BLASTX nr result

ID: Astragalus23_contig00011652 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00011652
         (337 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004499166.1| PREDICTED: uncharacterized protein LOC101488...    71   7e-12
dbj|GAU15295.1| hypothetical protein TSUD_03630 [Trifolium subte...    62   1e-08
gb|PNY10944.1| pentatricopeptide repeat-containing protein [Trif...    58   3e-07

>ref|XP_004499166.1| PREDICTED: uncharacterized protein LOC101488639 [Cicer arietinum]
          Length = 715

 Score = 70.9 bits (172), Expect = 7e-12
 Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 11/87 (12%)
 Frame = +1

Query: 109 MRWRTLLSLRSSTHAFNKLNAISHSP---LLFKRLPVSSLTGYSYRHLHFHSPQTGSNSL 279
           M WRTLLSL SS    NKL +IS+SP   ++FKR PVSSLTG  YR+ H HSP+  SNSL
Sbjct: 1   MSWRTLLSLGSS---INKLKSISNSPFPSIIFKRHPVSSLTG--YRNFHSHSPEL-SNSL 54

Query: 280 INPGILT--------QQNDKENDTIED 336
           I+P + T        QQND E++T  +
Sbjct: 55  IDPSLRTTHLNDDKVQQNDNEDETTNE 81


>dbj|GAU15295.1| hypothetical protein TSUD_03630 [Trifolium subterraneum]
          Length = 712

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
 Frame = +1

Query: 109 MRWRTLLSLRSSTHAFNKLNAISH---SPLLFKRLPVSSLTGYSYRHLHFHSPQTGSNSL 279
           M +R LLSLRSS  A  KL +IS+   S +LF R P SS++G  +R+LH HSP+ G NSL
Sbjct: 1   MSFRILLSLRSSRTAITKLKSISNSQFSTILFNRFPDSSISG--HRNLHSHSPELG-NSL 57

Query: 280 INPGI-------LTQQNDKENDTIED 336
           I+P +         QQND E++T  +
Sbjct: 58  IDPSLKIHLNDNAVQQNDDEDETTNE 83


>gb|PNY10944.1| pentatricopeptide repeat-containing protein [Trifolium pratense]
          Length = 707

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
 Frame = +1

Query: 109 MRWRTLLSLRSSTHAFNKLNAISHSP---LLFKRLPVSSLTGYSYRHLHFHSPQTGSNSL 279
           M  R LLSLRSS  A  KL +I++S    +LF RLPVSS++G  +R+LH HS + G NSL
Sbjct: 1   MSCRILLSLRSSRIAITKLKSITNSQFSTILFNRLPVSSISG--HRNLHSHSSELG-NSL 57

Query: 280 INPGI-------LTQQNDKENDTIED 336
           I+P +          QND E++T  +
Sbjct: 58  IDPSLKIHLNDNAVHQNDYEDETTNE 83


Top