BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00014535
         (1439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU51717.1| hypothetical protein TSUD_415230, partial [Trifo...   544   e-180
gb|PNX78431.1| transposon Tf2-1 polyprotein, partial [Trifolium ...   523   e-179
gb|PNX84282.1| hypothetical protein L195_g040340 [Trifolium prat...   519   e-179
gb|PNX96980.1| retrotransposon-related protein, partial [Trifoli...   541   e-178
gb|PNY17392.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   535   e-173
dbj|GAU30089.1| hypothetical protein TSUD_392450 [Trifolium subt...   539   e-172
gb|PNX94328.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   522   e-168
dbj|GAU18876.1| hypothetical protein TSUD_228660 [Trifolium subt...   521   e-168
gb|PNY06854.1| hypothetical protein L195_g003333 [Trifolium prat...   496   e-167
gb|KYP66317.1| Retrotransposable element Tf2 [Cajanus cajan]          494   e-166
dbj|GAU34024.1| hypothetical protein TSUD_393700 [Trifolium subt...   504   e-164
dbj|GAU26218.1| hypothetical protein TSUD_354400 [Trifolium subt...   470   e-150
dbj|GAU36702.1| hypothetical protein TSUD_16140 [Trifolium subte...   453   e-143
gb|PNX87538.1| hypothetical protein L195_g043629 [Trifolium prat...   415   e-140
gb|KYP64105.1| Retrotransposable element Tf2 [Cajanus cajan]          419   e-137
gb|KYP55632.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   422   e-135
gb|KYP63409.1| Retrotransposable element Tf2 [Cajanus cajan]          395   e-131
gb|KYP55262.1| Retrotransposable element Tf2, partial [Cajanus c...   395   e-131
gb|PNX92763.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   417   e-129
dbj|GAU41853.1| hypothetical protein TSUD_366000 [Trifolium subt...   419   e-129

>dbj|GAU51717.1| hypothetical protein TSUD_415230, partial [Trifolium subterraneum]
          Length = 1147

 Score =  544 bits (1401), Expect = e-180
 Identities = 259/412 (62%), Positives = 320/412 (77%), Gaps = 2/412 (0%)
 Frame = +1

Query: 10   HLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTAV 189
            H PYGLLQPLPIP  +WED+SLDFI+GLPSFQ++TA+LV+VDRLSK+AHFG+LP +FTAV
Sbjct: 716  HSPYGLLQPLPIPHRVWEDVSLDFIVGLPSFQSHTAILVVVDRLSKAAHFGLLPTHFTAV 775

Query: 190  RVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEI 369
            +VAD+FAKM+  +HGMP+S+VSDRDPIF+S FWQELF LSGTKLRMS+AYHPQSDGQTEI
Sbjct: 776  KVADLFAKMICRLHGMPRSMVSDRDPIFLSHFWQELFHLSGTKLRMSTAYHPQSDGQTEI 835

Query: 370  VNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVS 549
            VNK LQQYLRCFV ++PS+WGK LHWAEWHYNT TH+STG +P ++VYG+ PPTL +Y+ 
Sbjct: 836  VNKVLQQYLRCFVSDKPSQWGKFLHWAEWHYNTATHTSTGLSPFQVVYGRAPPTLVDYIP 895

Query: 550  GATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHR 729
            G++ I+A++ATL+DR  +L +L+NKLLKAQQ MK  AD+ R+ H F+ GDLVFVKLRP+R
Sbjct: 896  GSSTIQAIDATLSDRNIILQLLKNKLLKAQQIMKEQADQHRISHSFKEGDLVFVKLRPYR 955

Query: 730  QRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAKP 909
            Q S+  +R HKLSKR+YGPF+L+K++GEVAFE++LP  SKIH V HVSQLKPC D     
Sbjct: 956  QNSVLGRRVHKLSKRFYGPFKLIKAIGEVAFELELPPNSKIHPVFHVSQLKPCFDNNTAT 1015

Query: 910  LKLPPTAVNNSPVIVPAAVLNSRNR--NDITEVLIQWEGLFPEDATWENFEELKLNYPSL 1083
            L+LP  A++N P I P AVL+ +N   ND  EVLIQW+GLFPEDATWEN+E++K  YP+ 
Sbjct: 1016 LELPTEAIDNQPCIQPLAVLDWKNNELNDQIEVLIQWKGLFPEDATWENYEDIKATYPAF 1075

Query: 1084 HLEDKVSVQGGPVVTAQXXXXXXXXXXXXXXXXXXLPIPQVRAKRNRTKPKW 1239
             LEDKV + G      Q                   PIP  R KRN   P W
Sbjct: 1076 DLEDKVILNGTRDEVNQKNEDFEKELGLTEDEEE--PIPYQRTKRNTRGPAW 1125


>gb|PNX78431.1| transposon Tf2-1 polyprotein, partial [Trifolium pratense]
          Length = 562

 Score =  523 bits (1347), Expect = e-179
 Identities = 259/426 (60%), Positives = 312/426 (73%), Gaps = 7/426 (1%)
 Frame = +1

Query: 4    PTHLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFT 183
            PTH PYGLLQPLPIP  +WEDIS+DFI+GLP FQ+ T V V+VDR SK+AHFGMLP +FT
Sbjct: 152  PTHSPYGLLQPLPIPTGVWEDISMDFIVGLPPFQHFTVVFVVVDRFSKAAHFGMLPTHFT 211

Query: 184  AVRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQT 363
            A +VAD+FA MVS +HGMPKSI+SDRDPIFMSKFWQ+LF LSGT LRMS+AYHPQ+DGQT
Sbjct: 212  ATKVADLFATMVSKLHGMPKSIISDRDPIFMSKFWQQLFILSGTVLRMSTAYHPQTDGQT 271

Query: 364  EIVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANY 543
            EIVNKALQQYLRCFV +QP KWG  LHWAEWHYNT+ HSSTGFTP E+VYGKKPP++  Y
Sbjct: 272  EIVNKALQQYLRCFVHDQPKKWGAFLHWAEWHYNTSQHSSTGFTPFEVVYGKKPPSIPQY 331

Query: 544  VSGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRP 723
            VSG T IEA++ATL DRE++L VLR KLLKAQ  MK +ADK R+PHPF+ GD  +VKLRP
Sbjct: 332  VSGTTPIEALDATLTDRETILQVLRKKLLKAQDDMKKFADKHRIPHPFKEGDFAYVKLRP 391

Query: 724  HRQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAA 903
            +RQ S+   R  KL+KRY+GPF+L++++G VAFE+ LP  SKIH V HVSQLKPC D   
Sbjct: 392  YRQTSVAGHRIQKLAKRYFGPFKLIRAMGPVAFELALPPDSKIHPVFHVSQLKPCFDPTN 451

Query: 904  KPLKLPPTAVNNSPVIVPAAVLNSRNRND--ITEVLIQWEGLFPEDATWENFEELKLNYP 1077
                LP     +  VI P AVL  R+ +D  ++ VL+QW GL PED +WE   +LKL YP
Sbjct: 452  DSSPLPSMNAEDQLVIEPLAVLGWRHDSDGILSHVLVQWAGLLPEDTSWEPLSDLKLAYP 511

Query: 1078 SLHLEDKVSVQGG-----PVVTAQXXXXXXXXXXXXXXXXXXLPIPQVRAKRNRTKPKWT 1242
              +LEDKV+V GG     PV  AQ                  L  P  + KR ++KP W 
Sbjct: 512  QFNLEDKVAVDGGKDVMDPVNEAQ------------------LEEPMGKGKRIKSKPIWF 553

Query: 1243 RDYAMT 1260
             D+ ++
Sbjct: 554  DDFQVS 559


>gb|PNX84282.1| hypothetical protein L195_g040340 [Trifolium pratense]
          Length = 482

 Score =  519 bits (1337), Expect = e-179
 Identities = 244/367 (66%), Positives = 301/367 (82%), Gaps = 2/367 (0%)
 Frame = +1

Query: 7    THLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTA 186
            TH PYGLLQPLPIP  +WEDISLDF++GLPSFQ NT +LV+VDRLSK+AHFGMLP  FTA
Sbjct: 67   THSPYGLLQPLPIPGQVWEDISLDFVVGLPSFQANTVILVVVDRLSKAAHFGMLPTQFTA 126

Query: 187  VRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTE 366
             +VAD+F +M+  +HGMP+SIVSDRDPIF+S+FWQELFRLSGTKLRMSSAYHPQSDGQTE
Sbjct: 127  AKVADLFVRMICKLHGMPRSIVSDRDPIFLSRFWQELFRLSGTKLRMSSAYHPQSDGQTE 186

Query: 367  IVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYV 546
            IVNK LQQYLRCFV ++P +WG+ LHWAEWHYNT  H+STG +P ++VYG+ PPTLA+Y+
Sbjct: 187  IVNKMLQQYLRCFVHDKPKQWGQFLHWAEWHYNTAIHTSTGMSPFQVVYGRAPPTLADYI 246

Query: 547  SGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPH 726
             G+TN++AVEA   +R  VL +L+ KLLKAQ TMK  AD+KR  H F+VGD VFVKLRP+
Sbjct: 247  PGSTNLQAVEANEMERTEVLQMLKKKLLKAQATMKENADQKRTQHSFKVGDKVFVKLRPY 306

Query: 727  RQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAK 906
            RQ S+  +R HKL+KRYYGPF+L+ ++GEVAF+++LP+ S+IH V HVSQLKPC D    
Sbjct: 307  RQNSVAGKRIHKLAKRYYGPFKLVHALGEVAFQLELPSTSRIHPVFHVSQLKPCFDDTEL 366

Query: 907  PLKLPPTAVNNSPVIVPAAVLNSRNRND--ITEVLIQWEGLFPEDATWENFEELKLNYPS 1080
             L LP   V N P I P AVL+ +  +D  IT+VLIQWEGLFPEDATWE+++++K  YP+
Sbjct: 367  SLDLPLETVGNLPEIRPLAVLDWQISDDEGITKVLIQWEGLFPEDATWEDYDDIKETYPA 426

Query: 1081 LHLEDKV 1101
             +LEDKV
Sbjct: 427  FNLEDKV 433


>gb|PNX96980.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1220

 Score =  541 bits (1395), Expect = e-178
 Identities = 250/373 (67%), Positives = 306/373 (82%), Gaps = 2/373 (0%)
 Frame = +1

Query: 4    PTHLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFT 183
            P HLPYGLLQPLP+P  +WEDISLDFIIGLPSFQ +T +LV+VDR SK+AHFGMLP + T
Sbjct: 831  PNHLPYGLLQPLPVPAGVWEDISLDFIIGLPSFQTHTVILVVVDRFSKAAHFGMLPTHHT 890

Query: 184  AVRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQT 363
            A +VAD+FA+M+  +HGMPKSIVSDRDPIF+SKFWQ+LF+LSGTKLRMS+AYHPQ+DGQT
Sbjct: 891  ASKVADLFARMICRLHGMPKSIVSDRDPIFVSKFWQKLFQLSGTKLRMSTAYHPQTDGQT 950

Query: 364  EIVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANY 543
            EIVNKALQQYLRCFV   P  WG  LHWAEWHYNT+ HSSTGFTP E+VYGKKPP+L  Y
Sbjct: 951  EIVNKALQQYLRCFVHNTPKTWGNFLHWAEWHYNTSIHSSTGFTPFEVVYGKKPPSLPQY 1010

Query: 544  VSGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRP 723
            ++G T+IEA++  L DRE++L +L+NKLLKAQ+TMK +ADK R+PHPF+ GD V+VKLRP
Sbjct: 1011 LTGTTDIEALDTMLTDRENILQILKNKLLKAQETMKRFADKSRIPHPFKEGDYVYVKLRP 1070

Query: 724  HRQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAA 903
            HRQ S+   R  KLSKRYYGPFQ++K++G VAFE+ LP  SKIH V HVSQLKPC  T+ 
Sbjct: 1071 HRQVSVAGHRLRKLSKRYYGPFQIIKAMGPVAFELSLPQGSKIHPVFHVSQLKPCDSTST 1130

Query: 904  KPLKLPPTAVNNSPVIVPAAVLNSRNR--NDITEVLIQWEGLFPEDATWENFEELKLNYP 1077
             PL LPP AV+N P++ P A+L  R++   D  +VLIQWEG+ PED TWE+ E+++  +P
Sbjct: 1131 PPLNLPPLAVDNQPIVQPLAILGWRHKEGTDQQQVLIQWEGMLPEDTTWEDLEDMRAIFP 1190

Query: 1078 SLHLEDKVSVQGG 1116
             L+LEDKV V+ G
Sbjct: 1191 DLNLEDKVFVEEG 1203


>gb|PNY17392.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1510

 Score =  535 bits (1378), Expect = e-173
 Identities = 250/370 (67%), Positives = 305/370 (82%), Gaps = 2/370 (0%)
 Frame = +1

Query: 4    PTHLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFT 183
            PTH PYGLLQPLPIP  +WEDISLDF++GLPSFQ +T VLV+VDRLSK+AHFG+LP +FT
Sbjct: 1080 PTHSPYGLLQPLPIPDKVWEDISLDFVVGLPSFQTHTVVLVVVDRLSKAAHFGLLPTHFT 1139

Query: 184  AVRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQT 363
            A +VAD+FAKMV  +HGMP+SIVSDRDPIF+S FWQELFRLSGTKLRMS+AYHPQSDGQT
Sbjct: 1140 AAKVADLFAKMVCKLHGMPRSIVSDRDPIFLSHFWQELFRLSGTKLRMSTAYHPQSDGQT 1199

Query: 364  EIVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANY 543
            E VNK LQQYLRCFV ++P +WG  LHWAEWHYNT  H+STG +P E+VYG+ PPTLA+Y
Sbjct: 1200 ENVNKVLQQYLRCFVHDKPKQWGHYLHWAEWHYNTAIHTSTGISPYEVVYGRPPPTLADY 1259

Query: 544  VSGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRP 723
            V G++ ++AV+ATL +R+ V+ VL+NKLLKAQ TMK YAD KR+PH F+VGD VFVKLRP
Sbjct: 1260 VPGSSKLQAVDATLTERDIVIEVLKNKLLKAQNTMKEYADLKRIPHQFKVGDWVFVKLRP 1319

Query: 724  HRQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAA 903
            +RQ S+  +R HKLSKR+YGPF+L++++GEVAFE++LP  S+IH V HVSQLKPC D   
Sbjct: 1320 YRQNSVLGRRFHKLSKRFYGPFKLVRAIGEVAFELELPDTSRIHPVFHVSQLKPCFDNTV 1379

Query: 904  KPLKLPPTAVNNSPVIVPAAVLNSR--NRNDITEVLIQWEGLFPEDATWENFEELKLNYP 1077
             PL LPP  V+N P I P A+L+ R    N   E L+QWEGLFPEDATWEN+++LK +YP
Sbjct: 1380 VPLALPPETVDNQPCITPIAILDWRTNEENGQQEALVQWEGLFPEDATWENYQDLKNSYP 1439

Query: 1078 SLHLEDKVSV 1107
            +   ED VS+
Sbjct: 1440 TFDHEDMVSL 1449


>dbj|GAU30089.1| hypothetical protein TSUD_392450 [Trifolium subterraneum]
          Length = 1853

 Score =  539 bits (1389), Expect = e-172
 Identities = 249/367 (67%), Positives = 306/367 (83%), Gaps = 2/367 (0%)
 Frame = +1

Query: 4    PTHLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFT 183
            PTH PYGLLQPLPIP+HIWEDIS+DFI+GLPSFQ+ T + V+VDR SK+AHFGMLP  FT
Sbjct: 1105 PTHAPYGLLQPLPIPKHIWEDISMDFIVGLPSFQHYTVIFVVVDRFSKAAHFGMLPTGFT 1164

Query: 184  AVRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQT 363
            AV+VA++F  MV  +HGMP SIVSDRDPIF+SKFWQELF LSGTKLRMS+AYHPQSDGQT
Sbjct: 1165 AVKVAELFTTMVCKLHGMPHSIVSDRDPIFLSKFWQELFHLSGTKLRMSTAYHPQSDGQT 1224

Query: 364  EIVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANY 543
            E+VNK LQQYLRCFV +QP +WGK +HWAEWHYNT  H+STG++P ++VYGK PP+L  Y
Sbjct: 1225 EVVNKTLQQYLRCFVHDQPKRWGKYIHWAEWHYNTAIHTSTGYSPFQVVYGKPPPSLPQY 1284

Query: 544  VSGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRP 723
            ++G + +EA+++ L++RE +L  L+ KLLKAQQ MK YAD+ R PH F+ GDLV+VKLRP
Sbjct: 1285 LAGTSQLEALDSELSNREIILQNLKKKLLKAQQNMKIYADQHRSPHTFKTGDLVYVKLRP 1344

Query: 724  HRQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAA 903
            +RQ SL  QRTHKLSKR+YGPF+LL+ +G+VAFE++LP +SKIH V HVS+LKPC D A+
Sbjct: 1345 YRQTSLPAQRTHKLSKRFYGPFKLLRQIGDVAFELELPPESKIHPVFHVSKLKPCHDPAS 1404

Query: 904  KPLKLPPTAVNNSPVIVPAAVLNSRNRNDIT--EVLIQWEGLFPEDATWENFEELKLNYP 1077
            KPL LPP AV+NSP++ P AVL+ +     T  +VLIQW GL+PEDATWE+FEE+K  YP
Sbjct: 1405 KPLVLPPDAVDNSPMVQPLAVLDWKEEPGQTSPQVLIQWAGLYPEDATWESFEEIKKAYP 1464

Query: 1078 SLHLEDK 1098
             LHLEDK
Sbjct: 1465 HLHLEDK 1471


>gb|PNX94328.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1474

 Score =  522 bits (1345), Expect = e-168
 Identities = 244/377 (64%), Positives = 308/377 (81%), Gaps = 2/377 (0%)
 Frame = +1

Query: 10   HLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTAV 189
            H PYGLLQPLPIP+ +WEDISLDFI+GLPS Q++T + V+VDRLSK+AHFG LP +FTA+
Sbjct: 1076 HSPYGLLQPLPIPEKVWEDISLDFIVGLPSVQSHTVIFVVVDRLSKAAHFGSLPTHFTAI 1135

Query: 190  RVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEI 369
            +VAD+FAKMV  +HGMP+SIVSDRDPIF+S+FWQELF+LSGTKLRMS+AYHPQSDGQTEI
Sbjct: 1136 KVADLFAKMVCKLHGMPRSIVSDRDPIFLSQFWQELFKLSGTKLRMSTAYHPQSDGQTEI 1195

Query: 370  VNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVS 549
            VNK LQQYLRCFV ++P++W + LHWAEWHYNT  H+STG +P +IVYG+ PP LA+Y+ 
Sbjct: 1196 VNKVLQQYLRCFVHDKPNQWEQFLHWAEWHYNTAIHTSTGLSPFQIVYGRPPPALADYIP 1255

Query: 550  GATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHR 729
            G+++I+A++ATL DR+ +L  L+NKL KAQ  MK  AD+ R+PH F+VGDLVFVKLRP+R
Sbjct: 1256 GSSSIQAIDATLIDRDMMLQNLKNKLQKAQAIMKEQADQHRIPHKFKVGDLVFVKLRPYR 1315

Query: 730  QRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAKP 909
            Q S+  +R HKLSKR+YGPF+L+K++G+VAFE++LP  S+IH V HVSQLKPC D  ++P
Sbjct: 1316 QNSVMGRRIHKLSKRFYGPFKLIKAIGDVAFELELPPTSRIHPVFHVSQLKPCFDETSEP 1375

Query: 910  LKLPPTAVNNSPVIVPAAVLN--SRNRNDITEVLIQWEGLFPEDATWENFEELKLNYPSL 1083
            L LP  A+ N PVI P AVL+       +  EVLIQWEGLFPEDATWE ++E++  YP+ 
Sbjct: 1376 LDLPLEALGNQPVIKPLAVLDWKQNESGEFVEVLIQWEGLFPEDATWEKYQEIQSTYPTF 1435

Query: 1084 HLEDKVSVQGGPVVTAQ 1134
             LEDKV+  G   VT Q
Sbjct: 1436 DLEDKVNFDGTWDVTNQ 1452


>dbj|GAU18876.1| hypothetical protein TSUD_228660 [Trifolium subterraneum]
          Length = 1494

 Score =  521 bits (1343), Expect = e-168
 Identities = 243/367 (66%), Positives = 303/367 (82%), Gaps = 2/367 (0%)
 Frame = +1

Query: 10   HLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTAV 189
            H PYGLLQPLPIP  +WEDIS+DFI+GLPSFQ++T + V+VDRLSK+AHFGML  +FTA 
Sbjct: 1085 HAPYGLLQPLPIPDRVWEDISMDFIVGLPSFQSHTVIFVVVDRLSKAAHFGMLATHFTAA 1144

Query: 190  RVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEI 369
            +VAD+FA MV  + GMP+SIVSDRDPIF+S FWQELFRLSGTKLRMS+AYHPQSDGQTEI
Sbjct: 1145 KVADLFATMVCKLLGMPRSIVSDRDPIFLSNFWQELFRLSGTKLRMSTAYHPQSDGQTEI 1204

Query: 370  VNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVS 549
            VNK LQQYLRCFV  +P++WG  LHWAEWHYNT  H++TG +P ++VYG+ PP L +Y+ 
Sbjct: 1205 VNKTLQQYLRCFVHHKPTQWGSYLHWAEWHYNTAIHTATGLSPFQVVYGRSPPALQDYMV 1264

Query: 550  GATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHR 729
            G+T I+AVEATL DR++VL  L+NKLLKAQ+ MK  AD++R+PH F +GDLVFVKLRP+R
Sbjct: 1265 GSTQIQAVEATLVDRDTVLQELKNKLLKAQEVMKAIADQRRIPHKFVIGDLVFVKLRPYR 1324

Query: 730  QRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAKP 909
            Q S+  +R HKLSKRYYGPF+L++++GEVAF+++LP  SKIH V HVSQLKPC   A   
Sbjct: 1325 QISVAGRRIHKLSKRYYGPFKLIQAIGEVAFKLELPPTSKIHPVFHVSQLKPCYGDAVTA 1384

Query: 910  LKLPPTAVNNSPVIVPAAVLNSRNRNDITE--VLIQWEGLFPEDATWENFEELKLNYPSL 1083
            L+LP  AV+N P+I P +VLN +  N+  E  VLIQWEGLFPED+TWE+++++ L YP+ 
Sbjct: 1385 LELPAEAVDNQPLIQPLSVLNWKWDNEAHEWQVLIQWEGLFPEDSTWESYQDILLTYPTF 1444

Query: 1084 HLEDKVS 1104
            HLEDKVS
Sbjct: 1445 HLEDKVS 1451


>gb|PNY06854.1| hypothetical protein L195_g003333 [Trifolium pratense]
          Length = 669

 Score =  496 bits (1278), Expect = e-167
 Identities = 242/418 (57%), Positives = 303/418 (72%), Gaps = 2/418 (0%)
 Frame = +1

Query: 10   HLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTAV 189
            H PYG+LQPLPIP  +WEDIS+DFI+GLPSFQ +T VLV+VDR SK+AHFGML  ++ A 
Sbjct: 257  HSPYGILQPLPIPNGVWEDISMDFIVGLPSFQGHTVVLVVVDRFSKAAHFGMLQTHYNAS 316

Query: 190  RVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEI 369
            +VAD+FAKM+  +HGMPKSIVSDRDPIF+SKFWQ+LF LSGT LRMS AYHPQ+DGQTEI
Sbjct: 317  KVADLFAKMICRLHGMPKSIVSDRDPIFISKFWQQLFHLSGTTLRMSIAYHPQTDGQTEI 376

Query: 370  VNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVS 549
            VNKALQQYLRCFV +QP KWG  LHWAEWHYNT+ H+ST  TP EIVYGKKPP+L  Y+ 
Sbjct: 377  VNKALQQYLRCFVHDQPKKWGNYLHWAEWHYNTSQHASTTLTPFEIVYGKKPPSLLQYIP 436

Query: 550  GATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHR 729
            G+T+IEA+++TL+DRE++L  LR KLL+AQ+ MK +AD  R PH F+VGD V+VKLRP+R
Sbjct: 437  GSTSIEALDSTLSDRETILQTLRKKLLRAQEDMKKFADAHRTPHTFKVGDYVYVKLRPYR 496

Query: 730  QRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAKP 909
            Q S+   R  KL+KRY+GPFQ+  ++G VAFE+ LPA S+IH V HVSQLK C +     
Sbjct: 497  QTSVAGHRIQKLAKRYFGPFQIKSAMGPVAFELILPADSRIHPVFHVSQLKHCYNPTVAS 556

Query: 910  LKLPPTAVNNSPVIVPAAVLNSRNRND--ITEVLIQWEGLFPEDATWENFEELKLNYPSL 1083
            L LPP   ++  +I P  VL  R+ ++  ++  LIQW GL PED +WE  E+L+  YP  
Sbjct: 557  LPLPPMTPDDQFLIEPLVVLGWRHNDEGILSHALIQWAGLLPEDTSWEPLEDLRKAYPQF 616

Query: 1084 HLEDKVSVQGGPVVTAQXXXXXXXXXXXXXXXXXXLPIPQVRAKRNRTKPKWTRDYAM 1257
            +LE+KV+V GG  V                        P  +AKR R +PKW  D+ M
Sbjct: 617  NLENKVAVDGGSNV--------MDLTSPAHTDEAQAEEPMGKAKRIRGRPKWQDDFYM 666


>gb|KYP66317.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 689

 Score =  494 bits (1272), Expect = e-166
 Identities = 247/420 (58%), Positives = 306/420 (72%), Gaps = 4/420 (0%)
 Frame = +1

Query: 4    PTHLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFT 183
            PTHLPYGLLQPL  P  IWEDISLDF+ GLPSFQ  T + V+VDR SK+AHFGMLP +FT
Sbjct: 261  PTHLPYGLLQPLAPPTAIWEDISLDFVTGLPSFQTYTVIFVVVDRFSKAAHFGMLPTSFT 320

Query: 184  AVRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQT 363
            AV+VA++FA MV  +HGMPKSIVSDRDPIFMS FWQELFR+SGTKLRMSSAYHPQSDGQT
Sbjct: 321  AVKVAELFAIMVCKLHGMPKSIVSDRDPIFMSHFWQELFRMSGTKLRMSSAYHPQSDGQT 380

Query: 364  EIVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANY 543
            E VNK L+QYLR FV  +P  WGK LHWAEWHYN+  H++TG TP E+VYG+ PP+L  Y
Sbjct: 381  EAVNKMLEQYLRAFVHTEPRLWGKYLHWAEWHYNSAKHTTTGITPYEVVYGQPPPSLPQY 440

Query: 544  VSGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRP 723
            + G +  EA+ + L  RE +L  LR+KLLKAQ TMK YAD+KR+PHPF+VGD V VKLRP
Sbjct: 441  LIGTSRNEAMNSDLTAREELLAKLRSKLLKAQSTMKHYADQKRLPHPFRVGDYVLVKLRP 500

Query: 724  HRQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAA 903
            +RQ +    RT KL++R+YGPF+++K +G+VAF++DLP  ++IH V HVS+LK  K++  
Sbjct: 501  YRQVTTKNNRTSKLAQRFYGPFRVVKQIGDVAFQLDLPDGAQIHPVFHVSKLKLFKNSDV 560

Query: 904  KP-LKLPPTAVNNSPVIVPAAVLNSRN--RNDITEVLIQWEGLFPEDATWENFEELKLNY 1074
             P L+LPP   +N P + P A+L+ R   R+   E LIQW+GLFPEDATWE+ E L   Y
Sbjct: 561  TPALELPPVTCHNQPKLQPLAMLDWRESPRSGAREALIQWQGLFPEDATWEDLEMLLEEY 620

Query: 1075 PSLHLEDKVSVQG-GPVVTAQXXXXXXXXXXXXXXXXXXLPIPQVRAKRNRTKPKWTRDY 1251
            P+LHLEDKV V+G G V+T                     P+   R KR + +PK+  DY
Sbjct: 621  PTLHLEDKVFVEGKGDVMTHGNEAKNCTKAEDCGSDFTSSPMLGNRPKRMKVRPKYFEDY 680


>dbj|GAU34024.1| hypothetical protein TSUD_393700 [Trifolium subterraneum]
          Length = 1192

 Score =  504 bits (1298), Expect = e-164
 Identities = 234/374 (62%), Positives = 299/374 (79%), Gaps = 2/374 (0%)
 Frame = +1

Query: 10   HLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTAV 189
            H PYGLLQPLP+P  +WE+ISLDFI+GLPSFQN+T VLV+VDRLSK+AHFGML  ++TA 
Sbjct: 770  HAPYGLLQPLPVPNRVWENISLDFIVGLPSFQNHTVVLVVVDRLSKAAHFGMLSTHYTAA 829

Query: 190  RVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEI 369
            +VA++F  MV  +HGMP+SIVSDRDP+F+S FWQELF+L GTKLRMS+AYHPQSDGQTEI
Sbjct: 830  KVAELFVVMVCKLHGMPRSIVSDRDPVFLSHFWQELFKLCGTKLRMSAAYHPQSDGQTEI 889

Query: 370  VNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVS 549
            VNK LQQYLRCFV ++P + G  LHWAEWHYN+  H++TG +P ++VYG+ PP L +Y+ 
Sbjct: 890  VNKILQQYLRCFVNQKPKQRGLYLHWAEWHYNSAIHTATGLSPFQVVYGRPPPALVDYIP 949

Query: 550  GATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHR 729
            G+T ++AVEATL DR+ +L  L+NKLLKAQ  MK  AD++R+PH F VG+LVFVKLRP R
Sbjct: 950  GSTQLQAVEATLMDRDMMLQELKNKLLKAQALMKDIADQRRIPHNFAVGNLVFVKLRPSR 1009

Query: 730  QRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAKP 909
            Q S+  +R HKLSKRYYGPF+L+K++GEVAFE++LPA SKIH V HVSQLKPC    +  
Sbjct: 1010 QVSVASKRIHKLSKRYYGPFKLIKAIGEVAFELELPATSKIHPVFHVSQLKPCYGDTSPT 1069

Query: 910  LKLPPTAVNNSPVIVPAAVLNSR--NRNDITEVLIQWEGLFPEDATWENFEELKLNYPSL 1083
            L+LP   V+N P+I P +V++ +        EVLIQWEG+FP+D+TWE+F ++ + YP  
Sbjct: 1070 LELPAEVVDNQPIIQPLSVIDWKWNAETQENEVLIQWEGMFPKDSTWESFHDIAVTYPHF 1129

Query: 1084 HLEDKVSVQGGPVV 1125
            HLEDKVS+ G  +V
Sbjct: 1130 HLEDKVSLHGPGIV 1143


>dbj|GAU26218.1| hypothetical protein TSUD_354400 [Trifolium subterraneum]
          Length = 1332

 Score =  470 bits (1210), Expect = e-150
 Identities = 217/327 (66%), Positives = 267/327 (81%)
 Frame = +1

Query: 10   HLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTAV 189
            HLPYGLL PLP+P+ +WEDISLDFI+GLPSFQ +T VLV+VDRLSK+AHFG LP +FTA 
Sbjct: 1004 HLPYGLLNPLPVPERVWEDISLDFIVGLPSFQTHTVVLVVVDRLSKTAHFGSLPTHFTAA 1063

Query: 190  RVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEI 369
            +VAD+FA+MV  +HGMPKSIVSDRDPIF+S FW+ELFRL+GTKLRMS+AYHPQSDGQTEI
Sbjct: 1064 KVADLFAQMVCKLHGMPKSIVSDRDPIFLSNFWKELFRLNGTKLRMSTAYHPQSDGQTEI 1123

Query: 370  VNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVS 549
            VNK LQQYLRCFV ++P  WG+ LHWAEWHYNT  H+STG +P ++VYG+ PP L  Y+ 
Sbjct: 1124 VNKVLQQYLRCFVHDKPKLWGQFLHWAEWHYNTAVHTSTGLSPYQVVYGRTPPALTEYIP 1183

Query: 550  GATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHR 729
            G + ++AV+A L DRE+VL +LRNKLLKAQ  MK YAD+KRVPH F+VGDLVFVKLRP+R
Sbjct: 1184 GTSKLQAVDAMLNDRETVLELLRNKLLKAQTVMKEYADQKRVPHQFKVGDLVFVKLRPYR 1243

Query: 730  QRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAKP 909
            Q S+  +R HKLSKRYYGPF+L++++G+VAFE++LP+ SKIH V HVSQLKPC       
Sbjct: 1244 QNSVLGRRFHKLSKRYYGPFKLIRAIGDVAFELELPSSSKIHHVFHVSQLKPCFGDMDVA 1303

Query: 910  LKLPPTAVNNSPVIVPAAVLNSRNRND 990
            + LP   ++N P I P  +L+ R   D
Sbjct: 1304 VDLPSDTIDNQPCIKPMVILDWRKTED 1330


>dbj|GAU36702.1| hypothetical protein TSUD_16140 [Trifolium subterraneum]
          Length = 1358

 Score =  453 bits (1165), Expect = e-143
 Identities = 208/298 (69%), Positives = 253/298 (84%)
 Frame = +1

Query: 10   HLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTAV 189
            H PYGLLQPLPIP  +WED+SLDFI+GLPSFQ++T +LV+VDR SK+AHFG LP +FTAV
Sbjct: 1049 HYPYGLLQPLPIPNRVWEDVSLDFIVGLPSFQSHTVILVVVDRFSKAAHFGSLPTHFTAV 1108

Query: 190  RVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEI 369
            RVAD+FAKM+  +HGMP+S+VSDRDPIF+S FWQELFRLSGTKLRMS+AYHPQSDGQTEI
Sbjct: 1109 RVADLFAKMICRLHGMPRSMVSDRDPIFLSHFWQELFRLSGTKLRMSTAYHPQSDGQTEI 1168

Query: 370  VNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVS 549
            VNK LQQYLRCFV ++P  WG+ LHWAEWHYNT TH+STG +P ++VYG+ PP L +Y+ 
Sbjct: 1169 VNKVLQQYLRCFVHDKPKHWGQFLHWAEWHYNTATHTSTGLSPFQVVYGRTPPALVDYIP 1228

Query: 550  GATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHR 729
            G++ I+AV+ATL DRE++L VL+ KLLKAQ  MK  AD  RV H F+VGDLVFVKLRP+R
Sbjct: 1229 GSSTIQAVDATLGDRETILQVLKTKLLKAQAVMKEQADMHRVHHQFKVGDLVFVKLRPYR 1288

Query: 730  QRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAA 903
            Q S+  +R HKLSKR+YGPF+L+K++GEVAFE++LP  S+IH V HVSQLKPC D  A
Sbjct: 1289 QNSVLGRRVHKLSKRFYGPFKLIKAIGEVAFELELPPSSRIHPVFHVSQLKPCFDENA 1346


>gb|PNX87538.1| hypothetical protein L195_g043629 [Trifolium pratense]
          Length = 343

 Score =  415 bits (1066), Expect = e-140
 Identities = 191/298 (64%), Positives = 242/298 (81%), Gaps = 2/298 (0%)
 Frame = +1

Query: 214  MVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTEIVNKALQQY 393
            MV  +HGMP+SIVSDRD IF+S+FW+ELFRLSGTKLRMSSAYHPQSDGQTEIVNK LQQY
Sbjct: 1    MVCKLHGMPRSIVSDRDAIFLSQFWKELFRLSGTKLRMSSAYHPQSDGQTEIVNKVLQQY 60

Query: 394  LRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYVSGATNIEAV 573
            LRCFV +QP KWG  LHWAEWHYNT  H+STGF+P ++VYG+ PP L +YV G+T ++AV
Sbjct: 61   LRCFVHDQPRKWGSFLHWAEWHYNTAVHTSTGFSPFQVVYGRAPPALVDYVPGSTALQAV 120

Query: 574  EATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPHRQRSLGVQR 753
            EATL +R+ +L +L+ KLLKAQ+TMK  AD+KR+PH F+ GDLVFVKLRP+RQ S+  +R
Sbjct: 121  EATLVERDEILQILKQKLLKAQETMKEIADQKRIPHKFKEGDLVFVKLRPYRQNSVAGRR 180

Query: 754  THKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAKPLKLPPTAV 933
             HKLSKR+YGP+++ +++GEVAF++DLP+ SKIH V H S LKPC D+ A+PL++P    
Sbjct: 181  IHKLSKRFYGPYKITQAIGEVAFKLDLPSASKIHPVFHASLLKPCFDSTAEPLEMPIETY 240

Query: 934  NNSPVIVPAAVLNSRNRND--ITEVLIQWEGLFPEDATWENFEELKLNYPSLHLEDKV 1101
             N PVI P AVL+ +  +    T+VLIQW+GLFPEDATWE++E++   YP  +LEDKV
Sbjct: 241  GNGPVIQPLAVLDWKEESSAGTTQVLIQWKGLFPEDATWEDYEDICTTYPEFNLEDKV 298


>gb|KYP64105.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 633

 Score =  419 bits (1077), Expect = e-137
 Identities = 210/436 (48%), Positives = 284/436 (65%), Gaps = 19/436 (4%)
 Frame = +1

Query: 1    IPTHLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNF 180
            +PT  P GLLQP+P P   WED+SLDFIIGLP +Q +T +LV+VDR SK  HFGMLP +F
Sbjct: 212  VPTQRPPGLLQPIPPPSRCWEDLSLDFIIGLPPYQGHTTILVVVDRFSKGVHFGMLPRSF 271

Query: 181  TAVRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQ 360
            TA +VAD+F  MV  +HG+P+S++SDRDPIF+S+FW+ELFRLSGTKLRMS+AYHPQ+DGQ
Sbjct: 272  TAAKVADLFTHMVCKLHGLPRSLISDRDPIFLSQFWRELFRLSGTKLRMSTAYHPQTDGQ 331

Query: 361  TEIVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLAN 540
            TE+ NK LQQYLRCFV  +PS WGKLL WAEW +NT+ +SSTG+TP E+++G  PP++  
Sbjct: 332  TEVTNKILQQYLRCFVHHRPSLWGKLLPWAEWCFNTSLNSSTGYTPFEVMFGHPPPSIPQ 391

Query: 541  YVSGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLR 720
             ++  T   A    +  RE ++  L + LLKAQ+ MK +AD  R    F VGD V+V+LR
Sbjct: 392  ILNTETTNAAAHFEVHSREEIMKKLHSNLLKAQENMKHWADSHRRDLSFDVGDWVYVRLR 451

Query: 721  PHRQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKD-- 894
            PHRQ S+  Q   KL KR++GPF++L+ +G VA+ +DLP  +KIH V H+S L+P     
Sbjct: 452  PHRQSSVTGQYLGKLQKRFFGPFRVLEKIGAVAYRLDLPPSAKIHNVFHISLLRPHHGPL 511

Query: 895  TAAKPLKLPPTAVNNSPVIVPAAVLNSRNRNDITE----VLIQWEGLFPEDATWENFEEL 1062
             +  PL LP    +N P++ P A+LN +  +D T     VLIQWEGL  E+A+WE + ++
Sbjct: 512  PSPPPLNLPQEIEDNQPILTPVAILNWKMSSDTTNPQKLVLIQWEGLPLEEASWEPWSQI 571

Query: 1063 KLNYPSLHLEDKVSVQG-------------GPVVTAQXXXXXXXXXXXXXXXXXXLPIPQ 1203
            +  +   HLEDKV++ G             GP++  Q                       
Sbjct: 572  QAQF---HLEDKVTLDGEGDVRPITDTTNVGPIIENQHAQESLEAG-------------- 614

Query: 1204 VRAKRNRTKPKWTRDY 1251
             R +R R+KP W +DY
Sbjct: 615  TRTQRIRSKPFWLKDY 630


>gb|KYP55632.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 934

 Score =  422 bits (1086), Expect = e-135
 Identities = 210/423 (49%), Positives = 283/423 (66%), Gaps = 6/423 (1%)
 Frame = +1

Query: 1    IPTHLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNF 180
            +PT  P GLLQP+P P   WED+SLDFIIGLP +Q +T +LV+VDR SK AHFGMLP +F
Sbjct: 513  VPTQRPLGLLQPIPPPSRCWEDLSLDFIIGLPPYQGHTTILVVVDRFSKGAHFGMLPRSF 572

Query: 181  TAVRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQ 360
            TA +VAD+F  MV  +HG+P+S++SDRDPIF+S+FW+ELFRLSGTKLRMS+AYHPQ+DGQ
Sbjct: 573  TAAKVADLFTHMVCKLHGLPRSLISDRDPIFLSQFWRELFRLSGTKLRMSTAYHPQTDGQ 632

Query: 361  TEIVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLAN 540
            TE+ NK LQQYLRCFV  +PS WGKLL WAEW +NT+ +SSTG+TP E+++G+ PP++  
Sbjct: 633  TEVTNKILQQYLRCFVHHRPSLWGKLLPWAEWCFNTSLNSSTGYTPFEVMFGRPPPSIPQ 692

Query: 541  YVSGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLR 720
             ++  T   A    +  RE ++T L + LLKAQ+ MK +AD  R    F VGD V+V+LR
Sbjct: 693  ILNTETTNAAAHFEVHSREEIMTKLHSNLLKAQENMKHWADSHRRDLSFDVGDWVYVRLR 752

Query: 721  PHRQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKD-- 894
            P RQ S+  Q   KL KR++GPF++L+ +G VA+ +DLP  +KIH V H+S L+P +   
Sbjct: 753  PRRQSSVTGQYLGKLQKRFFGPFRVLEKIGAVAYRLDLPPSAKIHNVFHISLLRPHQGPL 812

Query: 895  TAAKPLKLPPTAVNNSPVIVPAAVLNSRNRNDITE----VLIQWEGLFPEDATWENFEEL 1062
             +  PL LPP   +N P++ P A+LN +  +D       VLIQWEGL  E+A+WE + ++
Sbjct: 813  PSPPPLNLPPEIEDNQPILTPVAILNWKMSSDTPNPQQLVLIQWEGLPLEEASWEPWSQI 872

Query: 1063 KLNYPSLHLEDKVSVQGGPVVTAQXXXXXXXXXXXXXXXXXXLPIPQVRAKRNRTKPKWT 1242
            +  +   HLEDKV++ G   V                     L     R +R R KP W 
Sbjct: 873  QAQF---HLEDKVTLDGEGDVRPITDTTNVEPSIENQHAQESLE-TGTRTQRIRNKPFWL 928

Query: 1243 RDY 1251
            +DY
Sbjct: 929  KDY 931


>gb|KYP63409.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 423

 Score =  395 bits (1014), Expect = e-131
 Identities = 191/381 (50%), Positives = 265/381 (69%), Gaps = 5/381 (1%)
 Frame = +1

Query: 7    THLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTA 186
            T  P GLLQPLPIP  +WEDISLDF+ GLP     T +LV+VDR SK  H G L  +FTA
Sbjct: 22   TKCPGGLLQPLPIPTGVWEDISLDFVTGLPPSNGYTVLLVVVDRFSKGVHLGALRSDFTA 81

Query: 187  VRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTE 366
             +VA++F  +V   HG+PKSIVSDRDPIF+S+FW +LF+ SGT LRMSS+YHPQ+DGQTE
Sbjct: 82   YKVAELFVSIVCKHHGLPKSIVSDRDPIFISRFWSDLFKFSGTLLRMSSSYHPQTDGQTE 141

Query: 367  IVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYV 546
            ++N+ ++QYLR F  ++P+ W K L WAE+HYNT+ HS +G +P E++YGK PP++  YV
Sbjct: 142  VMNRTIEQYLRAFAHDKPTHWFKYLPWAEYHYNTSVHSGSGLSPFEVMYGKPPPSIPAYV 201

Query: 547  SGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPH 726
             G ++    ++TLA RE +L++L+  L KAQ  MK  AD KR    F VG  V++KL+P+
Sbjct: 202  EGTSSNIGCDSTLATREEILSLLKTNLAKAQARMKKIADSKRRDQTFAVGSWVYLKLQPY 261

Query: 727  RQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAK 906
            +Q S+  ++ HKL++R+YGPFQ+L+ VG VA+ V+LP+ SKIH V H S LKP +   + 
Sbjct: 262  KQISVSGEKYHKLAQRFYGPFQVLERVGPVAYRVELPSSSKIHNVFHCSMLKPHEGPVSA 321

Query: 907  PL-KLPPTAVNNSPVIVPAAVLNSR----NRNDITEVLIQWEGLFPEDATWENFEELKLN 1071
             + +LPP+ V+N+P++ P A+L  +    N       L+QW GL P+D +WEN+ ELK  
Sbjct: 322  LIDQLPPSFVDNNPLVTPLAILAFKTVPVNGTPTKFALVQWHGLSPDDTSWENWLELKSF 381

Query: 1072 YPSLHLEDKVSVQGGPVVTAQ 1134
            Y    LEDKV  +G  +VT +
Sbjct: 382  Y---DLEDKVVAEGDGIVTCE 399


>gb|KYP55262.1| Retrotransposable element Tf2, partial [Cajanus cajan]
          Length = 445

 Score =  395 bits (1015), Expect = e-131
 Identities = 202/425 (47%), Positives = 277/425 (65%), Gaps = 10/425 (2%)
 Frame = +1

Query: 7    THLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTA 186
            T  P GLLQPLPIP  IWED+SLDFI  LP  +  TAVLV+VD  SK  HFG LP +F+A
Sbjct: 42   TKKPAGLLQPLPIPSAIWEDLSLDFITCLPPSRGYTAVLVVVDHFSKGVHFGPLPTHFSA 101

Query: 187  VRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTE 366
             +VA +F  MV  +HG P+S+VSDRDPIF+S FW++LF+LSGTKLRMS++YHP+++GQTE
Sbjct: 102  FKVAQLFLDMVCKLHGFPRSLVSDRDPIFISHFWRDLFKLSGTKLRMSTSYHPETNGQTE 161

Query: 367  IVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYV 546
            ++N+ L+QYLR FV + PSKW   L  AEW YNT+ HS TG TP E+ YGK PPT+++Y+
Sbjct: 162  VINRVLEQYLRSFVHDHPSKWSNFLALAEWSYNTSVHSGTGLTPFEVTYGKPPPTISHYL 221

Query: 547  SGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPH 726
             G++++EAV+  LA RE++ + L ++L KAQ  MK  AD KR    + VGD V+VKLRP+
Sbjct: 222  LGSSSVEAVDNLLATREAIHSSLLHRLTKAQSAMKLIADAKRRDVSYSVGDWVYVKLRPY 281

Query: 727  RQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDTAAK 906
            RQ+S+   + HKLSKR+YGPFQ+L+ +G VA+ + LPA SKIH V H S LKP K     
Sbjct: 282  RQQSILGSQFHKLSKRFYGPFQILERIGAVAYRLQLPASSKIHPVFHCSLLKPHKGLITP 341

Query: 907  PL-KLPPTAVNNSPVIVPAAVLNSRNRNDITE----VLIQWEGLFPEDATWENFEELKLN 1071
             L  LPP A +N P++ P ++L S+           VL+QW GL PED +WE +++++  
Sbjct: 342  QLAPLPPYATDNHPLVEPFSILASKVDTSTFPPTKLVLVQWSGLAPEDTSWEKWDDIQST 401

Query: 1072 YPSLHLEDKVSV-----QGGPVVTAQXXXXXXXXXXXXXXXXXXLPIPQVRAKRNRTKPK 1236
            +    LEDK+ +        P+++A                    P    R KR+  +P 
Sbjct: 402  F---QLEDKLLLPAEGNDSNPIISA-------------------TPAHDARPKRHTRRPN 439

Query: 1237 WTRDY 1251
            +  D+
Sbjct: 440  YLNDF 444


>gb|PNX92763.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1410

 Score =  417 bits (1073), Expect = e-129
 Identities = 203/375 (54%), Positives = 277/375 (73%), Gaps = 5/375 (1%)
 Frame = +1

Query: 7    THLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTA 186
            T  P GLLQPLP+P  IWED+SLDFI GLP     T +LV+VDR SK AHFG LP +F+A
Sbjct: 994  TKKPAGLLQPLPVPSAIWEDLSLDFITGLPPSHGFTVILVVVDRFSKGAHFGALPSSFSA 1053

Query: 187  VRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTE 366
             +VA +F  ++   HG+P+S+VSDRDPIF+S+FW+ELF+LSGTKLRMS++YHP++DGQTE
Sbjct: 1054 YKVAALFLDIICKHHGLPRSLVSDRDPIFISRFWRELFKLSGTKLRMSTSYHPETDGQTE 1113

Query: 367  IVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYV 546
            ++N+ L+QYLR FV  +P+ W + L  AEW YNTT+HS+TG +P EI +GK PP++ +Y+
Sbjct: 1114 VLNRILEQYLRSFVHSKPTHWHQFLPLAEWSYNTTSHSATGRSPFEITFGKPPPSIPSYL 1173

Query: 547  SGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPH 726
             G++N+EAV+  L  R+  +T+L+ KLLKAQ+TMK YAD+KR    + VGD V+VKLRP+
Sbjct: 1174 LGSSNVEAVDTLLTTRQHTITLLQRKLLKAQETMKFYADQKRRELSYAVGDFVYVKLRPY 1233

Query: 727  RQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCK-DTAA 903
            RQ+SL      KLSKR+YGP+++++ +G VA++++LP QSKIH V H S LK  +    A
Sbjct: 1234 RQQSLTGSTYSKLSKRFYGPYKIVERIGPVAYKLELPPQSKIHPVFHCSLLKQHRGPLTA 1293

Query: 904  KPLKLPPTAVNNSPVIVPAAVLNSRNRNDIT----EVLIQWEGLFPEDATWENFEELKLN 1071
             P  LPP+ V+N PVI P A+L+SR  ++I     +VL+QW GL PEDATWE++  L  N
Sbjct: 1294 APDDLPPSNVDNQPVIQPLAILDSRTDHNINPPQRQVLVQWLGLLPEDATWEDWNTLNSN 1353

Query: 1072 YPSLHLEDKVSVQGG 1116
            +   HLEDKV+   G
Sbjct: 1354 F---HLEDKVNFPAG 1365


>dbj|GAU41853.1| hypothetical protein TSUD_366000 [Trifolium subterraneum]
          Length = 1524

 Score =  419 bits (1076), Expect = e-129
 Identities = 200/375 (53%), Positives = 278/375 (74%), Gaps = 5/375 (1%)
 Frame = +1

Query: 7    THLPYGLLQPLPIPQHIWEDISLDFIIGLPSFQNNTAVLVIVDRLSKSAHFGMLPGNFTA 186
            T  P GLLQPLP+P  IWED+SLDFI GLP     T +LV+VDR SK AHFG LP +F+A
Sbjct: 1089 TKKPAGLLQPLPVPSAIWEDLSLDFITGLPPSHGFTVILVVVDRFSKGAHFGALPSSFSA 1148

Query: 187  VRVADMFAKMVSCVHGMPKSIVSDRDPIFMSKFWQELFRLSGTKLRMSSAYHPQSDGQTE 366
             +VA +F  ++   HG+P+S+VSDRDPIF+S+FW+ELF+LSGTKLRMS++YHP++DGQTE
Sbjct: 1149 YKVAALFLDIICKYHGLPRSLVSDRDPIFISRFWRELFKLSGTKLRMSTSYHPETDGQTE 1208

Query: 367  IVNKALQQYLRCFVFEQPSKWGKLLHWAEWHYNTTTHSSTGFTPIEIVYGKKPPTLANYV 546
            ++N+ L+QYLR FV  +P++W + L  AEW YNTT+HS+TG +P E+ +GK PP++ +Y+
Sbjct: 1209 VLNRILEQYLRSFVHSKPNRWHQFLPLAEWSYNTTSHSATGRSPFEVTFGKPPPSIPSYL 1268

Query: 547  SGATNIEAVEATLADRESVLTVLRNKLLKAQQTMKGYADKKRVPHPFQVGDLVFVKLRPH 726
             G++N+EAV+  L  R+  +TVL+ KLLKAQ+ MK YADKKR    + VGD V+VKLRP+
Sbjct: 1269 LGSSNVEAVDTLLTTRQQTITVLQRKLLKAQEKMKFYADKKRRELSYVVGDFVYVKLRPY 1328

Query: 727  RQRSLGVQRTHKLSKRYYGPFQLLKSVGEVAFEVDLPAQSKIHRVLHVSQLKPCKDT-AA 903
            RQ+SL      KLSKR+YGP+++++ +G VA++++LP QSKIH V H S LK  + +  A
Sbjct: 1329 RQQSLTGSTCSKLSKRFYGPYKIVECIGPVAYKLELPPQSKIHPVFHCSLLKQHRGSLTA 1388

Query: 904  KPLKLPPTAVNNSPVIVPAAVLNSRNRNDIT----EVLIQWEGLFPEDATWENFEELKLN 1071
             P  LPP+ ++N PVI P A+L+S+  + +T    +VL+QW GL PED TWE+++ L  N
Sbjct: 1389 APDDLPPSNIDNQPVIQPLAILDSKMDHSVTPPQRQVLVQWLGLLPEDTTWEDWDTLNSN 1448

Query: 1072 YPSLHLEDKVSVQGG 1116
            +   HLEDKV+   G
Sbjct: 1449 F---HLEDKVNFPAG 1460