BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00019164
         (1218 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subte...   169   1e-44
gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]      165   2e-41
gb|PNY10806.1| histone deacetylase [Trifolium pratense]               165   7e-41
gb|PNY02599.1| retrovirus-related Pol polyprotein from transposo...   140   3e-34
gb|PNX99033.1| retrovirus-related Pol polyprotein from transposo...   139   4e-34
gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]        135   2e-33
gb|PNY05793.1| histone deacetylase [Trifolium pratense]               141   1e-32
dbj|GAU26016.1| hypothetical protein TSUD_64040 [Trifolium subte...   140   1e-32
gb|PNX90864.1| retrovirus-related Pol polyprotein from transposo...   136   2e-32
gb|PNX63176.1| retrovirus-related Pol polyprotein from transposo...   132   4e-32
gb|PNX63257.1| retrovirus-related Pol polyprotein from transposo...   131   4e-32
gb|PNX79340.1| retrovirus-related Pol polyprotein from transposo...   138   4e-32
gb|PNX90878.1| retrovirus-related Pol polyprotein from transposo...   132   1e-31
gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]      138   1e-31
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   137   2e-31
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   137   2e-31
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte...   137   2e-31
gb|PNX89792.1| retrovirus-related Pol polyprotein from transposo...   132   4e-31
gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan]        128   4e-31
gb|PNY18109.1| retrovirus-related Pol polyprotein from transposo...   136   4e-31

>dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subterraneum]
          Length = 392

 Score =  169 bits (427), Expect = 1e-44
 Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 1/222 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTL+ S+L R +  +H++QVW++IH HF  HLK K+RQ             SI E+
Sbjct: 92  TWLLSTLAESVLPRTIGCRHAFQVWDQIHKHFEAHLKAKVRQLRSELKNVKKGTKSITEF 151

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILMC-KSEISNLSELKSLLMI 478
           V R++ +A++L +IG  +SEQD  D +L+GL EEYN FV+++  +S+  +L +++ LL++
Sbjct: 152 VLRVRVIADTLISIGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLYDIEGLLLV 211

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QESQ +KF+QEL   +  A++AH                      GN+            
Sbjct: 212 QESQLEKFRQELSTPSASANLAH-----------------SRGGRGNS-----GARGRGR 249

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIP 784
                   + + TGN PTCQLCGKYGH V+DCW++FDENF+P
Sbjct: 250 STRGRGRPAASPTGNRPTCQLCGKYGHHVIDCWYRFDENFVP 291


>gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]
          Length = 720

 Score =  165 bits (418), Expect = 2e-41
 Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 1/225 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTL+ S+L R +  +H++QVW++IH +F  HLK K+RQ             SI+E+
Sbjct: 93  TWLLSTLAESVLPRTVGCRHAFQVWDQIHKYFDAHLKAKVRQLRSELKTVKKGTKSISEF 152

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILMC-KSEISNLSELKSLLMI 478
           V R++ +A++L +IG  +SEQD  D +L+GL EEYN FV+++  +S+  +L +++ LL++
Sbjct: 153 VLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLFDIEGLLLV 212

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QESQ  KF+QEL +    A+VAH                       N             
Sbjct: 213 QESQLAKFRQELSLPAASANVAH----------------------SNGGRGNSGARGRGR 250

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQEA 793
                   S++STG  PTCQLC KYGH V DCW+++DENF+P +A
Sbjct: 251 SARGRGRASSSSTGTRPTCQLCNKYGHHVRDCWYRYDENFVPVQA 295


>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
          Length = 1441

 Score =  165 bits (418), Expect = 7e-41
 Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 1/225 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTL+ S+L R +  +H++QVW++IH +F  HLK K+RQ             SI+E+
Sbjct: 93  TWLLSTLAESVLPRTVGCRHAFQVWDQIHKYFDAHLKAKVRQLRSELKTVKKGTKSISEF 152

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILMC-KSEISNLSELKSLLMI 478
           V R++ +A++L +IG  +SEQD  D +L+GL EEYN FV+++  +S+  +L +++ LL++
Sbjct: 153 VLRVRAIADTLISIGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLFDIEGLLLV 212

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QESQ  KF+QEL +    A+VAH                       N             
Sbjct: 213 QESQLAKFRQELSLPAASANVAH----------------------SNGGRGNSGARGRGR 250

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQEA 793
                   S++STG  PTCQLC KYGH V DCW+++DENF+P +A
Sbjct: 251 SARGRGRASSSSTGTRPTCQLCNKYGHHVRDCWYRYDENFVPVQA 295


>gb|PNY02599.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 956

 Score =  140 bits (354), Expect(2) = 3e-34
 Identities = 81/217 (37%), Positives = 117/217 (53%), Gaps = 1/217 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTLS S+L R+L  +H+ +VW+KIH +F   LK++ RQ             SINEY
Sbjct: 108 TWLLSTLSESVLPRVLNCKHAHEVWDKIHRYFNSVLKSRARQLRSELKNTKKHARSINEY 167

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+T+ NSL A+G  VSEQ+  D +L+GL EE+NSFV+++  + +   + ++++LL++
Sbjct: 168 LLRIKTIVNSLIAVGDVVSEQEQVDAILEGLPEEFNSFVMMIYSRFDSPTVEDVEALLLL 227

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE+QF+KFKQEL    V A VAH                   A Y  N            
Sbjct: 228 QEAQFEKFKQELSTPTVSAHVAHTEAKSSESVNDQDLSEAGTAHYNVN---SNRGRGKGK 284

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFD 769
                   S +S      CQ+CGK  H  +  WH++D
Sbjct: 285 SRGRGRGRSQSSAQGKVQCQICGKPNHDAIGYWHKYD 321



 Score = 34.7 bits (78), Expect(2) = 3e-34
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 27  EVPRQIDLDENRLNGINSIAYD*WLVQDQMI 119
           ++P Q D  E R  G+NS AY  WLV+DQ +
Sbjct: 76  QIPLQFDSMEARAQGMNSAAYQQWLVKDQTL 106


>gb|PNX99033.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1101

 Score =  139 bits (350), Expect(2) = 4e-34
 Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 1/228 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTLS S+L R+L  +H+ +VW+KIH +F   LK++ RQ             SINEY
Sbjct: 102 TWLLSTLSESVLPRVLSCRHAHEVWDKIHKYFNSVLKSRTRQLRSELKNTKKLARSINEY 161

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+T+ NSL A+G  VSEQ+  D +L+GL EE+NSFV+++  + +   + ++++LL++
Sbjct: 162 LLRIKTIVNSLIAVGDSVSEQEQVDAILEGLPEEFNSFVMMVYSRFDSPTVEDVEALLLL 221

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE+QF+KFKQEL   +V A+VAH                     Y  N            
Sbjct: 222 QEAQFEKFKQELSNPSVSANVAHADAQSSDSVNNQDLPETASEHY--NVNVHRGRGRGKG 279

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQEAQNN 802
                    + S G +  CQ+C K  H  ++CW+++D    P   +NN
Sbjct: 280 KGRGRGRNQHQSQGKV-ECQICSKSNHDAINCWYRYD----PPAMRNN 322



 Score = 35.8 bits (81), Expect(2) = 4e-34
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 27  EVPRQIDLDENRLNGINSIAYD*WLVQDQMI 119
           ++P Q D  E+R+ G NS AY  WLV+DQ +
Sbjct: 70  QIPLQFDSLEDRIQGTNSTAYQQWLVKDQTL 100


>gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]
          Length = 280

 Score =  135 bits (341), Expect = 2e-33
 Identities = 81/239 (33%), Positives = 125/239 (52%), Gaps = 13/239 (5%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQ-XXXXXXXXXXXXHSINE 298
           +WLLS+LS S+L R+L  +HS+++W+KIH H+Y HL  K RQ               I+E
Sbjct: 4   SWLLSSLSESVLPRVLGCKHSYEIWDKIHKHYYSHLHAKKRQLRSELKSSKKGPSQPISE 63

Query: 299 YVTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILMC-KSEISNLSELKSLLM 475
           Y+ RI+ + NSL  +G  V++QD  D +LDGL E+YNSF++++  +S+  ++++++SLL+
Sbjct: 64  YILRIREIINSLIVVGDLVTDQDQIDTILDGLPEDYNSFIMMIYGRSDSISVTDVESLLL 123

Query: 476 IQESQFDKFKQELVVSNVIADVAH-------LXXXXXXXXXXXXXXXXXHARY-GNNF-- 625
           +QE+Q +K++Q+L   +V  +V                             RY G  +  
Sbjct: 124 VQEAQLEKYRQDLTSPSVSVNVVQGPQDSQFQSQSQFVSNRGGFQFSTRGGRYRGGRYRC 183

Query: 626 XXXXXXXXXXXXXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFI-PQEAQN 799
                               N   G  PTCQLC KYGH    CW++FDE FI P +  N
Sbjct: 184 RGRNRCGGRYRGGRYRGRGRNRGGGQRPTCQLCYKYGHDAFHCWNRFDEAFIQPSQPPN 242


>gb|PNY05793.1| histone deacetylase [Trifolium pratense]
          Length = 1485

 Score =  141 bits (355), Expect = 1e-32
 Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTLS+ +L R+L  +H++QVW+KIH +F   LK + RQ             SI EY
Sbjct: 114 TWLLSTLSDGVLPRVLGCKHAYQVWDKIHKYFNSLLKARARQLRSELKNTKKLARSIGEY 173

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+T+ +SLTAIG  VS+Q+  D +L+GL EE+NSFV+++  + +   + ++++LLM+
Sbjct: 174 LLRIKTIIDSLTAIGDTVSDQEHIDAILEGLPEEFNSFVMMIYSRLDTPTVEDVEALLMV 233

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE+QF+KF+QEL   NV A++A                      Y               
Sbjct: 234 QEAQFEKFRQELASPNVSANLAQSEAKTSAESVNHENTEVGTEHYA----AGGKGRGRGR 289

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQE 790
                   S+ +  +  TCQ+CGK GH    CW+++D N  P++
Sbjct: 290 GRGRGRGRSSKNPHSDSTCQICGKNGHEASGCWYRYDPNPTPKQ 333


>dbj|GAU26016.1| hypothetical protein TSUD_64040 [Trifolium subterraneum]
          Length = 942

 Score =  140 bits (354), Expect = 1e-32
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 1/217 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+S+L R+L  +HS +VW+KIH +F   LK++IRQ             S++EY
Sbjct: 102 TWLLSTISDSVLPRVLHCKHSHEVWDKIHKYFNSVLKSRIRQLRSELKNTKKLARSVSEY 161

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+   VSEQ+  D +LDGL E++NSFV+++  + +   + +++ LLM+
Sbjct: 162 LLRIKSIVNSLIAMSEVVSEQEQVDAILDGLPEDFNSFVMMVYSRFDTPTVEDIEGLLML 221

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE+QF+KF+QEL   NV A+VA +                 +  YG+N            
Sbjct: 222 QEAQFEKFRQELANPNVSANVAQMESKNHHSNQDTEDTESVNESYGSN--TYRGRGRGKG 279

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFD 769
                     T       CQ+C K+ H   +CW+++D
Sbjct: 280 RARGRDKAPITPNAGKVQCQICAKHNHDAANCWYRYD 316


>gb|PNX90864.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 401

 Score =  136 bits (342), Expect = 2e-32
 Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 1/216 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+++L R+L  +H+++VW+ IH +F   LK + RQ             S+NEY
Sbjct: 101 TWLLSTISDNVLPRVLSCKHAYEVWDTIHKYFNSVLKARARQLRSELKNTKKLTRSVNEY 160

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+G  VS Q+  D VL+GL EEYNSFV+L+  + E   + ++++LL++
Sbjct: 161 LLRIKSIVNSLIAVGDVVSVQEQVDAVLEGLPEEYNSFVMLVYSRFETPTVEDVEALLLL 220

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE QF+KF+QEL   +V A+VAH+                    Y  N            
Sbjct: 221 QEVQFEKFRQELTNPSVSANVAHMNSKSNSPNQEGESQESGTEHYYANANRGRGRGKGRG 280

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQF 766
                   + TS      CQ+CGK  H   +CWH++
Sbjct: 281 RGRGKAQIAPTS--GKVQCQICGKSNHDAANCWHRY 314


>gb|PNX63176.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 273

 Score =  132 bits (332), Expect = 4e-32
 Identities = 67/143 (46%), Positives = 98/143 (68%), Gaps = 1/143 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTL+ S+L R +  +H++QVWE+IH++F    K KIRQ             +I E+
Sbjct: 115 TWLLSTLAESVLPRTISCRHAFQVWEEIHNYFNAQTKAKIRQLRSELKTVKKGTKTITEF 174

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILMC-KSEISNLSELKSLLMI 478
           + R++ +AN+L +IG  VSEQD  D +LDGL EEYN FV++M  +S+  +L +++ LL++
Sbjct: 175 ILRVRAVANTLISIGDSVSEQDQIDSILDGLPEEYNPFVMMMYGRSDSPSLFDIEGLLLV 234

Query: 479 QESQFDKFKQELVVSNVIADVAH 547
           QESQ +KF+QEL V N  A+VAH
Sbjct: 235 QESQLEKFRQELAVPNASANVAH 257


>gb|PNX63257.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 247

 Score =  131 bits (330), Expect = 4e-32
 Identities = 65/143 (45%), Positives = 100/143 (69%), Gaps = 1/143 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTL+ S+L R +   H++QVWE+IH +F  HLK K+RQ             +I E+
Sbjct: 91  TWLLSTLAESVLPRTIGCCHAFQVWEQIHKYFNAHLKAKVRQLRSELKTIKKGTKTITEF 150

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILMC-KSEISNLSELKSLLMI 478
           V R++ +A++L ++G  V+EQD  D +LDGL EEYN FV+++  +S+  +L +++ LL++
Sbjct: 151 VLRVRAIADTLLSVGDSVTEQDQIDSILDGLPEEYNPFVMMIYGRSDSPSLYDIEGLLLV 210

Query: 479 QESQFDKFKQELVVSNVIADVAH 547
           QESQ +KF+QEL+V NV A++AH
Sbjct: 211 QESQLEKFRQELMVPNVSANIAH 233


>gb|PNX79340.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 589

 Score =  138 bits (347), Expect = 4e-32
 Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 2/224 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+ +L R+L  +HS++VWEKIH +F   LK++ RQ             S+NEY
Sbjct: 99  TWLLSTISDGVLPRVLSCKHSYEVWEKIHKYFNSVLKSRARQLRSELKNTKKHARSVNEY 158

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + R++++ NSL A+G  VSEQ+  D +L+GL EEYNSFV+++  + E   + ++++LL++
Sbjct: 159 LLRVKSIVNSLIAVGDNVSEQEQVDAILEGLPEEYNSFVMMIYSRFETPTVEDVEALLLL 218

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE QF+KF+QEL   +V A+VAH                     Y  N            
Sbjct: 219 QEVQFEKFRQELANPSVSANVAHTETHSNDPIVDTTTQESGTEHY--NVTANRGKGRGKG 276

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFD-ENFIPQ 787
                  T N+       CQ+C +  H    CW+++D  N  PQ
Sbjct: 277 RGRGRGRTQNSQNTGKVQCQICDRPNHDASICWYRYDPSNAKPQ 320


>gb|PNX90878.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 324

 Score =  132 bits (332), Expect = 1e-31
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 1/217 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+ +L R+L  +HS++VWEKIH +F   LK++ RQ             ++NEY
Sbjct: 100 TWLLSTISDGVLPRVLSCKHSYEVWEKIHTYFNSVLKSRARQLRSELKNTKKHSRTVNEY 159

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL AIG  VSE++  D +L+GL EE+N FV+++  +S+   + ++++LL++
Sbjct: 160 LLRIKSIVNSLIAIGDVVSEREQVDAILEGLSEEFNPFVMMVYSRSDTPKVEDVEALLLL 219

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QESQF+KF+QEL   +V A+VA +                    Y  N            
Sbjct: 220 QESQFEKFRQELANPSVSANVAQIESKDSNHNSDSEGQDSGTEHY--NVKTHRGRGRNKG 277

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFD 769
                  T NT       CQ+C +  H    CW+++D
Sbjct: 278 RGRSRGKTPNTGR---VQCQICSRKNHDASICWYRYD 311


>gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1438

 Score =  138 bits (347), Expect(2) = 1e-31
 Identities = 77/228 (33%), Positives = 124/228 (54%), Gaps = 1/228 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+++L R+L  +H+ +VW++IH +F   LK++ RQ             S++EY
Sbjct: 101 TWLLSTISDAVLPRVLNCKHAHEVWDQIHKYFNSVLKSRSRQLRSELKNTKKMARSVSEY 160

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+G  VSEQ+  D +L+GL E++NSFV+++  + E   + ++++LL++
Sbjct: 161 LLRIKSIVNSLVAVGDVVSEQEQVDAILEGLPEDFNSFVMMIYSRFETPTVEDVEALLLL 220

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE QF+KF+QEL    V A+VA +                    Y  N            
Sbjct: 221 QEVQFEKFRQELANPKVSANVAQVQSNFNDEERDTETQESGTEHY--NASANRGRGRGKG 278

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQEAQNN 802
                  T NT       CQ+CGK  H  ++CWH+++    PQ A+ N
Sbjct: 279 RGRGRGRTQNTQNSGKVQCQICGKANHEALNCWHRYEP---PQSARPN 323



 Score = 28.5 bits (62), Expect(2) = 1e-31
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 21  HLEVPRQIDLDENRLNGINSIAYD*WLVQDQMI 119
           H ++P Q     +RL+G NS  Y  WL +DQ +
Sbjct: 67  HPQIPLQFASVADRLDGKNSDEYQQWLFKDQSL 99


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  137 bits (346), Expect = 2e-31
 Identities = 76/226 (33%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTLS+ +L R+L  +H+ +VW+KIH +F   LK++ RQ             S+NEY
Sbjct: 66  TWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNSVLKSRARQLRSELKNTKKLSRSVNEY 125

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+G  VSEQ+  D +L+GL EE+NSFV+++  + +   + ++++LL++
Sbjct: 126 LLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLL 185

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE+QF+KFKQEL   +V A+VAH                     Y  N            
Sbjct: 186 QEAQFEKFKQELTSPSVSANVAHTETNASDSNSEHESQELGTEHYNVNANRGRGRGKGRG 245

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQEAQ 796
                    N        CQ+C K  H  ++CW+++D   + Q ++
Sbjct: 246 RGRGKGQAQNQGK---VKCQICAKPNHDAINCWYRYDPQAMNQNSR 288


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  137 bits (346), Expect = 2e-31
 Identities = 76/226 (33%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLSTLS+ +L R+L  +H+ +VW+KIH +F   LK++ RQ             S+NEY
Sbjct: 66  TWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNSVLKSRARQLRSELKNTKKLSRSVNEY 125

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+G  VSEQ+  D +L+GL EE+NSFV+++  + +   + ++++LL++
Sbjct: 126 LLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLL 185

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE+QF+KFKQEL   +V A+VAH                     Y  N            
Sbjct: 186 QEAQFEKFKQELTSPSVSANVAHTETNASDSNSEHESQELGTEHYNVNANRGRGRGKGRG 245

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQEAQ 796
                    N        CQ+C K  H  ++CW+++D   + Q ++
Sbjct: 246 RGRGKGQAQNQGK---VKCQICAKPNHDAINCWYRYDPQAMNQNSR 288


>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
          Length = 1432

 Score =  137 bits (345), Expect = 2e-31
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 1/217 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+S+L R+L  +HS +VW+KIH +F   LK++IRQ             S++EY
Sbjct: 102 TWLLSTISDSVLPRVLHCKHSHEVWDKIHKYFNSVLKSRIRQLRSELKNTKKLARSVSEY 161

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+G  +SEQ+  D +LDGL EE+NSFV+++  + +   + +++ LLM+
Sbjct: 162 LLRIKSIINSLIAMGESISEQEQIDAILDGLSEEFNSFVMMVYSRFDNPTVEDVEGLLML 221

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE+QFDKF+QEL   +V A+VA +                 +  Y   F           
Sbjct: 222 QEAQFDKFRQELTNPSVSANVAQMDSKNQHPNQEVEDTESGNEHY--TFNTYRGKGRGRG 279

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFD 769
                    N        CQ+C K  H   +CW++++
Sbjct: 280 KAKARGKAPNALNNGKVQCQICSKSNHDAANCWYRYE 316


>gb|PNX89792.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 403

 Score =  132 bits (333), Expect = 4e-31
 Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 1/217 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+++L R+L  +HS  VW+KIH +F   LK++ RQ             S+NEY
Sbjct: 102 TWLLSTISDAVLPRVLHCKHSHXVWDKIHKYFNSVLKSRTRQLRSELKNTKKLARSVNEY 161

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+G  VSEQ+  D +L+GL EE+NSFV+++  + E   + ++++LL++
Sbjct: 162 LLRIKSIVNSLIAVGDTVSEQEQVDAILEGLPEEFNSFVMMVYSRFESPTVEDVEALLLL 221

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE QF+KF+QEL   +V A++AH                     Y  N            
Sbjct: 222 QEVQFEKFRQELTNPSVSANIAHKESKNSNSSDDADEQEIGTEHY--NVNVSRGRGRGKG 279

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFD 769
                      S      CQ+C K  H   +CWH+++
Sbjct: 280 RGRGRGKAQFKSNSKKVQCQICAKPNHDAANCWHRYE 316


>gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan]
          Length = 221

 Score =  128 bits (321), Expect = 4e-31
 Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 2/216 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHS-INE 298
           +WLLS+LS  +L R+L  +HS+++W+KIH H+Y HL  K RQ               I+E
Sbjct: 4   SWLLSSLSEPVLPRVLGCKHSYEIWDKIHKHYYSHLHAKKRQLRSELKSSKIGPSQPISE 63

Query: 299 YVTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILMC-KSEISNLSELKSLLM 475
           Y+ RI+ + NSL A+G  V+ QD  D +LDGL E+YNSFV+++  +S+  ++++++SLL+
Sbjct: 64  YILRIRAIINSLIAVGELVTNQDQIDTILDGLPEDYNSFVMMIYGRSDSISVTDVESLLL 123

Query: 476 IQESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXX 655
           +QE+Q +K++Q+L   +V  +                       ++ N            
Sbjct: 124 VQEAQLEKYRQDLTSPSVSVNAVQGPQDSHFQSQSQFVSNRGGFQFSNR-------GGRY 176

Query: 656 XXXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQ 763
                     N   G  PTCQLC KYG+    CW++
Sbjct: 177 CGGRYRGRGRNRGGGQRPTCQLCYKYGYDAFHCWNR 212


>gb|PNY18109.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1239

 Score =  136 bits (343), Expect = 4e-31
 Identities = 77/229 (33%), Positives = 123/229 (53%), Gaps = 1/229 (0%)
 Frame = +2

Query: 122 TWLLSTLSNSMLSRLLFYQHSWQVWEKIHHHFYVHLKTKIRQXXXXXXXXXXXXHSINEY 301
           TWLLST+S+ +L R+L  +H+++VW+KIH +F   LK++ RQ             S+NEY
Sbjct: 99  TWLLSTISDGVLPRVLSCRHAYEVWDKIHKYFNSVLKSRARQLRSELKNTKKNSRSVNEY 158

Query: 302 VTRIQTLANSLTAIGVFVSEQDLCDIVLDGLLEEYNSFVILM-CKSEISNLSELKSLLMI 478
           + RI+++ NSL A+G  V+EQ+  D +L+GL EE+NSFV+++  + +   + ++++LL++
Sbjct: 159 LLRIKSIVNSLVAVGDIVTEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLL 218

Query: 479 QESQFDKFKQELVVSNVIADVAHLXXXXXXXXXXXXXXXXXHARYGNNFXXXXXXXXXXX 658
           QE QF+KFKQEL   +V A++AH                     Y  N            
Sbjct: 219 QEVQFEKFKQELTNPSVSANIAHTAAHTSDSTSETESQEIGTEHY--NAMPHRGRGRGRG 276

Query: 659 XXXXXXXTSNTSTGNLPTCQLCGKYGHFVMDCWHQFDENFIPQEAQNNT 805
                      S     TCQ+C K  H  ++CW+++D    PQ  + NT
Sbjct: 277 RGGRGRGKGPASGQGKVTCQICSKPNHDAINCWYRYD----PQAMRPNT 321