BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00019541
         (751 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU25025.1| hypothetical protein TSUD_154990 [Trifolium subt...   360   e-117
gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]   363   e-112
gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   351   e-111
dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subt...   357   e-111
gb|KYP34558.1| Retrotransposable element Tf2 [Cajanus cajan]          345   e-109
gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   353   e-109
dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subt...   346   e-107
gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   346   e-106
dbj|GAU24592.1| hypothetical protein TSUD_289530 [Trifolium subt...   343   e-106
gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]   345   e-106
dbj|GAU39660.1| hypothetical protein TSUD_60270 [Trifolium subte...   338   e-105
gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]   342   e-105
gb|PNY17582.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   339   e-105
dbj|GAU12723.1| hypothetical protein TSUD_122150 [Trifolium subt...   340   e-104
gb|PNY17651.1| retrotransposon-related protein [Trifolium pratense]   340   e-104
dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subt...   332   e-102
gb|PNX93486.1| retrotransposon-related protein, partial [Trifoli...   327   e-100
gb|KYP41804.1| Retrotransposable element Tf2 [Cajanus cajan]          310   1e-99
ref|XP_009107707.1| PREDICTED: uncharacterized protein LOC103833...   296   8e-95
gb|KYP61609.1| Retrotransposable element Tf2, partial [Cajanus c...   309   2e-94

>dbj|GAU25025.1| hypothetical protein TSUD_154990 [Trifolium subterraneum]
          Length = 720

 Score =  360 bits (925), Expect = e-117
 Identities = 171/246 (69%), Positives = 199/246 (80%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DLLQ +K SWT D+ +Q +I +L+QD+  H+KF+WC   LRR+GKLVIG   +LK  IL 
Sbjct: 436  DLLQKIKTSWTQDTTLQNLIQELQQDAKSHSKFTWCRGELRRKGKLVIGSDPHLKQIILG 495

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLHDS +GGHSGRD TAARVKSLFYW+  +K        C VCQR KP+  A PGLLQPL
Sbjct: 496  WLHDSPSGGHSGRDVTAARVKSLFYWKGLNKYIQQYVRSCDVCQRCKPDLAAYPGLLQPL 555

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P+R+W+AISMDFIEGLP S  KQVIFVVVDRLSKYAHF ALSHP+TA DVA +F D V
Sbjct: 556  PIPNRVWDAISMDFIEGLPTSSKKQVIFVVVDRLSKYAHFMALSHPYTALDVAILFQDHV 615

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHG+P++ITSDRDPIFLS VW EFF LQG SLNKSTAYHPQSDGQTE+VNK LETYLR
Sbjct: 616  FKLHGMPSTITSDRDPIFLSKVWNEFFQLQGTSLNKSTAYHPQSDGQTEVVNKCLETYLR 675

Query: 27   CMCSEK 10
            CMC++K
Sbjct: 676  CMCADK 681


>gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score =  363 bits (931), Expect = e-112
 Identities = 175/249 (70%), Positives = 199/249 (79%)
 Frame = -2

Query: 750  PDLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFIL 571
            PDL + +K SWT D  +Q++I DL  + N H KFSW    LRR+GKLVIG   +LK+ IL
Sbjct: 1006 PDLYESIKASWTRDPSVQKLIADLVLNHNSHPKFSWVRNELRRRGKLVIGQDPHLKNSIL 1065

Query: 570  QWLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQP 391
            +WLHDS+ GGHSGRD TAARVKSLFYW+   K   I    C VCQRNK +  ASPGLLQP
Sbjct: 1066 RWLHDSSVGGHSGRDITAARVKSLFYWKGMAKDIQIYVRNCAVCQRNKADLSASPGLLQP 1125

Query: 390  LPVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDS 211
            LP+P +IW  ISMDFIEGLP S GKQVIFVVVDRLSKYAHF  LSHP+TA D+A++F+D+
Sbjct: 1126 LPIPSKIWVDISMDFIEGLPPSAGKQVIFVVVDRLSKYAHFIPLSHPYTAVDIAKVFLDN 1185

Query: 210  VYKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYL 31
            V+KLHGLP SITSDRDPIFLS  W EFF LQGV+LNKSTAYHPQSDGQTEIVNKA+ETYL
Sbjct: 1186 VFKLHGLPESITSDRDPIFLSTFWNEFFKLQGVALNKSTAYHPQSDGQTEIVNKAVETYL 1245

Query: 30   RCMCSEKAT 4
            RCMCSEK T
Sbjct: 1246 RCMCSEKPT 1254


>gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1005

 Score =  351 bits (901), Expect = e-111
 Identities = 163/248 (65%), Positives = 199/248 (80%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DL + +  +W  D+H++ II DLK+D   H+KFSW  + LRR+GKLVIG +  +K  IL 
Sbjct: 533  DLWESINLAWQQDTHLKAIIHDLKKDPKSHSKFSWIRDELRRRGKLVIGSNPTIKETILT 592

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLH SA GGHSGRD T +RVKSLFYW+  +K      + C +CQ+NKP+  ASPGLLQPL
Sbjct: 593  WLHSSAIGGHSGRDVTTSRVKSLFYWKGMNKDIITFVKNCAICQKNKPDLAASPGLLQPL 652

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P++IW  ISMDF+EGLP S GKQVIFVVVDRLSKYAHF ALSHP+TASDVA++F+D+V
Sbjct: 653  PIPNQIWTHISMDFVEGLPTSVGKQVIFVVVDRLSKYAHFMALSHPYTASDVAQLFLDNV 712

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHGLP SI SDRDPIF+S  W +FF LQGV+LNKS+AYHPQSDGQTE+VNK LETYLR
Sbjct: 713  FKLHGLPESIISDRDPIFISSFWNDFFKLQGVALNKSSAYHPQSDGQTEVVNKCLETYLR 772

Query: 27   CMCSEKAT 4
            CMCS++ T
Sbjct: 773  CMCSDRPT 780


>dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subterraneum]
          Length = 1417

 Score =  357 bits (916), Expect = e-111
 Identities = 171/249 (68%), Positives = 201/249 (80%)
 Frame = -2

Query: 750  PDLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFIL 571
            PDLL+ +K SW +D H+  II DL++D N H KFSW    LRR+GKLVIG  S +K+ I 
Sbjct: 1005 PDLLEAIKLSWPHDPHLNSIILDLQKDPNTHPKFSWLRGELRRKGKLVIGPDSGVKNSIF 1064

Query: 570  QWLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQP 391
            +WLH+S+ GGHSGRD TA+R+KSLFYW+   K      + C VCQR+KP+  ASPGLLQP
Sbjct: 1065 KWLHNSSLGGHSGRDITASRIKSLFYWKGMAKDIIGYVKNCGVCQRSKPDLAASPGLLQP 1124

Query: 390  LPVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDS 211
            L +P +IW  ISMDFIEGLP S GKQVIFVVVDRLSKYAHF AL+HP+TA D+A++F+D+
Sbjct: 1125 LSIPSQIWTDISMDFIEGLPPSFGKQVIFVVVDRLSKYAHFMALAHPYTALDIAQLFLDN 1184

Query: 210  VYKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYL 31
            V+KLHGLP SITSDRDPIFLS  WTEFF LQGV+LNKSTAYHPQSDGQTEIVNK LETYL
Sbjct: 1185 VFKLHGLPESITSDRDPIFLSTFWTEFFKLQGVALNKSTAYHPQSDGQTEIVNKCLETYL 1244

Query: 30   RCMCSEKAT 4
            RCMCS+K T
Sbjct: 1245 RCMCSDKPT 1253


>gb|KYP34558.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 875

 Score =  345 bits (884), Expect = e-109
 Identities = 165/245 (67%), Positives = 196/245 (80%)
 Frame = -2

Query: 744  LLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQW 565
            LL  +K  W +DS +QQII+DLKQ+ + H  F+W  E LRR+GKLVIG+   LK  IL+W
Sbjct: 403  LLDQIKAIWLSDSTLQQIISDLKQNPSSHPNFTWHREELRRKGKLVIGEDLALKDVILKW 462

Query: 564  LHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPLP 385
            LHDS  GGHSGRD TAARVKSLF+W+   K       +C +CQ+ KPE  A PGLLQPLP
Sbjct: 463  LHDSPLGGHSGRDVTAARVKSLFFWKGMLKDIQQYVRKCDICQKCKPELAAYPGLLQPLP 522

Query: 384  VPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSVY 205
            +P+RIW+AISMDFIEGLP S G+QVI VVVDRL KYAHF  LSHP+TA  VA++F+D+++
Sbjct: 523  IPNRIWDAISMDFIEGLPSSAGQQVILVVVDRLRKYAHFLPLSHPYTALKVAQVFLDNIF 582

Query: 204  KLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLRC 25
            KLHG+PTSITSDRDPIFLS VW++ F LQGV+LNKSTAYHPQ DGQTE+VNK LETYLRC
Sbjct: 583  KLHGMPTSITSDRDPIFLSKVWSDLFQLQGVALNKSTAYHPQFDGQTEVVNKCLETYLRC 642

Query: 24   MCSEK 10
            MCSEK
Sbjct: 643  MCSEK 647


>gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1476

 Score =  353 bits (906), Expect = e-109
 Identities = 165/246 (67%), Positives = 200/246 (81%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            +L + +K+SW+ D ++Q II+DL+ ++ PH+KFSW    LRR+GKLV+G    L  FIL+
Sbjct: 1002 NLFEMIKDSWSADPNLQVIISDLQTNTKPHSKFSWYRGELRRKGKLVVGSDPTLHRFILK 1061

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            W HDS  GGHSGRD TAAR+KSLF+W+   K        C VCQR KPEQ+ SPGLLQPL
Sbjct: 1062 WFHDSPAGGHSGRDVTAARIKSLFFWKGMTKDIQQYIRNCDVCQRCKPEQIPSPGLLQPL 1121

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P +IW+AIS+DFIEGLP S GKQVIFVVVDRLSKYAHF ALSHPFTA DVA++F+D+V
Sbjct: 1122 PIPDKIWDAISLDFIEGLPSSMGKQVIFVVVDRLSKYAHFMALSHPFTALDVAQLFLDNV 1181

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHGLP++ITSDRDPIFLS +W + F LQGV LNKSTAYHPQ+DGQTEIVNK LETYLR
Sbjct: 1182 FKLHGLPSTITSDRDPIFLSKLWNDLFQLQGVYLNKSTAYHPQTDGQTEIVNKCLETYLR 1241

Query: 27   CMCSEK 10
            CMC++K
Sbjct: 1242 CMCADK 1247


>dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subterraneum]
          Length = 1224

 Score =  346 bits (888), Expect = e-107
 Identities = 165/246 (67%), Positives = 195/246 (79%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DLL+ +K SW+ND  +   I +L+ D+  H KF+WC   LRR+GKLVIG    LK  IL 
Sbjct: 748  DLLERIKESWSNDVVLHNSIQELQADAKSHPKFTWCRGELRRKGKLVIGADPTLKQIILN 807

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLHDS +GGHSGRD TAARVKSLF+W+  +K        C VCQR KP+  ASPGLLQPL
Sbjct: 808  WLHDSPSGGHSGRDVTAARVKSLFFWKGVNKDIQHYVRNCDVCQRCKPDLSASPGLLQPL 867

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P  +W+AISMDFIEGLP S  KQVIFVVVDRLSKYAHF AL+HP+TA DVA+ F+D+V
Sbjct: 868  PIPKLVWDAISMDFIEGLPTSSKKQVIFVVVDRLSKYAHFMALAHPYTALDVAQQFLDNV 927

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHG+P++ITSDRDPIFLS VW E F LQGV+LNKSTAYHPQSDGQTE+VNK LETYLR
Sbjct: 928  FKLHGMPSTITSDRDPIFLSKVWNELFQLQGVALNKSTAYHPQSDGQTEVVNKCLETYLR 987

Query: 27   CMCSEK 10
            CMC++K
Sbjct: 988  CMCADK 993


>gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1478

 Score =  346 bits (888), Expect = e-106
 Identities = 167/248 (67%), Positives = 197/248 (79%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DLLQ ++ SW +DS +  II DL++D   H KFSW    LRR+GKLVIG + ++K  IL 
Sbjct: 1006 DLLQAIQLSWQSDSILNSIIQDLQKDPKIHPKFSWVRNELRRRGKLVIGANHDIKLSILS 1065

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLHDSA GGHSGRD T +R++SLFYW+   K        C +CQ++KP+  ASPGLLQPL
Sbjct: 1066 WLHDSAIGGHSGRDVTLSRIRSLFYWKGMAKDVLNYVRNCGICQKSKPDLAASPGLLQPL 1125

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P  IW  ISMDFIEGLP S GKQVIFVVVDRLSKYAHF AL+HP+TASDVA++F+D+V
Sbjct: 1126 PIPTLIWTDISMDFIEGLPKSGGKQVIFVVVDRLSKYAHFMALAHPYTASDVAQLFLDNV 1185

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHGLP SITSDRDPIF+S  W EFF LQGV+LNKS+AYHPQSDGQTEIVNK LETYLR
Sbjct: 1186 FKLHGLPESITSDRDPIFISTFWNEFFKLQGVALNKSSAYHPQSDGQTEIVNKCLETYLR 1245

Query: 27   CMCSEKAT 4
            CMCS+K T
Sbjct: 1246 CMCSDKPT 1253


>dbj|GAU24592.1| hypothetical protein TSUD_289530 [Trifolium subterraneum]
          Length = 1330

 Score =  343 bits (881), Expect = e-106
 Identities = 163/246 (66%), Positives = 195/246 (79%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            +LL+ + N W  D ++Q II DL++DS  H KFSW  + LRR GKLVIG ++ +K  IL 
Sbjct: 886  NLLESIINHWQQDPYLQTIIHDLQKDSKSHPKFSWTRDELRRNGKLVIGANTTIKDTILT 945

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLH S  GGHS RD TA+RVKSLFYW+   K      + C +CQ+NK +  A PGLLQPL
Sbjct: 946  WLHSSVVGGHSVRDVTASRVKSLFYWKGMTKDIFNFVKNCGICQKNKSDLAAYPGLLQPL 1005

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            PVPH+IW  ISMDF+EGLP S GKQVIFVVVDRLSKYAHF AL+HP+TA DVA++F+D+V
Sbjct: 1006 PVPHQIWTNISMDFVEGLPTSGGKQVIFVVVDRLSKYAHFMALAHPYTALDVAQVFLDNV 1065

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHGLP SITSDRDPIFLS  WTEFF LQGV+LNKS+AYHPQ+DGQTE+VNK LETYLR
Sbjct: 1066 FKLHGLPESITSDRDPIFLSSFWTEFFKLQGVALNKSSAYHPQTDGQTEVVNKCLETYLR 1125

Query: 27   CMCSEK 10
            CMCS++
Sbjct: 1126 CMCSDE 1131


>gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1472

 Score =  345 bits (884), Expect = e-106
 Identities = 168/250 (67%), Positives = 192/250 (76%)
 Frame = -2

Query: 750  PDLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFIL 571
            PDLL  +  SW  D H + II DL+ +   H KFSW    LRR+GKLVIG    +K  IL
Sbjct: 999  PDLLTSITASWQQDPHFKAIILDLQSNPQSHPKFSWTRGELRRRGKLVIGSDPAVKESIL 1058

Query: 570  QWLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQP 391
             WLHDSA GGHSGRD TA R+KSLFYW+   K      + C VCQRNKP+  A PGLLQP
Sbjct: 1059 HWLHDSALGGHSGRDVTATRIKSLFYWKGMTKDILHYVKNCGVCQRNKPDLAAYPGLLQP 1118

Query: 390  LPVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDS 211
            LP+P +IW AISMDFIEGLP S GKQVIFVVVDRLSKYAHF ALSHP+TA DVA++F+D+
Sbjct: 1119 LPIPTQIWTAISMDFIEGLPTSAGKQVIFVVVDRLSKYAHFMALSHPYTALDVAQLFLDN 1178

Query: 210  VYKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYL 31
            V+KLHG+P +ITSDRD IFLS  W EFF LQGV+L+KSTAYHPQSDGQTEIVNK LETYL
Sbjct: 1179 VFKLHGMPETITSDRDXIFLSTFWHEFFKLQGVALHKSTAYHPQSDGQTEIVNKCLETYL 1238

Query: 30   RCMCSEKATD 1
            RCMCS + T+
Sbjct: 1239 RCMCSSRPTN 1248


>dbj|GAU39660.1| hypothetical protein TSUD_60270 [Trifolium subterraneum]
          Length = 1128

 Score =  338 bits (868), Expect = e-105
 Identities = 161/248 (64%), Positives = 193/248 (77%)
 Frame = -2

Query: 750  PDLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFIL 571
            P+L   +K++W +D  + ++ ++L+Q+   + KF+W    LRR+GKLVIG    LK+ I 
Sbjct: 686  PNLFDTIKSAWQSDPFLSKLCSELQQNPTSNPKFTWIRNELRRKGKLVIGSDPTLKAAIF 745

Query: 570  QWLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQP 391
             WLHDSA GGHSGRD TAAR+KSLF+W+   K        C VCQRNK +  ASP L+QP
Sbjct: 746  HWLHDSALGGHSGRDLTAARIKSLFFWKGMAKEIQSYVRNCGVCQRNKSDLSASPDLIQP 805

Query: 390  LPVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDS 211
            LP+P +IW  ISMDFIEGLP S GKQVIFVVVDRLSKYAHF ALSHP+TA +VA+IF+D 
Sbjct: 806  LPIPDKIWTDISMDFIEGLPTSAGKQVIFVVVDRLSKYAHFMALSHPYTAENVAKIFLDH 865

Query: 210  VYKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYL 31
            V+KLHGLP SITSDRDPIFLS  W EFF LQGVSLNKSTAYHPQSDGQTEIVNK+LETYL
Sbjct: 866  VFKLHGLPDSITSDRDPIFLSKFWNEFFMLQGVSLNKSTAYHPQSDGQTEIVNKSLETYL 925

Query: 30   RCMCSEKA 7
            RCMC +++
Sbjct: 926  RCMCGDQS 933


>gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score =  342 bits (877), Expect = e-105
 Identities = 161/248 (64%), Positives = 196/248 (79%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DL + +  +W  D +++ II +++Q+S  H+KFSW  + LRR+GKLVIG    +K  IL 
Sbjct: 1006 DLWESINLAWQQDPYLKDIIHEVQQNSKSHSKFSWIRDELRRRGKLVIGSDPAIKETILT 1065

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLH SA GGHSGRD TA++VKSLFYW+  +K      + C +CQ+ KP+  ASPGLLQPL
Sbjct: 1066 WLHSSAVGGHSGRDVTASKVKSLFYWKGMNKDILNFVKNCAICQKQKPDLAASPGLLQPL 1125

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P  IW  ISMDFI+GLP S GKQVIFVVVDRLSKYAHF AL+HP+TA DVA++F+D+V
Sbjct: 1126 PIPSHIWAHISMDFIDGLPTSSGKQVIFVVVDRLSKYAHFMALAHPYTALDVAQLFLDNV 1185

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHGLP SITSDRDPIFLS+ W EFF LQGV+LNKS+AYHPQSDGQTEIVNK LETYLR
Sbjct: 1186 FKLHGLPESITSDRDPIFLSNFWNEFFKLQGVALNKSSAYHPQSDGQTEIVNKCLETYLR 1245

Query: 27   CMCSEKAT 4
            CMCS+  T
Sbjct: 1246 CMCSDHPT 1253


>gb|PNY17582.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1251

 Score =  339 bits (869), Expect = e-105
 Identities = 157/246 (63%), Positives = 197/246 (80%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DL+  ++NSW++D  + +I+TDL+ + + H KF+W    LRR+GKLV+G    LK+ IL 
Sbjct: 803  DLMTKIRNSWSSDPTLAKIVTDLQSNPSSHPKFTWIRNELRRKGKLVVGSDVALKNTILD 862

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLH S+ GGHSGRD+T+AR+KS+F+W+   K        C++CQ  K +Q ASPG LQPL
Sbjct: 863  WLHSSSAGGHSGRDSTSARIKSIFFWKGMMKDIQNFIRNCSICQTCKYDQAASPGSLQPL 922

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P  IW  ISMDFIEGLP S GKQVIFVVVDRLSKYAHF +L+HP+TA+DVA++F+D+V
Sbjct: 923  PIPSLIWVDISMDFIEGLPMSAGKQVIFVVVDRLSKYAHFMSLAHPYTAADVAQLFLDNV 982

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHG+P +ITSDRDPIFLS  W +FF+LQGV+LNKSTAYHPQSDGQTEIVNK LETYLR
Sbjct: 983  FKLHGMPNTITSDRDPIFLSQFWNDFFTLQGVALNKSTAYHPQSDGQTEIVNKGLETYLR 1042

Query: 27   CMCSEK 10
            CMCSEK
Sbjct: 1043 CMCSEK 1048


>dbj|GAU12723.1| hypothetical protein TSUD_122150 [Trifolium subterraneum]
          Length = 1492

 Score =  340 bits (873), Expect = e-104
 Identities = 156/247 (63%), Positives = 197/247 (79%)
 Frame = -2

Query: 750  PDLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFIL 571
            P L+  +K SW +D+ + +II +L  D + H+KFSW  E LRR+GKLV+G++  LK  I+
Sbjct: 1018 PSLMDQIKASWDSDATLTKIIDELTVDPSTHSKFSWAKEELRRKGKLVVGNNIELKQQIM 1077

Query: 570  QWLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQP 391
             W+H+SA GGHSGRDNTAAR+KSLF+W+   K        C +CQ  KP+  ASPGLLQP
Sbjct: 1078 HWMHNSAAGGHSGRDNTAARIKSLFFWKGLFKDVQQYIRNCKICQTCKPDLAASPGLLQP 1137

Query: 390  LPVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDS 211
            LP+P  +W  ISMDFI+GLP S GK VIFVVVDRLSKYAHF  L+HP++A DVA++F+D+
Sbjct: 1138 LPIPSLVWYDISMDFIDGLPASSGKHVIFVVVDRLSKYAHFIPLAHPYSALDVAQVFLDN 1197

Query: 210  VYKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYL 31
            ++KLHG+P SITSDRDPIFLS  WTEFF+LQGV+LNKSTAYHPQ+DGQT+I+NK+LETYL
Sbjct: 1198 IFKLHGMPNSITSDRDPIFLSQFWTEFFTLQGVALNKSTAYHPQTDGQTKIINKSLETYL 1257

Query: 30   RCMCSEK 10
            RCMC+EK
Sbjct: 1258 RCMCAEK 1264


>gb|PNY17651.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1478

 Score =  340 bits (871), Expect = e-104
 Identities = 159/247 (64%), Positives = 196/247 (79%)
 Frame = -2

Query: 750  PDLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFIL 571
            PDL+  +++SW+ D  + +I+TDLK +++ H KF+W    LRR+GKLVIG   +LK+ IL
Sbjct: 1005 PDLMTKIRDSWSKDPTLARIVTDLKSNTSSHPKFTWIRNELRRKGKLVIGADVSLKNTIL 1064

Query: 570  QWLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQP 391
             WLH SA GGHSGRD+T AR+KSLF+W+   K        C++CQ  K +Q  SPG LQP
Sbjct: 1065 GWLHSSAAGGHSGRDSTGARIKSLFFWKGMMKDIQNFIRNCSICQTCKYDQATSPGSLQP 1124

Query: 390  LPVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDS 211
            LP+P  IW  ISMDFIEGLP S GKQVIFVVVDRLSKYAHF +L+HP+TA+DVA++F+D+
Sbjct: 1125 LPIPSLIWVDISMDFIEGLPMSAGKQVIFVVVDRLSKYAHFMSLAHPYTAADVAQVFLDN 1184

Query: 210  VYKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYL 31
            V+KLHG+P +ITSDRDPIFLS  W + F+LQGV+LNKSTAYHPQSDGQTEIVNK LETYL
Sbjct: 1185 VFKLHGMPNTITSDRDPIFLSRFWNDLFTLQGVALNKSTAYHPQSDGQTEIVNKGLETYL 1244

Query: 30   RCMCSEK 10
            RCMCSEK
Sbjct: 1245 RCMCSEK 1251


>dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subterraneum]
          Length = 1326

 Score =  332 bits (852), Expect = e-102
 Identities = 159/249 (63%), Positives = 191/249 (76%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DLL  +K SW++D  + Q+I++L+   + H KFSW N  LRR+GKLVIG+ S+LK  I Q
Sbjct: 882  DLLHNIKQSWSSDPTLSQLISELQVKPSAHPKFSWINGELRRRGKLVIGNVSDLKDAIHQ 941

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLH+SA GGHSGRD T ARV+SLF+W+   K        C+ CQ  K +  ASPGLLQPL
Sbjct: 942  WLHNSAIGGHSGRDITTARVQSLFFWKGMRKDIQTFIRNCSTCQTCKSDYAASPGLLQPL 1001

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P +IWE ISMDFIEGLP S GKQ IFVV+DRL KYAHF  L HP+TA DVA+ F+D +
Sbjct: 1002 PIPSQIWEDISMDFIEGLPPSAGKQTIFVVIDRLGKYAHFIPLGHPYTALDVAQAFLDHI 1061

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHG+P++ITSDRDPIFLS  WTEFF LQG  LN+STAYHPQ+DGQTEIVNKALETYLR
Sbjct: 1062 FKLHGMPSTITSDRDPIFLSQFWTEFFKLQGTVLNRSTAYHPQTDGQTEIVNKALETYLR 1121

Query: 27   CMCSEKATD 1
            C+ SEK  D
Sbjct: 1122 CVSSEKPKD 1130


>gb|PNX93486.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1414

 Score =  327 bits (838), Expect = e-100
 Identities = 159/240 (66%), Positives = 185/240 (77%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            DL   +K  W +D  +QQ+I DL+Q+ N H KF+W    LRR+GKLVIG ++ L+  ILQ
Sbjct: 997  DLYDSIKACWYSDMVLQQLIQDLQQNPNSHPKFTWVRGELRRRGKLVIGHNTQLQESILQ 1056

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLHDSA GGHSGRD T ARVKSLF+W+   K      + C VCQRNK +  A PGLL PL
Sbjct: 1057 WLHDSAVGGHSGRDCTIARVKSLFFWKGMAKDIHNYIKNCVVCQRNKSDLSACPGLLHPL 1116

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P +IW  ISMDFIEGLP S GK VI VVVDRLSKYAHF  LSHP+TA D+A++F+D+V
Sbjct: 1117 PIPTKIWVDISMDFIEGLPPSTGKHVILVVVDRLSKYAHFIPLSHPYTAMDIAKVFLDNV 1176

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHGLP SIT+DRDPIFLS  W EFF LQGV LNKSTAYHPQSDGQTEIVNKA+ETYLR
Sbjct: 1177 FKLHGLPDSITNDRDPIFLSKFWNEFFKLQGVELNKSTAYHPQSDGQTEIVNKAVETYLR 1236


>gb|KYP41804.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 571

 Score =  310 bits (795), Expect = 1e-99
 Identities = 144/249 (57%), Positives = 185/249 (74%)
 Frame = -2

Query: 747 DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
           +LL  +K SW  D  +Q++I +++ D + H  FSW    LRR+G+LV+G+ S L+  IL 
Sbjct: 121 ELLDAIKTSWQVDDSLQKLIAEVQLDPSSHKAFSWTGGELRRKGRLVVGNDSELRRKILD 180

Query: 567 WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
           WLH SA+GGHSGRD T  R+KS+ YW+   K       +C  CQ+ K +  ASPGLLQPL
Sbjct: 181 WLHSSASGGHSGRDATYQRIKSVVYWKGLSKDVRRFIHQCPTCQQCKYDNSASPGLLQPL 240

Query: 387 PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
           P+P  IW+ I+MDFIEGLP S GKQVIFVVVDRLSK AHF AL HP+TAS+VA+ FMD++
Sbjct: 241 PIPDMIWQHITMDFIEGLPNSLGKQVIFVVVDRLSKAAHFMALKHPYTASEVAQCFMDNI 300

Query: 207 YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
           YKLHG P SITSDRDP+F+S+ W +F + QG+ +  STAYHPQ+DGQTE+VN+ LETYLR
Sbjct: 301 YKLHGCPASITSDRDPVFISNFWRDFMASQGIQVQLSTAYHPQTDGQTEVVNRCLETYLR 360

Query: 27  CMCSEKATD 1
           CMCS+  T+
Sbjct: 361 CMCSDDPTN 369


>ref|XP_009107707.1| PREDICTED: uncharacterized protein LOC103833373 [Brassica rapa]
          Length = 495

 Score =  296 bits (757), Expect = 8e-95
 Identities = 137/239 (57%), Positives = 177/239 (74%)
 Frame = -2

Query: 732 VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQWLHDS 553
           +K  W  D  +Q+II++L+   + H  +S+ N  LRR+GKLV+G+++++K  I +WLHDS
Sbjct: 252 LKILWDTDPTLQKIISELETKPSSHASYSFINGELRRRGKLVVGNNASVKLHIFKWLHDS 311

Query: 552 ATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPLPVPHR 373
           A GGHSGR++T  R+K+LFYW +           C+ CQRNK +Q A PGLLQPLPVP  
Sbjct: 312 AIGGHSGRNSTLHRIKTLFYWPKMSLEVQNYVRNCSTCQRNKYDQAAKPGLLQPLPVPAG 371

Query: 372 IWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSVYKLHG 193
           +WE+IS+ F+EGLP S GK  I VV+DRLSK AHF ALSHP+TA DVA+++++ V++LHG
Sbjct: 372 VWESISLVFVEGLPPSAGKHCILVVIDRLSKNAHFLALSHPYTALDVAKVYLNQVFRLHG 431

Query: 192 LPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLRCMCS 16
           +P  ITSDRDP FLS VW E F + GV LN STAYHPQSDGQTE+ NK LETYLRCM S
Sbjct: 432 MPKDITSDRDPTFLSEVWREMFRVHGVDLNYSTAYHPQSDGQTEVTNKTLETYLRCMTS 490


>gb|KYP61609.1| Retrotransposable element Tf2, partial [Cajanus cajan]
          Length = 1127

 Score =  309 bits (792), Expect = 2e-94
 Identities = 143/246 (58%), Positives = 186/246 (75%)
 Frame = -2

Query: 747  DLLQ*VKNSWTNDSHIQQIITDLKQDSNPHTKFSWCNETLRRQGKLVIGDSSNLKSFILQ 568
            +LL  +KN+W  D ++Q+II +L+ D+  H +FSW    LRR+GKLV+G    ++  IL 
Sbjct: 678  ELLNSIKNTWQTDVNLQRIIMELQADNASHKQFSWQRGELRRKGKLVVGKDQEVRRQILV 737

Query: 567  WLHDSATGGHSGRDNTAARVKSLFYWERNDKRDSILCEECTVCQRNKPEQVASPGLLQPL 388
            WLH SA GGHSGRD+T  RVKS+ YW+   K      ++C VCQR+K +  ASPGLLQPL
Sbjct: 738  WLHASACGGHSGRDSTLHRVKSVVYWKGMTKDVRRFVQQCQVCQRSKYDTTASPGLLQPL 797

Query: 387  PVPHRIWEAISMDFIEGLPGSHGKQVIFVVVDRLSKYAHFTALSHPFTASDVARIFMDSV 208
            P+P  +W+ I+MDFIEGLP S GKQVIFVVVDRLSK AHF AL HP+TA+ VA+ F+D+V
Sbjct: 798  PIPDHVWQHITMDFIEGLPNSFGKQVIFVVVDRLSKAAHFMALQHPYTAATVAQCFLDNV 857

Query: 207  YKLHGLPTSITSDRDPIFLSHVWTEFFSLQGVSLNKSTAYHPQSDGQTEIVNKALETYLR 28
            +KLHG PT+ITSDRD +F+S  W EF ++QGV +  STAYHPQ+DGQTE+VN+ +ETYLR
Sbjct: 858  FKLHGFPTTITSDRDSVFVSRFWKEFMAVQGVQIQLSTAYHPQTDGQTEVVNRCVETYLR 917

Query: 27   CMCSEK 10
            CMC ++
Sbjct: 918  CMCCDE 923