BLASTX nr result
ID: Astragalus23_contig00011713
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00011713
(400 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU44918.1| hypothetical protein TSUD_25810 [Trifolium subte... 62 2e-08
ref|XP_012570330.1| PREDICTED: RNA polymerase sigma factor sigF,... 61 4e-08
ref|XP_003590454.2| RNA polymerase sigma factor [Medicago trunca... 61 4e-08
ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF,... 61 4e-08
gb|PNY07884.1| RNA polymerase sigma factor sigF chloroplastic-li... 58 4e-07
dbj|GAV75806.1| Sigma70_r3 domain-containing protein/Sigma70_r2 ... 58 5e-07
gb|PON60336.1| RNA polymerase sigma factor [Parasponia andersonii] 58 5e-07
gb|KJB36542.1| hypothetical protein B456_006G165200 [Gossypium r... 57 9e-07
ref|XP_017603241.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
ref|XP_012485939.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
gb|KJB36540.1| hypothetical protein B456_006G165200 [Gossypium r... 57 9e-07
ref|XP_017603238.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
ref|XP_016723150.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
ref|XP_012485938.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
gb|PPS11919.1| hypothetical protein GOBAR_AA08740 [Gossypium bar... 57 9e-07
gb|PPD67093.1| hypothetical protein GOBAR_DD36029 [Gossypium bar... 57 9e-07
ref|XP_017603237.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
ref|XP_016723149.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
ref|XP_012485937.1| PREDICTED: RNA polymerase sigma factor sigF,... 57 9e-07
gb|KHG01807.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 57 9e-07
>dbj|GAU44918.1| hypothetical protein TSUD_25810 [Trifolium subterraneum]
Length = 528
Score = 61.6 bits (148), Expect = 2e-08
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FG+SRERVRQLENRALYKIKK LV+QGL+AYA +LI
Sbjct: 493 FGMSRERVRQLENRALYKIKKCLVNQGLDAYAEMLI 528
>ref|XP_012570330.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Cicer arietinum]
Length = 543
Score = 60.8 bits (146), Expect = 4e-08
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLSRERVRQLE+RALYK+KK LV QGL+AYA+LLI
Sbjct: 508 FGLSRERVRQLESRALYKLKKSLVCQGLDAYADLLI 543
>ref|XP_003590454.2| RNA polymerase sigma factor [Medicago truncatula]
gb|AES60705.2| RNA polymerase sigma factor [Medicago truncatula]
Length = 561
Score = 60.8 bits (146), Expect = 4e-08
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLSRERVRQLE+RALYK+KK LV QGL+AYA+LLI
Sbjct: 526 FGLSRERVRQLESRALYKLKKYLVGQGLDAYADLLI 561
>ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Cicer arietinum]
Length = 576
Score = 60.8 bits (146), Expect = 4e-08
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLSRERVRQLE+RALYK+KK LV QGL+AYA+LLI
Sbjct: 541 FGLSRERVRQLESRALYKLKKSLVCQGLDAYADLLI 576
>gb|PNY07884.1| RNA polymerase sigma factor sigF chloroplastic-like [Trifolium
pratense]
Length = 503
Score = 58.2 bits (139), Expect = 4e-07
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLSRER+ QLENRALY++KK LVSQGL+AYA+ LI
Sbjct: 468 FGLSRERIHQLENRALYRLKKCLVSQGLDAYADKLI 503
>dbj|GAV75806.1| Sigma70_r3 domain-containing protein/Sigma70_r2 domain-containing
protein/Sigma70_r4 domain-containing protein [Cephalotus
follicularis]
Length = 564
Score = 57.8 bits (138), Expect = 5e-07
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLENRA+YK+K+ L +QGL+AYANL+I
Sbjct: 529 FGLSKERVRQLENRAIYKLKQCLDNQGLDAYANLII 564
>gb|PON60336.1| RNA polymerase sigma factor [Parasponia andersonii]
Length = 565
Score = 57.8 bits (138), Expect = 5e-07
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LVSQ L AYANLL+
Sbjct: 530 FGLSKERVRQLESRALYKLKQCLVSQDLGAYANLLV 565
>gb|KJB36542.1| hypothetical protein B456_006G165200 [Gossypium raimondii]
Length = 454
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 419 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 454
>ref|XP_017603241.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Gossypium arboreum]
Length = 482
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 447 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 482
>ref|XP_012485939.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Gossypium raimondii]
Length = 482
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 447 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 482
>gb|KJB36540.1| hypothetical protein B456_006G165200 [Gossypium raimondii]
Length = 507
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 472 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 507
>ref|XP_017603238.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Gossypium arboreum]
Length = 562
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 527 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 562
>ref|XP_016723150.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Gossypium hirsutum]
Length = 562
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 527 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 562
>ref|XP_012485938.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Gossypium raimondii]
Length = 562
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 527 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 562
>gb|PPS11919.1| hypothetical protein GOBAR_AA08740 [Gossypium barbadense]
Length = 564
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 529 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 564
>gb|PPD67093.1| hypothetical protein GOBAR_DD36029 [Gossypium barbadense]
Length = 564
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 529 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 564
>ref|XP_017603237.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium arboreum]
Length = 564
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 529 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 564
>ref|XP_016723149.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium hirsutum]
Length = 564
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 529 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 564
>ref|XP_012485937.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium raimondii]
gb|KJB36541.1| hypothetical protein B456_006G165200 [Gossypium raimondii]
Length = 564
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 529 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 564
>gb|KHG01807.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 564
Score = 57.0 bits (136), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = -1
Query: 400 FGLSRERVRQLENRALYKIKKRLVSQGLNAYANLLI 293
FGLS+ERVRQLE+RALYK+K+ LV QGL AYA+LL+
Sbjct: 529 FGLSKERVRQLESRALYKLKQCLVKQGLGAYADLLV 564