BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00010703
         (760 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009429897.1| photosystem I assembly protein ycf4 (plastid...   365   e-126
ref|YP_009175771.1| photosystem I assembly protein ycf4 (chlorop...   358   e-123
ref|YP_009242965.1| photosystem I assembly protein Ycf4 (chlorop...   343   e-118
ref|YP_009440607.1| photosystem I assembly protein ycf4 (chlorop...   336   e-115
ref|YP_009334201.1| photosystem I assembly protein Ycf4 (chlorop...   296   4e-99
ref|YP_009437903.1| photosystem I assembly protein ycf4 (chlorop...   296   5e-99
ref|YP_009389865.1| photosystem I assembly protein Ycf4 (chlorop...   290   1e-96
gb|AGR83927.1| putative photosystem I assembly protein Ycf4 (chl...   266   6e-87
gb|AGR83912.1| putative photosystem I assembly protein Ycf4 (chl...   264   7e-86
ref|YP_009027214.1| photosystem I assembly protein ycf4 [Trifoli...   263   1e-85
gb|AFR59963.1| putative photosystem I assembly protein Ycf4 (pla...   263   2e-85
ref|YP_009027126.1| photosystem I assembly protein ycf4 [Trifoli...   260   1e-84
ref|YP_009033517.1| photosystem I assembly protein ycf4 (chlorop...   259   2e-84
gb|AHY20425.1| photosystem I assembly protein ycf4 (chloroplast)...   259   3e-84
ref|YP_009027050.1| photosystem I assembly protein ycf4 [Trifoli...   259   3e-84
ref|YP_009046863.1| photosystem I assembly protein ycf4 (chlorop...   257   2e-83
ref|XP_003605600.2| photosystem I assembly protein Ycf4 [Medicag...   263   4e-82
ref|YP_009327937.1| photosystem I assembly protein Ycf4 (chlorop...   250   5e-81
gb|AGS43984.1| photosystem I assembly protein ycf4 (plastid) [Vi...   250   7e-81
gb|ADE42521.1| photosystem I assembly protein Ycf4 (chloroplast)...   250   1e-80

>ref|YP_009429897.1| photosystem I assembly protein ycf4 (plastid) [Carmichaelia
           australis]
 gb|ASY01227.1| photosystem I assembly protein ycf4 (plastid) [Carmichaelia
           australis]
          Length = 221

 Score =  365 bits (938), Expect = e-126
 Identities = 178/199 (89%), Positives = 180/199 (90%)
 Frame = +3

Query: 162 MIDXXXXXXXXXXXXTAGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWAS 341
           MID             AGLLVY QQQISWGS HLMRRFAEDAWLY+VPGARKPINFFWAS
Sbjct: 1   MIDVFVPLVGLVLILMAGLLVYVQQQISWGSRHLMRRFAEDAWLYSVPGARKPINFFWAS 60

Query: 342 FTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLIL 521
           FTLLGSLGVLVISASSY+GRNFFS NS EFLVPFLPQGVTLTFYGISGLFVSFHWWLLIL
Sbjct: 61  FTLLGSLGVLVISASSYFGRNFFSLNSDEFLVPFLPQGVTLTFYGISGLFVSFHWWLLIL 120

Query: 522 WNVGSGYNLYDKKNGMVRFFRYEFPGENRRILSKVRVEDILALQFFDNPEPLSGVLYMHT 701
           WNVGSGYNLYDKKNGMV FFRY FPGENRRILSKVRVEDILALQFFDNPEPLSGVLYMHT
Sbjct: 121 WNVGSGYNLYDKKNGMVWFFRYGFPGENRRILSKVRVEDILALQFFDNPEPLSGVLYMHT 180

Query: 702 REQGDIPLTLVDDYYDRTP 758
           REQGDIPLTLVDDYYDRTP
Sbjct: 181 REQGDIPLTLVDDYYDRTP 199


>ref|YP_009175771.1| photosystem I assembly protein ycf4 (chloroplast) [Astragalus
           mongholicus var. nakaianus]
 gb|ALH42771.1| photosystem I assembly protein ycf4 (chloroplast) [Astragalus
           mongholicus var. nakaianus]
          Length = 195

 Score =  358 bits (920), Expect = e-123
 Identities = 170/173 (98%), Positives = 171/173 (98%)
 Frame = +3

Query: 240 ISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFN 419
           +SWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFN
Sbjct: 1   MSWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFN 60

Query: 420 SSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYEFPG 599
           SSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRY FPG
Sbjct: 61  SSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYGFPG 120

Query: 600 ENRRILSKVRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 758
           ENRRILSKVRVEDILALQFFDNPEP SGVLYMHTREQGDIPLTLVDDYYDRTP
Sbjct: 121 ENRRILSKVRVEDILALQFFDNPEPFSGVLYMHTREQGDIPLTLVDDYYDRTP 173


>ref|YP_009242965.1| photosystem I assembly protein Ycf4 (chloroplast) [Astragalus
           mongholicus]
 gb|AMQ99228.1| photosystem I assembly protein Ycf4 (chloroplast) [Astragalus
           mongholicus]
 gb|ANK78959.1| photosystem I assembly protein Ycf4 (chloroplast) [Astragalus
           membranaceus var. membranaceus]
          Length = 187

 Score =  343 bits (880), Expect = e-118
 Identities = 164/165 (99%), Positives = 164/165 (99%)
 Frame = +3

Query: 264 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 443
           MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF
Sbjct: 1   MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 60

Query: 444 LPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYEFPGENRRILSK 623
           LPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRY FPGENRRILSK
Sbjct: 61  LPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYGFPGENRRILSK 120

Query: 624 VRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 758
           VRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP
Sbjct: 121 VRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 165


>ref|YP_009440607.1| photosystem I assembly protein ycf4 (chloroplast) [Lessertia
           frutescens]
 gb|ATG87672.1| photosystem I assembly protein ycf4 (chloroplast) [Lessertia
           frutescens]
          Length = 187

 Score =  336 bits (862), Expect = e-115
 Identities = 161/165 (97%), Positives = 161/165 (97%)
 Frame = +3

Query: 264 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 443
           MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNS EFLVPF
Sbjct: 1   MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSDEFLVPF 60

Query: 444 LPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYEFPGENRRILSK 623
           LPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMV FFRY FPGENRRILSK
Sbjct: 61  LPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVWFFRYGFPGENRRILSK 120

Query: 624 VRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 758
           VRVEDILALQFFDNPEP SGVLYMHTREQGDIPLTLVDDYYDRTP
Sbjct: 121 VRVEDILALQFFDNPEPRSGVLYMHTREQGDIPLTLVDDYYDRTP 165


>ref|YP_009334201.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
           microphylla]
 ref|YP_009389941.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
           korshinskii]
 gb|APL97407.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
           microphylla]
 gb|APL97483.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
           korshinskii]
          Length = 198

 Score =  296 bits (759), Expect = 4e-99
 Identities = 142/172 (82%), Positives = 153/172 (88%), Gaps = 2/172 (1%)
 Frame = +3

Query: 249 GSGHLMRRFAED--AWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNS 422
           GSGHLMRR+ E    W+YT+PGARKPINFFWASFTLLGSLGVL ISASS+YGRNFFSFNS
Sbjct: 4   GSGHLMRRYQEQEHTWIYTIPGARKPINFFWASFTLLGSLGVLFISASSFYGRNFFSFNS 63

Query: 423 SEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYEFPGE 602
           SEF+VPFLPQG TLTFYGI+GLFVSFHWW+LI WNVGSGYNLYD + GMV FFRY FPGE
Sbjct: 64  SEFVVPFLPQGATLTFYGIAGLFVSFHWWILIFWNVGSGYNLYDNQIGMVWFFRYGFPGE 123

Query: 603 NRRILSKVRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 758
           NR ILS VRVEDILALQF+ NPEP +GVLYM+TREQG IPLT VD YYDRTP
Sbjct: 124 NRCILSHVRVEDILALQFYANPEPRTGVLYMYTREQGAIPLTPVDVYYDRTP 175


>ref|YP_009437903.1| photosystem I assembly protein ycf4 (chloroplast) [Tibetia
           liangshanensis]
 gb|ATG33779.1| photosystem I assembly protein ycf4 (chloroplast) [Tibetia
           liangshanensis]
          Length = 188

 Score =  296 bits (757), Expect = 5e-99
 Identities = 139/165 (84%), Positives = 150/165 (90%)
 Frame = +3

Query: 264 MRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPF 443
           MRRF EDAWLYT+PGARKPINFFWASFTLLGSLGVL I+ASSY+GRNFFSFNSS+F+VPF
Sbjct: 1   MRRFQEDAWLYTIPGARKPINFFWASFTLLGSLGVLFIAASSYFGRNFFSFNSSDFVVPF 60

Query: 444 LPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYEFPGENRRILSK 623
           LPQG TLTFYGI+GLFVSFHWW+LI WNVGSGYNLYD K GMV  FRY FPGENR ILS 
Sbjct: 61  LPQGATLTFYGIAGLFVSFHWWILIFWNVGSGYNLYDSKIGMVWLFRYGFPGENRCILSH 120

Query: 624 VRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 758
           VRVEDILALQF+ NPEP +GVLYM+TREQG IPLT +DDYYDRTP
Sbjct: 121 VRVEDILALQFYANPEPRTGVLYMYTREQGAIPLTPLDDYYDRTP 165


>ref|YP_009389865.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
           kozlowii]
 gb|APL97305.1| photosystem I assembly protein Ycf4 (chloroplast) [Caragana
           kozlowii]
          Length = 198

 Score =  290 bits (742), Expect = 1e-96
 Identities = 140/172 (81%), Positives = 151/172 (87%), Gaps = 2/172 (1%)
 Frame = +3

Query: 249 GSGHLMRRFAED--AWLYTVPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNS 422
           GSGHLMRR+ E    W+YT+PGARKPINFFWASFTLLGSLGVL ISASS+YGRNFFSFNS
Sbjct: 4   GSGHLMRRYQEQEHTWIYTIPGARKPINFFWASFTLLGSLGVLFISASSFYGRNFFSFNS 63

Query: 423 SEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYEFPGE 602
            EF+VPFLPQG TLTFYGI+GLFVSFHWW+LI  NVGSGYNLYD + GMV FFRY FPGE
Sbjct: 64  DEFVVPFLPQGATLTFYGIAGLFVSFHWWILIFCNVGSGYNLYDNQIGMVWFFRYGFPGE 123

Query: 603 NRRILSKVRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 758
           NR ILS VRVEDILALQF+ NPEP +GVLYM+TREQG IPLT VD YYDRTP
Sbjct: 124 NRCILSHVRVEDILALQFYANPEPRTGVLYMYTREQGAIPLTPVDVYYDRTP 175


>gb|AGR83927.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula f. tricycla]
          Length = 224

 Score =  266 bits (681), Expect = 6e-87
 Identities = 135/185 (72%), Positives = 148/185 (80%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV   + ISWGS     R ++DAWL  VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 17  SALLVNVPKLISWGSEKYGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 75

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFS  SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKK  M
Sbjct: 76  YYGRHFFSLISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKKRM 135

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLTLVDDY
Sbjct: 136 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTLVDDY 195

Query: 744 YDRTP 758
           YDRTP
Sbjct: 196 YDRTP 200


>gb|AGR83912.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula f. tricycla]
 gb|AGV52593.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula f. tricycla]
          Length = 224

 Score =  264 bits (674), Expect = 7e-86
 Identities = 134/185 (72%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV   + ISWGS     R ++DAWL  VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 17  SALLVNVPKLISWGSEKYGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 75

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFS  SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKK  M
Sbjct: 76  YYGRHFFSLISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKKRM 135

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLT VDDY
Sbjct: 136 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDDY 195

Query: 744 YDRTP 758
           YDRTP
Sbjct: 196 YDRTP 200


>ref|YP_009027214.1| photosystem I assembly protein ycf4 [Trifolium repens]
 gb|AGO63641.1| photosystem I assembly protein ycf4 (plastid) [Trifolium repens]
          Length = 209

 Score =  263 bits (671), Expect = 1e-85
 Identities = 134/185 (72%), Positives = 148/185 (80%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV+  + ISW S     R ++DAWL  VPG++K INFFWASFTLLGSLGVL IS SS
Sbjct: 2   SALLVHVPKFISWRSKKQGCR-SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVSS 60

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFSF SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKKN M
Sbjct: 61  YYGRHFFSFISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNRM 120

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLT VDDY
Sbjct: 121 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDDY 180

Query: 744 YDRTP 758
           YDRTP
Sbjct: 181 YDRTP 185


>gb|AFR59963.1| putative photosystem I assembly protein Ycf4 (plastid) [Medicago
           truncatula]
 gb|AFR60039.1| putative photosystem I assembly protein Ycf4 (plastid) [Medicago
           truncatula]
 gb|AFR60115.1| putative photosystem I assembly protein Ycf4 (plastid) [Medicago
           truncatula]
 gb|AGR83887.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula var. truncatula]
 gb|AGR83892.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula f. tricycla]
 gb|AGR83897.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula var. truncatula]
 gb|AGR83902.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula var. truncatula]
 gb|AGR83907.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula var. truncatula]
 gb|AGR83917.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula var. truncatula]
 gb|AGR83922.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula var. truncatula]
 gb|AGR83932.1| putative photosystem I assembly protein Ycf4 (chloroplast)
           [Medicago truncatula var. truncatula]
          Length = 224

 Score =  263 bits (671), Expect = 2e-85
 Identities = 134/185 (72%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV   + ISWGS     R ++DAWL  VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 17  SALLVNVPKFISWGSEKHGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 75

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFS  SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKK  M
Sbjct: 76  YYGRHFFSLISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKKRM 135

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLT VDDY
Sbjct: 136 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDDY 195

Query: 744 YDRTP 758
           YDRTP
Sbjct: 196 YDRTP 200


>ref|YP_009027126.1| photosystem I assembly protein ycf4 [Trifolium aureum]
 gb|AGO63780.1| photosystem I assembly protein ycf4 (plastid) [Trifolium aureum]
          Length = 209

 Score =  260 bits (665), Expect = 1e-84
 Identities = 134/185 (72%), Positives = 148/185 (80%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV+  + IS GS     R ++DAWL  VPG+RK INFFWASFTLLGSLGVL IS SS
Sbjct: 2   SALLVHVPKFISGGSEKHGCR-SQDAWLDIVPGSRKTINFFWASFTLLGSLGVLYISVSS 60

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFSF SS+F+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKKN M
Sbjct: 61  YYGRHFFSFISSDFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNRM 120

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLT VDDY
Sbjct: 121 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDDY 180

Query: 744 YDRTP 758
           YDRTP
Sbjct: 181 YDRTP 185


>ref|YP_009033517.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
           meduseum]
 gb|AHY20428.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
           meduseum]
 gb|AHY85596.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
           meduseum]
          Length = 209

 Score =  259 bits (663), Expect = 2e-84
 Identities = 133/186 (71%), Positives = 148/186 (79%), Gaps = 3/186 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISW-GSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISAS 386
           + LLV+  + ISW    H  R  ++DAWL  VPG++K INFFWASFTLLGSLGVL IS S
Sbjct: 2   SALLVHVPKFISWEAEKHGCR--SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVS 59

Query: 387 SYYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNG 566
           SYYGR+FFSF SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKKN 
Sbjct: 60  SYYGRHFFSFISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNR 119

Query: 567 MVRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDD 740
           MV FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLT VD+
Sbjct: 120 MVCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDN 179

Query: 741 YYDRTP 758
           YYDRTP
Sbjct: 180 YYDRTP 185


>gb|AHY20425.1| photosystem I assembly protein ycf4 (chloroplast) (chloroplast)
           [Trifolium pratense]
          Length = 209

 Score =  259 bits (662), Expect = 3e-84
 Identities = 131/185 (70%), Positives = 148/185 (80%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV+  + ISWGS     R ++DAWL  VPG++K INFFWASFTLLGSLGVL IS SS
Sbjct: 2   SALLVHVPKLISWGSEKHGCR-SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVSS 60

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFSF SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLL  W+VGSGYN +DKKN M
Sbjct: 61  YYGRHFFSFISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLFFWDVGSGYNFFDKKNRM 120

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLY+ TREQG IPLT VD+Y
Sbjct: 121 VCFFRYGFPGTYRRIFLRVRMEDIQSLVLQANPNPEPSSGVLYIQTREQGTIPLTPVDNY 180

Query: 744 YDRTP 758
           YDRTP
Sbjct: 181 YDRTP 185


>ref|YP_009027050.1| photosystem I assembly protein ycf4 [Trifolium grandiflorum]
 gb|AGO63704.1| photosystem I assembly protein ycf4 (plastid) [Trifolium
           grandiflorum]
          Length = 209

 Score =  259 bits (662), Expect = 3e-84
 Identities = 134/185 (72%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV+  + IS GS     R ++DAWL  VPG+RK INFFWA FTLLGSLGVL IS SS
Sbjct: 2   SALLVHVPKFISGGSEKHGCR-SQDAWLDIVPGSRKTINFFWAFFTLLGSLGVLYISVSS 60

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFSF SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKKN M
Sbjct: 61  YYGRHFFSFISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNRM 120

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLT VDDY
Sbjct: 121 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDDY 180

Query: 744 YDRTP 758
           YDRTP
Sbjct: 181 YDRTP 185


>ref|YP_009046863.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
           subterraneum]
 gb|AID67348.1| photosystem I assembly protein ycf4 (chloroplast) [Trifolium
           subterraneum]
          Length = 209

 Score =  257 bits (657), Expect = 2e-83
 Identities = 132/186 (70%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISW-GSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISAS 386
           + LLV+  + ISW    H  R  ++DAWL  VPG++K INFFWASFTLLGSLGVL IS S
Sbjct: 2   SALLVHVPKFISWEAEKHGCR--SQDAWLDIVPGSKKTINFFWASFTLLGSLGVLYISVS 59

Query: 387 SYYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNG 566
           SYYGR+FFSF SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKKN 
Sbjct: 60  SYYGRHFFSFISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNR 119

Query: 567 MVRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDD 740
           MV FFRY FPG  RRI  +VR+ DI  L LQ   NPEP SGVLYM TREQG IPLT VD+
Sbjct: 120 MVCFFRYGFPGTYRRIFLRVRMADIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDN 179

Query: 741 YYDRTP 758
           YYDRTP
Sbjct: 180 YYDRTP 185


>ref|XP_003605600.2| photosystem I assembly protein Ycf4 [Medicago truncatula]
 gb|AES87797.2| photosystem I assembly protein Ycf4 [Medicago truncatula]
          Length = 474

 Score =  263 bits (671), Expect = 4e-82
 Identities = 134/185 (72%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV   + ISWGS     R ++DAWL  VPG+RKPINFFWASFTLLGSLGVL +S SS
Sbjct: 267 SALLVNVPKFISWGSEKHGCR-SQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSS 325

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFS  SSEF+VPFLPQGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKK  M
Sbjct: 326 YYGRHFFSLISSEFVVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKKRM 385

Query: 570 VRFFRYEFPGENRRILSKVRVEDI--LALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDY 743
           V FFRY FPG  RRI  +VR+EDI  L LQ   NPEP SGVLYM TREQG IPLT VDDY
Sbjct: 386 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPNPEPSSGVLYMQTREQGTIPLTPVDDY 445

Query: 744 YDRTP 758
           YDRTP
Sbjct: 446 YDRTP 450


>ref|YP_009327937.1| photosystem I assembly protein Ycf4 (chloroplast) [Medicago
           falcata]
 gb|APC60481.1| photosystem I assembly protein Ycf4 (chloroplast) [Medicago
           falcata]
          Length = 180

 Score =  250 bits (638), Expect = 5e-81
 Identities = 123/155 (79%), Positives = 131/155 (84%), Gaps = 2/155 (1%)
 Frame = +3

Query: 300 VPGARKPINFFWASFTLLGSLGVLVISASSYYGRNFFSFNSSEFLVPFLPQGVTLTFYGI 479
           VPG+RKPINFFWASFTLLGSLGVL IS SSYYGR+FFS  SSEF+VPFLPQGVTLTFYGI
Sbjct: 2   VPGSRKPINFFWASFTLLGSLGVLYISVSSYYGRHFFSLISSEFVVPFLPQGVTLTFYGI 61

Query: 480 SGLFVSFHWWLLILWNVGSGYNLYDKKNGMVRFFRYEFPGENRRILSKVRVEDI--LALQ 653
           +GLF+S HWWLLI WNVGSGYN +DKKN MV FFRY FPG  RRI  +VR+EDI  L LQ
Sbjct: 62  AGLFLSLHWWLLIFWNVGSGYNFFDKKNRMVCFFRYGFPGTYRRIFLRVRMEDIQSLILQ 121

Query: 654 FFDNPEPLSGVLYMHTREQGDIPLTLVDDYYDRTP 758
              NPEP SGVLYM TREQG IPLT VDDYYDRTP
Sbjct: 122 ANPNPEPSSGVLYMQTREQGTIPLTPVDDYYDRTP 156


>gb|AGS43984.1| photosystem I assembly protein ycf4 (plastid) [Vicia faba]
          Length = 204

 Score =  250 bits (639), Expect = 7e-81
 Identities = 129/183 (70%), Positives = 144/183 (78%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV+  + ISWGS  L  R ++DAWL  VPG+RK IN FWASFTLLGSLGVL IS SS
Sbjct: 2   SALLVHVPKFISWGSEKLGCR-SQDAWLDIVPGSRKIINLFWASFTLLGSLGVLYISVSS 60

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFSF SSEF++PFL QGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKKN M
Sbjct: 61  YYGRDFFSFISSEFVIPFLTQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNRM 120

Query: 570 VRFFRYEFPGENRRILSKVRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYD 749
           V FFRY FPG  RRI  +VR+EDI +L    NPEP SGVLYM TREQG IPLT VD   D
Sbjct: 121 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPEPSSGVLYMQTREQGTIPLTPVD---D 177

Query: 750 RTP 758
           RTP
Sbjct: 178 RTP 180


>gb|ADE42521.1| photosystem I assembly protein Ycf4 (chloroplast) [Vicia faba]
          Length = 219

 Score =  250 bits (639), Expect = 1e-80
 Identities = 129/183 (70%), Positives = 144/183 (78%)
 Frame = +3

Query: 210 AGLLVYFQQQISWGSGHLMRRFAEDAWLYTVPGARKPINFFWASFTLLGSLGVLVISASS 389
           + LLV+  + ISWGS  L  R ++DAWL  VPG+RK IN FWASFTLLGSLGVL IS SS
Sbjct: 17  SALLVHVPKFISWGSEKLGCR-SQDAWLDIVPGSRKIINLFWASFTLLGSLGVLYISVSS 75

Query: 390 YYGRNFFSFNSSEFLVPFLPQGVTLTFYGISGLFVSFHWWLLILWNVGSGYNLYDKKNGM 569
           YYGR+FFSF SSEF++PFL QGVTLTFYGI+GLF+S HWWLLI WNVGSGYN +DKKN M
Sbjct: 76  YYGRDFFSFISSEFVIPFLTQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNRM 135

Query: 570 VRFFRYEFPGENRRILSKVRVEDILALQFFDNPEPLSGVLYMHTREQGDIPLTLVDDYYD 749
           V FFRY FPG  RRI  +VR+EDI +L    NPEP SGVLYM TREQG IPLT VD   D
Sbjct: 136 VCFFRYGFPGTYRRIFLRVRMEDIQSLILQANPEPSSGVLYMQTREQGTIPLTPVD---D 192

Query: 750 RTP 758
           RTP
Sbjct: 193 RTP 195