BLASTX nr result
ID: Astragalus23_contig00019426
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Astragalus23_contig00019426 (674 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_012570330.1| PREDICTED: RNA polymerase sigma factor sigF,... 59 2e-06 ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF,... 59 2e-06 ref|XP_003590454.2| RNA polymerase sigma factor [Medicago trunca... 58 3e-06 >ref|XP_012570330.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like isoform X2 [Cicer arietinum] Length = 543 Score = 58.9 bits (141), Expect = 2e-06 Identities = 28/34 (82%), Positives = 31/34 (91%) Frame = +3 Query: 573 EITADTAVESPDMTVAKQVMRRHVLNTLSILRPK 674 EITADTA+ES DM+VAKQ+MRRHVLNTL LRPK Sbjct: 449 EITADTAIESTDMSVAKQLMRRHVLNTLKTLRPK 482 >ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like isoform X1 [Cicer arietinum] Length = 576 Score = 58.9 bits (141), Expect = 2e-06 Identities = 28/34 (82%), Positives = 31/34 (91%) Frame = +3 Query: 573 EITADTAVESPDMTVAKQVMRRHVLNTLSILRPK 674 EITADTA+ES DM+VAKQ+MRRHVLNTL LRPK Sbjct: 482 EITADTAIESTDMSVAKQLMRRHVLNTLKTLRPK 515 >ref|XP_003590454.2| RNA polymerase sigma factor [Medicago truncatula] gb|AES60705.2| RNA polymerase sigma factor [Medicago truncatula] Length = 561 Score = 58.2 bits (139), Expect = 3e-06 Identities = 27/34 (79%), Positives = 32/34 (94%) Frame = +3 Query: 573 EITADTAVESPDMTVAKQVMRRHVLNTLSILRPK 674 EITAD A+ESP+M+VAKQ+MRRHVLN L+ILRPK Sbjct: 467 EITADCAIESPNMSVAKQLMRRHVLNVLNILRPK 500