BLASTX nr result
ID: Astragalus23_contig00011917
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00011917
(751 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo... 361 e-123
gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposo... 338 e-114
gb|PNX66338.1| retrovirus-related Pol polyprotein from transposo... 328 e-111
gb|PNX77046.1| retrovirus-related Pol polyprotein from transposo... 333 e-109
gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposo... 333 e-109
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo... 333 e-109
gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposo... 323 e-108
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 340 e-108
gb|KYP52266.1| Retrovirus-related Pol polyprotein from transposo... 321 e-108
gb|PNX92906.1| retrovirus-related Pol polyprotein from transposo... 346 e-108
gb|PNX84939.1| retrovirus-related Pol polyprotein from transposo... 329 e-107
gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposo... 328 e-107
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 342 e-107
gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposo... 327 e-107
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo... 345 e-106
gb|PNX59503.1| retrovirus-related Pol polyprotein from transposo... 319 e-106
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo... 325 e-106
gb|KYP51570.1| Retrovirus-related Pol polyprotein from transposo... 323 e-105
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo... 343 e-105
gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposo... 321 e-105
>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 293
Score = 361 bits (927), Expect = e-123
Identities = 170/235 (72%), Positives = 201/235 (85%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TRSK+GIV+P++HPTLLLTT EP S QALS P WK AM EYDALI+N TW+LVPLP
Sbjct: 1 MQTRSKSGIVRPKLHPTLLLTTTEPTSLKQALSSPSWKTAMSLEYDALIKNQTWTLVPLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
++R VG KWV+RIKEN DGTINKYKARLVAKGF+Q+ G DYSETF+PVIKPIT+R+ILT
Sbjct: 61 SNRTVVGCKWVYRIKENQDGTINKYKARLVAKGFHQKFGCDYSETFSPVIKPITIRVILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
L +T+ W IKQ+DINNAFLNGFLEE+VYM QP GFE+ DK+LVCKL+KA+YGLKQAPRAW
Sbjct: 121 LDVTYHWPIKQVDINNAFLNGFLEEDVYMMQPPGFEVSDKTLVCKLNKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
Y+RLTKTL+ FGFV S+CD SLL+Y + CIY L+YVDDII+TG+S + VQS I
Sbjct: 181 YDRLTKTLLGFGFVQSRCDPSLLIYKQSQVCIYMLIYVDDIIVTGNSHSLVQSFI 235
>gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 269
Score = 338 bits (866), Expect = e-114
Identities = 158/235 (67%), Positives = 192/235 (81%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TR+K+GIV+PR+ PTLLLT EP + QALS P W AMQ+EY+AL+ N TWSLVPLP
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTTKQALSNPTWSAAMQTEYNALLHNDTWSLVPLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
R A+G KWVFR+KEN +GT+ KYKARLVAKGFNQ+ G DY ETF+PVIKP+TVR+ILT
Sbjct: 61 PHRTAIGCKWVFRVKENPNGTVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LALTH+W I+Q+D+NNAFLNG LEEEVYM+QP GFE DK+LVCKLHKA+YGLKQAPRAW
Sbjct: 121 LALTHRWPIQQLDVNNAFLNGTLEEEVYMTQPPGFEASDKNLVCKLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+++L TL+ F ASKCD SL VY+H IY LVYVDDIIITG++ T + +++
Sbjct: 181 FDKLKSTLLQLNFYASKCDPSLFVYSHANNVIYILVYVDDIIITGNNSTILHTLV 235
>gb|PNX66338.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 258
Score = 328 bits (841), Expect = e-111
Identities = 153/235 (65%), Positives = 191/235 (81%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M+TR+K G ++P+ L + EP + AL+ P W +AMQ+EY AL N TWSLVPLP
Sbjct: 1 MVTRAKTGNLKPKT----FLASIEPTNIKNALADPHWLKAMQAEYKALQDNNTWSLVPLP 56
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
+KA+G KW+FR+KEN DG+INKYKARLVAKGF+Q G D++ETF+PVIKP+T+RIILT
Sbjct: 57 PHKKAIGCKWIFRVKENPDGSINKYKARLVAKGFHQTPGFDFTETFSPVIKPVTIRIILT 116
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LA+T+KWS++QIDINNAFLNG L+EEVYM+QP GFE DK+LVCKLHKALYGLKQAPRAW
Sbjct: 117 LAVTYKWSVQQIDINNAFLNGLLQEEVYMTQPTGFENSDKTLVCKLHKALYGLKQAPRAW 176
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
YERLT+TL+ GF+ SKCD SLLV+ NG C Y L+YVDDI+ITGS+P ++ +I
Sbjct: 177 YERLTQTLLQMGFIKSKCDPSLLVHHQNGACTYVLIYVDDILITGSAPHLIKDLI 231
>gb|PNX77046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 515
Score = 333 bits (854), Expect = e-109
Identities = 157/239 (65%), Positives = 190/239 (79%)
Frame = +3
Query: 30 NTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSL 209
N H MITR+K G ++P+ T+ EP + AL+ P+W QAMQ+E+ AL N TWSL
Sbjct: 70 NDHSMITRAKTGHLKPKAFTTIF----EPTTVKSALADPQWLQAMQTEFKALTDNNTWSL 125
Query: 210 VPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVR 389
VPLP +KA+G KW+FRIKEN DGTINKYKARLVAKGF Q G D++ETF+PVIKP+T+R
Sbjct: 126 VPLPPHKKAIGCKWIFRIKENPDGTINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIR 185
Query: 390 IILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQA 569
IILTLA+T+KW ++QIDINNAFLNG L EEVYM+QP GFE DKSLVCKLHK+LYGLKQA
Sbjct: 186 IILTLAVTYKWPVQQIDINNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYGLKQA 245
Query: 570 PRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
PRAWYERLT+TL+ GF+ASKCD SL+V G C Y L+YVDDI+ITGS+P +Q +I
Sbjct: 246 PRAWYERLTQTLLQMGFIASKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQDVI 304
>gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 333 bits (855), Expect = e-109
Identities = 158/235 (67%), Positives = 190/235 (80%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TR+K+GIV+PR+ PTLLLT EP + QALS P W AMQ+EY+AL+ NGTWSLVPLP
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTTKQALSNPTWTAAMQTEYNALLHNGTWSLVPLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
R A+G KWVFR+KEN +GT+ KYKA LVAKGFNQ+ G DY ETF+PVIKP+TVR+ILT
Sbjct: 61 PHRTAIGCKWVFRVKENPNGTVQKYKACLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LALTH W I+Q+D+NNAFLNG LEEEVYM+QP GFE DK LVCKLHKA+YGLKQAPRAW
Sbjct: 121 LALTHHWPIQQLDVNNAFLNGTLEEEVYMTQPPGFEASDKCLVCKLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+E+L TL+ F F ASKCD SL VY+H IY LVYVDDIIIT ++ + + +++
Sbjct: 181 FEKLKSTLLQFHFQASKCDPSLFVYSHANNVIYILVYVDDIIITSNNSSILHTLV 235
>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 538
Score = 333 bits (855), Expect = e-109
Identities = 156/235 (66%), Positives = 194/235 (82%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TR+K GIV+PR+ PTLLLT EP + QAL+ W AM+ EY+AL+ NGTW+LV LP
Sbjct: 1 MTTRAKAGIVKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
++ A+G KWVFRIKENSDGT+NKYKARLVAKGF+Q+ G+DY+ETF+PV+KP+T+R+ILT
Sbjct: 61 PNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LALTH WSI+Q+D+NNAFLNG L+EEVYMSQP GFE DK+LVCKLHKA+YGLKQAPRAW
Sbjct: 121 LALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFESSDKTLVCKLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+++L TL F SKCD SL VY+H+ IY LVYVDDIIITG++ + +Q+II
Sbjct: 181 FDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSSTLQNII 235
>gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 282
Score = 323 bits (828), Expect = e-108
Identities = 154/235 (65%), Positives = 185/235 (78%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TR+K+GIV+PR+ PTLLLT EP + QALS W MQ+EY+AL+ N TWSLV LP
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTIKQALSNSTWSAVMQTEYNALLSNDTWSLVHLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
R A+G KWVF IKEN DGT+ KYKARLV KGFNQ+ G DY+ETFAPVIK +T+R+ILT
Sbjct: 61 PHRTAIGCKWVFCIKENPDGTVQKYKARLVTKGFNQQFGFDYNETFAPVIKLVTIRLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LALTH W ++Q+DINNAFLNG L+EEVYM+QP GFE DK+LVCKLHKA+YGLKQAPRAW
Sbjct: 121 LALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+E+L TL+ F F ASKCD SL VY+H IY LVYVDDIIIT + T + +++
Sbjct: 181 FEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDSTLLHTLV 235
>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 839
Score = 340 bits (871), Expect = e-108
Identities = 162/248 (65%), Positives = 199/248 (80%), Gaps = 3/248 (1%)
Frame = +3
Query: 12 PPHL---PTNTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDA 182
P H+ P N HPM TR+K GIV+PR+ PTLLLT EP + QAL+ W AM+ EY+A
Sbjct: 501 PTHVEAPPINLHPMTTRAKAGIVKPRLQPTLLLTHFEPKNTKQALASDTWLAAMKQEYNA 560
Query: 183 LIQNGTWSLVPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFA 362
L+ NGTW+LVPLP+ R A+G KWVFRIKEN DGT++K+KARLVAKGF+Q+ G DY+ETF+
Sbjct: 561 LMANGTWTLVPLPSHRTAIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGFDYTETFS 620
Query: 363 PVIKPITVRIILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLH 542
PV+KP+T+R+ILTLALTH WSI+Q+D+NNAFLNG LEEEVYMSQP GFE DKSLVCKLH
Sbjct: 621 PVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLEEEVYMSQPPGFESSDKSLVCKLH 680
Query: 543 KALYGLKQAPRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSS 722
KA+YGLKQAPRAW+++L TL F SKCD SL VY+H IY LVYVDDIIITG++
Sbjct: 681 KAIYGLKQAPRAWFDKLKATLFHLNFQISKCDPSLFVYSHANNVIYILVYVDDIIITGNN 740
Query: 723 PTAVQSII 746
T +++I+
Sbjct: 741 TTFLRNIV 748
>gb|KYP52266.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 244
Score = 321 bits (822), Expect = e-108
Identities = 150/235 (63%), Positives = 188/235 (80%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TR+K GIV+PR+ PTLLL EP + QAL+ W AM+ EY+AL+ NGTW+LV LP
Sbjct: 1 MTTRAKAGIVKPRLQPTLLLIDVEPKNTKQALANDTWLAAMKQEYNALLDNGTWTLVSLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
++R +G KW+FR+KEN DGTI+KYKARLVAKGF+Q+ G DY+ETF+PV+KP+T+RIILT
Sbjct: 61 SNRTVIGCKWIFRVKENPDGTIHKYKARLVAKGFHQQYGYDYNETFSPVVKPVTIRIILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LALTH W I+Q+D+NNA +NG LEEEVYMSQP GFE DK+LVCKLHK +YGLKQAPRAW
Sbjct: 121 LALTHHWPIQQLDVNNALINGNLEEEVYMSQPLGFESSDKNLVCKLHKEIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+++L TL F SKCD SL VY+H+ IY LVYVDDIIITG++ + +Q+II
Sbjct: 181 FDKLKATLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSSILQNII 235
>gb|PNX92906.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1196
Score = 346 bits (888), Expect = e-108
Identities = 160/245 (65%), Positives = 197/245 (80%)
Frame = +3
Query: 12 PPHLPTNTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQ 191
PPH +N HPM+TR K G ++P++ L + EP S AL+ P+W +AMQSEY AL+
Sbjct: 654 PPHPISNNHPMVTRGKTGNLKPKV----LTASIEPTSVRAALNDPQWLKAMQSEYKALMD 709
Query: 192 NGTWSLVPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVI 371
N TWSLV LP +KA+G KW+FR+KEN DGT+NKYKARLVAKGF Q G D+ ETF+PVI
Sbjct: 710 NNTWSLVSLPPHKKAIGCKWIFRVKENPDGTVNKYKARLVAKGFLQTPGFDFKETFSPVI 769
Query: 372 KPITVRIILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKAL 551
KP T+RIILTLA+T+KW+++QID+NNAFLNG L+EEVYMSQP GFE+ DKSLVCKLHK+L
Sbjct: 770 KPTTIRIILTLAVTYKWAVQQIDVNNAFLNGLLQEEVYMSQPSGFEVADKSLVCKLHKSL 829
Query: 552 YGLKQAPRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTA 731
YGLKQAPRAWYERLT+TL+ GFVASKCD SLL++ G C Y L+YVDDI+ITGS+P
Sbjct: 830 YGLKQAPRAWYERLTQTLLQMGFVASKCDPSLLIHHQQGACTYVLIYVDDILITGSAPHL 889
Query: 732 VQSII 746
+Q +I
Sbjct: 890 IQDLI 894
>gb|PNX84939.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 499
Score = 329 bits (843), Expect = e-107
Identities = 156/239 (65%), Positives = 189/239 (79%)
Frame = +3
Query: 30 NTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSL 209
N H MITR+K G ++ + T+ EP + AL+ P+W QAMQ+E+ AL N TWSL
Sbjct: 54 NYHSMITRAKTGHLKLKAFTTIF----EPTTVKSALADPQWLQAMQTEFKALTDNNTWSL 109
Query: 210 VPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVR 389
VPLP +KA+G KW+FRIKEN DGTINKYKARLVAKGF Q G D++ETF+PVIKP+T+R
Sbjct: 110 VPLPPHKKAIGCKWIFRIKENPDGTINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIR 169
Query: 390 IILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQA 569
IILTLA+T+KW ++QIDINNAFLNG L EEVYM+QP GFE DKSLVCKLHK+LYGLKQA
Sbjct: 170 IILTLAVTYKWPVQQIDINNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYGLKQA 229
Query: 570 PRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
PRAWYERLT+TL+ GF+ASKCD SL+V G C Y L+YVDDI+ITGS+P +Q +I
Sbjct: 230 PRAWYERLTQTLLQMGFIASKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQDVI 288
>gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 482
Score = 328 bits (841), Expect = e-107
Identities = 153/235 (65%), Positives = 192/235 (81%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M+TR+K+GIV+PR+ PTLLLT EP + QALS W AMQ+E++ L+ NGTWSLVPLP
Sbjct: 1 MVTRAKDGIVKPRLQPTLLLTRTEPKTTRQALSDSTWFAAMQAEHNTLLHNGTWSLVPLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
+R +G KWVFR+KEN D T++KYKARLVAKGF+Q+ G DY+ETF+PVIKP+TVR+ILT
Sbjct: 61 PNRTPIGCKWVFRVKENLDATVHKYKARLVAKGFHQQFGYDYNETFSPVIKPVTVRLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
L LTH+W +KQ+D+NNAFLNG L EEVYM+QP GFE DK+LVC+LHKA+YGLKQAPRAW
Sbjct: 121 LVLTHRWPLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+E+L TL+ F F ASKCD SL VY+ + IY LVYVDDIIITG++ +QS++
Sbjct: 181 FEKLKSTLLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIVLQSLV 235
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 342 bits (878), Expect = e-107
Identities = 158/241 (65%), Positives = 194/241 (80%)
Frame = +3
Query: 24 PTNTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTW 203
P N HPM TR+K+GIV+PR+ PTLLLT EP + QALS P W AMQ+EY+AL+ N TW
Sbjct: 531 PHNVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTW 590
Query: 204 SLVPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPIT 383
SLVPLP R A+G KWVFR+KEN +G++ KYKARLVAKGFNQ+ G DY ETF+PVIKP+T
Sbjct: 591 SLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVT 650
Query: 384 VRIILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLK 563
VR+ILTLALTH+W I+Q+D+NNAFLNG LEEEVYM QP GFE DK+LVCKLHKA+YGLK
Sbjct: 651 VRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDKNLVCKLHKAIYGLK 710
Query: 564 QAPRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSI 743
QAPRAW+++L TL+ F ASKCD SL +Y+ IY LVYVDDIIITG++ + + ++
Sbjct: 711 QAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNSSILHTL 770
Query: 744 I 746
+
Sbjct: 771 V 771
>gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 482
Score = 327 bits (837), Expect = e-107
Identities = 152/235 (64%), Positives = 191/235 (81%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M+TR+K+GIV+PR+ PTLLLT EP + QALS W AMQ+E++ L+ NGTWSLVPLP
Sbjct: 1 MVTRAKDGIVKPRLQPTLLLTRTEPKTTRQALSDSTWFAAMQAEHNTLLHNGTWSLVPLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
+R +G KWVFR+KEN D T++KYKARLVAKGF+Q+ G DY+ETF+PVIKP+T R+ILT
Sbjct: 61 PNRTPIGCKWVFRVKENLDATVHKYKARLVAKGFHQQFGYDYNETFSPVIKPVTARLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
L LTH+W +KQ+D+NNAFLNG L EEVYM+QP GFE DK+LVC+LHKA+YGLKQAPRAW
Sbjct: 121 LVLTHRWPLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+E+L TL+ F F ASKCD SL VY+ + IY LVYVDDIIITG++ +QS++
Sbjct: 181 FEKLKSTLLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIVLQSLV 235
>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1434
Score = 345 bits (884), Expect = e-106
Identities = 164/250 (65%), Positives = 196/250 (78%), Gaps = 3/250 (1%)
Frame = +3
Query: 6 APPPHLPT---NTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEY 176
A PP PT N HPM+TR K G ++P+ + EP S ALS P W QAMQSEY
Sbjct: 945 ANPPTSPTSKHNKHPMVTRGKTGSLKPKA----FIAKLEPTSVKHALSDPNWSQAMQSEY 1000
Query: 177 DALIQNGTWSLVPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSET 356
AL+ N TWSLVPLP RKA+G KW+FRIKEN DGT+NKYKARLVAKGF Q G D++ET
Sbjct: 1001 KALMDNNTWSLVPLPPHRKAIGCKWIFRIKENPDGTVNKYKARLVAKGFLQTPGFDFTET 1060
Query: 357 FAPVIKPITVRIILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCK 536
F+PVIKP+T+RIILTLA+T+KW+++QID+NNAFLNG L+EEVYM+QP GFE D+SLVCK
Sbjct: 1061 FSPVIKPVTIRIILTLAVTYKWTVQQIDVNNAFLNGVLQEEVYMTQPVGFEASDRSLVCK 1120
Query: 537 LHKALYGLKQAPRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITG 716
LHK+LYGLKQAPRAWYERLT+ L+ GFVASKCD SLLV+ G C Y L+YVDDI+ITG
Sbjct: 1121 LHKSLYGLKQAPRAWYERLTQALLQLGFVASKCDPSLLVHHQQGACTYVLIYVDDILITG 1180
Query: 717 SSPTAVQSII 746
S+P +Q +I
Sbjct: 1181 SAPHLIQDVI 1190
>gb|PNX59503.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 340
Score = 319 bits (818), Expect = e-106
Identities = 153/230 (66%), Positives = 179/230 (77%)
Frame = +3
Query: 24 PTNTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTW 203
P N+H M TR K GIVQPR++PTLLLT EP QA+ P+W QAM+ EYDAL+ N TW
Sbjct: 111 PQNSHSMTTRGKLGIVQPRLNPTLLLTHVEPTGYKQAMQHPQWLQAMKCEYDALLTNNTW 170
Query: 204 SLVPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPIT 383
SLV LP R +G KWVFR+K+N DGTINKYKARLVAKGF+Q+ G DY+ETF+PV+KP+T
Sbjct: 171 SLVTLPEDRHPIGCKWVFRLKQNPDGTINKYKARLVAKGFHQKHGFDYTETFSPVVKPVT 230
Query: 384 VRIILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLK 563
VR +LTLA+T+KW I+Q+D+NNAFLNG L+EEVYM QP GFE DK+LVCKL KALYGLK
Sbjct: 231 VRTVLTLAVTNKWCIQQLDVNNAFLNGLLDEEVYMVQPPGFEATDKTLVCKLQKALYGLK 290
Query: 564 QAPRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIIT 713
QAPRAW+ERL L GFV SKCD SL N I+ LVYVDDIIIT
Sbjct: 291 QAPRAWFERLRSALTKLGFVPSKCDPSLFTLHANHHTIFLLVYVDDIIIT 340
>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 535
Score = 325 bits (833), Expect = e-106
Identities = 150/235 (63%), Positives = 188/235 (80%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M+TR K G ++P++ L EP + AL+ PKW AMQ+EY AL+ N TWSLVPLP
Sbjct: 1 MVTRGKTGNLKPKVFTVSL----EPTTIKAALTDPKWLHAMQNEYKALMDNNTWSLVPLP 56
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
+KA+G KW+FR+KENSDGT+NK+KARLVAKGF Q G D++ETF+PVIKPIT+R+ILT
Sbjct: 57 PHKKAIGCKWIFRVKENSDGTVNKFKARLVAKGFLQTPGFDFTETFSPVIKPITIRVILT 116
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LA+T+KW ++QID+NNAFLNG+L+EEVYM QP GFE DKSLVCKLHK+LYGLKQAPRAW
Sbjct: 117 LAVTYKWPVQQIDVNNAFLNGWLQEEVYMKQPAGFESSDKSLVCKLHKSLYGLKQAPRAW 176
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
YERLT+ L+ GFV SKCD SLL++ G C Y L+YVDDI+ITGS+P ++ +I
Sbjct: 177 YERLTQALLQMGFVTSKCDPSLLIHYQQGACTYVLIYVDDILITGSAPHLIKDLI 231
>gb|KYP51570.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 481
Score = 323 bits (828), Expect = e-105
Identities = 154/235 (65%), Positives = 185/235 (78%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TR+K+GIV+PR+ PTLLLT EP + QALS W MQ+EY+AL+ N TWSLV LP
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTIKQALSNSTWSAVMQTEYNALLSNDTWSLVHLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
R A+G KWVF IKEN DGT+ KYKARLV KGFNQ+ G DY+ETFAPVIK +T+R+ILT
Sbjct: 61 PHRTAIGCKWVFCIKENPDGTVQKYKARLVTKGFNQQFGFDYNETFAPVIKLVTIRLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LALTH W ++Q+DINNAFLNG L+EEVYM+QP GFE DK+LVCKLHKA+YGLKQAPRAW
Sbjct: 121 LALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+E+L TL+ F F ASKCD SL VY+H IY LVYVDDIIIT + T + +++
Sbjct: 181 FEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDSTLLHTLV 235
>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1429
Score = 343 bits (880), Expect = e-105
Identities = 162/245 (66%), Positives = 195/245 (79%)
Frame = +3
Query: 15 PHLPTNTHPMITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQN 194
P TNTH M+TRSK G ++P + PT+ LTT EP + QALS W +AMQ EY AL N
Sbjct: 883 PSPTTNTHHMLTRSKTGHLKPPLFPTINLTTTEPTTVQQALSSIHWTEAMQQEYQALQAN 942
Query: 195 GTWSLVPLPASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIK 374
TWSLVPLP ++A+G KW+FRIKEN DGTINKYKARLVAKGFNQ+ G DYS+T++PV+K
Sbjct: 943 KTWSLVPLPPHKRAIGCKWIFRIKENPDGTINKYKARLVAKGFNQKYGQDYSDTYSPVVK 1002
Query: 375 PITVRIILTLALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALY 554
PITVR +LT+ALT KW + Q+D+NNAFLNG L E+VYM QPQGF G+ +LVCKLHKA+Y
Sbjct: 1003 PITVRTVLTIALTSKWPLIQLDVNNAFLNGQLHEDVYMQQPQGFIQGESTLVCKLHKAIY 1062
Query: 555 GLKQAPRAWYERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAV 734
GLKQAPRAWYE LT TLISFGF SKCD SLL++ +GCC+ L+YVDDIIITGSS TA+
Sbjct: 1063 GLKQAPRAWYESLTNTLISFGFQQSKCDPSLLIFNKHGCCLLILIYVDDIIITGSSNTAI 1122
Query: 735 QSIID 749
I++
Sbjct: 1123 NLIVN 1127
>gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 437
Score = 321 bits (823), Expect = e-105
Identities = 154/235 (65%), Positives = 184/235 (78%)
Frame = +3
Query: 42 MITRSKNGIVQPRIHPTLLLTTAEPNSANQALSCPKWKQAMQSEYDALIQNGTWSLVPLP 221
M TR+K+GIV+PR PTLLLT EP + QALS W MQ+EY+AL+ N TWSLV LP
Sbjct: 1 MTTRAKDGIVKPRPQPTLLLTHVEPKTIKQALSNSTWSAVMQTEYNALLSNDTWSLVHLP 60
Query: 222 ASRKAVGSKWVFRIKENSDGTINKYKARLVAKGFNQREGTDYSETFAPVIKPITVRIILT 401
R A+G KWVF IKEN DGT+ KYKARLV KGFNQ+ G DY+ETFAPVIK +T+R+ILT
Sbjct: 61 PHRTAIGCKWVFCIKENPDGTVQKYKARLVTKGFNQQFGFDYNETFAPVIKLVTIRLILT 120
Query: 402 LALTHKWSIKQIDINNAFLNGFLEEEVYMSQPQGFEIGDKSLVCKLHKALYGLKQAPRAW 581
LALTH W ++Q+DINNAFLNG L+EEVYM+QP GFE DK+LVCKLHKA+YGLKQAPRAW
Sbjct: 121 LALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHKAIYGLKQAPRAW 180
Query: 582 YERLTKTLISFGFVASKCDSSLLVYAHNGCCIYTLVYVDDIIITGSSPTAVQSII 746
+E+L TL+ F F ASKCD SL VY+H IY LVYVDDIIIT + T + +++
Sbjct: 181 FEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDSTLLHTLV 235