BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00019167
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX79967.1| RNA-binding protein, partial [Trifolium pratense]       63   2e-09
ref|XP_013466814.1| RNA recognition motif [Medicago truncatula] ...    62   1e-08
dbj|GAU43021.1| hypothetical protein TSUD_12760 [Trifolium subte...    55   4e-06
gb|PNX62455.1| RNA-binding protein [Trifolium pratense]                51   6e-06

>gb|PNX79967.1| RNA-binding protein, partial [Trifolium pratense]
          Length = 217

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
 Frame = -2

Query: 256 EKKAVPVKCFDTPIAEHLLTCA-EEVKDMEMFDAASAEK--PETPATQKEK----KAVPV 98
           + + VPVKCFDT +AE  LTCA EEVKD+EMFDAA AE   PETP+  K K    K + V
Sbjct: 112 QSQTVPVKCFDTSLAEDKLTCAKEEVKDIEMFDAAPAESKVPETPSIGKAKNDASKTICV 171

Query: 97  KCVDTPIAEHKL-----TCAEEVK-----DMEMFKAASAEK 5
           + +   +   ++      C E V      D+E   A +AEK
Sbjct: 172 RNLSFDVERAEIENIFKDCGEVVDVRLHVDVEFATAEAAEK 212


>ref|XP_013466814.1| RNA recognition motif [Medicago truncatula]
 gb|KEH40855.1| RNA recognition motif [Medicago truncatula]
          Length = 668

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 6/54 (11%)
 Frame = -2

Query: 256 EKKAVPVKCFDTPIAEHLLTCAEEVKDMEM----FDAASAEK--PETPATQKEK 113
           + + +PVKCFDT +AE  L CA++VKD++M     DAASAE   PETPATQKEK
Sbjct: 393 QSQTIPVKCFDTSLAEDKLACAKDVKDIQMSDADADAASAENKLPETPATQKEK 446


>dbj|GAU43021.1| hypothetical protein TSUD_12760 [Trifolium subterraneum]
          Length = 591

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 15/87 (17%)
 Frame = -2

Query: 358 AEHKLTCP-EEVKDMEMFDAASTEKEVPETPATQKEK----KAVPVK--CFDTPIAE--- 209
           A  KLTC  EEVKD+EMFDAAS E +VPETP+T KEK    K + V+   FD   AE   
Sbjct: 281 AAQKLTCAKEEVKDIEMFDAASAESKVPETPSTIKEKNDASKTICVRNLSFDVERAEIEN 340

Query: 208 HLLTCAEEVK-----DMEMFDAASAEK 143
               C E V      D+E   A +AEK
Sbjct: 341 IFKDCGEVVDVRLHVDVEFTTAEAAEK 367


>gb|PNX62455.1| RNA-binding protein [Trifolium pratense]
          Length = 96

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 15/83 (18%)
 Frame = -2

Query: 346 LTCP-EEVKDMEMFDAASTEKEVPETPATQKEK----KAVPVK--CFDTPIAE---HLLT 197
           +TC  EEVKD+EMFDAAS E +VPETP+T KEK    K + V+   FD   AE       
Sbjct: 1   MTCAKEEVKDIEMFDAASAESKVPETPSTGKEKNDGSKTICVRNLSFDVERAEIENIFKD 60

Query: 196 CAEEVK-----DMEMFDAASAEK 143
           C E V      D+E   A +AEK
Sbjct: 61  CGEVVDVRLHVDVEFATAEAAEK 83