BLASTX nr result

ID: Astragalus23_contig00010478 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00010478
         (568 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601950.2| 50S ribosomal protein L23 [Medicago truncatu...    58   5e-07
gb|ACJ86149.1| unknown [Medicago truncatula]                           58   5e-07

>ref|XP_003601950.2| 50S ribosomal protein L23 [Medicago truncatula]
 gb|AES72201.2| 50S ribosomal protein L23 [Medicago truncatula]
          Length = 208

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 24/87 (27%)
 Frame = +1

Query: 1   EEAPTKTHWLEENKVAQPFR------------------SKYSSNRGQFDRSSNRGRRFD- 123
           EEAP K+HWL+ENK  + F+                      SN+G+FDRS +   RF+ 
Sbjct: 122 EEAPGKSHWLDENKNTRGFKPQNGYHRGGFNRSGSNLFESSGSNQGRFDRSGSSRGRFER 181

Query: 124 ----RAD-NTAKFPWTSMKSGSTSATR 189
               RAD + AKFPW++M++G ++ATR
Sbjct: 182 PGSNRADGSAAKFPWSNMRTGRSNATR 208


>gb|ACJ86149.1| unknown [Medicago truncatula]
          Length = 208

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 24/87 (27%)
 Frame = +1

Query: 1   EEAPTKTHWLEENKVAQPFR------------------SKYSSNRGQFDRSSNRGRRFD- 123
           EEAP K+HWL+ENK  + F+                      SN+G+FDRS +   RF+ 
Sbjct: 122 EEAPGKSHWLDENKNTRGFKPQNGYRRGGFNRSGSNLFESSGSNQGRFDRSGSSRGRFER 181

Query: 124 ----RAD-NTAKFPWTSMKSGSTSATR 189
               RAD + AKFPW++M++G ++ATR
Sbjct: 182 PGSNRADGSAAKFPWSNMRTGRSNATR 208


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