLHPTLLLTTTEPTSLKQALSSPSWKTVMSLEYDALIKNQTWKL 500

Query: 523 VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
           VPLP+ +  IG KW++ IK+N DG+IN+YKARLVAKG+ QK G DY++TFSPV+KP+TIR
Sbjct: 501 VPLPSNRTLIGCKWVYCIKENHDGTINKYKARLVAKGFHQKFGSDYSETFSPVIKPITIR 560

Query: 343 IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQGDSSLVCHLKKAIYGLK 170
           +ILTL +TY W I+Q+D+NNAFL+G LEEDVYM QP GF   D +LVC L KAIYGLK
Sbjct: 561 VILTLVVTYHWPIKQVDINNAFLNGFLEEDVYMMQPPGFEVSDKTLVCKLNKAIYGLK 618


>ref|XP_014632953.1| PREDICTED: uncharacterized protein LOC102666325 [Glycine max]
          Length = 608

 Score =  394 bits (1011), Expect = e-126
 Identities = 180/237 (75%), Positives = 204/237 (86%)
 Frame = -1

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            G APM SSMG+KYYISFIDA S+Y W+YFLHDKSETLT+FKQFKALAELQLN K+K++QS
Sbjct: 367  GQAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAELQLNTKIKAIQS 426

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFR FT +L+ LGIIHR+ICP THHQNGVVERKHRHIVE GLSLLSHSSLPY YWD
Sbjct: 427  DWGGEFRSFTSYLSQLGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSHSSLPYHYWD 486

Query: 1288 HAFHTAVYLINRLPAAHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRSS 1109
            HAFHTAVY+INRLPA+H+H IPL+ L +  PD+ FL++FGCACYPLLTPYNNPKFQ+RS 
Sbjct: 487  HAFHTAVYIINRLPASHNHCIPLKVLFNNVPDYNFLRAFGCACYPLLTPYNNPKFQYRSK 546

Query: 1108 ECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSPTVT 938
            EC F+GYS+SH GYKCLD K+GRIYISKDV+FNE HFP+Q       P TC SP  T
Sbjct: 547  ECIFMGYSTSHRGYKCLDNKSGRIYISKDVLFNEKHFPYQI----TPPTTC-SPNQT 598


>dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subterraneum]
          Length = 888

 Score =  382 bits (981), Expect = e-118
 Identities = 177/283 (62%), Positives = 217/283 (76%), Gaps = 3/283 (1%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQN--NAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCD 1655
            GHP+  T+   L+ CN+    N  +  +FC +CC+GK+HRL +  SQT Y +PL+LV+ D
Sbjct: 373  GHPNDQTLKSTLKQCNIPFINNKHDVSNFCTACCMGKAHRLYAPASQTTYTQPLELVFSD 432

Query: 1654 LWGPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSV 1475
            LWGP+P +SS+GF YYISFIDA SRYTWIY L  KS+  T+FKQFK +AELQL   LK++
Sbjct: 433  LWGPSPTVSSLGFHYYISFIDAYSRYTWIYLLKSKSDAFTIFKQFKTMAELQLGHSLKAL 492

Query: 1474 QSDWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFY 1295
            Q+DWGGEFRPFT +L + GIIHR+ICP THHQNGVVERKHRH+V+ GL+LLS ++LP  Y
Sbjct: 493  QTDWGGEFRPFTSYLANEGIIHRLICPHTHHQNGVVERKHRHVVDLGLTLLSQANLPLTY 552

Query: 1294 WDHAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQF 1118
            WDH+F TAV+LINRLP A  + KIP  TL HK PDF   K FG AC+PLL PYN+ KF F
Sbjct: 553  WDHSFLTAVHLINRLPTASLNFKIPYTTLFHKDPDFNSFKVFGAACFPLLRPYNSHKFDF 612

Query: 1117 RSSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQ 989
            RS EC FLGYS++H GYKCL   TGRIY+SKDVIFNE  FP++
Sbjct: 613  RSHECIFLGYSTTHKGYKCLS-PTGRIYVSKDVIFNEQRFPYK 654



 Score =  202 bits (513), Expect = 8e-52
 Identities = 94/150 (62%), Positives = 119/150 (79%)
 Frame = -1

Query: 703  NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
            NNHPM+TR+K+G   P   P+L LT T+P TV+QAL  P W  AM  EF+AL  NHTWNL
Sbjct: 726  NNHPMKTRAKSGISLPKPPPTLLLTHTEPRTVKQALQDPKWLSAMTTEFEALKNNHTWNL 785

Query: 523  VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
            VPLP  + AIG KW+FR K+N DG+IN+YKARLVAKG+ Q  G D+N+TFSPV+KP+TIR
Sbjct: 786  VPLPQNRTAIGCKWVFRTKENPDGTINKYKARLVAKGFHQIQGFDFNETFSPVIKPITIR 845

Query: 343  IILTLALTYKWAIRQLDVNNAFLHGHLEED 254
            +IL+LA++Y W ++QLDVNNAFL+G LEE+
Sbjct: 846  LILSLAVSYNWPLKQLDVNNAFLNGLLEEE 875


>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1489

 Score =  384 bits (985), Expect = e-115
 Identities = 183/294 (62%), Positives = 223/294 (75%), Gaps = 4/294 (1%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKH---FCVSCCLGKSHRLPSQLSQTIYHEPLDLVYC 1658
            GHP+  T+   L+ CN+S FQNN       C +CC+GK+HRL S  SQT+Y  PL+LV+ 
Sbjct: 578  GHPNNQTLKSALKLCNIS-FQNNDNDVSLLCTACCMGKAHRLHSPPSQTVYSHPLELVFS 636

Query: 1657 DLWGPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKS 1478
            DLWGPAP  SS+G+ YYI+FIDA S+YTWIY L  KSE LTVFKQFK +AELQL   LKS
Sbjct: 637  DLWGPAPSTSSLGYHYYITFIDAFSKYTWIYLLKSKSEALTVFKQFKTMAELQLGCSLKS 696

Query: 1477 VQSDWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYF 1298
            +Q+DWGGEFRPFTK L++LG+ HR+ICP THHQNGVVERKHRH+V+ GL+LLS ++LP  
Sbjct: 697  LQTDWGGEFRPFTKILSELGVSHRLICPHTHHQNGVVERKHRHVVDLGLTLLSQANLPIT 756

Query: 1297 YWDHAFHTAVYLINRLP-AAHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQ 1121
            YWDHAF TAV+LINRLP AA S KIP   L +K PD+  LK FGCAC+PLL PYN+ K  
Sbjct: 757  YWDHAFLTAVHLINRLPTAALSFKIPYTVLFNKIPDYHSLKVFGCACFPLLRPYNSHKLD 816

Query: 1120 FRSSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNT 959
            FRS EC F+GYS++H GYKCL   +G+I+ISKDV+FNE  FP+Q+       NT
Sbjct: 817  FRSHECIFMGYSNTHKGYKCLS-PSGKIFISKDVLFNEYRFPYQFLFPSPMKNT 869



 Score =  308 bits (790), Expect = 7e-88
 Identities = 149/232 (64%), Positives = 184/232 (79%), Gaps = 1/232 (0%)
 Frame = -1

Query: 703  NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
            N H MQTRSK+G + P   P+L LT T+P TV+QAL+ P W  AM+ EFDAL  N TW L
Sbjct: 952  NTHTMQTRSKSGIVLPKQNPTLLLTHTEPKTVKQALSIPQWYNAMKDEFDALQRNQTWTL 1011

Query: 523  VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
            V LP  + AIG KW+FR K+N DGSIN+YKARLVAKG+ QK G D+N+TFSPV+KPVTIR
Sbjct: 1012 VSLPPNRSAIGCKWVFRTKENPDGSINKYKARLVAKGFHQKPGFDFNETFSPVIKPVTIR 1071

Query: 343  IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQGDSSLVCHLKKAIYGLKQA 164
            +IL+LA++YKW ++QLD+NNAFL+G L E+VYM QPQGF + DSSLVC L KA+YGLKQA
Sbjct: 1072 LILSLAISYKWPLKQLDINNAFLNGSLNEEVYMVQPQGFEEKDSSLVCKLNKALYGLKQA 1131

Query: 163  PRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLM-VLIYVDDILITGSS 11
            PR W+  LT TL  FGF+ SKCDPSL IY ++ CQ++ +L+YVDDI+ITGSS
Sbjct: 1132 PRQWFDKLTSTLIQFGFKASKCDPSLFIY-SKNCQIVYLLVYVDDIIITGSS 1182


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  380 bits (976), Expect = e-114
 Identities = 184/301 (61%), Positives = 223/301 (74%), Gaps = 2/301 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHP+   +  VL  CN+ +   +   FC SCC+GKS RLPS  SQTIY  PLD+++ DLW
Sbjct: 369  GHPNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLW 428

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GP+ + S  G+ YY++FIDA S+YTWIY L  K+ETL+VF+QFKA+AELQ N K+KSVQS
Sbjct: 429  GPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQS 488

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGE+R FT FL   GI HRVICP THHQNGVVERKHRHIVE GL+LL H+SLP  +WD
Sbjct: 489  DWGGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWD 548

Query: 1288 HAFHTAVYLINRLP-AAHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
             AF TAVYLINRLP AA +  +P  TL +K PD+KFL++FGCAC+P L PY + K  FRS
Sbjct: 549  FAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRS 608

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDA-NPNTCQSPTVTQ 935
             EC FLGYS+SH GYKCL   +GRIYISKDVIFNE+ FP+    TD   P+  Q+ +  Q
Sbjct: 609  QECVFLGYSNSHKGYKCLS-SSGRIYISKDVIFNEHRFPY----TDLFQPSLTQNVSPCQ 663

Query: 934  Y 932
            Y
Sbjct: 664  Y 664



 Score =  311 bits (796), Expect = 3e-89
 Identities = 146/231 (63%), Positives = 182/231 (78%)
 Frame = -1

Query: 703  NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
            NNHPMQTRSK+G   P ++PSL L  ++P TV+QAL  P+W  AMQQE++AL  NHTW+L
Sbjct: 737  NNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDL 796

Query: 523  VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
            V LP+ ++A+G KW+FR+K+NADGSI++ KARLVAKG+ Q HG D+++TFSPV+KP+TIR
Sbjct: 797  VSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIR 856

Query: 343  IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQGDSSLVCHLKKAIYGLKQA 164
            IILTLALT  W + QLDVNNAFL+G LEE +YM QP GF  GD SLVC L KA+YGLKQA
Sbjct: 857  IILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKALYGLKQA 916

Query: 163  PRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLMVLIYVDDILITGSS 11
            PR W+  L  TL  FGFQ SKCDPSL  Y ++   + +L+YVDDI+ITGSS
Sbjct: 917  PRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSS 967


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  380 bits (976), Expect = e-114
 Identities = 184/301 (61%), Positives = 223/301 (74%), Gaps = 2/301 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHP+   +  VL  CN+ +   +   FC SCC+GKS RLPS  SQTIY  PLD+++ DLW
Sbjct: 448  GHPNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLW 507

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GP+ + S  G+ YY++FIDA S+YTWIY L  K+ETL+VF+QFKA+AELQ N K+KSVQS
Sbjct: 508  GPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQS 567

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGE+R FT FL   GI HRVICP THHQNGVVERKHRHIVE GL+LL H+SLP  +WD
Sbjct: 568  DWGGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWD 627

Query: 1288 HAFHTAVYLINRLP-AAHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
             AF TAVYLINRLP AA +  +P  TL +K PD+KFL++FGCAC+P L PY + K  FRS
Sbjct: 628  FAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRS 687

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDA-NPNTCQSPTVTQ 935
             EC FLGYS+SH GYKCL   +GRIYISKDVIFNE+ FP+    TD   P+  Q+ +  Q
Sbjct: 688  QECVFLGYSNSHKGYKCLS-SSGRIYISKDVIFNEHRFPY----TDLFQPSLTQNVSPCQ 742

Query: 934  Y 932
            Y
Sbjct: 743  Y 743



 Score =  311 bits (796), Expect = 6e-89
 Identities = 146/231 (63%), Positives = 182/231 (78%)
 Frame = -1

Query: 703  NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
            NNHPMQTRSK+G   P ++PSL L  ++P TV+QAL  P+W  AMQQE++AL  NHTW+L
Sbjct: 816  NNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDL 875

Query: 523  VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
            V LP+ ++A+G KW+FR+K+NADGSI++ KARLVAKG+ Q HG D+++TFSPV+KP+TIR
Sbjct: 876  VSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIR 935

Query: 343  IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQGDSSLVCHLKKAIYGLKQA 164
            IILTLALT  W + QLDVNNAFL+G LEE +YM QP GF  GD SLVC L KA+YGLKQA
Sbjct: 936  IILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKALYGLKQA 995

Query: 163  PRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLMVLIYVDDILITGSS 11
            PR W+  L  TL  FGFQ SKCDPSL  Y ++   + +L+YVDDI+ITGSS
Sbjct: 996  PRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSS 1046


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 661

 Score =  364 bits (934), Expect = e-114
 Identities = 164/295 (55%), Positives = 211/295 (71%), Gaps = 1/295 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GH   D +  V + CN      +   FC SCCLGKSH+LPSQLS+T+YH P +L+Y DLW
Sbjct: 122  GHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFELIYSDLW 181

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GPAP+LS  G++YY++ +DA +R+TWI+ L  K+ TL VFKQF A+ + Q    +K++Q+
Sbjct: 182  GPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQLPIKAIQT 241

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFR FT +L   GI HR+ICP THHQNGVVE KHRHIVE GL+LL+ + L   +WD
Sbjct: 242  DWGGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWD 301

Query: 1288 HAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
            +AF T+VYLINRLP++     +P Q L H+ PD+ FL+ FGC+C+P L PYN  K QFRS
Sbjct: 302  YAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRS 361

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSP 947
             EC FLGYS+SH GYKCL   +GRI+ISKDVIF ENHFP+      + P++  SP
Sbjct: 362  QECVFLGYSTSHKGYKCL-APSGRIFISKDVIFCENHFPYPSMFPPSTPSSSSSP 415



 Score =  195 bits (496), Expect = 2e-50
 Identities = 94/158 (59%), Positives = 121/158 (76%)
 Frame = -1

Query: 703 NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
           N HPM TR+K G  KP L P+L LT  +P + +QAL S  W  AM+Q++DAL AN TW L
Sbjct: 475 NLHPMTTRAKAGIAKPRLQPTLLLTHFEPKSTKQALASDTWLAAMKQKYDALMANGTWTL 534

Query: 523 VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
           V LP+ +  IG KW+FRIK+N DG+++++KARLVAKG+ Q+ G DY +TFS VVKPVTIR
Sbjct: 535 VSLPSHRTTIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGFDYTETFSLVVKPVTIR 594

Query: 343 IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQG 230
           +I TL LT+ W+I+QLDVNNAFL+G+LEE+ YM QP G
Sbjct: 595 LIHTLVLTHHWSIQQLDVNNAFLNGNLEEEFYMSQPPG 632


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score =  378 bits (970), Expect = e-114
 Identities = 172/279 (61%), Positives = 213/279 (76%), Gaps = 1/279 (0%)
 Frame = -1

Query: 1825 HPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLWG 1646
            HP+   +  VL HCN++    N   FC SCC+GKSHRLPS +S+++Y  PLDL++ DLWG
Sbjct: 426  HPNSHVLKLVLNHCNIAPSNRNVSEFCSSCCVGKSHRLPSLVSESVYSAPLDLIFTDLWG 485

Query: 1645 PAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQSD 1466
            P+ ++S  G+ YY+SFIDA S++TWIY L  KS+TL+VF+QFKA+ ELQLN K+KS+QSD
Sbjct: 486  PSHVVSHSGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSD 545

Query: 1465 WGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWDH 1286
            WGGE+R FT FL   GI HR+ICP THHQNGVVERKHRHIV+ G++LL H+SLP  +WD+
Sbjct: 546  WGGEYRSFTAFLATHGITHRLICPHTHHQNGVVERKHRHIVDIGITLLHHASLPLTFWDY 605

Query: 1285 AFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRSS 1109
            AF TAVYLINRLP A  +  IP   L  + PD+KFLK+FGCAC+P L PY   K  FRS 
Sbjct: 606  AFSTAVYLINRLPTASLNFDIPFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQ 665

Query: 1108 ECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPF 992
            EC FLGYS+SH GYKCL   +G+IYISKDVIFNE  FP+
Sbjct: 666  ECVFLGYSNSHKGYKCLS-ASGKIYISKDVIFNETRFPY 703



 Score =  308 bits (789), Expect = 3e-88
 Identities = 145/231 (62%), Positives = 182/231 (78%)
 Frame = -1

Query: 703  NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
            NNH MQTRSK+G  KP + PSL L  ++P  V+QAL+ P W  AM+QE+ AL  NHTW+L
Sbjct: 787  NNHSMQTRSKSGIYKPKMPPSLFLAHSEPKNVKQALSDPDWFSAMKQEYSALLQNHTWDL 846

Query: 523  VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
            VPLP+ ++A+G KW+FR+K+NADGSIN++KARLVAKG+ Q HG D+++TFSPV+KP+TIR
Sbjct: 847  VPLPSNRQAVGCKWVFRVKENADGSINKFKARLVAKGFHQVHGFDFHETFSPVIKPITIR 906

Query: 343  IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQGDSSLVCHLKKAIYGLKQA 164
            II+TLALTY W + QLDVNNAFL+G LEE VYM QP GF   D SLVC L KA+YG+KQA
Sbjct: 907  IIITLALTYNWHLFQLDVNNAFLNGILEETVYMVQPPGFEVEDKSLVCKLNKALYGVKQA 966

Query: 163  PRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLMVLIYVDDILITGSS 11
            PR W+  L  TL  FGFQ SKCDPSL +Y ++   + +L+YVDDI+ITGSS
Sbjct: 967  PRQWFDRLKFTLLQFGFQASKCDPSLFMYKHQDQIIFLLVYVDDIIITGSS 1017


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 682

 Score =  364 bits (934), Expect = e-114
 Identities = 164/295 (55%), Positives = 211/295 (71%), Gaps = 1/295 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GH   D +  V + CN      +   FC SCCLGKSH+LPSQLS+T+YH P +L+Y DLW
Sbjct: 143  GHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFELIYSDLW 202

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GPAP+LS  G++YY++ +DA +R+TWI+ L  K+ TL VFKQF A+ + Q    +K++Q+
Sbjct: 203  GPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQLPIKAIQT 262

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGGEFR FT +L   GI HR+ICP THHQNGVVE KHRHIVE GL+LL+ + L   +WD
Sbjct: 263  DWGGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWD 322

Query: 1288 HAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
            +AF T+VYLINRLP++     +P Q L H+ PD+ FL+ FGC+C+P L PYN  K QFRS
Sbjct: 323  YAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRS 382

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQYKVTDANPNTCQSP 947
             EC FLGYS+SH GYKCL   +GRI+ISKDVIF ENHFP+      + P++  SP
Sbjct: 383  QECVFLGYSTSHKGYKCL-APSGRIFISKDVIFCENHFPYPSMFPPSTPSSSSSP 436



 Score =  195 bits (496), Expect = 2e-50
 Identities = 94/158 (59%), Positives = 121/158 (76%)
 Frame = -1

Query: 703 NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
           N HPM TR+K G  KP L P+L LT  +P + +QAL S  W  AM+Q++DAL AN TW L
Sbjct: 496 NLHPMTTRAKAGIAKPRLQPTLLLTHFEPKSTKQALASDTWLAAMKQKYDALMANGTWTL 555

Query: 523 VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
           V LP+ +  IG KW+FRIK+N DG+++++KARLVAKG+ Q+ G DY +TFS VVKPVTIR
Sbjct: 556 VSLPSHRTTIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGFDYTETFSLVVKPVTIR 615

Query: 343 IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQG 230
           +I TL LT+ W+I+QLDVNNAFL+G+LEE+ YM QP G
Sbjct: 616 LIHTLVLTHHWSIQQLDVNNAFLNGNLEEEFYMSQPPG 653


>gb|KYP40244.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 720

 Score =  359 bits (921), Expect = e-111
 Identities = 168/280 (60%), Positives = 206/280 (73%), Gaps = 1/280 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            GHP+   +  VL  CN+         FC SC +GKSHRLPS  SQT+Y  PLDL++ DLW
Sbjct: 438  GHPNSHVLKLVLTQCNLLPSNTYVTEFCSSCYVGKSHRLPSSASQTVYSAPLDLIFTDLW 497

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GP+ + S  G+ YY++FIDA S+YTW+Y L  K+ETL+VF+QFKA+AELQ N K+KSVQS
Sbjct: 498  GPSHITSFSGYIYYVAFIDAFSKYTWVYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQS 557

Query: 1468 DWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYWD 1289
            DWGG ++ FT FL   GI HR+ICP THHQNGVVERKHRHIVE GL+LL H+SLP  +WD
Sbjct: 558  DWGGVYQAFTSFLATNGIEHRLICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLQFWD 617

Query: 1288 HAFHTAVYLINRLP-AAHSHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFRS 1112
              F TA+YLINR P AA +  +P   L +K PD+KFL++FGCAC+P L P  + K  FRS
Sbjct: 618  FTFTTAIYLINRFPSAALNFDVPFTVLFNKSPDYKFLRTFGCACFPFLRPCASHKLHFRS 677

Query: 1111 SECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPF 992
             EC FLGYS+SH GYKCL   + RIYISKDVIFNE+ FP+
Sbjct: 678  QECVFLGYSNSHKGYKCLS-SSSRIYISKDVIFNEHRFPY 716


>dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subterraneum]
          Length = 1409

 Score =  372 bits (955), Expect = e-111
 Identities = 174/284 (61%), Positives = 217/284 (76%), Gaps = 4/284 (1%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNN---AKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYC 1658
            GHP+  T+   L+ CN+  F NN     +FC +CC+GK+HRL S  S+T Y  PL+LV+ 
Sbjct: 523  GHPNDQTLKSTLKQCNIP-FTNNKSDVSNFCTTCCMGKAHRLHSSASKTTYTHPLELVFS 581

Query: 1657 DLWGPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKS 1478
            DL GP+P +SS+GF YYI+FIDA SRYTWIY L  KS+   +FKQFK +AELQL   LKS
Sbjct: 582  DLRGPSPSVSSLGFHYYITFIDAYSRYTWIYLLKSKSDAFPIFKQFKTMAELQLGHSLKS 641

Query: 1477 VQSDWGGEFRPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYF 1298
            +Q+DWGGEFRPFT +L +LGI+HR+ICP THHQNGVVERKHRH+V+ GL+LLS ++LP  
Sbjct: 642  LQTDWGGEFRPFTSYLDNLGIVHRLICPHTHHQNGVVERKHRHVVDLGLTLLSQANLPLT 701

Query: 1297 YWDHAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQ 1121
            YWDHAF TAV+LINRLP A  + K+P  TL  K PD+  LK FG AC+PL+ PYN+ KF 
Sbjct: 702  YWDHAFLTAVHLINRLPTASLNFKVPYTTLFQKDPDYNSLKVFGSACFPLIRPYNSHKFD 761

Query: 1120 FRSSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPFQ 989
            FRS EC FLGYS++H GYKCL   TGRIY+SKDV+FNE+ FP++
Sbjct: 762  FRSHECIFLGYSTTHKGYKCLS-PTGRIYVSKDVMFNESRFPYE 804



 Score =  293 bits (751), Expect = 1e-82
 Identities = 140/231 (60%), Positives = 172/231 (74%)
 Frame = -1

Query: 703  NNHPMQTRSKTGHLKPPLYPSLHLTTTDPTTVQQALTSPHWAQAMQQEFDALTANHTWNL 524
            N HPMQTR K+G + P + P L LT T+P T +QAL    W  AM +EF+AL  N TW L
Sbjct: 897  NTHPMQTRVKSGLILPKINPKLLLTHTEPRTTKQALQDRKWLSAMTEEFEALKRNKTWTL 956

Query: 523  VPLPAGKRAIGSKWIFRIKQNADGSINRYKARLVAKGYLQKHGQDYNDTFSPVVKPVTIR 344
            VPLP  +  IG KW+FR K+N DG+IN+YKARLVAKG+ Q  G D+N+TFSPV+KP+TIR
Sbjct: 957  VPLPNNRDVIGCKWVFRTKENPDGTINKYKARLVAKGFHQVQGFDFNETFSPVIKPITIR 1016

Query: 343  IILTLALTYKWAIRQLDVNNAFLHGHLEEDVYMQQPQGFIQGDSSLVCHLKKAIYGLKQA 164
            +IL+LA++YKW ++QLDVNNAFL+G LEE+VYM QP GF   D+SLVC L KA+YGLKQA
Sbjct: 1017 LILSLAVSYKWPLKQLDVNNAFLNGTLEEEVYMVQPPGFEVSDTSLVCKLNKALYGLKQA 1076

Query: 163  PRAWYGSLTKTLCSFGFQQSKCDPSLLIYNNRGCQLMVLIYVDDILITGSS 11
            PR W+  LT TL  FGFQ  KCDPSL  Y      + +L+YVDDI+ITGSS
Sbjct: 1077 PRQWFDRLTTTLLHFGFQAGKCDPSLFTYTKDRQVVYLLVYVDDIIITGSS 1127


>gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 302

 Score =  342 bits (878), Expect = e-110
 Identities = 165/281 (58%), Positives = 200/281 (71%), Gaps = 2/281 (0%)
 Frame = -1

Query: 1828 GHPSLDTMNKVLQHCNMSTFQNNAKHFCVSCCLGKSHRLPSQLSQTIYHEPLDLVYCDLW 1649
            G+P       V Q CN+         FC +C +GK+HRLPS LS  +Y  PL+LVY DLW
Sbjct: 17   GNPKFHVQKLVSQQCNIPVVNKIDGFFCNACYMGKAHRLPSNLSDLVYKNPLELVYSDLW 76

Query: 1648 GPAPMLSSMGFKYYISFIDAMSRYTWIYFLHDKSETLTVFKQFKALAELQLNKKLKSVQS 1469
            GPAP+ SS  +KYY+SF++A   +TWIY L +K +TLTVFKQFK + ELQ N  LKS+Q+
Sbjct: 77   GPAPIQSSNNYKYYLSFVNAYPCFTWIYLLQNKFDTLTVFKQFKMMVELQFNTSLKSLQT 136

Query: 1468 DWGGEF-RPFTKFLTDLGIIHRVICPQTHHQNGVVERKHRHIVETGLSLLSHSSLPYFYW 1292
            DWGGEF  P  K+L DLG+ HRVICP T HQNGV+ERKHRHIVE GL+ LSH+SLP  +W
Sbjct: 137  DWGGEFIIPLPKYLKDLGVNHRVICPHTPHQNGVIERKHRHIVELGLT-LSHASLPLKFW 195

Query: 1291 DHAFHTAVYLINRLPAAH-SHKIPLQTLLHKYPDFKFLKSFGCACYPLLTPYNNPKFQFR 1115
            D  F TAVYLINRLP A   + +P   L  + PD+ FLK+FGCAC+PLL PYN  K  FR
Sbjct: 196  DSTFCTAVYLINRLPTASLKYVVPYTILFKQSPDYTFLKTFGCACFPLLRPYNKHKLDFR 255

Query: 1114 SSECTFLGYSSSHLGYKCLDRKTGRIYISKDVIFNENHFPF 992
            S EC FLGYS+SH GYKCL    G+I+ISKDV+FNE  FP+
Sbjct: 256  SHECVFLGYSTSHKGYKCLS-PIGKIFISKDVVFNEYRFPY 295