BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00010716
         (644 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX59999.1| hypothetical protein L195_g051704 [Trifolium prat...   280   3e-93
ref|XP_020211641.1| uncharacterized protein LOC109796376 [Cajanu...   275   2e-91
gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposo...   275   2e-90
gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposo...   273   7e-89
gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposo...   269   8e-88
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   275   6e-87
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   280   6e-84
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   280   8e-84
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   280   9e-84
gb|PNX66338.1| retrovirus-related Pol polyprotein from transposo...   258   1e-83
gb|PNX93473.1| retrovirus-related Pol polyprotein from transposo...   278   3e-83
gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposo...   265   7e-83
gb|PNX77046.1| retrovirus-related Pol polyprotein from transposo...   263   1e-82
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   275   2e-82
gb|KYP52266.1| Retrovirus-related Pol polyprotein from transposo...   254   2e-82
gb|KYP63849.1| Retrovirus-related Pol polyprotein from transposo...   253   2e-82
gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo...   255   4e-82
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo...   276   4e-82
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   275   1e-81
dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subte...   274   2e-81

>gb|PNX59999.1| hypothetical protein L195_g051704 [Trifolium pratense]
          Length = 203

 Score =  280 bits (716), Expect = 3e-93
 Identities = 131/178 (73%), Positives = 155/178 (87%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           MQTR KSGI  P+L+P++ LT TEPK  KQA+ DP WLAAM++E  ALQ N+TW+LV LP
Sbjct: 1   MQTRLKSGIVVPKLKPTLLLTHTEPKNVKQALLDPKWLAAMKSEFQALQQNQTWSLVHLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
           ++RKAIGCK VFR+KEN DGSINKYKARLVAKGFHQ+ GFDF+ETFSPVVKP+TIR+ILT
Sbjct: 61  ANRKAIGCKWVFRIKENPDGSINKYKARLVAKGFHQLQGFDFNETFSPVVKPLTIRLILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LA++Y WPL QLDVNNAFLNG L EEVYM+QP GF ++D S+VC+LHK+LYGLKQAPR
Sbjct: 121 LAISYKWPLQQLDVNNAFLNGVLEEEVYMQQPQGFENSDPSMVCKLHKALYGLKQAPR 178


>ref|XP_020211641.1| uncharacterized protein LOC109796376 [Cajanus cajan]
          Length = 193

 Score =  275 bits (704), Expect = 2e-91
 Identities = 133/178 (74%), Positives = 149/178 (83%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           MQTRSKSG   PR+ PS+FL  +EPKT KQA+ DPNW +AMQ E  AL  N TW LV LP
Sbjct: 1   MQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
           S RKA+GCK VFRVKENADGSI+K KARLVAKGFHQ+HGFDFHETFSPV+KP+TIRIILT
Sbjct: 61  SDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LALT +W L QLDVNNAFLNGTL E +YM QPPGF + D SLVC+L+K+LYGLKQAPR
Sbjct: 121 LALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPR 178


>gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 274

 Score =  275 bits (704), Expect = 2e-90
 Identities = 133/178 (74%), Positives = 149/178 (83%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           MQTRSKSG   PR+ PS+FL  +EPKT KQA+ DPNW +AMQ E  AL  N TW LV LP
Sbjct: 1   MQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
           S RKA+GCK VFRVKENADGSI+K KARLVAKGFHQ+HGFDFHETFSPV+KP+TIRIILT
Sbjct: 61  SDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LALT +W L QLDVNNAFLNGTL E +YM QPPGF + D SLVC+L+K+LYGLKQAPR
Sbjct: 121 LALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPR 178


>gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 324

 Score =  273 bits (699), Expect = 7e-89
 Identities = 132/177 (74%), Positives = 148/177 (83%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           MQTRSKSG   PR+ PS+FL  +EPKT KQA+ DPNW +AMQ E  AL  N TW LV LP
Sbjct: 1   MQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
           S RKA+GCK VFRVKENADGSI+K KARLVAKGFHQ+HGFDFHETFSPV+KP+TIRIILT
Sbjct: 61  SDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAP 641
           LALT +W L QLDVNNAFLNGTL E +YM QPPGF + D SLVC+L+K+LYGLKQAP
Sbjct: 121 LALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKALYGLKQAP 177


>gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 269

 Score =  269 bits (687), Expect = 8e-88
 Identities = 125/178 (70%), Positives = 149/178 (83%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           M TR+K GI  PRL+P++ LT  EPKT KQA+ +P W AAMQ E  AL +N TW+LVPLP
Sbjct: 1   MTTRAKDGIVKPRLQPTLLLTHVEPKTTKQALSNPTWSAAMQTEYNALLHNDTWSLVPLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
            HR AIGCK VFRVKEN +G++ KYKARLVAKGF+Q  GFD+HETFSPV+KPVT+R+ILT
Sbjct: 61  PHRTAIGCKWVFRVKENPNGTVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LALT+ WP+ QLDVNNAFLNGTL EEVYM QPPGF ++D +LVC+LHK++YGLKQAPR
Sbjct: 121 LALTHRWPIQQLDVNNAFLNGTLEEEVYMTQPPGFEASDKNLVCKLHKAIYGLKQAPR 178


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  275 bits (704), Expect = 6e-87
 Identities = 133/178 (74%), Positives = 149/178 (83%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           MQTRSKSG   PR+ PS+FL  +EPKT KQA+ DPNW +AMQ E  AL  N TW LV LP
Sbjct: 1   MQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
           S RKA+GCK VFRVKENADGSI+K KARLVAKGFHQ+HGFDFHETFSPV+KP+TIRIILT
Sbjct: 61  SDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LALT +W L QLDVNNAFLNGTL E +YM QPPGF + D SLVC+L+K+LYGLKQAPR
Sbjct: 121 LALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPR 178


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  280 bits (717), Expect = 6e-84
 Identities = 140/214 (65%), Positives = 160/214 (74%)
 Frame = +3

Query: 3    PSQATATAQNTQSPNPAQRXXXXXXXXXXXXXXXHSMQTRSKSGITFPRLRPSIFLTTTE 182
            PS   +++QN  SP  +                 H MQTRSKSG   PR+ PS+FL  +E
Sbjct: 710  PSSPESSSQNVSSPTSSTAPASIPRTINN-----HPMQTRSKSGFHNPRIHPSLFLAHSE 764

Query: 183  PKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLPSHRKAIGCKRVFRVKENADGSINK 362
            PKT KQA+ DPNW +AMQ E  AL  N TW LV LPS RKA+GCK VFRVKENADGSI+K
Sbjct: 765  PKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDK 824

Query: 363  YKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILTLALTYSWPLHQLDVNNAFLNGTLH 542
             KARLVAKGFHQ+HGFDFHETFSPV+KP+TIRIILTLALT +W L QLDVNNAFLNGTL 
Sbjct: 825  LKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLE 884

Query: 543  EEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            E +YM QPPGF + D SLVC+L+K+LYGLKQAPR
Sbjct: 885  ETIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPR 918


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score =  280 bits (716), Expect = 8e-84
 Identities = 132/180 (73%), Positives = 154/180 (85%)
 Frame = +3

Query: 105  HSMQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVP 284
            HSMQTRSKSGI  P++ PS+FL  +EPK  KQA+ DP+W +AM+ E +AL  N TW LVP
Sbjct: 789  HSMQTRSKSGIYKPKMPPSLFLAHSEPKNVKQALSDPDWFSAMKQEYSALLQNHTWDLVP 848

Query: 285  LPSHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRII 464
            LPS+R+A+GCK VFRVKENADGSINK+KARLVAKGFHQ+HGFDFHETFSPV+KP+TIRII
Sbjct: 849  LPSNRQAVGCKWVFRVKENADGSINKFKARLVAKGFHQVHGFDFHETFSPVIKPITIRII 908

Query: 465  LTLALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            +TLALTY+W L QLDVNNAFLNG L E VYM QPPGF   D SLVC+L+K+LYG+KQAPR
Sbjct: 909  ITLALTYNWHLFQLDVNNAFLNGILEETVYMVQPPGFEVEDKSLVCKLNKALYGVKQAPR 968


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  280 bits (717), Expect = 9e-84
 Identities = 140/214 (65%), Positives = 160/214 (74%)
 Frame = +3

Query: 3    PSQATATAQNTQSPNPAQRXXXXXXXXXXXXXXXHSMQTRSKSGITFPRLRPSIFLTTTE 182
            PS   +++QN  SP  +                 H MQTRSKSG   PR+ PS+FL  +E
Sbjct: 789  PSSPESSSQNVSSPTSSTAPASIPRTINN-----HPMQTRSKSGFHNPRIHPSLFLAHSE 843

Query: 183  PKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLPSHRKAIGCKRVFRVKENADGSINK 362
            PKT KQA+ DPNW +AMQ E  AL  N TW LV LPS RKA+GCK VFRVKENADGSI+K
Sbjct: 844  PKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDK 903

Query: 363  YKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILTLALTYSWPLHQLDVNNAFLNGTLH 542
             KARLVAKGFHQ+HGFDFHETFSPV+KP+TIRIILTLALT +W L QLDVNNAFLNGTL 
Sbjct: 904  LKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLE 963

Query: 543  EEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            E +YM QPPGF + D SLVC+L+K+LYGLKQAPR
Sbjct: 964  ETIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPR 997


>gb|PNX66338.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 258

 Score =  258 bits (659), Expect = 1e-83
 Identities = 124/178 (69%), Positives = 144/178 (80%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           M TR+K+G     L+P  FL + EP   K A+ DP+WL AMQAE  ALQ+N TW+LVPLP
Sbjct: 1   MVTRAKTG----NLKPKTFLASIEPTNIKNALADPHWLKAMQAEYKALQDNNTWSLVPLP 56

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
            H+KAIGCK +FRVKEN DGSINKYKARLVAKGFHQ  GFDF ETFSPV+KPVTIRIILT
Sbjct: 57  PHKKAIGCKWIFRVKENPDGSINKYKARLVAKGFHQTPGFDFTETFSPVIKPVTIRIILT 116

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LA+TY W + Q+D+NNAFLNG L EEVYM QP GF ++D +LVC+LHK+LYGLKQAPR
Sbjct: 117 LAVTYKWSVQQIDINNAFLNGLLQEEVYMTQPTGFENSDKTLVCKLHKALYGLKQAPR 174


>gb|PNX93473.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1181

 Score =  278 bits (710), Expect = 3e-83
 Identities = 130/180 (72%), Positives = 152/180 (84%)
 Frame = +3

Query: 105  HSMQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVP 284
            H+MQTR+KSGI  P+  P + LT++EPKT KQA+KDP W  AM+ E  ALQ N+TWTLV 
Sbjct: 646  HAMQTRAKSGIVRPKQNPKLLLTSSEPKTVKQALKDPQWYTAMKEEFDALQRNQTWTLVK 705

Query: 285  LPSHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRII 464
            LP +RKAIGCK VFR KEN DGSINK KARLVAKGFHQ+HGFDF+ETFSPV+KP+TIR+I
Sbjct: 706  LPPNRKAIGCKWVFRTKENPDGSINKLKARLVAKGFHQLHGFDFNETFSPVIKPITIRLI 765

Query: 465  LTLALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            L LA++Y WPL QLD+NNAFLNG+L EEVYM QP GF +TDSSLVC+L K+LYGLKQAPR
Sbjct: 766  LALAISYKWPLKQLDINNAFLNGSLDEEVYMVQPQGFETTDSSLVCKLQKALYGLKQAPR 825


>gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  265 bits (677), Expect = 7e-83
 Identities = 124/178 (69%), Positives = 147/178 (82%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           M TR+K GI  PRL+P++ LT  EPKT KQA+ +P W AAMQ E  AL +N TW+LVPLP
Sbjct: 1   MTTRAKDGIVKPRLQPTLLLTHVEPKTTKQALSNPTWTAAMQTEYNALLHNGTWSLVPLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
            HR AIGCK VFRVKEN +G++ KYKA LVAKGF+Q  GFD+HETFSPV+KPVT+R+ILT
Sbjct: 61  PHRTAIGCKWVFRVKENPNGTVQKYKACLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LALT+ WP+ QLDVNNAFLNGTL EEVYM QPPGF ++D  LVC+LHK++YGLKQAPR
Sbjct: 121 LALTHHWPIQQLDVNNAFLNGTLEEEVYMTQPPGFEASDKCLVCKLHKAIYGLKQAPR 178


>gb|PNX77046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 515

 Score =  263 bits (673), Expect = 1e-82
 Identities = 127/180 (70%), Positives = 144/180 (80%)
 Frame = +3

Query: 105 HSMQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVP 284
           HSM TR+K+G     L+P  F T  EP T K A+ DP WL AMQ E  AL +N TW+LVP
Sbjct: 72  HSMITRAKTG----HLKPKAFTTIFEPTTVKSALADPQWLQAMQTEFKALTDNNTWSLVP 127

Query: 285 LPSHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRII 464
           LP H+KAIGCK +FR+KEN DG+INKYKARLVAKGF Q  GFDF ETFSPV+KPVTIRII
Sbjct: 128 LPPHKKAIGCKWIFRIKENPDGTINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRII 187

Query: 465 LTLALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LTLA+TY WP+ Q+D+NNAFLNG LHEEVYM QP GF S+D SLVC+LHKSLYGLKQAPR
Sbjct: 188 LTLAVTYKWPVQQIDINNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPR 247


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  275 bits (702), Expect = 2e-82
 Identities = 127/180 (70%), Positives = 151/180 (83%)
 Frame = +3

Query: 105  HSMQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVP 284
            H M TR+K GI  PRL+P++ LT  EPKT KQA+ +P W AAMQ E  AL +N TW+LVP
Sbjct: 535  HPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVP 594

Query: 285  LPSHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRII 464
            LP HR AIGCK VFRVKEN +GS+ KYKARLVAKGF+Q  GFD+HETFSPV+KPVT+R+I
Sbjct: 595  LPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLI 654

Query: 465  LTLALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            LTLALT+ WP+ QLDVNNAFLNGTL EEVYM+QPPGF ++D +LVC+LHK++YGLKQAPR
Sbjct: 655  LTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDKNLVCKLHKAIYGLKQAPR 714


>gb|KYP52266.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 244

 Score =  254 bits (649), Expect = 2e-82
 Identities = 121/178 (67%), Positives = 145/178 (81%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           M TR+K+GI  PRL+P++ L   EPK  KQA+ +  WLAAM+ E  AL +N TWTLV LP
Sbjct: 1   MTTRAKAGIVKPRLQPTLLLIDVEPKNTKQALANDTWLAAMKQEYNALLDNGTWTLVSLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
           S+R  IGCK +FRVKEN DG+I+KYKARLVAKGFHQ +G+D++ETFSPVVKPVTIRIILT
Sbjct: 61  SNRTVIGCKWIFRVKENPDGTIHKYKARLVAKGFHQQYGYDYNETFSPVVKPVTIRIILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           LALT+ WP+ QLDVNNA +NG L EEVYM QP GF S+D +LVC+LHK +YGLKQAPR
Sbjct: 121 LALTHHWPIQQLDVNNALINGNLEEEVYMSQPLGFESSDKNLVCKLHKEIYGLKQAPR 178


>gb|KYP63849.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 218

 Score =  253 bits (646), Expect = 2e-82
 Identities = 122/179 (68%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           M TRSK+GI  PR  P++ L+   PKT K A+ DPNWLAAMQA++TAL  N TW+L  LP
Sbjct: 1   MLTRSKNGIVQPRQNPTLLLSHVVPKTVKTALADPNWLAAMQAKITALHTNNTWSLTTLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
             RK IGCK VFRVKEN DGSINKYKARLVAKGFHQ+ G DF ETFSPVV P+TIRI+L+
Sbjct: 61  PGRKPIGCKWVFRVKENPDGSINKYKARLVAKGFHQLPGLDFSETFSPVVNPITIRIVLS 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFV-STDSSLVCRLHKSLYGLKQAPR 644
           L +++ W L QLD+NNAFLNG L E++YM QPPGFV S +  LVC+LHKSLYGLKQAPR
Sbjct: 121 LTVSFRWSLRQLDINNAFLNGMLEEDIYMSQPPGFVDSANKHLVCKLHKSLYGLKQAPR 179


>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 293

 Score =  255 bits (652), Expect = 4e-82
 Identities = 118/178 (66%), Positives = 145/178 (81%)
 Frame = +3

Query: 111 MQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLP 290
           MQTRSKSGI  P+L P++ LTTTEP + KQA+  P+W  AM  E  AL  N+TWTLVPLP
Sbjct: 1   MQTRSKSGIVRPKLHPTLLLTTTEPTSLKQALSSPSWKTAMSLEYDALIKNQTWTLVPLP 60

Query: 291 SHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILT 470
           S+R  +GCK V+R+KEN DG+INKYKARLVAKGFHQ  G D+ ETFSPV+KP+TIR+ILT
Sbjct: 61  SNRTVVGCKWVYRIKENQDGTINKYKARLVAKGFHQKFGCDYSETFSPVIKPITIRVILT 120

Query: 471 LALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
           L +TY WP+ Q+D+NNAFLNG L E+VYM QPPGF  +D +LVC+L+K++YGLKQAPR
Sbjct: 121 LDVTYHWPIKQVDINNAFLNGFLEEDVYMMQPPGFEVSDKTLVCKLNKAIYGLKQAPR 178


>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1516

 Score =  276 bits (706), Expect = 4e-82
 Identities = 136/214 (63%), Positives = 159/214 (74%)
 Frame = +3

Query: 3    PSQATATAQNTQSPNPAQRXXXXXXXXXXXXXXXHSMQTRSKSGITFPRLRPSIFLTTTE 182
            P   ++T+  T S +P Q                H MQTR+KSGI  PR+ P + LT TE
Sbjct: 944  PHNPSSTSITTHSDSPTQSSPSPTIPSLPTNN--HRMQTRAKSGI-IPRINPKLLLTHTE 1000

Query: 183  PKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVPLPSHRKAIGCKRVFRVKENADGSINK 362
            P+T KQA++DP WL AM  E  AL+ N TWTLVPLP HR AIGCK VFR KEN DG+INK
Sbjct: 1001 PRTVKQALQDPKWLTAMTEEFEALKRNHTWTLVPLPKHRSAIGCKWVFRTKENPDGTINK 1060

Query: 363  YKARLVAKGFHQIHGFDFHETFSPVVKPVTIRIILTLALTYSWPLHQLDVNNAFLNGTLH 542
            YKARLVAKGFHQI GFDF+ETFSPV+KP+TIR+IL+LA++Y WPL QLDVNNAFLNG L 
Sbjct: 1061 YKARLVAKGFHQIQGFDFNETFSPVIKPITIRLILSLAVSYKWPLKQLDVNNAFLNGLLE 1120

Query: 543  EEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            EEVYM QPPGF   D +LVC+L+K+LYGLKQAPR
Sbjct: 1121 EEVYMIQPPGFEEADENLVCKLNKALYGLKQAPR 1154


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  275 bits (702), Expect = 1e-81
 Identities = 127/180 (70%), Positives = 151/180 (83%)
 Frame = +3

Query: 105  HSMQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVP 284
            H M TR+K GI  PRL+P++ LT  EPKT KQA+ +P W AAMQ E  AL +N TW+LVP
Sbjct: 870  HPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVP 929

Query: 285  LPSHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRII 464
            LP HR AIGCK VFRVKEN +GS+ KYKARLVAKGF+Q  GFD+HETFSPV+KPVT+R+I
Sbjct: 930  LPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLI 989

Query: 465  LTLALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            LTLALT+ WP+ QLDVNNAFLNGTL EEVYM+QPPGF ++D +LVC+LHK++YGLKQAPR
Sbjct: 990  LTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDKNLVCKLHKAIYGLKQAPR 1049


>dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subterraneum]
          Length = 1409

 Score =  274 bits (701), Expect = 2e-81
 Identities = 127/180 (70%), Positives = 152/180 (84%)
 Frame = +3

Query: 105  HSMQTRSKSGITFPRLRPSIFLTTTEPKTAKQAIKDPNWLAAMQAELTALQNNKTWTLVP 284
            H MQTR KSG+  P++ P + LT TEP+T KQA++D  WL+AM  E  AL+ NKTWTLVP
Sbjct: 899  HPMQTRVKSGLILPKINPKLLLTHTEPRTTKQALQDRKWLSAMTEEFEALKRNKTWTLVP 958

Query: 285  LPSHRKAIGCKRVFRVKENADGSINKYKARLVAKGFHQIHGFDFHETFSPVVKPVTIRII 464
            LP++R  IGCK VFR KEN DG+INKYKARLVAKGFHQ+ GFDF+ETFSPV+KP+TIR+I
Sbjct: 959  LPNNRDVIGCKWVFRTKENPDGTINKYKARLVAKGFHQVQGFDFNETFSPVIKPITIRLI 1018

Query: 465  LTLALTYSWPLHQLDVNNAFLNGTLHEEVYMEQPPGFVSTDSSLVCRLHKSLYGLKQAPR 644
            L+LA++Y WPL QLDVNNAFLNGTL EEVYM QPPGF  +D+SLVC+L+K+LYGLKQAPR
Sbjct: 1019 LSLAVSYKWPLKQLDVNNAFLNGTLEEEVYMVQPPGFEVSDTSLVCKLNKALYGLKQAPR 1078