BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00019260
         (1211 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo...   241   e-102
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   225   e-102
dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subt...   244   5e-99
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   233   1e-97
gb|PNX92571.1| histone deacetylase [Trifolium pratense]               241   3e-97
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo...   238   3e-96
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   227   7e-96
dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subte...   242   2e-95
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   236   1e-94
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   228   1e-94
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   227   1e-93
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   227   1e-93
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...   221   3e-93
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...   221   3e-93
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo...   224   4e-92
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   228   4e-92
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   228   4e-92
gb|KYP52268.1| Retrovirus-related Pol polyprotein from transposo...   218   1e-90
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]      228   4e-90
dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subte...   229   6e-90

>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 623

 Score =  241 bits (616), Expect(2) = e-102
 Identities = 106/184 (57%), Positives = 135/184 (73%)
 Frame = -1

Query: 740 GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
           GGEFRPF+Q L S+G+ HRLICPHTHHQNGV+ERKHRHI++MG            +WDH 
Sbjct: 232 GGEFRPFTQILTSLGITHRLICPHTHHQNGVVERKHRHIIEMGLTLLSQAFLPMKYWDHV 291

Query: 560 FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
           FH++VYLINRLPS   N  +PY  +Y K  D++F+KVFGC+C+PLL PY+  K  FR+ E
Sbjct: 292 FHTTVYLINRLPSLSHNKIVPYQVLYSKDLDYTFIKVFGCACYPLLTPYNTNKLHFRSTE 351

Query: 380 CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
           C+FLGYS++HKGYKCLD  G LF+SKDV+FNE  FPY +L P+T +   + + T  PLGV
Sbjct: 352 CVFLGYSSSHKGYKCLDTNGLLFISKDVIFNEQRFPYQHLIPSTTS--VSNSSTNFPLGV 409

Query: 200 VPFN 189
           +  N
Sbjct: 410 LSSN 413



 Score =  160 bits (405), Expect(2) = e-102
 Identities = 71/100 (71%), Positives = 81/100 (81%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLEL 941
            LWHNRLGHP   VL +VL  C  P+ NKN++ FCVACCMGK H+LPS  STTVYS PLEL
Sbjct: 104  LWHNRLGHPCFSVLQNVLKFCKIPVSNKNEVQFCVACCMGKSHRLPSSSSTTVYSTPLEL 163

Query: 940  IFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            +FCDLWGP PM+SSMGY YY+SFVDA+SR+T IYFLK  S
Sbjct: 164  LFCDLWGPTPMLSSMGYHYYMSFVDAYSRFTWIYFLKNKS 203


>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  225 bits (574), Expect(3) = e-102
 Identities = 102/182 (56%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFR F+ YL+ +G++HR+ICPHTHHQNGV+ERKHRHIV+MG            +WDH+
Sbjct: 641  GGEFRSFTSYLSQLGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSHSSLPYHYWDHA 700

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            FH++VY+INRLP+ H NH IP   ++   PD++FL+ FGC+C+PLL PY+N KFQ+R+ E
Sbjct: 701  FHTAVYIINRLPASH-NHCIPLKVLFNNVPDYNFLRAFGCACYPLLTPYNNPKFQYRSKE 759

Query: 380  CIFLGYSANHKGYKCLD-ATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLG 204
            CIFLGYS   +GYKCLD  +GR+++SKDV+FNE  FPY    PTT +    T  +  PLG
Sbjct: 760  CIFLGYST--RGYKCLDNKSGRIYISKDVLFNEKHFPYQITPPTTCSPN-QTVTSAAPLG 816

Query: 203  VV 198
            VV
Sbjct: 817  VV 818



 Score =  154 bits (389), Expect(3) = e-102
 Identities = 64/95 (67%), Positives = 78/95 (82%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGH N+  +N+VL  CN P  NKNK DFC++CC+GK H+LPSQ S + Y+ PLELI
Sbjct: 514  WHHRLGHTNLDTMNNVLKSCNMPTFNKNKTDFCISCCLGKSHRLPSQLSQSTYNSPLELI 573

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFL 833
            +CDLWGPAPM SSMGYKYYISF+DAFS+Y  +YFL
Sbjct: 574  YCDLWGPAPMQSSMGYKYYISFIDAFSKYIWVYFL 608



 Score = 43.1 bits (100), Expect(3) = e-102
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           L+IF QF+ L E Q N KIKA+QSDWGG
Sbjct: 615 LTIFKQFKALAELQLNTKIKAIQSDWGG 642


>dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subterraneum]
          Length = 888

 Score =  244 bits (624), Expect(3) = 5e-99
 Identities = 111/185 (60%), Positives = 136/185 (73%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFRPF+ YLA+ G++HRLICPHTHHQNGV+ERKHRH+VD+G           ++WDHS
Sbjct: 497  GGEFRPFTSYLANEGIIHRLICPHTHHQNGVVERKHRHVVDLGLTLLSQANLPLTYWDHS 556

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++V+LINRLP+   N  IPYTT++ K PDF+  KVFG +CFPLLRPY++ KF FR+ E
Sbjct: 557  FLTAVHLINRLPTASLNFKIPYTTLFHKDPDFNSFKVFGAACFPLLRPYNSHKFDFRSHE 616

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
            CIFLGYS  HKGYKCL  TGR++VSKDV+FNE  FPY  LFPT  T   +T     PL  
Sbjct: 617  CIFLGYSTTHKGYKCLSPTGRIYVSKDVIFNEQRFPYKILFPTQ-TSSLSTPIQDVPLST 675

Query: 200  VPFNT 186
            +P  T
Sbjct: 676  LPVGT 680



 Score =  132 bits (333), Expect(3) = 5e-99
 Identities = 64/103 (62%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKID---FCVACCMGKHHKLPSQPSTTVYSHP 950
            LWH RLGHPN   L S L  CN P IN NK D   FC ACCMGK H+L +  S T Y+ P
Sbjct: 367  LWHLRLGHPNDQTLKSTLKQCNIPFIN-NKHDVSNFCTACCMGKAHRLYAPASQTTYTQP 425

Query: 949  LELIFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            LEL+F DLWGP+P VSS+G+ YYISF+DA+SRYT IY LK  S
Sbjct: 426  LELVFSDLWGPSPTVSSLGFHYYISFIDAYSRYTWIYLLKSKS 468



 Score = 35.8 bits (81), Expect(3) = 5e-99
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -3

Query: 825 ALSIFTQFQKLVENQFNCKIKAVQSDWGGGRISPFQS 715
           A +IF QF+ + E Q    +KA+Q+DW GG   PF S
Sbjct: 470 AFTIFKQFKTMAELQLGHSLKALQTDW-GGEFRPFTS 505


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 785

 Score =  233 bits (594), Expect(3) = 1e-97
 Identities = 105/178 (58%), Positives = 129/178 (72%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFR F+ YLA  G+ HRLICPHTHHQNGV+ERKHRHIV++G            FWDH+
Sbjct: 532  GGEFRSFTSYLAQNGIQHRLICPHTHHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHA 591

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F +SVYLINRLPS    + +P+  ++ + PD++FL++FGCSCFP LRPY+  K QFR+ E
Sbjct: 592  FLTSVYLINRLPSSSIQNDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQE 651

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPL 207
            C+FLGYS +HKGYKCL  TGR+F+SKDVVF E  FPYP+LFP   T  P T     PL
Sbjct: 652  CVFLGYSTSHKGYKCLAPTGRIFISKDVVFCETRFPYPSLFPAPAT-NPLTPSIPVPL 708



 Score =  134 bits (337), Expect(3) = 1e-97
 Identities = 58/96 (60%), Positives = 71/96 (73%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGHP+  V+ SV  +CN PIINK   DFC  CC+GK HKLPS  S TVY  P ELI
Sbjct: 405  WHSRLGHPHNDVIKSVFRLCNFPIINKTASDFCTPCCLGKSHKLPSNSSKTVYHTPFELI 464

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLWGPAP+ S  GY+YY++FVDA +R+T I+ LK
Sbjct: 465  YSDLWGPAPITSDNGYQYYVTFVDAHTRFTWIFLLK 500



 Score = 41.2 bits (95), Expect(3) = 1e-97
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           L +F QF  +++NQF   IKA+Q+DWGG
Sbjct: 506 LDVFKQFHAMIQNQFQLPIKAIQTDWGG 533


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  241 bits (615), Expect(3) = 3e-97
 Identities = 108/185 (58%), Positives = 137/185 (74%), Gaps = 3/185 (1%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFRPF+++L  +GVVHRLICPHTHHQNGV+ERKHRHIVD+G           +FWD++
Sbjct: 694  GGEFRPFTKFLTELGVVHRLICPHTHHQNGVVERKHRHIVDLGLTLLSQATLPITFWDYA 753

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++VYLINRLPS   N   PY  ++++ PD+ FLKVFGC+CFPLLRPYHN K +FR+ E
Sbjct: 754  FPTAVYLINRLPSSSINFQTPYFLLFKQHPDYHFLKVFGCACFPLLRPYHNHKLEFRSQE 813

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQ---PATACTLQP 210
            C+FLGYS +HKGY+CL  +GRL+VSKDV+FNE+ FPY  LFP +       P+ +  L P
Sbjct: 814  CLFLGYSPSHKGYRCLSPSGRLYVSKDVLFNESRFPYKELFPISSGSSHSPPSKSFKLPP 873

Query: 209  LGVVP 195
            L   P
Sbjct: 874  LPTFP 878



 Score =  127 bits (319), Expect(3) = 3e-97
 Identities = 57/100 (57%), Positives = 69/100 (69%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLEL 941
            LWH RLGHP+ +    V+  CN  + NK+   FC ACCMGK H+L S  S T YS PLEL
Sbjct: 566  LWHQRLGHPSHNSFKLVMQHCNFTVNNKDSSQFCAACCMGKAHRLHSPLSHTTYSAPLEL 625

Query: 940  IFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            ++CDLWGP+P  S  GY YYISFVDA+S++T IY LK  S
Sbjct: 626  VYCDLWGPSPSPSKQGYHYYISFVDAYSKFTWIYLLKSKS 665



 Score = 38.9 bits (89), Expect(3) = 3e-97
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -3

Query: 825 ALSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           AL IF QF+ +VE QF   +KA+Q+DWGG
Sbjct: 667 ALLIFKQFKSMVELQFGHPLKALQTDWGG 695


>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1064

 Score =  238 bits (606), Expect(3) = 3e-96
 Identities = 106/192 (55%), Positives = 142/192 (73%), Gaps = 2/192 (1%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFRPF+++L  +GV+HRLICPHTHHQNGV+ERKHRHIVD+G           S+WD++
Sbjct: 686  GGEFRPFTKFLKDLGVIHRLICPHTHHQNGVVERKHRHIVDLGLTLLSQASLPLSYWDYA 745

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++VYLINRLPS   +  IPYT ++ + PD+ FLKVFGC+CFPLLRPY+  K  +R+ E
Sbjct: 746  FLTAVYLINRLPSAPLDFKIPYTLLFHQDPDYKFLKVFGCACFPLLRPYNTHKLDYRSHE 805

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLF--PTTLTKQPATACTLQPL 207
            C+FLGYS +HKGY+CL   GRLF+SKDV+FNE+ FP+ +LF  P ++    ++A TL PL
Sbjct: 806  CLFLGYSPSHKGYRCLSPNGRLFISKDVIFNESRFPFIDLFTSPHSVVPSKSSAVTLSPL 865

Query: 206  GVVPFNTAQPAT 171
               P ++  P +
Sbjct: 866  VHHPSHSPSPTS 877



 Score =  129 bits (323), Expect(3) = 3e-96
 Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPI-INKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLE 944
            +WH RLGHP+ + L  VL  C  P   NK+   FC ACCMGK HKL S PS T Y+HPLE
Sbjct: 557  MWHLRLGHPHSNTLKLVLQHCKIPFNSNKDVSTFCTACCMGKAHKLHSLPSHTQYTHPLE 616

Query: 943  LIFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            L+F DLWGP+P  S++GY YYI+FVDA+SR+T IY LK  S
Sbjct: 617  LVFSDLWGPSPQPSTLGYNYYITFVDAYSRFTWIYLLKSKS 657



 Score = 37.4 bits (85), Expect(3) = 3e-96
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -3

Query: 825 ALSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           A  IF QF+ +VE QF   +KA+Q+DWGG
Sbjct: 659 AFIIFKQFKAMVELQFGHSLKALQTDWGG 687


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  227 bits (578), Expect(3) = 7e-96
 Identities = 105/190 (55%), Positives = 133/190 (70%)
 Frame = -1

Query: 740 GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
           GGEFR F+ YLA  G+ HR+ICPHTHHQNGV+ERKHRHIV++G            FWD++
Sbjct: 279 GGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYA 338

Query: 560 FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
           F +SVYLINRLPS      +P+  ++   PD++FL+VFGCSCFP LRPY+  K QFR+ E
Sbjct: 339 FLTSVYLINRLPSSSIQQDVPFRKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQE 398

Query: 380 CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
           C+FLGYS +HKGYKCL  +GR+F+SKDV+F EN FPYP LF  + T  P+++    PL V
Sbjct: 399 CVFLGYSTSHKGYKCLAPSGRVFISKDVIFCENRFPYPTLFSPS-TPSPSSSSITVPLVV 457

Query: 200 VPFNTAQPAT 171
              N   P T
Sbjct: 458 T--NPQAPIT 465



 Score =  135 bits (339), Expect(3) = 7e-96
 Identities = 59/96 (61%), Positives = 74/96 (77%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGHP+  VL SV  +CN P INK+  DFC +CC+GK HKLPSQ S TVY  P ELI
Sbjct: 152  WHSRLGHPHNDVLKSVFKLCNFPNINKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFELI 211

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLWGPAP++S  GY+YY++FVDA +R+T I+ LK
Sbjct: 212  YSDLWGPAPVLSDNGYQYYVTFVDAHTRFTWIFMLK 247



 Score = 40.8 bits (94), Expect(3) = 7e-96
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           L +F QF  +V NQF   IKA+Q+DWGG
Sbjct: 253 LDVFKQFHAMVRNQFQLPIKAIQTDWGG 280


>dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subterraneum]
          Length = 1409

 Score =  242 bits (617), Expect(3) = 2e-95
 Identities = 103/163 (63%), Positives = 132/163 (80%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFRPF+ YL ++G+VHRLICPHTHHQNGV+ERKHRH+VD+G           ++WDH+
Sbjct: 647  GGEFRPFTSYLDNLGIVHRLICPHTHHQNGVVERKHRHVVDLGLTLLSQANLPLTYWDHA 706

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++V+LINRLP+   N  +PYTT++QK PD++ LKVFG +CFPL+RPY++ KF FR+ E
Sbjct: 707  FLTAVHLINRLPTASLNFKVPYTTLFQKDPDYNSLKVFGSACFPLIRPYNSHKFDFRSHE 766

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPT 252
            CIFLGYS  HKGYKCL  TGR++VSKDV+FNE+ FPY +LFPT
Sbjct: 767  CIFLGYSTTHKGYKCLSPTGRIYVSKDVMFNESRFPYESLFPT 809



 Score =  125 bits (314), Expect(3) = 2e-95
 Identities = 61/103 (59%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKID---FCVACCMGKHHKLPSQPSTTVYSHP 950
            LWH R GHPN   L S L  CN P  N NK D   FC  CCMGK H+L S  S T Y+HP
Sbjct: 517  LWHLRPGHPNDQTLKSTLKQCNIPFTN-NKSDVSNFCTTCCMGKAHRLHSSASKTTYTHP 575

Query: 949  LELIFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            LEL+F DL GP+P VSS+G+ YYI+F+DA+SRYT IY LK  S
Sbjct: 576  LELVFSDLRGPSPSVSSLGFHYYITFIDAYSRYTWIYLLKSKS 618



 Score = 33.9 bits (76), Expect(3) = 2e-95
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 825 ALSIFTQFQKLVENQFNCKIKAVQSDWGGGRISPFQS 715
           A  IF QF+ + E Q    +K++Q+DW GG   PF S
Sbjct: 620 AFPIFKQFKTMAELQLGHSLKSLQTDW-GGEFRPFTS 655


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  236 bits (603), Expect(3) = 1e-94
 Identities = 103/188 (54%), Positives = 133/188 (70%)
 Frame = -1

Query: 740 GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
           GGEFR F+ YLA  G+ HRLICPHTHHQNG++ERKHRHIV++G            FWDH+
Sbjct: 168 GGEFRSFTSYLAQNGIQHRLICPHTHHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHA 227

Query: 560 FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
           F +SVYLINRLPS    H +P+  ++ + PD++FL++FGCSCFP LRPY+  K Q R+ E
Sbjct: 228 FLTSVYLINRLPSSSIQHDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQE 287

Query: 380 CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
           C+FLGYS +HKGYKCL  TGR+F+SKDV+F E  FPYP+LFP + T  P ++  + PL +
Sbjct: 288 CVFLGYSTSHKGYKCLAPTGRIFISKDVIFCETRFPYPSLFPASATNPPTSSIPV-PLVI 346

Query: 200 VPFNTAQP 177
                  P
Sbjct: 347 TSLQPPMP 354



 Score =  120 bits (300), Expect(3) = 1e-94
 Identities = 53/96 (55%), Positives = 67/96 (69%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGHP+  V+ S+  +CN PIINK   DFC  C +GK HKLPS  S TVY  P ELI
Sbjct: 41   WHSRLGHPHNDVMKSMFRLCNFPIINKTVSDFCTPCRLGKSHKLPSTLSKTVYHTPFELI 100

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLW PAP+ S  GY+YY++FVDA +R+  I+  K
Sbjct: 101  YSDLWRPAPITSDNGYQYYVTFVDAHTRFIWIFLFK 136



 Score = 42.4 bits (98), Expect(3) = 1e-94
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = -3

Query: 843 FIFLKSA--LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           F+F   A  L +F QF  +++NQF   IKA+Q+DWGG
Sbjct: 133 FLFKSKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGG 169


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score =  228 bits (581), Expect(3) = 1e-94
 Identities = 100/179 (55%), Positives = 132/179 (73%), Gaps = 2/179 (1%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGE+R F+ +LA+ G+ HRLICPHTHHQNGV+ERKHRHIVD+G           +FWD++
Sbjct: 547  GGEYRSFTAFLATHGITHRLICPHTHHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYA 606

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++VYLINRLP+   N  IP+T ++++ PD+ FLK FGC+CFP LRPY   K  FR+ E
Sbjct: 607  FSTAVYLINRLPTASLNFDIPFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQE 666

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATA--CTLQP 210
            C+FLGYS +HKGYKCL A+G++++SKDV+FNE  FPY +LF  T T  P+ +   TL P
Sbjct: 667  CVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLFQHTSTPVPSPSQYFTLNP 725



 Score =  127 bits (318), Expect(3) = 1e-94
 Identities = 58/99 (58%), Positives = 72/99 (72%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH RL HPN HVL  VL+ CN    N+N  +FC +CC+GK H+LPS  S +VYS PL+LI
Sbjct: 420  WHTRLSHPNSHVLKLVLNHCNIAPSNRNVSEFCSSCCVGKSHRLPSLVSESVYSAPLDLI 479

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            F DLWGP+ +VS  GY YY+SF+DAFS++T IY LK  S
Sbjct: 480  FTDLWGPSHVVSHSGYVYYVSFIDAFSKFTWIYPLKSKS 518



 Score = 43.5 bits (101), Expect(3) = 1e-94
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           LS+F QF+ +VE Q N KIK++QSDWGG
Sbjct: 521 LSVFQQFKAMVELQLNTKIKSIQSDWGG 548


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  227 bits (578), Expect(3) = 1e-93
 Identities = 95/167 (56%), Positives = 129/167 (77%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGE+R F+ +LA+ G+ HR+ICPHTHHQNGV+ERKHRHIV++G            FWD +
Sbjct: 570  GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 629

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++VYLINRLPS   N ++P+TT++ K PD+ FL+ FGC+CFP LRPY + K  FR+ E
Sbjct: 630  FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQE 689

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTK 240
            C+FLGYS +HKGYKCL ++GR+++SKDV+FNE+ FPY +LF  +LT+
Sbjct: 690  CVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQ 736



 Score =  124 bits (310), Expect(3) = 1e-93
 Identities = 54/97 (55%), Positives = 70/97 (72%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLEL 941
            +WH RLGHPN HVL  VL+ CN    N +  +FC +CC+GK  +LPS  S T+YS PL++
Sbjct: 442  MWHTRLGHPNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDV 501

Query: 940  IFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            IF DLWGP+ + S  GY YY++F+DAFS+YT IY LK
Sbjct: 502  IFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLK 538



 Score = 44.7 bits (104), Expect(3) = 1e-93
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           LS+F QF+ + E QFN KIK+VQSDWGG
Sbjct: 544 LSVFQQFKAMAELQFNTKIKSVQSDWGG 571


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1279

 Score =  227 bits (578), Expect(3) = 1e-93
 Identities = 95/167 (56%), Positives = 129/167 (77%)
 Frame = -1

Query: 740 GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
           GGE+R F+ +LA+ G+ HR+ICPHTHHQNGV+ERKHRHIV++G            FWD +
Sbjct: 491 GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 550

Query: 560 FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
           F ++VYLINRLPS   N ++P+TT++ K PD+ FL+ FGC+CFP LRPY + K  FR+ E
Sbjct: 551 FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQE 610

Query: 380 CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTK 240
           C+FLGYS +HKGYKCL ++GR+++SKDV+FNE+ FPY +LF  +LT+
Sbjct: 611 CVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQ 657



 Score =  124 bits (310), Expect(3) = 1e-93
 Identities = 54/97 (55%), Positives = 70/97 (72%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLEL 941
            +WH RLGHPN HVL  VL+ CN    N +  +FC +CC+GK  +LPS  S T+YS PL++
Sbjct: 363  MWHTRLGHPNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDV 422

Query: 940  IFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            IF DLWGP+ + S  GY YY++F+DAFS+YT IY LK
Sbjct: 423  IFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLK 459



 Score = 44.7 bits (104), Expect(3) = 1e-93
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           LS+F QF+ + E QFN KIK+VQSDWGG
Sbjct: 465 LSVFQQFKAMAELQFNTKIKSVQSDWGG 492


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score =  221 bits (562), Expect(3) = 3e-93
 Identities = 102/190 (53%), Positives = 134/190 (70%)
 Frame = -1

Query: 740 GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
           GGEFR F+ YLA  G+ HR+ICPHTHHQNGV+E KHRHIV++G           SFWD++
Sbjct: 265 GGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWDYA 324

Query: 560 FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
           F +SVYLINRLPS      +P+  ++ + PD++FL+VFGCSCFP L PY+  K QFR+ E
Sbjct: 325 FLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRSQE 384

Query: 380 CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
           C+FLGYS +HKGYKCL  +GR+F+SKDV+F EN FPYP++FP + T   +++    PL +
Sbjct: 385 CVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPPS-TPSSSSSPIFVPLVI 443

Query: 200 VPFNTAQPAT 171
              N   P T
Sbjct: 444 T--NPQAPVT 451



 Score =  131 bits (330), Expect(3) = 3e-93
 Identities = 57/96 (59%), Positives = 73/96 (76%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGH +  V+ SV  +CN PIINK+  DFC +CC+GK HKLPSQ S TVY  P ELI
Sbjct: 138  WHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFELI 197

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLWGPAP++S  GY+YY++ VDA +R+T I+ LK
Sbjct: 198  YSDLWGPAPVLSDNGYQYYVTLVDAHTRFTWIFLLK 233



 Score = 41.6 bits (96), Expect(3) = 3e-93
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           L +F QF  +V+NQF   IKA+Q+DWGG
Sbjct: 239 LDVFKQFHAMVQNQFQLPIKAIQTDWGG 266


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score =  221 bits (562), Expect(3) = 3e-93
 Identities = 102/190 (53%), Positives = 134/190 (70%)
 Frame = -1

Query: 740 GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
           GGEFR F+ YLA  G+ HR+ICPHTHHQNGV+E KHRHIV++G           SFWD++
Sbjct: 244 GGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWDYA 303

Query: 560 FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
           F +SVYLINRLPS      +P+  ++ + PD++FL+VFGCSCFP L PY+  K QFR+ E
Sbjct: 304 FLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRSQE 363

Query: 380 CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
           C+FLGYS +HKGYKCL  +GR+F+SKDV+F EN FPYP++FP + T   +++    PL +
Sbjct: 364 CVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPPS-TPSSSSSPIFVPLVI 422

Query: 200 VPFNTAQPAT 171
              N   P T
Sbjct: 423 T--NPQAPVT 430



 Score =  131 bits (330), Expect(3) = 3e-93
 Identities = 57/96 (59%), Positives = 73/96 (76%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGH +  V+ SV  +CN PIINK+  DFC +CC+GK HKLPSQ S TVY  P ELI
Sbjct: 117  WHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFELI 176

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLWGPAP++S  GY+YY++ VDA +R+T I+ LK
Sbjct: 177  YSDLWGPAPVLSDNGYQYYVTLVDAHTRFTWIFLLK 212



 Score = 41.6 bits (96), Expect(3) = 3e-93
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           L +F QF  +V+NQF   IKA+Q+DWGG
Sbjct: 218 LDVFKQFHAMVQNQFQLPIKAIQTDWGG 245


>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1516

 Score =  224 bits (570), Expect(3) = 4e-92
 Identities = 98/163 (60%), Positives = 121/163 (74%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFR F+ YL  +G+ HRLICPHTHHQNGV+ERKHRH+VD+G            +WDH+
Sbjct: 721  GGEFRSFTSYLTDLGITHRLICPHTHHQNGVVERKHRHVVDLGLTLLSQANLPLKYWDHA 780

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++V+LINRLP+      IPYT ++ K P+F+  KVFG +CFPLLRPY+  KF  R+ E
Sbjct: 781  FLTAVHLINRLPTASLQFKIPYTILFNKSPEFTSFKVFGSACFPLLRPYNAHKFDVRSHE 840

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPT 252
            CIFLGYS  HKGYKCL  TGR+FVSKDV+FNE+ FPY +LF T
Sbjct: 841  CIFLGYSNTHKGYKCLSPTGRIFVSKDVLFNEHRFPYKSLFST 883



 Score =  132 bits (331), Expect(3) = 4e-92
 Identities = 63/103 (61%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKID---FCVACCMGKHHKLPSQPSTTVYSHP 950
            LWH RLGHPN   L   L+ CN P  N NK D    C ACCMGK H+L S  S T Y+HP
Sbjct: 591  LWHLRLGHPNDQTLKFTLNQCNIPFTN-NKSDVSALCTACCMGKAHRLHSSASQTTYNHP 649

Query: 949  LELIFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            LEL+F DLWGP+P VSS+G+ YYI+F+DAFSRYT IY LK  S
Sbjct: 650  LELVFSDLWGPSPTVSSLGFHYYITFIDAFSRYTWIYLLKSKS 692



 Score = 34.3 bits (77), Expect(3) = 4e-92
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -3

Query: 825 ALSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           A ++F QF+ + E Q    +KA+Q+DWGG
Sbjct: 694 AFTVFKQFKAMAELQLGYPLKALQTDWGG 722


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  228 bits (582), Expect(3) = 4e-92
 Identities = 104/190 (54%), Positives = 133/190 (70%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGE+R F+ YL  +G+ HRLICPHTHHQNGV ERKHRHIV++G            FWDHS
Sbjct: 628  GGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHS 687

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++VYLINRLPS    +++PY  ++ +PPD+  L++FGCSCFP LRPY+  K QFR+ E
Sbjct: 688  FLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQE 747

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
            C+FLGYS +HKGYKCL A GRL++SKDVVFNE  FPY +LF ++         ++ PL +
Sbjct: 748  CVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKASDSQLPISV-PLTI 806

Query: 200  VPFNTAQPAT 171
             P  T   AT
Sbjct: 807  NPTPTPTHAT 816



 Score =  124 bits (310), Expect(3) = 4e-92
 Identities = 50/96 (52%), Positives = 71/96 (73%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGHPN+ V+  V    N  +++ NK +FC  CC+GK H+LPS  S T+Y+ P +L+
Sbjct: 501  WHSRLGHPNVDVMKHVSRNYNIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLV 560

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLWGPAP+ S+ GY+YY++FVDA +R+T IY LK
Sbjct: 561  YSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLK 596



 Score = 37.7 bits (86), Expect(3) = 4e-92
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -3

Query: 819 SIFTQFQKLVENQFNCKIKAVQSDWGG 739
           ++F QF  +V+NQ++  IKA+Q+DWGG
Sbjct: 603 NVFKQFHAMVKNQYHHPIKALQTDWGG 629


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score =  228 bits (582), Expect(3) = 4e-92
 Identities = 104/190 (54%), Positives = 133/190 (70%)
 Frame = -1

Query: 740 GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
           GGE+R F+ YL  +G+ HRLICPHTHHQNGV ERKHRHIV++G            FWDHS
Sbjct: 293 GGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHS 352

Query: 560 FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
           F ++VYLINRLPS    +++PY  ++ +PPD+  L++FGCSCFP LRPY+  K QFR+ E
Sbjct: 353 FLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQE 412

Query: 380 CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATACTLQPLGV 201
           C+FLGYS +HKGYKCL A GRL++SKDVVFNE  FPY +LF ++         ++ PL +
Sbjct: 413 CVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKASDSQLPISV-PLTI 471

Query: 200 VPFNTAQPAT 171
            P  T   AT
Sbjct: 472 NPTPTPTHAT 481



 Score =  124 bits (310), Expect(3) = 4e-92
 Identities = 50/96 (52%), Positives = 71/96 (73%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RLGHPN+ V+  V    N  +++ NK +FC  CC+GK H+LPS  S T+Y+ P +L+
Sbjct: 166  WHSRLGHPNVDVMKHVSRNYNIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLV 225

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLWGPAP+ S+ GY+YY++FVDA +R+T IY LK
Sbjct: 226  YSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLK 261



 Score = 37.7 bits (86), Expect(3) = 4e-92
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -3

Query: 819 SIFTQFQKLVENQFNCKIKAVQSDWGG 739
           ++F QF  +V+NQ++  IKA+Q+DWGG
Sbjct: 268 NVFKQFHAMVKNQYHHPIKALQTDWGG 294


>gb|KYP52268.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 828

 Score =  218 bits (556), Expect(3) = 1e-90
 Identities = 96/175 (54%), Positives = 126/175 (72%)
 Frame = -1

Query: 749  IGGGGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFW 570
            I  GG+FR F+ YLA  G+ H LICP+THHQNGV+E KHRHIV++G            FW
Sbjct: 564  IDWGGKFRSFTSYLAQHGIHHCLICPNTHHQNGVVECKHRHIVELGLTLLAQAHFPMHFW 623

Query: 569  DHSFHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFR 390
            D++F +SVYLINRLPS      +P+  ++ + PD+SFL +FGCSCFP LRPY+  K QFR
Sbjct: 624  DYAFLTSVYLINRLPSSSIQQDVPFRKLFHQLPDYSFLCIFGCSCFPCLRPYNKTKLQFR 683

Query: 389  AAECIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLTKQPATA 225
            + EC+FLGYS +HKGYKCL ++GR F+SKDV+F E+ FPYP+LFP +    P ++
Sbjct: 684  SQECVFLGYSTSHKGYKCLASSGRTFISKDVIFCESCFPYPSLFPPSTPSSPPSS 738



 Score =  129 bits (323), Expect(3) = 1e-90
 Identities = 57/96 (59%), Positives = 71/96 (73%)
 Frame = -2

Query: 1117 WHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLELI 938
            WH+RL HP+  VL  V  +CN PIINK+  DFC +CC+GK HKLPSQ S TVY  P ELI
Sbjct: 440  WHSRLRHPHNDVLKYVFKLCNFPIINKSVFDFCTSCCLGKSHKLPSQLSKTVYHTPFELI 499

Query: 937  FCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLK 830
            + DLWG AP +S  GY+YY++FVDA +R+T I+ LK
Sbjct: 500  YSDLWGLAPFLSDNGYQYYVTFVDAHTRFTWIFLLK 535



 Score = 38.1 bits (87), Expect(3) = 1e-90
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGG 739
           L +F QF  +V+NQF   +K +Q DWGG
Sbjct: 541 LDVFKQFHAMVQNQFQLPVKEIQIDWGG 568


>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1489

 Score =  228 bits (582), Expect(2) = 4e-90
 Identities = 104/194 (53%), Positives = 137/194 (70%), Gaps = 4/194 (2%)
 Frame = -1

Query: 740  GGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDHS 561
            GGEFRPF++ L+ +GV HRLICPHTHHQNGV+ERKHRH+VD+G           ++WDH+
Sbjct: 702  GGEFRPFTKILSELGVSHRLICPHTHHQNGVVERKHRHVVDLGLTLLSQANLPITYWDHA 761

Query: 560  FHSSVYLINRLPSPHQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRAAE 381
            F ++V+LINRLP+   +  IPYT ++ K PD+  LKVFGC+CFPLLRPY++ K  FR+ E
Sbjct: 762  FLTAVHLINRLPTAALSFKIPYTVLFNKIPDYHSLKVFGCACFPLLRPYNSHKLDFRSHE 821

Query: 380  CIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPT----TLTKQPATACTLQ 213
            CIF+GYS  HKGYKCL  +G++F+SKDV+FNE  FPY  LFP+    T+   P     + 
Sbjct: 822  CIFMGYSNTHKGYKCLSPSGKIFISKDVLFNEYRFPYQFLFPSPMKNTILPSPVPDIPIS 881

Query: 212  PLGVVPFNTAQPAT 171
             L +   N +Q AT
Sbjct: 882  TLPIGNHNHSQLAT 895



 Score =  133 bits (335), Expect(2) = 4e-90
 Identities = 63/102 (61%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINK-NKIDF-CVACCMGKHHKLPSQPSTTVYSHPL 947
            +WH RLGHPN   L S L +CN    N  N +   C ACCMGK H+L S PS TVYSHPL
Sbjct: 572  MWHLRLGHPNNQTLKSALKLCNISFQNNDNDVSLLCTACCMGKAHRLHSPPSQTVYSHPL 631

Query: 946  ELIFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            EL+F DLWGPAP  SS+GY YYI+F+DAFS+YT IY LK  S
Sbjct: 632  ELVFSDLWGPAPSTSSLGYHYYITFIDAFSKYTWIYLLKSKS 673


>dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subterraneum]
          Length = 1496

 Score =  229 bits (584), Expect(3) = 6e-90
 Identities = 107/187 (57%), Positives = 137/187 (73%), Gaps = 2/187 (1%)
 Frame = -1

Query: 743  GGGEFRPFSQYLASIGVVHRLICPHTHHQNGVIERKHRHIVDMGXXXXXXXXXXXSFWDH 564
            GGGEFRPF+++L ++G+VHRL CPHTHHQNG++ERKHRH+V+ G            +WDH
Sbjct: 679  GGGEFRPFTKFLTNLGIVHRLTCPHTHHQNGLVERKHRHLVETGLTLLSQAQLPLKYWDH 738

Query: 563  SFHSSVYLINRLPSP-HQNHSIPYTTIYQKPPDFSFLKVFGCSCFPLLRPYHNQKFQFRA 387
            +F ++ +LINRLP+P  QNHS PY T+  K PD+  LKVFGC+CFP LRPYH+ K  +R+
Sbjct: 739  AFITAAFLINRLPTPILQNHS-PYFTLLHKHPDYKALKVFGCACFPFLRPYHSTKLAYRS 797

Query: 386  AECIFLGYSANHKGYKCLDATGRLFVSKDVVFNENAFPYPNLFPTTLT-KQPATACTLQP 210
             ECIFLGYSA +KGYKCL   G ++VSKDV+FNE+ FPYP LF TT T K P  + T  P
Sbjct: 798  KECIFLGYSAMYKGYKCLSPDGHVYVSKDVLFNEHKFPYPLLFSTTSTSKSPILSPT--P 855

Query: 209  LGVVPFN 189
            +  VP +
Sbjct: 856  MSQVPLH 862



 Score =  113 bits (282), Expect(3) = 6e-90
 Identities = 51/100 (51%), Positives = 67/100 (67%)
 Frame = -2

Query: 1120 LWHNRLGHPNIHVLNSVLSMCNKPIINKNKIDFCVACCMGKHHKLPSQPSTTVYSHPLEL 941
            LWH RLGHP+   L   L +CN  + +K   D C ACC+GK H+L +  S TVY+ P EL
Sbjct: 552  LWHARLGHPHYDSLRLALQLCNIHMPSKPHTDVCSACCLGKSHRLHAPLSNTVYTKPFEL 611

Query: 940  IFCDLWGPAPMVSSMGYKYYISFVDAFSRYT*IYFLKVSS 821
            + CDLWGPAP+ SS G+ Y+++ VDAFSR+  +Y LK  S
Sbjct: 612  VVCDLWGPAPIKSSSGFTYFLTCVDAFSRFVWVYPLKRKS 651



 Score = 40.4 bits (93), Expect(3) = 6e-90
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = -3

Query: 822 LSIFTQFQKLVENQFNCKIKAVQSDWGGGRISPF 721
           L+ F +F+ +VE QF+CKIK VQ+D GGG   PF
Sbjct: 654 LTKFIEFKNMVELQFDCKIKTVQTD-GGGEFRPF 686