BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00017577
         (1849 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU50434.1| hypothetical protein TSUD_134890, partial [Trifo...   367   e-114
dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subt...   358   e-112
gb|PNX83328.1| ribonuclease H, partial [Trifolium pratense]           356   e-112
ref|XP_019418409.1| PREDICTED: uncharacterized protein LOC109329...   364   e-111
dbj|GAU23240.1| hypothetical protein TSUD_172690 [Trifolium subt...   368   e-110
dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subt...   374   e-110
gb|PNX79011.1| ribonuclease H, partial [Trifolium pratense]           348   e-109
gb|PNX72376.1| ribonuclease H, partial [Trifolium pratense]           357   e-109
gb|PNX99941.1| cysteine-rich receptor-like protein kinase, parti...   359   e-108
gb|PNY11621.1| cysteine-rich receptor-like protein kinase, parti...   358   e-108
dbj|GAU27776.1| hypothetical protein TSUD_215870 [Trifolium subt...   350   e-108
gb|PNY15032.1| ribonuclease H, partial [Trifolium pratense]           364   e-107
gb|PNX95738.1| ribonuclease H, partial [Trifolium pratense]           361   e-107
dbj|GAU46725.1| hypothetical protein TSUD_100170 [Trifolium subt...   348   e-106
dbj|GAU36827.1| hypothetical protein TSUD_320640 [Trifolium subt...   348   e-106
dbj|GAU18134.1| hypothetical protein TSUD_248350 [Trifolium subt...   345   e-106
gb|KYP40876.1| Putative ribonuclease H protein At1g65750 family ...   346   e-106
dbj|GAU43110.1| hypothetical protein TSUD_373050 [Trifolium subt...   354   e-106
gb|KYP50779.1| Transposon TX1 uncharacterized [Cajanus cajan]         352   e-105
gb|KYP34591.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]   345   e-105

>dbj|GAU50434.1| hypothetical protein TSUD_134890, partial [Trifolium subterraneum]
          Length = 712

 Score =  367 bits (943), Expect = e-114
 Identities = 197/495 (39%), Positives = 279/495 (56%), Gaps = 8/495 (1%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            RMGF  +W  WM+ACI   S+ VLVNGSP  +F +EKGLR+GDPL+PFLFLIIAE L  L
Sbjct: 164  RMGFAPRWLKWMRACIFNSSMPVLVNGSPMEDFVVEKGLRQGDPLSPFLFLIIAERLTRL 223

Query: 504  FTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVN 683
              K V+ G++    +        LQ+ADDT+++ +   ENLW LK VLR FE VSGLKVN
Sbjct: 224  MQKAVDNGNYHGFKVRDDLQFHTLQFADDTVLVGEGNWENLWSLKTVLRSFELVSGLKVN 283

Query: 684  FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRL 863
            F KS L G+N+ ++ L+ A+ FL+C++ S+P  FLGIPVGANPR   TW PV++ ++ RL
Sbjct: 284  FFKSKLYGINLDDNFLSAASSFLHCEVDSIPFRFLGIPVGANPRRKITWNPVVEAMKKRL 343

Query: 864  STWRSRQLSMGEGLH*LIRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GVGRKMAWIR 1043
            + W  R LS+G             R T  +S             C+ I     +K+ W+ 
Sbjct: 344  NAWNCRNLSIG------------GRVTLINS----HPKEVSWGGCSDI-----KKICWVS 382

Query: 1044 WSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYG--PEGVLN-- 1211
            W  ICLPK+ GGLGI+N+  FN +LL KWKWR L D +++W  L+   YG   +  L   
Sbjct: 383  WDTICLPKDKGGLGIKNLNCFNQALLCKWKWRGLCDHNTLWTKLLEHRYGSLADNFLRDT 442

Query: 1212 ----RGQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCFKEVF 1379
                +GQ S+WW+DI  +      A  WF+ +VR  LG G  +RFW ++W G  C K++F
Sbjct: 443  TRDVKGQ-SLWWRDIMMIGGIENDA--WFRFNVRNVLGNGTCIRFWHETWHGPVCLKDLF 499

Query: 1380 LNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQLEADVD 1559
              L+  S +   ++ + G+W N +W WNL W+ +              +L  IQ   +  
Sbjct: 500  PQLYCKSPQAEAIIYDVGKWVNQQWVWNLQWSTNLTSTEHDAACELANLLTGIQPSLECA 559

Query: 1560 DRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKFMVHAWRVLM 1739
            DR  W L  +  + V S Y+    +     I+++    L+ LW  D PSK  +  WR+L+
Sbjct: 560  DRRRWGLTQTGMFSVKSTYEFLQSREVVVAIEDNVVKALQLLWLNDVPSKVSIFGWRLLL 619

Query: 1740 DSLPTRLALQNRGVI 1784
              LPTR+AL  + +I
Sbjct: 620  SRLPTRMALARKNII 634


>dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subterraneum]
          Length = 596

 Score =  358 bits (918), Expect = e-112
 Identities = 186/510 (36%), Positives = 277/510 (54%), Gaps = 12/510 (2%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            +MGF E W  WM+ CIC  S+SVLVNGS T +F + KGLR+GDPL+PFLFLI+AEGL G+
Sbjct: 36   KMGFAEGWLKWMRTCICQSSMSVLVNGSSTKDFNVFKGLRQGDPLSPFLFLIVAEGLTGM 95

Query: 504  FTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVN 683
              + VE+G F+   +       +LQ+ADD +++ +N+ +NLW +K VLR FE VSGLK+N
Sbjct: 96   VRRAVELGKFKGYKVSESIQFQILQFADDMILMGENSWDNLWTIKTVLRGFEMVSGLKIN 155

Query: 684  FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRL 863
            F+KS L G+NV ED L   + FL C+   +P  FLGIPVGANPR   TW PV++ +  R 
Sbjct: 156  FNKSKLYGINVEEDFLEAGSTFLSCRSDVIPFKFLGIPVGANPRRKETWRPVVEAMSTRF 215

Query: 864  STWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*G--VGRKM 1031
            S W    L+ G  +  +  +  S    + +F                N +  G    +KM
Sbjct: 216  SRWSGSHLTYGGRITLINSVLASLPLYFFSFFKASICVLNQLVSIQRNFLWGGGLEEKKM 275

Query: 1032 AWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGP----- 1196
             W++W  +CLP++ GGLG++N++LFNI+LL KWKWR ++D ++VW  ++R  YG      
Sbjct: 276  CWVKWDHVCLPRDLGGLGVKNLKLFNIALLSKWKWRCVNDSEAVWKEVLRHRYGHLSSFI 335

Query: 1197 -EGVLNRGQF--SVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCF 1367
              GV     F  S+WWKD+ ++ +   F   WF+ + RI +G GN + FW + W G    
Sbjct: 336  LNGVPISSNFKTSIWWKDMVNIGE--TFGYDWFQSNTRIIVGNGNNIAFWTNRWLGNNVL 393

Query: 1368 KEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQLE 1547
             ++F NLF+    +   V +    +N+   W   W                 +L    L 
Sbjct: 394  SDLFPNLFDKEAFKDAKVADRVINNNDGTIWRWEWRGRLTEAEELDLAELQVLLTGFSLN 453

Query: 1548 ADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKFMVHAW 1727
                DRW W+ D+   + + S Y   I   +   +       ++ LW  D PSK  +  W
Sbjct: 454  PTCCDRWKWIPDSVGDFTIKSCYNVLIHVGNTVVLSPHLLVAIRKLWKNDLPSKVGIFGW 513

Query: 1728 RVLMDSLPTRLALQNRGVIDFNPGTRALMC 1817
            R+L++ LPTR AL +R +++ +     + C
Sbjct: 514  RLLLEKLPTRAALAHRNILNTDDELLCVFC 543


>gb|PNX83328.1| ribonuclease H, partial [Trifolium pratense]
          Length = 573

 Score =  356 bits (914), Expect = e-112
 Identities = 187/503 (37%), Positives = 285/503 (56%), Gaps = 16/503 (3%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            +MGF  KW  WM+ACI   ++SVLVNGSPT +F + KGLR+GDPL+PFLFLI AEGL G+
Sbjct: 50   KMGFARKWMCWMRACIFNSTMSVLVNGSPTEDFNVGKGLRQGDPLSPFLFLIAAEGLAGM 109

Query: 504  FTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVN 683
              K V++G F    +++     +LQ+ADDT+++ + + +N+  +K +LR FE VSGLK+N
Sbjct: 110  VNKAVDIGKFAGFKVDNSICFKILQFADDTILLGEASWDNVKTIKTILRGFELVSGLKIN 169

Query: 684  FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRL 863
            F KS L G+NV ++ +  A  FL C   S+P  FLGIPVGANPR   +W P+++ L  RL
Sbjct: 170  FVKSKLYGINVDDNFIAAAASFLNCSFDSIPFKFLGIPVGANPRRQESWQPIVESLTKRL 229

Query: 864  STWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*G--VGRKM 1031
            S+W  R LS+G  +  +  +  S    + +F+               N +  G    +K+
Sbjct: 230  SSWSGRNLSIGGRVTLINSVLSSLPLYFFSFYKAPRCIINKLVRIQRNFLWGGGLEDKKL 289

Query: 1032 AWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGP----- 1196
             WI+W ++CLPK+ GGLG++++ELFN +LL KWKWR L+++D++W  L+   YG      
Sbjct: 290  CWIKWEQVCLPKDKGGLGVKDLELFNTALLCKWKWRYLNEKDALWYELLCYRYGSPSSNF 349

Query: 1197 ---EGVLNRGQFSVWWKDINSL----DDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCG 1355
               E V    + S+WW+D+  +    +DC      WF   V   LG G  + FW++ W G
Sbjct: 350  LSREAVTTSNKDSLWWRDVVGVGGKDNDC------WFPLQVSSILGNGASICFWKEKWFG 403

Query: 1356 QWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVP 1535
                +++F +LF+    +   V++     ++   WN  W ++              +L  
Sbjct: 404  AAPLRDLFPHLFDKEMFKDRTVSDLIHVGSSVVHWNSDWVDTLSQEEAVERADLEQLLTG 463

Query: 1536 IQLEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKFM 1715
            + L AD +DRW W+L+ S  + V SVY     + D   ++    + L  LW  D PSK  
Sbjct: 464  LDLHADREDRWRWMLNDSGLFSVKSVYTFLQSRLDSLNLEPQLLHALHKLWKNDVPSKVG 523

Query: 1716 VHAWRVLMDSLPTRLALQNRGVI 1784
            V  WR+L++ LPTR AL ++ V+
Sbjct: 524  VFGWRLLLERLPTRAALASKVVL 546


>ref|XP_019418409.1| PREDICTED: uncharacterized protein LOC109329191 [Lupinus
            angustifolius]
          Length = 953

 Score =  364 bits (934), Expect = e-111
 Identities = 195/514 (37%), Positives = 279/514 (54%), Gaps = 16/514 (3%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            RMGF  KWR W+K+C+   S S+LVNGSPTSEF M +GLR+GDP+APFLFLI+AEGL G+
Sbjct: 315  RMGFCFKWRNWIKSCLQSNSFSILVNGSPTSEFRMARGLRQGDPIAPFLFLIVAEGLGGI 374

Query: 504  FTKCVEVGSFEVLNIESGSS-LPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKV 680
                V    F   ++      +  LQYADDTL+I +N+++N+  LK++L+ FE VSGLK+
Sbjct: 375  MRSAVSKKIFTGYSVGRDEIVISHLQYADDTLLIGENSADNIMVLKSILKCFELVSGLKI 434

Query: 681  NFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDR 860
            NFHKS  +G+      + VA   L C +GS+P  FLGIPVGANP+  STW  VI   + +
Sbjct: 435  NFHKSSFIGIKADPSFVQVAVNRLLCGVGSIPFKFLGIPVGANPKRLSTWSLVIDTFKRK 494

Query: 861  LSTWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGI--S*GVGRK 1028
            LS W+ + LS G  +  L  +  S    Y +F                  +     V + 
Sbjct: 495  LSRWQQKLLSFGGRVTLLKSVLSSLPIYYFSFFKAPVSIIHELERIQRRFLWGRGEVNKG 554

Query: 1029 MAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGPEGVL 1208
            + W+RW ++C  KE GGLG++N+ LFN++LLGKW+W +LS  +S+W  ++R +YG E V+
Sbjct: 555  IHWVRWKEVCRSKEEGGLGVKNLGLFNLALLGKWRWHMLSSSESLWVKVLRSIYGVEAVV 614

Query: 1209 NRGQFSV--------WWKDINSLDDCLQ---FAKGWFKDSVRIKLGCGNEVRFWQDSWCG 1355
              G   V        WW+D+  L  C +   F KGWF + VR ++G G    FW+D W G
Sbjct: 615  RGGLVDVECFKKGSSWWRDLGCL--CNRDNGFNKGWFNEGVRRRVGSGQSTLFWRDIWVG 672

Query: 1356 QWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVP 1535
              C K  F  LF ++  +   ++  GEW N  W W L W  S               +  
Sbjct: 673  GECLKNCFERLFQVTLNKDACISSMGEWRNGVWCWLLNWRRSLFLWEQDEVNDLLNKVEE 732

Query: 1536 IQLEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKFM 1715
            ++L    +D W+W+ D + +Y V + YK       +  +  D     K LW++  PSK  
Sbjct: 733  VRLVQGNEDGWLWVHDKNGTYSVRNAYKVL-----QNEVRNDNYLHYKRLWASKVPSKLK 787

Query: 1716 VHAWRVLMDSLPTRLALQNRGVIDFNPGTRALMC 1817
              AWR+ +  +PT + L  RG+I   P T    C
Sbjct: 788  CFAWRLFVGGVPTWMNLARRGIIGSLPSTLCAFC 821


>dbj|GAU23240.1| hypothetical protein TSUD_172690 [Trifolium subterraneum]
          Length = 1185

 Score =  368 bits (945), Expect = e-110
 Identities = 194/502 (38%), Positives = 289/502 (57%), Gaps = 15/502 (2%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            R  FN KWR WMKAC+C G++S+LVNGSPT E  +++GL++GDPLAP LFLI+AEGL  L
Sbjct: 565  RFSFNIKWRKWMKACVCSGNMSILVNGSPTEEINIKRGLKQGDPLAPLLFLIVAEGLGAL 624

Query: 504  FTKCVEVGSFEVLNI-ESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKV 680
                V  G F+   +  SG  + +LQYADDTL I + + +NLW +KA+LR FE VSGLKV
Sbjct: 625  MRMAVAKGRFKPFLVGRSGMPISMLQYADDTLCIGEASIDNLWAVKAILRGFEMVSGLKV 684

Query: 681  NFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDR 860
            NF KS L+G+NV  D L++A+RFL C++G +P  +LG+ VGANP + STW P+++ L+ R
Sbjct: 685  NFWKSFLLGVNVTNDFLHMASRFLNCRIGRLPFTYLGLSVGANPHVFSTWAPMLEALKRR 744

Query: 861  LSTWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GVG--RK 1028
            L  W +R +S+G  +  +  +  S    + ++                N +  G+   R+
Sbjct: 745  LGAWGNRYISLGGRIVLINAVINSIPIFFLSYLKMPVKVWREVVRVQRNFLWGGLSKKRR 804

Query: 1029 MAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGPEGVL 1208
            + W++WS IC  K+ GGLGI+++ L N+SLL KW+W+LL +   VW  ++   YG EGVL
Sbjct: 805  INWVKWSDICKTKKDGGLGIKDLRLVNLSLLAKWRWKLLMEGGDVWKNVLVAKYG-EGVL 863

Query: 1209 NRGQF---------SVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQW 1361
               +          SVWW D+  LD       GWF      K+GCGN ++FW+D W G  
Sbjct: 864  GNTRLDSMSLGNGCSVWWTDLCRLDR----GAGWFNQVAIKKMGCGNTIKFWKDVWVGNQ 919

Query: 1362 CFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQ 1541
              +  F  L+++SD+Q  LV E G   N  WRW L W  +              ++  + 
Sbjct: 920  SLEHRFPRLYSISDQQDKLVQEVGSRINGMWRWGLMWRRNFFVWEEDLLNELEEVIKNVV 979

Query: 1542 LEADVDDRWVWLLDASSSYKVNSVYKT-PIPKSDEYTIDEDKTNILKSLWSTDAPSKFMV 1718
            +  +V D WVW  +    + V S+Y T  +       +   ++++ K++W +  PSK   
Sbjct: 980  I-TEVGDSWVWSPNVDEGFSVKSLYLTLDVMLLSHNNLTTFQSSVFKNIWKSVVPSKVSA 1038

Query: 1719 HAWRVLMDSLPTRLALQNRGVI 1784
             AW++ +D +PT++ L  RG+I
Sbjct: 1039 LAWQLFLDRIPTKVNLARRGII 1060



 Score = 79.3 bits (194), Expect = 2e-11
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1   RRKRILWSSLIAEKARLAPGSWVIGGDFNTVTNRSDRKGRSIRFSNAESQN---FKHFMV 171
           R KR LW  L+  K+    G W + GDFN+V    +R+G     +   S     F  F+ 
Sbjct: 124 RDKRRLWGDLLMSKSGFGDGLWCVLGDFNSVRASLERRGAGQIVAGGHSSEMLAFDLFLN 183

Query: 172 EMEVVEPPCLGKRYSWYQPNGPTASRIDRIILSPDLIDLWKVRAQWI 312
            + +V+ P +G+ ++W+ PNG   SR+DRI++SPD  D+W     W+
Sbjct: 184 NLGLVDLPIIGRSFTWFHPNGVAMSRLDRILVSPDWFDIWGSPNVWV 230


>dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subterraneum]
          Length = 1985

 Score =  374 bits (961), Expect = e-110
 Identities = 196/502 (39%), Positives = 290/502 (57%), Gaps = 15/502 (2%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            R GF  KWR WM+AC+C G++SVLVNGSPT E  + +GL++GDPLAP LFLI+AEGL  L
Sbjct: 1356 RFGFGTKWRNWMRACVCAGNMSVLVNGSPTEEISIRRGLKQGDPLAPLLFLIVAEGLGAL 1415

Query: 504  FTKCVEVGSFEVLNIESGSSLPV--LQYADDTLIICKNTSENLWCLKAVLRIFETVSGLK 677
                VE G F+   +  G+ LPV  LQYADDTL I + T+ENLW LKA+LR FE  SGLK
Sbjct: 1416 MRSAVERGRFKPFVVGRGA-LPVSILQYADDTLCIGEATTENLWALKAMLRGFELASGLK 1474

Query: 678  VNFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRD 857
            VNF KSC++G+NV +D L  A+ FL C++G +P  +LG+PVGANPR  STW P+++ ++ 
Sbjct: 1475 VNFWKSCIMGVNVSQDFLLAASGFLNCRIGCLPFMYLGLPVGANPRRYSTWQPMVEGIKR 1534

Query: 858  RLSTWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GVG--R 1025
            RL +W ++ +S+G  +  +  +  S    + ++                N +  G+   R
Sbjct: 1535 RLRSWGNKYISLGGRIVMINAVLSSIPIFFLSYMKMPLMVWKEIVTLQRNFLWGGLSKRR 1594

Query: 1026 KMAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGPEGV 1205
            ++ W++W++IC PK+ GGL IR++   N+SLL KW+W+LLS+ + VW  ++   YG   +
Sbjct: 1595 RICWVKWAEICKPKKEGGLSIRDLRTVNLSLLAKWRWKLLSEEEEVWKNVIIAKYGIHML 1654

Query: 1206 LNR--------GQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQW 1361
             N            S+WW+D+  LD       GWF    R  LGCGN ++FW++ W G  
Sbjct: 1655 GNARLDERDIGSMSSLWWRDLCRLDK----GVGWFNHFARKYLGCGNSIKFWKEVWVGGQ 1710

Query: 1362 CFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQ 1541
              +  F  LF +S +Q  +V E G W N  WRW L W                 +L  I 
Sbjct: 1711 SLELQFPRLFGISVQQDDMVREVGSWVNGVWRWGLRWRRVLFVWEEDLVSELELVLNNIS 1770

Query: 1542 LEADVDDRWVWLLDASSSYKVNSVYKTPIP-KSDEYTIDEDKTNILKSLWSTDAPSKFMV 1718
            +  + +DRWVW L+    + V S+Y+   P  +    +   ++   +S+W +  PSK   
Sbjct: 1771 I-TEEEDRWVWRLNVGDGFTVKSLYEALDPLLTPRCLVSSFESFAYRSIWKSAVPSKVSA 1829

Query: 1719 HAWRVLMDSLPTRLALQNRGVI 1784
             AW++ +D +PT++ L  RG++
Sbjct: 1830 LAWQLFLDRIPTKVNLYKRGIL 1851



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 37/110 (33%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1    RRKRILWSSLIAEKARLAPGSWVIGGDFNTVTNRSDRKGRSIRFSNAESQN---FKHFMV 171
            R KR LW++++  K+    G W + GDFN+V + ++R+G         S     F  F+ 
Sbjct: 867  RNKRTLWANILMSKSGFGEGLWCVLGDFNSVRDSNERRGVVGNVDGQRSSEMVAFDLFLN 926

Query: 172  EMEVVEPPCLGKRYSWYQPNGPTASRIDRIILSPDLIDLWKVRAQWIGNR 321
             +++V+ P +G+R++W+ PNG + SR+DRI++S D  D+W     W  +R
Sbjct: 927  NLDLVDMPLIGRRFTWFHPNGVSMSRLDRILISSDWADVWGTPNVWAMDR 976


>gb|PNX79011.1| ribonuclease H, partial [Trifolium pratense]
          Length = 497

 Score =  348 bits (892), Expect = e-109
 Identities = 187/501 (37%), Positives = 273/501 (54%), Gaps = 17/501 (3%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            +M F E W  WM+AC+   S+SVLVNGSPT +F + KGLR+GDPL+PFLFLI AEGL G+
Sbjct: 4    KMWFTEGWIRWMRACVFKSSMSVLVNGSPTDDFKVSKGLRQGDPLSPFLFLIAAEGLTGM 63

Query: 504  FTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVN 683
              K V +G F    +    S  +LQ+ADDT+++ + T EN+W +K +LR FE VSG+K+N
Sbjct: 64   VKKAVNIGKFRGFKVHDDLSFHILQFADDTIMMGEGTWENVWTIKTILRGFELVSGMKIN 123

Query: 684  FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRL 863
            F KS L G+NV E  L   + FL C+  S+P  FLG+PVGANPR   TW PV++ +  RL
Sbjct: 124  FVKSKLYGINVEESFLEATSNFLLCRAESIPFKFLGLPVGANPRRLETWKPVVESMMRRL 183

Query: 864  STWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*G--VGRKM 1031
            S W  R LS+G  +  +  +  S    + +F                N +  G    +K+
Sbjct: 184  SGWNGRHLSIGGRVMLINSVLSSLPLYFYSFFRAPKGIIRKLVKLQRNFLWGGGLEDKKL 243

Query: 1032 AWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGPE---- 1199
             W++W  +CLPKE GGLG++ ++LFN +LL KWKWR +++ D++W  L++  Y       
Sbjct: 244  CWVKWEHVCLPKEKGGLGVKTLDLFNQALLSKWKWRCVNEPDALWTDLLKFRYEVSFDNL 303

Query: 1200 ---GVLNRGQF-SVWWKDI----NSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCG 1355
                 +  G F S+WW+D+    ++ DDC      WF  +V   LG G  + FW++ W G
Sbjct: 304  LSWETIKTGTFDSIWWRDVARVGDTADDC------WFPKNVSCGLGDGKSISFWKEKWIG 357

Query: 1356 QWCFKEVFLNLFNLS-DKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILV 1532
            +    E++ NLF +   K   + + F +  +N+  WNL W+                +L 
Sbjct: 358  EVPLMELYPNLFAIECFKNVVVADRFPDNGHNQ-EWNLFWSMDLSEFEMKEVEELQILLN 416

Query: 1533 PIQLEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKF 1712
             I L  DV D+W W+     ++ V S Y     +     I       L  LW  D PSK 
Sbjct: 417  GIMLTGDVGDKWRWIPGEEGNFSVKSTYMLLQNERAAMNIQTQLLEALHKLWKNDIPSKV 476

Query: 1713 MVHAWRVLMDSLPTRLALQNR 1775
             V  WR+L+  LPTR++L ++
Sbjct: 477  GVFGWRLLLMKLPTRVSLASK 497


>gb|PNX72376.1| ribonuclease H, partial [Trifolium pratense]
          Length = 852

 Score =  357 bits (915), Expect = e-109
 Identities = 204/528 (38%), Positives = 290/528 (54%), Gaps = 33/528 (6%)
 Frame = +3

Query: 300  GTMDW**GRMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLI 479
            G +D+   R GF EKWR WMKAC+C G++SVLVNGSPT E  +++GL++GDPLAP LF++
Sbjct: 228  GFLDYMLRRFGFGEKWRAWMKACVCSGNMSVLVNGSPTEEINIKRGLKQGDPLAPLLFIL 287

Query: 480  IAEGLPGLFTKCVEVGSFEVLNIESGSSLPV--LQYADDTLIICKNTSENLWCLKAVLRI 653
            +AEGL  L    VE G F+   +  G  LPV  LQYADDTL I + + +NLW LKA+LR 
Sbjct: 288  VAEGLGALMRMAVERGRFKPFLVGRG-GLPVSMLQYADDTLCIGEASVDNLWALKAILRG 346

Query: 654  FETVSGLKVN--------------FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLG 791
            FE  SGLKVN              F KSCLVGLNV  + LN+A+ FL C+ G  P  +LG
Sbjct: 347  FEMASGLKVNFWKSCLVGLNVSNEFXKSCLVGLNVSNEFLNMASGFLNCRRGQTPFKYLG 406

Query: 792  IPVGANPRLSSTWLPVIKKLRDRLSTWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXX 965
            +PVGANP+LSSTW  ++  ++ RL TW ++ +S+G  +  +  +  S    + ++     
Sbjct: 407  LPVGANPKLSSTWAVMVDGIKRRLGTWGNKYISLGGRIVLINAVLNSIPVFFLSYLKMPV 466

Query: 966  XXXXXXXXXXCNGIS*GVG--RKMAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWR 1139
                       N +  G+   RK+ W++W+ IC PK+ GGLGIR++ + NISLL KW+W+
Sbjct: 467  KVWREVVKIQRNFLWGGLSKYRKICWVKWADICRPKKEGGLGIRDLRVMNISLLAKWRWK 526

Query: 1140 LLSDRDSVWGGLMRQLYGPEGV---------LNRGQFSVWWKDINSLDDCLQFAKGWFKD 1292
            LLS+ D VW  ++   YG + V           RG  SVWW+DI  LD+      GWF  
Sbjct: 527  LLSEGDEVWKRVVVAKYGEDVVGKVCLDVEDFRRGA-SVWWRDICRLDN----GVGWFSQ 581

Query: 1293 SVRIKLGCGNEVRFWQDSWCGQWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGW 1472
                 +G GN  +FW+D W G    +  F  LF +S +Q  +V + G W +  W W L W
Sbjct: 582  VAIRNVGSGNNTKFWKDVWVGDQSLEIRFPRLFGISVQQDLVVRDVGRWVDGVWHWELLW 641

Query: 1473 TESXXXXXXXXXXXXXXILVPIQLEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTI 1652
              +              ++    +  + +D W W   +S  + V S+Y   +    E   
Sbjct: 642  RRNFFVWEEILVQQLLHLISQASI-TEAEDGWSWRPASSEGFSVKSLY---VFLDSELLH 697

Query: 1653 DEDKTNI----LKSLWSTDAPSKFMVHAWRVLMDSLPTRLALQNRGVI 1784
             E ++ I     K +W +  PSK    AW++ +D +PTR  L+ RGVI
Sbjct: 698  HEPRSPIEYFGFKHIWKSGVPSKVSAMAWQLFLDRIPTRNNLRLRGVI 745


>gb|PNX99941.1| cysteine-rich receptor-like protein kinase, partial [Trifolium
            pratense]
          Length = 1092

 Score =  359 bits (921), Expect = e-108
 Identities = 196/501 (39%), Positives = 280/501 (55%), Gaps = 18/501 (3%)
 Frame = +3

Query: 327  MGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGLF 506
            MGF+ +W  WM+ACI   S+S+LVNGSPT +F + +GLR+GDPL+PFLFLI+AEGL G+ 
Sbjct: 600  MGFSAEWMSWMRACIFESSMSILVNGSPTDDFKVGRGLRQGDPLSPFLFLIVAEGLAGMM 659

Query: 507  TKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVNF 686
             K V++G F+  +I +     +LQ+ADDT+I+ + + ENLW +K++LR FE VSGLK+NF
Sbjct: 660  NKAVDIGKFKGFSINANLQFQLLQFADDTIIMGEGSWENLWTIKSLLRGFELVSGLKINF 719

Query: 687  HKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRLS 866
             KS L G+NV    L     FL C   ++P  FLG+PVGANPR   TW PV++ L  RL+
Sbjct: 720  VKSKLYGVNVDTRLLEAGAVFLSCNTAAIPFKFLGLPVGANPRRRETWKPVVEALTKRLN 779

Query: 867  TWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*G--VGRKMA 1034
            +W SR LS G  L  +  +  S    + +F+               N    G    RK+ 
Sbjct: 780  SWNSRLLSFGGRLSLINSVLASIPLYFFSFYKAPRCVLNSLERIQRNFFWGGGLEERKLC 839

Query: 1035 WIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYG------- 1193
            WI+W ++CLPKE GGLG++N+E FN++LL KWKWR L+D D++W  L+R  YG       
Sbjct: 840  WIKWEQVCLPKEKGGLGVKNLEFFNLALLSKWKWRFLNDNDAIWAALLRFRYGKLSSSVL 899

Query: 1194 -PEGVLNRGQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCFK 1370
                +  R   S+WW+DI  +     F+ G F  ++  ++G G+ + FW   W G   F 
Sbjct: 900  TSRALGGRDLSSLWWRDI--IYKGRDFSDGGFSSNISCRVGNGDNIDFWNFKWFGSQAFY 957

Query: 1371 EVFLNLFNLSDKQFGLVNE----FGEWSNNRWRWN--LGWTESXXXXXXXXXXXXXXILV 1532
             +F +L+     +F  V+E     G  S   WRW+  L  TE               +L 
Sbjct: 958  SLFPDLYAKEVNKFATVSERLGREGAASLCSWRWSGLLNETEQ------QQLLELQGLLA 1011

Query: 1533 PIQLEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKF 1712
               L     DRW WL +++  + V S Y      S    ++ +++  L  LW +D PSK 
Sbjct: 1012 GFILSDTDSDRWWWLPESNGLFSVKSCYSFISSSSQVSLMEANESEALSRLWKSDVPSKI 1071

Query: 1713 MVHAWRVLMDSLPTRLALQNR 1775
             V  WR+L++ LPTRLAL  R
Sbjct: 1072 NVFGWRLLLNRLPTRLALHRR 1092



 Score = 88.6 bits (218), Expect = 2e-14
 Identities = 43/105 (40%), Positives = 60/105 (57%)
 Frame = +1

Query: 7   KRILWSSLIAEKARLAPGSWVIGGDFNTVTNRSDRKGRSIRFSNAESQNFKHFMVEMEVV 186
           KR LW  L+  KA    G W +GGDFN ++ R +R GR    S  E  +F  FM  MEVV
Sbjct: 116 KRKLWKDLLDFKANNVSGEWCLGGDFNAISKRGERTGRGYAGSLTERTDFNSFMEAMEVV 175

Query: 187 EPPCLGKRYSWYQPNGPTASRIDRIILSPDLIDLWKVRAQWIGNR 321
           + P LGK+++W + +    SR+DR +LS   I    +  QW+G+R
Sbjct: 176 DIPVLGKQFTWCKSDCTAMSRLDRFLLSDGFILKGGITNQWVGDR 220


>gb|PNY11621.1| cysteine-rich receptor-like protein kinase, partial [Trifolium
            pratense]
          Length = 1073

 Score =  358 bits (920), Expect = e-108
 Identities = 186/503 (36%), Positives = 280/503 (55%), Gaps = 16/503 (3%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            +MGF E+W  W++ACI   S+SVL+NGSPT +F + KGLR+GDPL+PFLFLI AEGL G+
Sbjct: 554  KMGFAERWMKWIRACIFNSSMSVLINGSPTEDFTVGKGLRQGDPLSPFLFLIAAEGLTGM 613

Query: 504  FTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVN 683
              K VE+G F    +       +LQ+ADDT+++ + + +N+  +K++LR FE VSGLKVN
Sbjct: 614  VNKAVEIGKFVGYKVNDSIRFQILQFADDTILLGECSWDNVRTMKSILRGFELVSGLKVN 673

Query: 684  FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRL 863
            F KS L G+NV  + L  A  FL C   ++P  FLGIPVGANPR  +TW P++  +  RL
Sbjct: 674  FVKSKLYGINVEANVLEAAATFLDCSYDTIPFKFLGIPVGANPRRKATWTPIVDSMTKRL 733

Query: 864  STWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GVG--RKM 1031
            S W  R LS+G  +  +  +  S    + +F+               N +  G    +K+
Sbjct: 734  SRWNGRNLSIGGRVTLINSVLSSLPLYFFSFYKAPIGIINQLVRIQRNFLWGGSAEVKKL 793

Query: 1032 AWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGP----- 1196
             W+ W+++CLPKE GGLG++N+E+FN +LL KWKWR L+D+D++W  L+   YGP     
Sbjct: 794  CWVSWAQVCLPKEKGGLGVKNIEMFNSALLCKWKWRCLNDKDAIWHALLMYRYGPLSIKL 853

Query: 1197 ---EGVLNRGQFSVWWKDI----NSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCG 1355
               + V+   + S+WW+D+       DDC      WF   V   LG G  + FW++ W G
Sbjct: 854  LSWDAVVTGSKDSLWWRDVVGIGGKYDDC------WFPSKVSSVLGNGKSIGFWKEKWYG 907

Query: 1356 QWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVP 1535
                +++F +LF     +  +V+E  +  +    WN  W  S              +L  
Sbjct: 908  AVPLRDLFPSLFEKVLHKDSVVSELIQADSFELNWNRDWLSSLSHAELVEKAELEQLLFG 967

Query: 1536 IQLEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKFM 1715
            + +  +++DRW W  D +  + V SVY     + +   I+ +    L  +W  D PSK  
Sbjct: 968  LTVHLNIEDRWRWNSDTTGLFSVKSVYNFLQSRLESNIIEPNVLAALHKMWKNDIPSKVG 1027

Query: 1716 VHAWRVLMDSLPTRLALQNRGVI 1784
            V  WR+L++ LPT+ AL ++  I
Sbjct: 1028 VFGWRLLIEKLPTKAALASKVAI 1050



 Score = 95.5 bits (236), Expect = 1e-16
 Identities = 45/105 (42%), Positives = 61/105 (58%)
 Frame = +1

Query: 7   KRILWSSLIAEKARLAPGSWVIGGDFNTVTNRSDRKGRSIRFSNAESQNFKHFMVEMEVV 186
           KR LWS L+  K     G W +GGDFN V    +RKG +  F   E   F  F+  ME++
Sbjct: 71  KRKLWSDLLDFKLNNEQGDWCLGGDFNAVMKAGERKGSTSSFRQNERLEFCQFVEAMELI 130

Query: 187 EPPCLGKRYSWYQPNGPTASRIDRIILSPDLIDLWKVRAQWIGNR 321
           + P  GK++SW+  +G   SR+DR +LS + ID  +V  QWIGNR
Sbjct: 131 DVPVAGKKFSWFSGDGNAMSRLDRFLLSENFIDKEEVSGQWIGNR 175


>dbj|GAU27776.1| hypothetical protein TSUD_215870 [Trifolium subterraneum]
          Length = 714

 Score =  350 bits (897), Expect = e-108
 Identities = 186/474 (39%), Positives = 264/474 (55%), Gaps = 12/474 (2%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            +MGF E W  WM+ACI   S+S+L+NGSPT +F + +GLR+GDPL+PFLFLI+ EGL G+
Sbjct: 221  KMGFTEGWLRWMRACIFEISMSILINGSPTEDFKVGRGLRQGDPLSPFLFLIVVEGLAGM 280

Query: 504  FTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVN 683
              + VE+G F+  ++       +LQ+ADDT+++  +T ENLW +K +LR FE VSG+++N
Sbjct: 281  MRRAVEIGRFKGFHVNDNLQFQMLQFADDTILMGNSTWENLWSIKVLLRGFELVSGMRIN 340

Query: 684  FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRL 863
            F KS L G+NV  + L   + FL C+   +P  FLGIPVGANPR   TW PV++ + +RL
Sbjct: 341  FVKSNLYGVNVDANFLEAGSSFLSCRSDVIPFKFLGIPVGANPRRRETWKPVVEAMTNRL 400

Query: 864  STWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*G--VGRKM 1031
            STW SRQLS G  +  +  +  S    + +F                N +  G  V +K+
Sbjct: 401  STWSSRQLSFGGRITLINTVLASMPLYFFSFFKAPVCILKLLVRIQRNFLWGGGLVEKKL 460

Query: 1032 AWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYG------ 1193
             WI+W +ICLPK  GGLG++N+ELFNI+LL KWKWRLL + D++W GL+R  YG      
Sbjct: 461  CWIKWDQICLPKNRGGLGVKNLELFNIALLSKWKWRLLDEGDTIWAGLLRFRYGHLSTKI 520

Query: 1194 --PEGVLNRGQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCF 1367
               E      + S+WW+DI S+   +     WF  +VR  +G GN + FW+  W G    
Sbjct: 521  LTGETSQIGAKDSIWWRDIMSIGKSINGL--WFNSNVRCCVGNGNNIGFWKFKWHGNTSL 578

Query: 1368 KEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQLE 1547
             ++F +LF     +  L++E   W+ N   WN  W E               +LV I+ +
Sbjct: 579  GDLFPDLFAKEAFKDVLISERLRWNGNTADWNWQWREELVETEEQQFSVLKDLLVGIRSD 638

Query: 1548 ADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSK 1709
                D W W+     ++ V S Y   I        D +    L  LW TD PSK
Sbjct: 639  PTRPDTWRWVPGTIGNFSVKSCYDVLISYYYLEAPDSNVLTALHKLWKTDVPSK 692


>gb|PNY15032.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1490

 Score =  364 bits (935), Expect = e-107
 Identities = 192/501 (38%), Positives = 279/501 (55%), Gaps = 14/501 (2%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            +MGF+E W  WM+ACI   S+SVLVNGSPT +F + +GLR+GDPL+PFLFLI+AEGL G+
Sbjct: 912  KMGFSEGWLNWMRACIFQSSMSVLVNGSPTEDFIIGRGLRQGDPLSPFLFLIVAEGLAGM 971

Query: 504  FTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVN 683
              K V +G F+   + +     +LQ+ADDT+I+ +++ EN+W +K++LR FE VSGLK+N
Sbjct: 972  MKKAVSIGKFKGFKVNANLHFELLQFADDTIIMGEDSWENIWAIKSLLRGFELVSGLKIN 1031

Query: 684  FHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRL 863
            F KS L G+NV    L     FL C   + P  FLGIPVGANPR   TW PV++ +  RL
Sbjct: 1032 FEKSKLYGVNVDSCFLKAGAAFLSCNTAATPFKFLGIPVGANPRRRETWNPVLEAMTKRL 1091

Query: 864  STWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*G--VGRKM 1031
            ++W SR LS G  L  +  +  S    + +F                N +  G    +K+
Sbjct: 1092 NSWNSRNLSFGGRLTLINSVLASIPLYFFSFFKAPICVLKSIERIQRNFLWGGSLEEKKL 1151

Query: 1032 AWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLY------- 1190
             W++W ++CLPKE GGL ++N+ELFN++LL KWKWRLL + D++W  L+R  Y       
Sbjct: 1152 CWVKWDQVCLPKEEGGLRVKNLELFNLALLCKWKWRLLHNDDAIWFDLLRHRYKSFPSFL 1211

Query: 1191 -GPEGVLNRGQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCF 1367
             G    ++    S+WW+D+  +      +  WFK ++  ++G G+   FW   W G   F
Sbjct: 1212 LGDHETVSYANSSIWWRDV--ISSGRGVSDNWFKSNISCRVGNGHNTNFWNFRWYGNQAF 1269

Query: 1368 KEVFLNLFNLSDKQFGLVNEF--GEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQ 1541
             E+F +L+    ++   V E   G  S   WRWN  W                 +L    
Sbjct: 1270 CELFPDLYAKEVRKNVSVAELLGGAGSGLMWRWN--WATPLDVNEEQQALNLQGLLADFS 1327

Query: 1542 LEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTNILKSLWSTDAPSKFMVH 1721
            L     D+W WL +++  + V S Y + +       ++E+    +K LW TD PSK  V 
Sbjct: 1328 LHPTNQDQWRWLSESNGVFSVKSCYFSLLETRQAEYVEENVLEAIKRLWKTDVPSKIKVF 1387

Query: 1722 AWRVLMDSLPTRLALQNRGVI 1784
             WR+L++ LPTR AL +RG I
Sbjct: 1388 GWRLLLNKLPTRAALNHRGKI 1408


>gb|PNX95738.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1375

 Score =  361 bits (926), Expect = e-107
 Identities = 198/513 (38%), Positives = 293/513 (57%), Gaps = 15/513 (2%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            R GF  KW  WM+ACI  G++SVLVNGSPT+E  +++GL++GDPLAPFLFL++AEG  G+
Sbjct: 742  RFGFCNKWIEWMRACIFAGNLSVLVNGSPTAEISIKQGLKQGDPLAPFLFLLVAEGFGGV 801

Query: 504  FTKCVEVGSFEVLNI-ESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKV 680
                VE+  F+  ++  SG  +  LQYADDTL I + + +NLW +KA+LR FE  SGLKV
Sbjct: 802  MKNAVELNLFKGFSVGRSGLQISHLQYADDTLCIGEASVQNLWTMKAILRGFEMASGLKV 861

Query: 681  NFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDR 860
            NF KS L+G+NV +D L VA  FL C  G++P N+LG+P+GANPR   TW P++ +LR R
Sbjct: 862  NFAKSSLMGVNVSQDFLAVACTFLNCSQGTMPFNYLGLPIGANPRSILTWEPLLDRLRKR 921

Query: 861  LSTWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GV--GRK 1028
            L +W ++ +S+G  +  L  +  S    + +F                  +  GV  G+K
Sbjct: 922  LKSWGNKFISLGGRIVMLNSVLNSMPIFFMSFLKMPKKVCKMVVQIQREFLWGGVRGGKK 981

Query: 1029 MAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGPEGV- 1205
            ++W++W  +C  K  GGLG++++ L N+SLL KW+WR+L    S+W  ++   YG E + 
Sbjct: 982  ISWVKWKVVCQDKRRGGLGVKDVNLMNLSLLAKWRWRILQSGPSLWKEILITKYG-ETIK 1040

Query: 1206 ----LNRGQF----SVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQW 1361
                L RG++    S WWKD+ SLD  ++ +K W  +S+  K+G G    FW D W G  
Sbjct: 1041 SCLDLERGRYPSNASRWWKDLCSLDSVVE-SKKWLAESISRKVGNGETTSFWLDKWVGNS 1099

Query: 1362 CFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQ 1541
                +F  LF++S  +  +V++ GE  N  W+WNL W                 +L    
Sbjct: 1100 TLASLFPRLFSISIDKQSMVSDLGECVNGAWQWNLIWRRRIFEWEKELVEQLFQLLHTAV 1159

Query: 1542 LEADVDDRWVWLLDASSSYKVNSVYKTPIPK-SDEYTIDEDKTNILKSLWSTDAPSKFMV 1718
            L ++  D WVW      S+ V S Y     + S +   D  +T  L  LWS+ APSK + 
Sbjct: 1160 L-SENSDCWVWKPGEGGSFSVRSAYLVLEEELSVQVNCDVQETRTLHQLWSSPAPSKVIA 1218

Query: 1719 HAWRVLMDSLPTRLALQNRGVIDFNPGTRALMC 1817
             +W++L++S+PTR  L +RGV+         +C
Sbjct: 1219 FSWKLLLNSIPTRQNLAHRGVLQQTDSKLCAIC 1251



 Score = 80.9 bits (198), Expect = 6e-12
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
 Frame = +1

Query: 7   KRILWSSLIAEKARLAPGSWVIGGDFNTVTNRSDRKG---RSIRFSNAESQNFKHFMVEM 177
           KR LW +L+  K     G+W + GDFN V  R DR+G    S+   + E + F  F+  M
Sbjct: 255 KRRLWKNLLMSKRGFGGGTWCVLGDFNAVYRREDRRGVSDLSVSGLSTEMREFGDFIENM 314

Query: 178 EVVEPPCLGKRYSWYQPNGPTASRIDRIILSPDLIDLWKVRAQWIGNR 321
           EV + P LG+R++W+ PNG   S ID+I++S   +  W   + W+ +R
Sbjct: 315 EVSDVPLLGRRFTWFHPNGIAMSCIDKILISAGWLVQWGDVSAWVLDR 362


>dbj|GAU46725.1| hypothetical protein TSUD_100170 [Trifolium subterraneum]
          Length = 776

 Score =  348 bits (894), Expect = e-106
 Identities = 192/506 (37%), Positives = 279/506 (55%), Gaps = 17/506 (3%)
 Frame = +3

Query: 300  GTMDW**GRMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLI 479
            G +D+  GR GF  KWR WMKAC+  G++SVLVNGSPT E P+ +GL++GDPLAP LFL+
Sbjct: 141  GFLDYMLGRFGFCPKWRAWMKACVWGGNVSVLVNGSPTQEIPIMRGLKQGDPLAPLLFLL 200

Query: 480  IAEGLPGLFTKCVEVGSFEVLNIESGSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFE 659
            +AEGL GL  + VE+  F    +  G+ + +LQYADDTL I + T ENLW +KAVLR FE
Sbjct: 201  VAEGLGGL--RAVEINRFRPFLVGDGAPVSLLQYADDTLCIGEATVENLWVMKAVLRGFE 258

Query: 660  TVSGLKVNFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPV 839
              SGLKVNF KSC++G+NV E+ L +A+ FL C++G  P  +LG+PVGAN R  STW P+
Sbjct: 259  MTSGLKVNFWKSCVIGVNVSEEFLGMASDFLNCRIGKTPFKYLGLPVGANSRKMSTWEPM 318

Query: 840  IKKLRDRLSTWRSRQLSMGEGLH*LIRFSQVSR-----YTTFHSTXXXXXXXXXXXXCNG 1004
            +  +R R+S+W  + +S+G     ++  + V       Y ++                N 
Sbjct: 319  LDTIRGRISSWSCKYVSLGGR---IVLINAVLNAIPIFYLSYMKMPTKVWRQLVKIQRNF 375

Query: 1005 IS*GVGR--KMAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLS-DRDSVWGGL 1175
            +  G+    K  W++W  IC PK   GLGIR++ L N SLL KW+W++LS + + VW  +
Sbjct: 376  LWGGLSNRSKTCWVKWDDICRPKNEVGLGIRDLRLVNTSLLAKWRWKILSHEEEEVWKQI 435

Query: 1176 MRQLYGPEGVLNR--------GQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVR 1331
            ++  YG + + NR           S WW+DI +L+   +F+  WF  +V  K+G G+   
Sbjct: 436  VKARYGSDVIGNRCLGAADIPRSTSNWWRDICNLEG--EFS--WFSSAVGKKVGRGDSTS 491

Query: 1332 FWQDSWCGQWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXX 1511
            FW + W G    ++ F  LF +S ++  ++   G  +  RW+W L W             
Sbjct: 492  FWNEIWIGDQSLRQRFPRLFGISLQKQEVIQNLGSLTEGRWQWELLWRRDRFQWEEDQYR 551

Query: 1512 XXXXILVPIQLEADVDDRWVWLLDASSSYKVNSVYKTPIPKSDEYTIDEDKTN-ILKSLW 1688
                ++ P     D  DRW+WL D    + V S Y       +   I E   N + K LW
Sbjct: 552  EFIDVIAPF-APVDNHDRWLWLGDGIQGFTVKSAYMRLENLVNNRRILEPVENFVFKRLW 610

Query: 1689 STDAPSKFMVHAWRVLMDSLPTRLAL 1766
               APSK     W++L+D + T+  L
Sbjct: 611  KCAAPSKVHAFVWQLLLDRVQTKANL 636


>dbj|GAU36827.1| hypothetical protein TSUD_320640 [Trifolium subterraneum]
          Length = 795

 Score =  348 bits (893), Expect = e-106
 Identities = 193/505 (38%), Positives = 280/505 (55%), Gaps = 10/505 (1%)
 Frame = +3

Query: 300  GTMDW**GRMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLI 479
            G +D+   R GFN KWR WMKACIC GS+SVLVNGSPT E  +++GL++GDPLAP LFL+
Sbjct: 208  GFLDYMLRRFGFNTKWRAWMKACICSGSMSVLVNGSPTEEISIKRGLKQGDPLAPLLFLL 267

Query: 480  IAEGLPGLFTKCVEVGSFEVLNIESGSSLPV--LQYADDTLIICKNTSENLWCLKAVLRI 653
            +AEGL  L  + VE G F+   +  G  LPV  LQYADDTL I + T ENLW LKA+LR 
Sbjct: 268  VAEGLGALMIEAVEKGHFKPFLVGRGR-LPVSILQYADDTLFIGEATVENLWTLKAILRG 326

Query: 654  FETVSGLKVNFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWL 833
            FE VSGLKVNF KSCLVG+NV  D L +A+ FL C++G +   +LG+PVGANP   STW+
Sbjct: 327  FELVSGLKVNFWKSCLVGVNVTHDFLQMASTFLNCRIGRISFIYLGLPVGANPHRYSTWI 386

Query: 834  PVIKKLRDRLSTWRSRQLSMGEGLH*LIRFSQVSR-----YTTFHSTXXXXXXXXXXXXC 998
            P++  ++ RL  W ++ +S+G     ++  + V       + ++                
Sbjct: 387  PMLNLIKRRLGAWGNKYISLGGR---IVLINAVLNAIPIFFLSYMKMPVKVWKEVVSVQR 443

Query: 999  NGIS*GVG--RKMAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGG 1172
            N +  G+   R+++W++W  IC  K+ GGLGIR++   ++SLL KW+W+LL D       
Sbjct: 444  NFLWGGLSKRRRISWVKWIDICKSKKDGGLGIRDLRWVSLSLLEKWRWKLLMD------- 496

Query: 1173 LMRQLYGPEGVLNRGQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWC 1352
                    E  +  G  S WW D+  LD        WF   VR ++G GN + FW+D W 
Sbjct: 497  -------GEEEMQFGTCSAWWNDLCRLDR----GGTWFTQVVRKRMGDGNTINFWKDIWV 545

Query: 1353 GQWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILV 1532
            G    ++ F  L+ +S +Q   V + G W N  WRW L W  +               + 
Sbjct: 546  GNQTLQQRFPRLYGISVQQDNSVRDVGNWVNGVWRWELSWRRNFCVWEEALVRELEEAIR 605

Query: 1533 PIQLEADVDDRWVWLLDASSSYKVNSVYK-TPIPKSDEYTIDEDKTNILKSLWSTDAPSK 1709
               + A  +DRWVW+ + +  + V S+Y         +  +++ +  + K++W +  PSK
Sbjct: 606  HTTITA-TEDRWVWVPNEADGFSVKSLYVFLQGMFGPQNNLNDFECFVFKNIWKSPVPSK 664

Query: 1710 FMVHAWRVLMDSLPTRLALQNRGVI 1784
                AW++ +D +PTR  L  R +I
Sbjct: 665  VCALAWQLCLDRIPTRDNLVIRRII 689


>dbj|GAU18134.1| hypothetical protein TSUD_248350 [Trifolium subterraneum]
          Length = 694

 Score =  345 bits (885), Expect = e-106
 Identities = 202/527 (38%), Positives = 299/527 (56%), Gaps = 29/527 (5%)
 Frame = +3

Query: 324  RMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGL 503
            R GF+EKWR W+KAC+  GS+SVLVNGSPT +  + KGL++GDPLAPFLF+++AEGL  L
Sbjct: 64   RFGFDEKWRSWIKACVFAGSLSVLVNGSPTEQIDISKGLKQGDPLAPFLFILVAEGLGAL 123

Query: 504  FTKCVEVGSFEVLNIES-GSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKV 680
              K V+VG F+ + I + G+ +  LQYADDTL + +   ENLW  KA+LR FE +SGLKV
Sbjct: 124  MKKAVDVGYFKGIQISTTGTIMSHLQYADDTLFVGEACVENLWTTKAILRWFELISGLKV 183

Query: 681  NFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDR 860
            NF KS L G+NVG++ ++ A  FL CK+G +P  +LG+PVGANPR   TW PVI+ L+ R
Sbjct: 184  NFFKSKLYGINVGDNFISSAASFLKCKVGKLPFIYLGLPVGANPRRLVTWNPVIEVLQKR 243

Query: 861  LSTWRSRQLSMGEGLH*LIRFSQVSRYTTFHSTXXXXXXXXXXXXCN--------GIS*G 1016
            L++W+++ +S+G  +  ++  S ++    F+ +             N        G++  
Sbjct: 244  LASWKNKYVSLGGRV--VLLNSVLAAIPIFYLSLFKMPVGVWKKIVNLQRRFLWGGVA-- 299

Query: 1017 VGRKMAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLY-- 1190
               K+ W+ W  +C PK+ GGLG++++ + NISLL KWKWRLLS+  S+W  ++   Y  
Sbjct: 300  GSSKIPWVNWRDVCRPKKEGGLGVKDLRIMNISLLAKWKWRLLSEGKSIWKNVLEDRYRG 359

Query: 1191 GPEG------VLNRGQFSVWWKDINSL-----DDCLQFAKGWFKDSVRIKLGCGNEVRFW 1337
            G  G      V    + S WW D+ ++     +D L     +FK     K+G G + RFW
Sbjct: 360  GESGVGWMSKVWVSSKASPWWNDLMTMGVVAGEDRLHGI--FFK-----KIGNGGDTRFW 412

Query: 1338 QDSWCGQWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXX 1517
             DSW G    KE+F  LF +S ++   V E G   +   RW+L W  +            
Sbjct: 413  HDSWVGTQPLKELFPRLFLISVQKECSVFEVGGGVSG--RWDLKWRRNLFVWEEELRELL 470

Query: 1518 XXILVPIQLEADVDDRWVWLLDASSSYKVNSVYK-------TPIPKSDEYTIDEDKTNIL 1676
              +L PIQL  + +D W       S + V+S+YK        PI +  E   D      L
Sbjct: 471  VNVLTPIQL-INKEDEWRCHYFNGSLFSVSSLYKYLSGIIIPPISRDPELVRD------L 523

Query: 1677 KSLWSTDAPSKFMVHAWRVLMDSLPTRLALQNRGVIDFNPGTRALMC 1817
              LW + APSK +V +W++L+  LPT+  L  RG+++ +  +  ++C
Sbjct: 524  GFLWESLAPSKVIVFSWQLLLSRLPTKANLAIRGIVEHDSNSFCVLC 570


>gb|KYP40876.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 751

 Score =  346 bits (888), Expect = e-106
 Identities = 181/495 (36%), Positives = 274/495 (55%), Gaps = 11/495 (2%)
 Frame = +3

Query: 330  GFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGLFT 509
            GF+E+W  WM+ C+C GS+S LVNGSPT E  + +GL++GDPLAP LFLI  EGL  L T
Sbjct: 127  GFDERWVRWMEGCVCGGSLSALVNGSPTGEVAIGRGLKQGDPLAPSLFLIAVEGLRLLMT 186

Query: 510  KCVEVGSFEVLNIES-GSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVNF 686
            + +++  F+ L++   G  + +LQ+ADDTLII + T +NLWCLKA+LR FE +SG+K+NF
Sbjct: 187  RALDMNLFKGLHLGGEGPLISLLQFADDTLIIGEATMQNLWCLKAILRCFELISGMKINF 246

Query: 687  HKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRLS 866
            HKS +VG++ G D   +A  FL+CK+G +P   LG+P+GANPR  +TW P++  LR+RLS
Sbjct: 247  HKSSVVGIHSGVDFTELAASFLHCKVGQLPFKHLGLPLGANPRKLATWRPILDGLRNRLS 306

Query: 867  TWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GV--GRKMA 1034
            +W+ R LS+G  +  +  +  +    + +F                  +  GV  G K+ 
Sbjct: 307  SWKHRYLSIGGRVTLINAVLNAMPIHFLSFFKAPNSVIKEIVAIQRGFLWRGVEDGSKIP 366

Query: 1035 WIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGPEGVLNR 1214
            W++W  +C  K+ GGLGI+++ LFN +LLGKW WR +    ++W  +++  YG     ++
Sbjct: 367  WVKWETVCKSKDEGGLGIKDVRLFNWALLGKWVWRCMLYPSTMWAKVLQGRYGRIESFSK 426

Query: 1215 -----GQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCFKEVF 1379
                  + S WWKDI  +   LQ    W  + +   +G G   RFW+D W G     +VF
Sbjct: 427  TSNVDRRDSWWWKDIVWV---LQQGNFWLDEKIDRCIGDGTSTRFWEDKWIGGLRLLDVF 483

Query: 1380 LNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQLEADVD 1559
              L++ +     +V   G W  + W W + W                 +L  +Q+ +   
Sbjct: 484  PRLYSFAFDPLSMVGHNGNWEGSTWLWQVKWRREPFVHEVGSVNSLLEMLQGLQIFSSKQ 543

Query: 1560 DRWVWLLDASSSYKVNSVYK-TPIPKSDEYTIDEDKTNILKSLWSTDAPSKFMVHAWRVL 1736
            D+W W+ D    + V S Y         E +   D   ++KSLW   AP K +V  W+V 
Sbjct: 544  DQWRWICDKDGVFSVKSAYSWLQRSLGGELSYSSDFHLVIKSLWKCKAPIKCLVFCWQVF 603

Query: 1737 MDSLPTRLALQNRGV 1781
            M++ P +  LQ RGV
Sbjct: 604  MNAFPCKSLLQVRGV 618


>dbj|GAU43110.1| hypothetical protein TSUD_373050 [Trifolium subterraneum]
          Length = 1099

 Score =  354 bits (908), Expect = e-106
 Identities = 198/524 (37%), Positives = 287/524 (54%), Gaps = 18/524 (3%)
 Frame = +3

Query: 300  GTMDW**GRMGFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLI 479
            G +++  GR GF EKW  W + C+  G++SVLVNGSPT E  +++GL++GDPLAPFLFL+
Sbjct: 458  GFLEYMLGRCGFCEKWIGWTRGCVFAGNLSVLVNGSPTPEINIQRGLKQGDPLAPFLFLL 517

Query: 480  IAEGLPGLFTKCVEVGSFEVLNIESGS-SLPVLQYADDTLIICKNTSENLWCLKAVLRIF 656
            + EG  G+  + VE+  F+  NI  G   +  LQYADDTL I + + ENLW LKA+LR F
Sbjct: 518  VVEGFSGVMRRAVELNLFKGFNIGRGLVEISHLQYADDTLCIGEASVENLWSLKAILRGF 577

Query: 657  ETVSGLKVNFHKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLP 836
            E VSGLKVNF KS L+G+NV    L +A  FL C+LGS+P  +LG+PVGANP+  STW P
Sbjct: 578  EMVSGLKVNFWKSGLMGINVSPTFLTMAATFLNCRLGSIPFKYLGLPVGANPKNGSTWEP 637

Query: 837  VIKKLRDRLSTWRSRQLSMGEGLH*L------IRFSQVSRYTTFHSTXXXXXXXXXXXXC 998
            ++  LR RL++WR++ +S G  +  L      I    +S      +              
Sbjct: 638  LLDHLRKRLNSWRNKHISFGGRIVMLNAVLNAIPIFYLSLLKMPVNVWKQVVRLQRVFLW 697

Query: 999  NGIS*GVGRKMAWIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLM 1178
             G+    G K+ W++WS +C  K  GGLG+R++ + N+SLL KW+WRLL     +W  ++
Sbjct: 698  GGVK--GGNKIKWVKWSVVCRAKNKGGLGVRDVRIVNLSLLAKWRWRLLLPGRPLWKEIL 755

Query: 1179 RQLYGPEGVLNR---------GQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVR 1331
               YG E +L+R            S WWKDI S+D  ++  K W  + V  K+G GN   
Sbjct: 756  VAKYG-EHILHRVDWSDYRIPSSASKWWKDICSIDKVVE-DKNWLVEEVGRKVGNGNSTS 813

Query: 1332 FWQDSWCGQWCFKEVFLNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXX 1511
            FW   W G      +F  LF+LS+ +  +V +F E   +  RW   W             
Sbjct: 814  FWSTKWIGDAPLSVIFPRLFSLSNHKDCMVRDFYEDDGDNERWRFSWRRELFQWEVDRLT 873

Query: 1512 XXXXILVPIQLEADVDDRWVWLLDASSSYKVNSVYKTPIP--KSDEYTIDEDKTNILKSL 1685
                +LV     +D DD W+W  D    + V S Y   I   +S E  ++E+   I + +
Sbjct: 874  RLKELLVSFVFSSD-DDSWIWRPDPDGVFSVKSAYNLLIEELRSGE-ELEEEAALIFEQI 931

Query: 1686 WSTDAPSKFMVHAWRVLMDSLPTRLALQNRGVIDFNPGTRALMC 1817
            W + APSK +  +W++L D +PTR  L+ RG++  +     + C
Sbjct: 932  WESPAPSKVIAFSWQLLYDRIPTRRNLEVRGLLGLDSPWECVGC 975


>gb|KYP50779.1| Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 1102

 Score =  352 bits (903), Expect = e-105
 Identities = 184/495 (37%), Positives = 274/495 (55%), Gaps = 11/495 (2%)
 Frame = +3

Query: 330  GFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGLFT 509
            GF+E+W  WM+ C+C GS+S LVNGSPT E  + +GL++GDPLAP LFLI  EGL  L T
Sbjct: 478  GFDERWVRWMEGCVCGGSLSALVNGSPTVEVTIGRGLKQGDPLAPSLFLIAVEGLRLLMT 537

Query: 510  KCVEVGSFEVLNIES-GSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVNF 686
            + +++  F+ L +   G  + +LQ+ADDTLII + T +NLWCLKA+LR FE +SG+++NF
Sbjct: 538  RALDMNLFKGLQLGGEGPLISLLQFADDTLIIGEATMQNLWCLKAILRCFELISGMRINF 597

Query: 687  HKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRLS 866
            HKS +VG++ GED   +A  FL+CKLG +P   LG+P+GANPR  +TW P++  LR RLS
Sbjct: 598  HKSSVVGIHSGEDFTELAASFLHCKLGQLPFKHLGLPLGANPRKLATWRPILDGLRKRLS 657

Query: 867  TWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GV--GRKMA 1034
            +W+ R LS+G  +  +  +  +    + +F                + +  GV  G K+ 
Sbjct: 658  SWKHRYLSIGGRVTLINAVLNAMPIHFLSFFKAPNSVIKEIVAIQRDFLWRGVKDGSKIP 717

Query: 1035 WIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYG-----PE 1199
            W++W  +C  K+ GGLGI+++ LFN +LLGKW WR +    ++W  +++  YG     P+
Sbjct: 718  WVKWETVCKSKDKGGLGIKDVRLFNWALLGKWVWRCMISPRTIWAKVLQGRYGCIESFPK 777

Query: 1200 GVLNRGQFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCFKEVF 1379
                  + S WWKDI  +   LQ    W  + +   +G G+  RFW+D W G     +VF
Sbjct: 778  TPNVDKRDSWWWKDIVWV---LQQGNYWLDEKIERCIGDGSSTRFWEDKWIGGLRLLDVF 834

Query: 1380 LNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQLEADVD 1559
              L++ +     +V   G W  + W W + W                 +L  IQ+ +   
Sbjct: 835  PRLYSFAFDPLSMVGHNGNWEGSTWLWQIKWRRETFVHEEGSVNTLIEMLQEIQIFSSKQ 894

Query: 1560 DRWVWLLDASSSYKVNSVYK-TPIPKSDEYTIDEDKTNILKSLWSTDAPSKFMVHAWRVL 1736
            D+W W+ D    + V S Y         E +   D   + KSLW   AP K +V  W+V 
Sbjct: 895  DQWRWICDKDGVFSVKSAYSWLQHSMGGELSYSSDFILVTKSLWKCKAPIKCLVFCWQVF 954

Query: 1737 MDSLPTRLALQNRGV 1781
            M++ P +  LQ RGV
Sbjct: 955  MNAFPCKSLLQVRGV 969



 Score = 67.8 bits (164), Expect = 6e-08
 Identities = 28/76 (36%), Positives = 48/76 (63%)
 Frame = +1

Query: 64  WVIGGDFNTVTNRSDRKGRSIRFSNAESQNFKHFMVEMEVVEPPCLGKRYSWYQPNGPTA 243
           W I GDFNTV  + +RKG +  +   + + F  F+ +ME+++ P +GKRY+W++ +G   
Sbjct: 11  WCIVGDFNTVRRQDERKGVNDEYGVRDMEEFNSFIRDMELIDIPLVGKRYTWFKGDGSMM 70

Query: 244 SRIDRIILSPDLIDLW 291
           SR+DR+++S      W
Sbjct: 71  SRLDRVLVSESWSAHW 86


>gb|KYP34591.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 817

 Score =  345 bits (885), Expect = e-105
 Identities = 185/495 (37%), Positives = 274/495 (55%), Gaps = 11/495 (2%)
 Frame = +3

Query: 330  GFNEKWRLWMKACICCGSISVLVNGSPTSEFPMEKGLRKGDPLAPFLFLIIAEGLPGLFT 509
            GF+E+W  WM+AC+C GS+S LVNGSPT+E  + +GL++GDPLAP LFLI AEGL  L +
Sbjct: 220  GFHERWVRWMEACVCGGSLSTLVNGSPTAEVSLGRGLKQGDPLAPSLFLIAAEGLRLLMS 279

Query: 510  KCVEVGSFEVLNIES-GSSLPVLQYADDTLIICKNTSENLWCLKAVLRIFETVSGLKVNF 686
            + +++  F+ L+I   G  + +LQ+ADDTLII + T +NLWCLKA+LR FE +SG+K+NF
Sbjct: 280  RALDMNLFKGLHIGGEGPPISLLQFADDTLIIGEATMQNLWCLKAILRGFELISGMKINF 339

Query: 687  HKSCLVGLNVGEDDLNVATRFLYCKLGSVPLNFLGIPVGANPRLSSTWLPVIKKLRDRLS 866
            HKSC+VG++ G D  N+A  FL+CK+G +P   LG+P+GANPR   TW P++  LR RLS
Sbjct: 340  HKSCVVGIHSGADFTNLAAAFLHCKVGQLPFKHLGLPLGANPRKLYTWKPMLDSLRKRLS 399

Query: 867  TWRSRQLSMGEGLH*L--IRFSQVSRYTTFHSTXXXXXXXXXXXXCNGIS*GV--GRKMA 1034
            +W+ + LS+G  +  +  +  +    + +F                + +  GV  G K+ 
Sbjct: 400  SWKYKHLSIGGRVTLINSVLNAIPIHFLSFFKAPNLVIKEIVAIQRDFLWRGVKDGSKIP 459

Query: 1035 WIRWSKICLPKECGGLGIRNMELFNISLLGKWKWRLLSDRDSVWGGLMRQLYGP-EGVLN 1211
            W++W  +C  K  GGLGI+++ LFN +LLGKW W+ +     +W  ++   YG  E   N
Sbjct: 460  WVKWETVCKSKVEGGLGIKDVRLFNWALLGKWVWKCMQSPGMLWAKVLHHRYGRIESFSN 519

Query: 1212 RG----QFSVWWKDINSLDDCLQFAKGWFKDSVRIKLGCGNEVRFWQDSWCGQWCFKEVF 1379
                  + S+WWKDI  +   L     W  + +   +G G   RFW+D W G     EVF
Sbjct: 520  CSNVDRRTSLWWKDIVWV---LHQGNCWLDEKIERCIGDGTMTRFWEDKWIGGLRLLEVF 576

Query: 1380 LNLFNLSDKQFGLVNEFGEWSNNRWRWNLGWTESXXXXXXXXXXXXXXILVPIQLEADVD 1559
              LF+ +     +V + G W  + W W + W                 +L  +Q+ +   
Sbjct: 577  PRLFSFALDPLSVVADNGTWEGSTWVWQVKWRREPFVHEGRSVNILLDMLKGLQVISSRQ 636

Query: 1560 DRWVWLLDASSSYKVNSVYK-TPIPKSDEYTIDEDKTNILKSLWSTDAPSKFMVHAWRVL 1736
            D W W+ D    + V S Y         E     D   ++K LW   AP K +V  W+VL
Sbjct: 637  DYWRWIYDKDGVFSVKSAYLWLQRSVGGELRNSSDFQLVIKRLWKCKAPIKCLVFCWQVL 696

Query: 1737 MDSLPTRLALQNRGV 1781
            +++ P +  LQ RGV
Sbjct: 697  LNAFPCKSLLQVRGV 711