BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00009917
         (2924 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN28363.1| Putative ribonuclease H protein, partial [Glycine...   139   1e-81
gb|KHN20323.1| Putative ribonuclease H protein, partial [Glycine...   138   2e-80
gb|KYP63901.1| Putative ribonuclease H protein At1g65750 family ...   158   7e-80
gb|KYP50779.1| Transposon TX1 uncharacterized [Cajanus cajan]         158   9e-80
ref|XP_019418409.1| PREDICTED: uncharacterized protein LOC109329...   153   3e-78
dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subt...   135   9e-77
gb|KYP44988.1| Putative ribonuclease H protein At1g65750 family ...   146   9e-77
gb|KYP40876.1| Putative ribonuclease H protein At1g65750 family ...   154   1e-76
gb|PNX83328.1| ribonuclease H, partial [Trifolium pratense]           175   4e-74
dbj|GAU22479.1| hypothetical protein TSUD_295980 [Trifolium subt...   137   2e-72
gb|PNY15032.1| ribonuclease H, partial [Trifolium pratense]           167   3e-72
gb|KYP48155.1| Putative ribonuclease H protein At1g65750 family ...   137   3e-72
gb|KYP43067.1| Putative ribonuclease H protein At1g65750 family,...   159   6e-72
gb|KYP34591.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]   154   2e-71
dbj|GAU34179.1| hypothetical protein TSUD_162800 [Trifolium subt...   134   5e-71
dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subt...   156   2e-70
dbj|GAU25119.1| hypothetical protein TSUD_274080 [Trifolium subt...   143   2e-70
gb|PNX79113.1| ribonuclease H, partial [Trifolium pratense]           145   4e-70
gb|PNY00676.1| ribonuclease H [Trifolium pratense]                    146   5e-70
gb|KYP44529.1| Putative ribonuclease H protein At1g65750 family ...   145   5e-70

>gb|KHN28363.1| Putative ribonuclease H protein, partial [Glycine soja]
          Length = 417

 Score =  139 bits (350), Expect(3) = 1e-81
 Identities = 60/90 (66%), Positives = 79/90 (87%)
 Frame = -2

Query: 1453 LASWKGRLLSISGRVTLINSVLNNIPLYMFSFYKAPKVVIKKMVKIQRDFLWGIKEGDNG 1274
            L+ W+GR LSI G+VTLINSVL+++PLY+FSF+KAPKVVIK++ +IQRDFLWG  E +  
Sbjct: 1    LSCWRGRNLSIGGKVTLINSVLSSLPLYLFSFFKAPKVVIKELTQIQRDFLWGSHEEERK 60

Query: 1273 MCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            +CWV+W+ +CKPK EGGLG+KNLE+FNI+L
Sbjct: 61   ICWVSWEDICKPKKEGGLGVKNLEVFNISL 90



 Score =  118 bits (296), Expect(3) = 1e-81
 Identities = 67/179 (37%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFAS---CFIHDSLEGISRRNVGSIWWRDLIGLDV 1012
            L KWKWR + D +A W  LL +RYG+  +   C +  S          SIWWRDL+ L+ 
Sbjct: 91   LAKWKWRCIHDHNALWRDLLAFRYGNLIAKQTCSLDRSWG-----TKDSIWWRDLMLLEK 145

Query: 1011 NLEE-QRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNW 835
            +L + Q  F       +GDG SILFW ++WLG EPL   FP LFA   QQ ++V   G+W
Sbjct: 146  DLSQNQNFFQRAVSCDVGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLVSVGNAGSW 205

Query: 834  TEEAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFY 658
              + W W   W +  +   +     L++IL  +       D W W   NSK F V S Y
Sbjct: 206  RRDQWTWGLTWKRQLNPNEEESLHSLETILVDVHLVAESHDRWKWSLHNSKLFTVSSCY 264



 Score = 99.4 bits (246), Expect(3) = 1e-81
 Identities = 52/134 (38%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
 Frame = -1

Query: 602 LGELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFF 423
           L  +WK  VP KV +F  RLLL+ LP +  L+RRNV+ +     CSLC +  E+V HLFF
Sbjct: 284 LSIVWKVPVPSKVALFCWRLLLDRLPTKDNLIRRNVVINNSR--CSLCDSCDENVVHLFF 341

Query: 422 SCRFAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAK-RTKHMFWLTICWSIWL 246
            C F+  +W+++ +W+G    ++   V  F    RL     ++ +   MFWL   W IW 
Sbjct: 342 HCDFSNCIWKEVLSWIGIVDVIAVGGVQHFWEYDRLLKYNTSRNKVPFMFWLATLWIIWQ 401

Query: 245 ARNSAIFKNEEPNV 204
            RN++IFK EE ++
Sbjct: 402 VRNNSIFKEEEKDI 415


>gb|KHN20323.1| Putative ribonuclease H protein, partial [Glycine soja]
          Length = 417

 Score =  138 bits (348), Expect(3) = 2e-80
 Identities = 60/90 (66%), Positives = 78/90 (86%)
 Frame = -2

Query: 1453 LASWKGRLLSISGRVTLINSVLNNIPLYMFSFYKAPKVVIKKMVKIQRDFLWGIKEGDNG 1274
            L+ W+GR LSI G+VTLINSVL+++PLY FSF+KAPKVVIK++ +IQRDFLWG  E +  
Sbjct: 1    LSCWRGRNLSIGGKVTLINSVLSSLPLYFFSFFKAPKVVIKELTQIQRDFLWGSHEEERK 60

Query: 1273 MCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            +CWV+W+ +CKPK EGGLG+KNLE+FNI+L
Sbjct: 61   ICWVSWEDICKPKKEGGLGVKNLEVFNISL 90



 Score =  114 bits (286), Expect(3) = 2e-80
 Identities = 66/179 (36%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFAS---CFIHDSLEGISRRNVGSIWWRDLIGLDV 1012
            L KWKWR + D +A W  LL +RYG+  +   C +  S          SIWWRDL+ L+ 
Sbjct: 91   LAKWKWRCIHDHNALWRDLLAFRYGNLIAKQTCSLDRSWG-----TKDSIWWRDLMLLEK 145

Query: 1011 NLEE-QRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNW 835
            +L + Q  F       +GDG SILFW ++WLG EPL   FP LFA   QQ  +V    +W
Sbjct: 146  DLSQNQNFFQRAVSCDVGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLESVGNASSW 205

Query: 834  TEEAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFY 658
              + W W   W +  +   +     L++IL  +       D W W   NSK F V S Y
Sbjct: 206  RRDQWTWGLTWKRQLNPNEEESLHSLETILVDVHLVAESHDRWKWSLHNSKLFTVSSCY 264



 Score = 99.8 bits (247), Expect(3) = 2e-80
 Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
 Frame = -1

Query: 602 LGELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFF 423
           L  +WK  VP KV +F  RLLL+ LP +  L+RRNV+ +     CSLC +  E+V HLFF
Sbjct: 284 LSIVWKVPVPSKVALFCWRLLLDRLPTKDNLIRRNVVINNSR--CSLCDSCDENVVHLFF 341

Query: 422 SCRFAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAK-RTKHMFWLTICWSIWL 246
            C F++ +W+++ +W+G    ++   V  F    RL     ++ +   MFWL   W IW 
Sbjct: 342 HCDFSKCIWKEILSWIGIVDVIAVGGVQHFWEYDRLLKYNTSRNKVPFMFWLATLWIIWQ 401

Query: 245 ARNSAIFKNEEPNV 204
            RN++IFK EE ++
Sbjct: 402 VRNNSIFKEEEKDI 415


>gb|KYP63901.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 616

 Score =  158 bits (400), Expect(3) = 7e-80
 Identities = 76/124 (61%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PFK LG+P+GANPR+ ATW  IL G+RKRL+SWK R LSI GRVTLIN+VLN +P++  
Sbjct: 140  LPFKHLGLPLGANPRKLATWRPILDGLRKRLSSWKHRYLSIGGRVTLINAVLNAMPIHFL 199

Query: 1363 SFYKAPKVVIKKMVKIQRDFLW-GIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIA 1187
            SF+KAP  VIK++V IQRDFLW G+K+G   + WV W+ VCK K++GGLGIK++ LFN A
Sbjct: 200  SFFKAPNSVIKEIVAIQRDFLWRGVKDGSK-IPWVKWETVCKSKDKGGLGIKDVRLFNWA 258

Query: 1186 LFNQ 1175
            L  +
Sbjct: 259  LLGK 262



 Score =  101 bits (252), Expect(3) = 7e-80
 Identities = 56/167 (33%), Positives = 84/167 (50%)
 Frame = -1

Query: 593 LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
           LWK   P+K +VF  ++ +N+ P +  L  R V    +   CSLCS   E   HLF  C 
Sbjct: 451 LWKCKAPIKCLVFCWQVFMNAFPCKSLLQVRGV--EVENNLCSLCSLFIEDPIHLFLMCP 508

Query: 413 FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLARNS 234
            A  +W  + NWL     L + +  L+L    L   KK+K+   + W+++ WS+WL RN 
Sbjct: 509 MAFNIWLSVANWLEVEVVLPNSLTSLYLYWTNLGIYKKSKQCFKVVWVSVIWSLWLHRNG 568

Query: 233 AIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
            IF+    + + V+  IK  +W W    +  C SFS S W+ +P  C
Sbjct: 569 IIFQQGVMDCKEVLDNIKMRSWKWIKSSVPGC-SFSYSNWYFSPRLC 614



 Score = 90.9 bits (224), Expect(3) = 7e-80
 Identities = 57/181 (31%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW WR +      W+ +L+ RYG   S         + +R+  S WW+D++ +     
Sbjct: 260  LGKWVWRCMISPRTIWAKVLQGRYGCIES---FPKTPNVDKRD--SWWWKDIVWVI---- 310

Query: 1002 EQRRFSWC---AKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWT 832
             Q+   W     +R +GDG+S  FW+D+W+G   L  VFP L++        V   GNW 
Sbjct: 311  -QQGNYWLDEKIERCIGDGSSTRFWEDKWIGGLRLLDVFPRLYSFAFDPLSMVGHNGNWE 369

Query: 831  EEAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQK 652
               W W   W +      +     L  +LQ IQ    KQD W W  D    F VKS Y  
Sbjct: 370  GSTWLWQVKWRREPFVHEEGSVNTLIEMLQEIQIFSSKQDQWRWICDKDGVFSVKSAYSW 429

Query: 651  L 649
            L
Sbjct: 430  L 430


>gb|KYP50779.1| Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 1102

 Score =  158 bits (400), Expect(3) = 9e-80
 Identities = 76/124 (61%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PFK LG+P+GANPR+ ATW  IL G+RKRL+SWK R LSI GRVTLIN+VLN +P++  
Sbjct: 626  LPFKHLGLPLGANPRKLATWRPILDGLRKRLSSWKHRYLSIGGRVTLINAVLNAMPIHFL 685

Query: 1363 SFYKAPKVVIKKMVKIQRDFLW-GIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIA 1187
            SF+KAP  VIK++V IQRDFLW G+K+G   + WV W+ VCK K++GGLGIK++ LFN A
Sbjct: 686  SFFKAPNSVIKEIVAIQRDFLWRGVKDGSK-IPWVKWETVCKSKDKGGLGIKDVRLFNWA 744

Query: 1186 LFNQ 1175
            L  +
Sbjct: 745  LLGK 748



 Score =  101 bits (251), Expect(3) = 9e-80
 Identities = 56/167 (33%), Positives = 84/167 (50%)
 Frame = -1

Query: 593  LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
            LWK   P+K +VF  ++ +N+ P +  L  R V    +   CSLCS   E   HLF  C 
Sbjct: 937  LWKCKAPIKCLVFCWQVFMNAFPCKSLLQVRGV--EVENNLCSLCSLFIEDPIHLFLLCP 994

Query: 413  FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLARNS 234
             A  +W  + NWL     L + +  L+L    L   KK+K+   + W+++ WS+WL RN 
Sbjct: 995  MAFNIWLSVANWLEVEVVLPNSLTSLYLYWTNLGIYKKSKQCFKVVWVSVIWSLWLHRNG 1054

Query: 233  AIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
             IF+    + + V+  IK  +W W    +  C SFS S W+ +P  C
Sbjct: 1055 IIFQQGVMDCKEVLDNIKMRSWKWIKSSVPGC-SFSYSNWYFSPRLC 1100



 Score = 90.9 bits (224), Expect(3) = 9e-80
 Identities = 57/181 (31%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW WR +      W+ +L+ RYG   S         + +R+  S WW+D++ +     
Sbjct: 746  LGKWVWRCMISPRTIWAKVLQGRYGCIES---FPKTPNVDKRD--SWWWKDIVWV----- 795

Query: 1002 EQRRFSWC---AKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWT 832
             Q+   W     +R +GDG+S  FW+D+W+G   L  VFP L++        V   GNW 
Sbjct: 796  LQQGNYWLDEKIERCIGDGSSTRFWEDKWIGGLRLLDVFPRLYSFAFDPLSMVGHNGNWE 855

Query: 831  EEAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQK 652
               W W   W +      +     L  +LQ IQ    KQD W W  D    F VKS Y  
Sbjct: 856  GSTWLWQIKWRRETFVHEEGSVNTLIEMLQEIQIFSSKQDQWRWICDKDGVFSVKSAYSW 915

Query: 651  L 649
            L
Sbjct: 916  L 916


>ref|XP_019418409.1| PREDICTED: uncharacterized protein LOC109329191 [Lupinus
            angustifolius]
          Length = 953

 Score =  153 bits (386), Expect(3) = 3e-78
 Identities = 67/124 (54%), Positives = 95/124 (76%)
 Frame = -2

Query: 1546 AIPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYM 1367
            +IPFKFLGIP+GANP+R +TWS ++   +++L+ W+ +LLS  GRVTL+ SVL+++P+Y 
Sbjct: 464  SIPFKFLGIPVGANPKRLSTWSLVIDTFKRKLSRWQQKLLSFGGRVTLLKSVLSSLPIYY 523

Query: 1366 FSFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIA 1187
            FSF+KAP  +I ++ +IQR FLWG  E + G+ WV W  VC+ K EGGLG+KNL LFN+A
Sbjct: 524  FSFFKAPVSIIHELERIQRRFLWGRGEVNKGIHWVRWKEVCRSKEEGGLGVKNLGLFNLA 583

Query: 1186 LFNQ 1175
            L  +
Sbjct: 584  LLGK 587



 Score = 97.8 bits (242), Expect(3) = 3e-78
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+W  L+  ++ W  +LR  YG      +   L  +     GS WWRDL G   N +
Sbjct: 585  LGKWRWHMLSSSESLWVKVLRSIYG--VEAVVRGGLVDVECFKKGSSWWRDL-GCLCNRD 641

Query: 1002 EQRRFSWC---AKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWT 832
                  W     +R +G G S LFW+D W+G E L   F  LF   + +   ++  G W 
Sbjct: 642  NGFNKGWFNEGVRRRVGSGQSTLFWRDIWVGGECLKNCFERLFQVTLNKDACISSMGEWR 701

Query: 831  EEAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQK 652
               W WL  W +      + E   L + ++ ++  +G +D W+W HD +  + V++ Y+ 
Sbjct: 702  NGVWCWLLNWRRSLFLWEQDEVNDLLNKVEEVRLVQGNEDGWLWVHDKNGTYSVRNAYKV 761

Query: 651  L 649
            L
Sbjct: 762  L 762



 Score = 94.7 bits (234), Expect(3) = 3e-78
 Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
 Frame = -1

Query: 593  LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
            LW S VP K+  F  RL +  +P    L RR ++ S     C+ C    ES +HLFF+C 
Sbjct: 777  LWASKVPSKLKCFAWRLFVGGVPTWMNLARRGIIGSLPSTLCAFCGELEESSDHLFFTCS 836

Query: 413  FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLC-NGKKAKRTKHMFWLTICWSIWLARN 237
             + +VWQ++ +  G Y  L S     FL+   L    KK  +     W    WS+WL RN
Sbjct: 837  LSYSVWQKLYSLFGIYSILPSSTGSNFLSHWHLFGEAKKFHQQWMTIWFVTIWSLWLVRN 896

Query: 236  SAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
              IF+    NV+ V+  I   +W+    R     SFS   W  NP  C
Sbjct: 897  KIIFEESSFNVDEVMFIINLHSWNLLSARFE-GFSFSFLEWVWNPSSC 943


>dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subterraneum]
          Length = 1985

 Score =  135 bits (340), Expect(3) = 9e-77
 Identities = 55/120 (45%), Positives = 87/120 (72%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PF +LG+P+GANPRR +TW  ++ G+++RL SW  + +S+ GR+ +IN+VL++IP++  
Sbjct: 1506 LPFMYLGLPVGANPRRYSTWQPMVEGIKRRLRSWGNKYISLGGRIVMINAVLSSIPIFFL 1565

Query: 1363 SFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            S+ K P +V K++V +QR+FLWG       +CWV W  +CKPK EGGL I++L   N++L
Sbjct: 1566 SYMKMPLMVWKEIVTLQRNFLWGGLSKRRRICWVKWAEICKPKKEGGLSIRDLRTVNLSL 1625



 Score =  110 bits (275), Expect(3) = 9e-77
 Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
 Frame = -1

Query: 593  LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
            +WKS VP KV     +L L+ +P +  L +R +L  +  ASC LC   +E+  HLF  C 
Sbjct: 1818 IWKSAVPSKVSALAWQLFLDRIPTKVNLYKRGILRMDH-ASCVLCGEEAETARHLFLHCD 1876

Query: 413  FAQAVWQQMGNWLGFYFYLSSDIV---DLFLACGRLCNGKKAKRTKHMFWLTICWSIWLA 243
            +A  +W  +  WLG +  L +D++    L + CGR    KK ++   + W+   W IW  
Sbjct: 1877 YAAGIWYAVCRWLGVFAVLPADVMMSYGLLVGCGR---NKKIRKGFAIVWMAFIWVIWKV 1933

Query: 242  RNSAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
            RN  +FKN    V   +  ++ L+W W + ++   SS  +  W  NP +C
Sbjct: 1934 RNERVFKNATVEVTDAVDMVQRLSWQWYLNKM-ASSSCLLYEWIWNPCEC 1982



 Score = 94.7 bits (234), Expect(3) = 9e-77
 Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEG-ISRRNVGS---IWWRDLIGLD 1015
            L KW+W+ L++ +  W  ++  +YG      IH      +  R++GS   +WWRDL  LD
Sbjct: 1626 LAKWRWKLLSEEEEVWKNVIIAKYG------IHMLGNARLDERDIGSMSSLWWRDLCRLD 1679

Query: 1014 VNLEEQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNW 835
              +     F   A++ LG G SI FWK+ W+G + L   FP LF   VQQ   V E G+W
Sbjct: 1680 KGVGWFNHF---ARKYLGCGNSIKFWKEVWVGGQSLELQFPRLFGISVQQDDMVREVGSW 1736

Query: 834  TEEAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQ 655
                W+W   W +      +     L+ +L  I  T  ++D WVW  +    F VKS Y+
Sbjct: 1737 VNGVWRWGLRWRRVLFVWEEDLVSELELVLNNISITE-EEDRWVWRLNVGDGFTVKSLYE 1795

Query: 654  KL 649
             L
Sbjct: 1796 AL 1797


>gb|KYP44988.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 481

 Score =  146 bits (368), Expect(3) = 9e-77
 Identities = 64/120 (53%), Positives = 90/120 (75%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            IPF +LG+PIG   R+ +TW  +L  +R +LA+WK + +S++GR++LINSVL++IPLY  
Sbjct: 3    IPFTYLGLPIGETARKASTWHPVLVKLRNKLATWKNKSISLAGRISLINSVLSSIPLYFM 62

Query: 1363 SFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            SFY+ P +V+K++V IQR+FLWG  E    +CWV WD+V  PK+ GGLGIK+L  FN AL
Sbjct: 63   SFYRLPTIVLKEIVSIQRNFLWGRDENVKKICWVRWDKVTMPKSMGGLGIKDLRSFNTAL 122



 Score =  102 bits (253), Expect(3) = 9e-77
 Identities = 53/175 (30%), Positives = 83/175 (47%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+W      D+ W  +L  +YG ++S  + D  +G   R   S WW DL       +
Sbjct: 123  LAKWRWNLFNHADSLWGKVLTSKYGGYSS--LADVGDGRQARFY-SEWWTDLKKTCGGQD 179

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
            +Q+ F    +  +GDG  I FW+D WLG E L   FP ++    Q+   +A+ GNW E  
Sbjct: 180  QQQWFDKLVRWKIGDGRKIRFWQDTWLGGESLINAFPRIYINSNQKHNKLADMGNWVENE 239

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFY 658
            W+W   W +   +  + +      +L  +   +  QD WVW  +++  F V S Y
Sbjct: 240  WKWQFYWRRTWLQRDQIQWSTFQHLLSQVNLVKQDQDKWVWLANSTGDFSVHSAY 294



 Score = 92.4 bits (228), Expect(3) = 9e-77
 Identities = 48/169 (28%), Positives = 74/169 (43%)
 Frame = -1

Query: 599 GELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFS 420
           G LW+  +P    V   RL+ N+LP    L  R V+ S+ +  C+ C+   E+ +HLFF 
Sbjct: 311 GGLWQLGIPWTAAVLMWRLVQNALPTVENLQSRGVILSDSQGRCAFCNEVQETSSHLFFC 370

Query: 419 CRFAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLAR 240
           CR    VW    +W+     L    ++       LC  +  +    +    + W IW  R
Sbjct: 371 CRITNKVWHHCWSWISISTVLPQSTLENVCQYPYLCLTQHERSKWDIIRSAVIWCIWRCR 430

Query: 239 NSAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
           N+ IFK E  +VE +   I  + WSW     N    +    W ++P  C
Sbjct: 431 NNKIFKGENVDVERLKNNIDHMVWSWLKIN-NVLFCYCFDQWMASPAAC 478


>gb|KYP40876.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 751

 Score =  154 bits (388), Expect(3) = 1e-76
 Identities = 73/123 (59%), Positives = 93/123 (75%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PFK LG+P+GANPR+ ATW  IL G+R RL+SWK R LSI GRVTLIN+VLN +P++  
Sbjct: 275  LPFKHLGLPLGANPRKLATWRPILDGLRNRLSSWKHRYLSIGGRVTLINAVLNAMPIHFL 334

Query: 1363 SFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            SF+KAP  VIK++V IQR FLW   E  + + WV W+ VCK K+EGGLGIK++ LFN AL
Sbjct: 335  SFFKAPNSVIKEIVAIQRGFLWRGVEDGSKIPWVKWETVCKSKDEGGLGIKDVRLFNWAL 394

Query: 1183 FNQ 1175
              +
Sbjct: 395  LGK 397



 Score = 95.5 bits (236), Expect(3) = 1e-76
 Identities = 54/167 (32%), Positives = 81/167 (48%)
 Frame = -1

Query: 593  LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
            LWK   P+K +VF  ++ +N+ P +  L  R V    +   CSLCS   E   HLF  C 
Sbjct: 586  LWKCKAPIKCLVFCWQVFMNAFPCKSLLQVRGV--ELENNLCSLCSFFIEDPLHLFLMCP 643

Query: 413  FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLARNS 234
             A   W  +  WL     L + +  L+L    L   KK+ +   + W+++ WS+WL RN 
Sbjct: 644  MAFNTWLSVAKWLEVEVVLPNSLTSLYLYWTNLGIYKKSTQCFKVVWVSVIWSLWLHRNG 703

Query: 233  AIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
             IF+    + + V+  IK  +W W    +  C SFS S W+ +P  C
Sbjct: 704  IIFQQGVMDCKEVLDNIKLRSWKWIKSSVPGC-SFSYSSWYFSPRLC 749



 Score = 90.5 bits (223), Expect(3) = 1e-76
 Identities = 58/180 (32%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW WR +      W+ +L+ RYG   S         + RR+  S WW+D++ +     
Sbjct: 395  LGKWVWRCMLYPSTMWAKVLQGRYGRIES---FSKTSNVDRRD--SWWWKDIVWV----L 445

Query: 1002 EQRRFSWCAK--RGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTE 829
            +Q  F    K  R +GDG S  FW+D+W+G   L  VFP L++        V   GNW  
Sbjct: 446  QQGNFWLDEKIDRCIGDGTSTRFWEDKWIGGLRLLDVFPRLYSFAFDPLSMVGHNGNWEG 505

Query: 828  EAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQKL 649
              W W   W +            L  +LQ +Q    KQD W W  D    F VKS Y  L
Sbjct: 506  STWLWQVKWRREPFVHEVGSVNSLLEMLQGLQIFSSKQDQWRWICDKDGVFSVKSAYSWL 565


>gb|PNX83328.1| ribonuclease H, partial [Trifolium pratense]
          Length = 573

 Score =  175 bits (443), Expect(3) = 4e-74
 Identities = 77/122 (63%), Positives = 101/122 (82%)
 Frame = -2

Query: 1549 EAIPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLY 1370
            ++IPFKFLGIP+GANPRR+ +W  I+  + KRL+SW GR LSI GRVTLINSVL+++PLY
Sbjct: 197  DSIPFKFLGIPVGANPRRQESWQPIVESLTKRLSSWSGRNLSIGGRVTLINSVLSSLPLY 256

Query: 1369 MFSFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNI 1190
             FSFYKAP+ +I K+V+IQR+FLWG    D  +CW+ W++VC PK++GGLG+K+LELFN 
Sbjct: 257  FFSFYKAPRCIINKLVRIQRNFLWGGGLEDKKLCWIKWEQVCLPKDKGGLGVKDLELFNT 316

Query: 1189 AL 1184
            AL
Sbjct: 317  AL 318



 Score =  109 bits (272), Expect(3) = 4e-74
 Identities = 61/175 (34%), Positives = 89/175 (50%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KWKWR L + DA W  LL YRYG  +S F+  S E ++  N  S+WWRD++G+    +
Sbjct: 319  LCKWKWRYLNEKDALWYELLCYRYGSPSSNFL--SREAVTTSNKDSLWWRDVVGVG-GKD 375

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
                F       LG+GASI FWK++W G  PL  +FP LF   + +  TV++  +     
Sbjct: 376  NDCWFPLQVSSILGNGASICFWKEKWFGAAPLRDLFPHLFDKEMFKDRTVSDLIHVGSSV 435

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFY 658
              W + W     +    E   L+ +L  +     ++D W W  ++S  F VKS Y
Sbjct: 436  VHWNSDWVDTLSQEEAVERADLEQLLTGLDLHADREDRWRWMLNDSGLFSVKSVY 490



 Score = 47.4 bits (111), Expect(3) = 4e-74
 Identities = 26/50 (52%), Positives = 31/50 (62%)
 Frame = -1

Query: 608 HFLGELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLC 459
           H L +LWK+ VP KV VFG RLLL  LP R AL  + VL S++  S   C
Sbjct: 508 HALHKLWKNDVPSKVGVFGWRLLLERLPTRAALASKVVLKSKKFGSMFFC 557


>dbj|GAU22479.1| hypothetical protein TSUD_295980 [Trifolium subterraneum]
          Length = 574

 Score =  137 bits (346), Expect(3) = 2e-72
 Identities = 61/121 (50%), Positives = 87/121 (71%)
 Frame = -2

Query: 1546 AIPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYM 1367
            +IPFK+LG+PIGANP+R ATW  +L  +R RL SW+ + +S+ GR+ +IN+VLN IP++ 
Sbjct: 90   SIPFKYLGLPIGANPKRLATWEPLLEHLRGRLGSWRNKHISLGGRIVMINAVLNAIPIFY 149

Query: 1366 FSFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIA 1187
             SF K P  V K +V+IQR+FLWG   G N + WV W  VCK K  GGLG++++ + N++
Sbjct: 150  LSFMKMPVTVRKLVVRIQREFLWGGVRGGNKINWVKWSVVCKKKCNGGLGVRDVRIVNLS 209

Query: 1186 L 1184
            L
Sbjct: 210  L 210



 Score =  103 bits (258), Expect(3) = 2e-72
 Identities = 56/170 (32%), Positives = 81/170 (47%)
 Frame = -1

Query: 602 LGELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFF 423
           L  +W S  P KV+ F  +LLL+ +P RG L+ R +  S+    C  C+   E+  HLF 
Sbjct: 403 LEHIWHSPAPSKVIAFSWQLLLDRIPTRGNLVLRGIPLSDVPWECVGCAGKMETSIHLFL 462

Query: 422 SCRFAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLA 243
            C  A  VW ++  WLG    +   +  LF     L N KK ++   M W    WSIW  
Sbjct: 463 FCPAAMLVWSEIFKWLGVLVIIPPSLSSLFEVMWGLSNNKKIRKGYLMIWHATLWSIWKV 522

Query: 242 RNSAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
           RN+++F N   N + +   IK L+W W + R+   S      W  +P  C
Sbjct: 523 RNASLFVNGSFNPKGIAEDIKILSWKWSLARVK-MSPCMFYEWTWDPGDC 571



 Score = 84.7 bits (208), Expect(3) = 2e-72
 Identities = 57/179 (31%), Positives = 81/179 (45%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+WR L      W  +L  +YG+  S  +  S  G+    V S WW+D+  LD  +E
Sbjct: 211  LAKWRWRFLQPGRPLWKVVLMAKYGNHISQEVDWS--GVRIPIVASNWWKDICSLDKAVE 268

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
             +   +    R LG+G    FW  +W+G  PL  +FP LF+    ++  VA+F     EA
Sbjct: 269  SKNWLADSIGRKLGNGLDTKFWTTKWMGNAPLALLFPRLFSLSNHKEGMVADFSEVVGEA 328

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQKLI 646
              W   W +   R  +   V L  IL A      + D WVW  +    F V S Y  L+
Sbjct: 329  RVWSFSWRRVLFRWEEDLVVRLREIL-APTIFSFESDKWVWILEEEGIFSVNSAYNFLL 386


>gb|PNY15032.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1490

 Score =  167 bits (423), Expect(3) = 3e-72
 Identities = 78/123 (63%), Positives = 93/123 (75%)
 Frame = -2

Query: 1552 TEAIPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPL 1373
            T A PFKFLGIP+GANPRR  TW+ +L  M KRL SW  R LS  GR+TLINSVL +IPL
Sbjct: 1058 TAATPFKFLGIPVGANPRRRETWNPVLEAMTKRLNSWNSRNLSFGGRLTLINSVLASIPL 1117

Query: 1372 YMFSFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFN 1193
            Y FSF+KAP  V+K + +IQR+FLWG    +  +CWV WD+VC PK EGGL +KNLELFN
Sbjct: 1118 YFFSFFKAPICVLKSIERIQRNFLWGGSLEEKKLCWVKWDQVCLPKEEGGLRVKNLELFN 1177

Query: 1192 IAL 1184
            +AL
Sbjct: 1178 LAL 1180



 Score = 94.0 bits (232), Expect(3) = 3e-72
 Identities = 60/181 (33%), Positives = 88/181 (48%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KWKWR L + DA W  LLR+RY  F S  + D  E +S  N  SIWWRD+I     + 
Sbjct: 1181 LCKWKWRLLHNDDAIWFDLLRHRYKSFPSFLLGDH-ETVSYAN-SSIWWRDVISSGRGVS 1238

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
            +    S  + R +G+G +  FW  +W G +   ++FP L+A  V++ ++VAE        
Sbjct: 1239 DNWFKSNISCR-VGNGHNTNFWNFRWYGNQAFCELFPDLYAKEVRKNVSVAELLGGAGSG 1297

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQKLIC 643
              W   W    D   + + + L  +L         QD W W  +++  F VKS Y  L+ 
Sbjct: 1298 LMWRWNWATPLDVNEEQQALNLQGLLADFSLHPTNQDQWRWLSESNGVFSVKSCYFSLLE 1357

Query: 642  T 640
            T
Sbjct: 1358 T 1358



 Score = 64.3 bits (155), Expect(3) = 3e-72
 Identities = 48/158 (30%), Positives = 61/158 (38%), Gaps = 2/158 (1%)
 Frame = -1

Query: 593  LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
            LWK+ VP K+ VFG RLLLN LP R AL  R            +    +E  +H      
Sbjct: 1375 LWKTDVPSKIKVFGWRLLLNKLPTRAALNHRG----------KILPLGAEGWHH------ 1418

Query: 413  FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLARNS 234
                                      F   G L N K     +++ WL   W+IW  RN 
Sbjct: 1419 --------------------------FTLFGDLFNVKDKGCVRYLVWLATSWNIWKFRNL 1452

Query: 233  AIFKNEEPNVEAVITRIKSLTWSWCV--YRLNCCSSFS 126
             IFK   P+V +V+  IK  +W W    Y    C  FS
Sbjct: 1453 VIFKGVLPDVSSVVDAIKLSSWVWFTNRYGRKSCYPFS 1490


>gb|KYP48155.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 563

 Score =  137 bits (344), Expect(3) = 3e-72
 Identities = 60/123 (48%), Positives = 91/123 (73%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PF +LG+PIGANPR+ ATW+ +    +K+LA WK + LS++GR  LINSVL+++PL+  
Sbjct: 91   MPFNYLGLPIGANPRKLATWNPV----KKKLARWKNKFLSLAGRACLINSVLSSLPLFYL 146

Query: 1363 SFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            SF++ PK V  ++V++Q +FLWG       + W++WDRVC+ KN+GGLGIK++ LFN +L
Sbjct: 147  SFFRIPKKVHLQLVRLQWNFLWGHMRDHKKVAWISWDRVCRSKNQGGLGIKDIILFNESL 206

Query: 1183 FNQ 1175
              +
Sbjct: 207  LGK 209



 Score = 95.1 bits (235), Expect(3) = 3e-72
 Identities = 54/177 (30%), Positives = 84/177 (47%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+W    D ++ W  LL  +YG + +      +EG  +R+  S WW+DL  +  +  
Sbjct: 207  LGKWRWNLFHDSNSLWVKLLESKYGGWRNL-----VEGEDKRS-HSYWWKDLRRVCGSNN 260

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
            EQ+ F       L DG  I FW+D+WLG   L   FP L+   +Q   T+   G W+   
Sbjct: 261  EQQWFDNMMTWKLMDGERIKFWEDKWLGNISLANKFPRLYVNSLQNHWTIKNMGTWSGTL 320

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQK 652
            W W   W +   R   ++   L+S+L+ +      QD WVW     + + V S Y++
Sbjct: 321  WIWDLKWRRRWLRRDDTQLQELESLLREVSLDNMHQDFWVWDPGQDEKYTVNSAYKE 377



 Score = 93.2 bits (230), Expect(3) = 3e-72
 Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = -1

Query: 602 LGELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFF 423
           L +LWK  +P K      RL    +P    L +RN+  S ++  C  C    E+ +HLFF
Sbjct: 391 LKQLWKLKIPPKAATLIWRLYQKGMPTVDNLTKRNIGVSFEDQLCRFCKGTQETSHHLFF 450

Query: 422 SCRFAQAVWQQMGNWLGFYFYLSSDIVDLF--LACGRLCNGKKAKRTKHMFWLTICWSIW 249
            C     +W+    W      L S+    F  L C  +  GK AK  K + W  + ++IW
Sbjct: 451 VCNTIDTLWKACYGWANLSTVLPSNTEQHFMQLPCS-ISFGKVAKGWK-ILWCAVVYNIW 508

Query: 248 LARNSAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
           L RN+ IF+ E  ++E +  +IK  TWSW   +++   +FS + W ++P  C
Sbjct: 509 LVRNNIIFRQERLDIEHLQQKIKYTTWSW--LKMDKAFTFSYAQWEADPGTC 558


>gb|KYP43067.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
            cajan]
          Length = 915

 Score =  159 bits (403), Expect(3) = 6e-72
 Identities = 70/120 (58%), Positives = 95/120 (79%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            IPF +LG+PIGANPRR  TW  +L  +RKRL+SWKG++LS++GRV LINSVLN++PL   
Sbjct: 439  IPFSYLGLPIGANPRRRNTWMPVLEKLRKRLSSWKGKVLSMAGRVALINSVLNSLPLLYL 498

Query: 1363 SFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            SF+KAPKVV  ++ K+QR FLWG K+G   + W+ WD++ + K +GGLGIK+++ FNIAL
Sbjct: 499  SFFKAPKVVRVEITKLQRQFLWGSKQGQRKIAWIRWDKITQSKQQGGLGIKDIKAFNIAL 558



 Score = 89.0 bits (219), Expect(3) = 6e-72
 Identities = 48/178 (26%), Positives = 78/178 (43%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+W      +  W  +L  +YG F +    +++         S+WW+DL+     LE
Sbjct: 559  LAKWRWNLFHQPNYLWVRVLCSKYGGFQNLCAQNAIRK------DSVWWKDLLKACGGLE 612

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
                F    +  +  G S+ FW D W G  PL   FP LF    QQ   +++ G+  +  
Sbjct: 613  LDEWFGRQLEWKVNSGRSVRFWLDNWRGCAPLAVTFPSLFVLSEQQHDMISDMGSLRDGK 672

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQKL 649
            W W+  WN  ++    +  + L  ++    S     D W+W  + S  F VK+ Y+ L
Sbjct: 673  WSWILRWNTNRNERDTNLEIQLRQMIGEWSSPINMPDMWIWKSEISGLFSVKTAYRAL 730



 Score = 75.9 bits (185), Expect(3) = 6e-72
 Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 7/171 (4%)
 Frame = -1

Query: 593  LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
            LW    P K ++F  R++   +P    LL+RN+  S+Q++ C LC ++ ES +HLF SC 
Sbjct: 746  LWSIKAPPKALIFLWRVINGGIPTVDNLLKRNITLSDQQSLCVLCKSDRESASHLFCSCP 805

Query: 413  FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTK-------HMFWLTICWS 255
                VW+    W+     +   +       G+  N   A  T+          WL    +
Sbjct: 806  VVHKVWKICLGWINCPSPIPQQV-------GQFLNFVPAPLTRSSQIDAWRSLWLATIRT 858

Query: 254  IWLARNSAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNP 102
            +WL RN  IF+    N + V   I   +W W     N       S+W +NP
Sbjct: 859  VWLHRNKVIFQGAPFNQDQVTKDILCTSWQWLDSFTN-HFKVPFSLWITNP 908


>gb|KYP34591.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 817

 Score =  154 bits (389), Expect(3) = 2e-71
 Identities = 75/124 (60%), Positives = 96/124 (77%), Gaps = 1/124 (0%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PFK LG+P+GANPR+  TW  +L  +RKRL+SWK + LSI GRVTLINSVLN IP++  
Sbjct: 368  LPFKHLGLPLGANPRKLYTWKPMLDSLRKRLSSWKYKHLSIGGRVTLINSVLNAIPIHFL 427

Query: 1363 SFYKAPKVVIKKMVKIQRDFLW-GIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIA 1187
            SF+KAP +VIK++V IQRDFLW G+K+G   + WV W+ VCK K EGGLGIK++ LFN A
Sbjct: 428  SFFKAPNLVIKEIVAIQRDFLWRGVKDGSK-IPWVKWETVCKSKVEGGLGIKDVRLFNWA 486

Query: 1186 LFNQ 1175
            L  +
Sbjct: 487  LLGK 490



 Score = 95.1 bits (235), Expect(3) = 2e-71
 Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGL----D 1015
            L KW W+ +      W+ +L +RYG   S     +   + RR   S+WW+D++ +    +
Sbjct: 488  LGKWVWKCMQSPGMLWAKVLHHRYGRIES---FSNCSNVDRRT--SLWWKDIVWVLHQGN 542

Query: 1014 VNLEEQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNW 835
              L+E+       +R +GDG    FW+D+W+G   L +VFP LF+  +     VA+ G W
Sbjct: 543  CWLDEK------IERCIGDGTMTRFWEDKWIGGLRLLEVFPRLFSFALDPLSVVADNGTW 596

Query: 834  TEEAWQWLNPWNQYQ-DRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFY 658
                W W   W +       +S  ++LD +L+ +Q    +QD W W +D    F VKS Y
Sbjct: 597  EGSTWVWQVKWRREPFVHEGRSVNILLD-MLKGLQVISSRQDYWRWIYDKDGVFSVKSAY 655



 Score = 73.2 bits (178), Expect(3) = 2e-71
 Identities = 44/144 (30%), Positives = 67/144 (46%)
 Frame = -1

Query: 611  QHFLGELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNH 432
            Q  +  LWK   P+K +VF  ++LLN+ P +  L  R V    +   CS CS   E+  H
Sbjct: 673  QLVIKRLWKCKAPIKCLVFCWQVLLNAFPCKSLLQVRGV--ELENNLCSFCSLFVENPLH 730

Query: 431  LFFSCRFAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSI 252
            LF  C  A   W  +  WL       + I   +L    L   +K  +   + W+++ WS+
Sbjct: 731  LFLMCPMAFNTWLAVAKWLEVTVVFPNSIFSHYLYWTNLGIYEKHSQLLRVVWVSVIWSL 790

Query: 251  WLARNSAIFKNEEPNVEAVITRIK 180
            WL RN  IF+    + + V+  IK
Sbjct: 791  WLHRNVIIFQQGTIDAKEVLDNIK 814


>dbj|GAU34179.1| hypothetical protein TSUD_162800 [Trifolium subterraneum]
          Length = 757

 Score =  134 bits (338), Expect(3) = 5e-71
 Identities = 59/120 (49%), Positives = 87/120 (72%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PFK+LG+P+GANPRR +TW  ++  +RK+L SW  + +SI GR+ LINSVLN+IP++  
Sbjct: 273  VPFKYLGLPVGANPRRLSTWEPLVASLRKKLNSWGHKHVSIEGRLVLINSVLNSIPIFYL 332

Query: 1363 SFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            SF K P  V+KK+++IQR+FLWG   G   + W+    VC+ K  GGLGI++L+  N++L
Sbjct: 333  SFMKMPVQVLKKVIRIQREFLWGGVNGGRNLSWIKRRVVCQGKKNGGLGIRDLKAVNLSL 392



 Score =  105 bits (263), Expect(3) = 5e-71
 Identities = 55/161 (34%), Positives = 79/161 (49%)
 Frame = -1

Query: 593  LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
            +W S  PLKVVVF  RLL + +P +  L+ R VL  E   SC  C +  ES  HLF  C+
Sbjct: 589  IWDSPAPLKVVVFSWRLLHDRVPTKENLIVRGVLPRESSGSCVWCGDIRESSAHLFLHCK 648

Query: 413  FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLARNS 234
             A  VW ++  WLG    +  ++  LF         KK+K+   + W ++ W+IW ARN+
Sbjct: 649  VALVVWYEIFRWLGVVIVIPPNLFTLFDYFSDSARSKKSKKGFLLVWHSVIWTIWKARNN 708

Query: 233  AIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWW 111
             IF N   +   ++   K L+W W   RL+          W
Sbjct: 709  QIFNNVTSDPFELVESAKVLSWRWSADRLHISPCLFYEWLW 749



 Score = 80.9 bits (198), Expect(3) = 5e-71
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDAS-WSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNL 1006
            L KW+WR L   D   W  +L  +YG      +  SL     R   S+WW+D+  L   +
Sbjct: 393  LMKWRWRLLNSEDTGLWKEVLVAKYGGHILHNVVWSLGSPPYR--ASLWWKDINDLQACV 450

Query: 1005 EEQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEE 826
              +   +    R LG+G+   FW D W+G   L   FP LF+  +Q++ TV+E      E
Sbjct: 451  NSKNWVAEMVTRFLGNGSRTRFWSDNWIGDVLLCSKFPRLFSLSLQKEATVSEMMVVEGE 510

Query: 825  AWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQKLI 646
               W   W +      +     L S+L+ + S   ++D W W  D   CF VKS Y  L+
Sbjct: 511  TKSWNFLWRRSLFLWEEERVSQLLSLLENV-SLSLEEDKWHWALDPDGCFSVKSAYDSLL 569


>dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subterraneum]
          Length = 596

 Score =  156 bits (394), Expect(3) = 2e-70
 Identities = 70/126 (55%), Positives = 93/126 (73%)
 Frame = -2

Query: 1552 TEAIPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPL 1373
            ++ IPFKFLGIP+GANPRR+ TW  ++  M  R + W G  L+  GR+TLINSVL ++PL
Sbjct: 182  SDVIPFKFLGIPVGANPRRKETWRPVVEAMSTRFSRWSGSHLTYGGRITLINSVLASLPL 241

Query: 1372 YMFSFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFN 1193
            Y FSF+KA   V+ ++V IQR+FLWG    +  MCWV WD VC P++ GGLG+KNL+LFN
Sbjct: 242  YFFSFFKASICVLNQLVSIQRNFLWGGGLEEKKMCWVKWDHVCLPRDLGGLGVKNLKLFN 301

Query: 1192 IALFNQ 1175
            IAL ++
Sbjct: 302  IALLSK 307



 Score = 88.6 bits (218), Expect(3) = 2e-70
 Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 5/184 (2%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L+KWKWR + D +A W  +LR+RYG  +S FI + +  IS     SIWW+D+    VN+ 
Sbjct: 305  LSKWKWRCVNDSEAVWKEVLRHRYGHLSS-FILNGVP-ISSNFKTSIWWKDM----VNIG 358

Query: 1002 EQRRFSWCAKRG---LGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAE--FGN 838
            E   + W        +G+G +I FW ++WLG   L  +FP LF     +   VA+    N
Sbjct: 359  ETFGYDWFQSNTRIIVGNGNNIAFWTNRWLGNNVLSDLFPNLFDKEAFKDAKVADRVINN 418

Query: 837  WTEEAWQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFY 658
                 W+W   W      A + +   L  +L          D W W  D+   F +KS Y
Sbjct: 419  NDGTIWRW--EWRGRLTEAEELDLAELQVLLTGFSLNPTCCDRWKWIPDSVGDFTIKSCY 476

Query: 657  QKLI 646
              LI
Sbjct: 477  NVLI 480



 Score = 74.7 bits (182), Expect(3) = 2e-70
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -1

Query: 596 ELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSC 417
           +LWK+ +P KV +FG RLLL  LP R AL  RN+L+++ E  C  CS   E  NHLFF+ 
Sbjct: 498 KLWKNDLPSKVGIFGWRLLLEKLPTRAALAHRNILNTDDELLCVFCSRVREDSNHLFFNR 557

Query: 416 RFAQAVWQQMGNWLG 372
              + +W+++ +WLG
Sbjct: 558 VHMKYLWRRIHDWLG 572


>dbj|GAU25119.1| hypothetical protein TSUD_274080 [Trifolium subterraneum]
          Length = 937

 Score =  143 bits (361), Expect(3) = 2e-70
 Identities = 57/120 (47%), Positives = 89/120 (74%)
 Frame = -2

Query: 1543 IPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMF 1364
            +PF +LG+P+GANPRR +TW  +L  +RKRL +W  + +S+ GR+ LINS+LN+IP++  
Sbjct: 455  LPFSYLGLPVGANPRRSSTWEPVLDSLRKRLRAWGNKYVSLGGRIVLINSILNSIPIFFL 514

Query: 1363 SFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            SF K P  V+K + +IQR+FLWG  +G + + WV W  VCKP+++GGLG++++   N++L
Sbjct: 515  SFLKLPAAVLKSITRIQREFLWGGVKGGSKISWVKWKEVCKPRSQGGLGVRDVGKVNLSL 574



 Score = 97.1 bits (240), Expect(3) = 2e-70
 Identities = 50/151 (33%), Positives = 71/151 (47%)
 Frame = -1

Query: 602  LGELWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFF 423
            L  +W+S  P KV+ F  +LL N +P R  L RR +L +     C  C    E+  HLF 
Sbjct: 766  LNSIWRSPAPSKVIAFSWKLLRNRIPTRDCLSRRGILAAGGSRECVHCQGREETALHLFL 825

Query: 422  SCRFAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLA 243
             C FA  VW  +  WLG    +  ++  LF          K  +   + W T  W+IW +
Sbjct: 826  FCDFAFRVWSAIFQWLGVVIVMPPNLFILFDCFVGAAGCNKRAKGFLLIWHTTVWAIWRS 885

Query: 242  RNSAIFKNEEPNVEAVITRIKSLTWSWCVYR 150
            RN  +F N   +  +VI  IK L+W W + R
Sbjct: 886  RNEILFANGVLDPSSVIDEIKLLSWRWGLSR 916



 Score = 78.6 bits (192), Expect(3) = 2e-70
 Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLE-GISRRNVGSIWWRDLIGLDVNL 1006
            L KW+W+ L    A W  +L  RYG+ A    H+ L  G    +  S WWRDL  +D+  
Sbjct: 575  LIKWRWKLLQKDAAVWKDVLVARYGENAR---HNVLWIGCPIPSSASCWWRDLCRIDLTE 631

Query: 1005 EEQRRFSWCAK---RGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEF--G 841
            E     SW AK   R +G G +  FWKD W+G  PL + FP LF+  +Q++  V+E   G
Sbjct: 632  EG----SWFAKNISRRVGRGDTTRFWKDCWVGQVPLCESFPRLFSISLQKEALVSEIRVG 687

Query: 840  NWTEEAWQWLNPWNQYQDRARKSEGVILDSILQAIQ------STRGKQDSWVWPHDNSKC 679
                  W+W   W       R+S  V  + +L  +Q      +     D W W  ++   
Sbjct: 688  GEGVSWWEW--GW-------RRSLFVWEEELLLGLQDFISPMAFSTDDDVWYWGLEDGGV 738

Query: 678  FKVKSFY 658
            F VKS Y
Sbjct: 739  FTVKSAY 745


>gb|PNX79113.1| ribonuclease H, partial [Trifolium pratense]
          Length = 615

 Score =  145 bits (366), Expect(3) = 4e-70
 Identities = 62/121 (51%), Positives = 88/121 (72%)
 Frame = -2

Query: 1546 AIPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYM 1367
            ++PFK+LG+P+GANPRR  TW  +L  +R+RL  W  + +S+ GR+ L+N+VLN IP++ 
Sbjct: 165  SVPFKYLGLPVGANPRRARTWEPLLEALRQRLGVWGNKYVSLGGRIVLLNAVLNAIPIFY 224

Query: 1366 FSFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIA 1187
             SF K P +V KK+ +IQR+FLWG K G N + WV WD VCKPK  GGLG++++   NI+
Sbjct: 225  LSFIKIPVLVWKKVQRIQREFLWGSKGGRNRISWVKWDTVCKPKKLGGLGVRDIRAVNIS 284

Query: 1186 L 1184
            L
Sbjct: 285  L 285



 Score = 91.3 bits (225), Expect(3) = 4e-70
 Identities = 47/133 (35%), Positives = 67/133 (50%)
 Frame = -1

Query: 593 LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
           LWK + P KV+ F  +LLL  +P +  L+RR V+       C  C +  ESV HLF  C 
Sbjct: 480 LWKCLAPSKVIAFAWQLLLERVPTQQNLVRREVMLPVGGQFCVWCGSEPESVVHLFIYCD 539

Query: 413 FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTICWSIWLARNS 234
           FA+ +W ++  WLG  F L  ++  +      +   K  K+   M W  + W+IW  RN+
Sbjct: 540 FARQIWTEVFMWLGLDFSLPQNLFSILNTIQGVTPKKCMKQGLTMIWTAMVWAIWKTRNA 599

Query: 233 AIFKNEEPNVEAV 195
            IF N    VE V
Sbjct: 600 VIFDNGVAEVEKV 612



 Score = 81.6 bits (200), Expect(3) = 4e-70
 Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+WR L D +A W  +L+ +YG+  +  +  ++    +    S WW+D+  + VNL 
Sbjct: 286  LAKWRWRLLEDDNAMWKEVLKSKYGELVTGMV--TVGEDCKPWFSSTWWKDIWSIRVNLN 343

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
                     KR +G G    FW+D W+G  PL + FP LF+   Q+   V +     E A
Sbjct: 344  TNWFTQGVIKR-IGCGDQTKFWRDIWVGTVPLQERFPRLFSVSTQKDCNVEDLREMVEGA 402

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQST--RGKQDSWVWPHDNSKCFKVKSFYQKL 649
              W   W +   R    E  ++  +LQ I        +D W W ++    F V S Y  +
Sbjct: 403  VNWRFAWRR---RLFVWEENLVVELLQIINQVVLSDDRDKWGWNYNGGGEFTVTSCYWAV 459

Query: 648  I 646
            I
Sbjct: 460  I 460


>gb|PNY00676.1| ribonuclease H [Trifolium pratense]
          Length = 962

 Score =  146 bits (369), Expect(3) = 5e-70
 Identities = 62/119 (52%), Positives = 88/119 (73%)
 Frame = -2

Query: 1540 PFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYMFS 1361
            PFK+LG+PIGAN R+ +TW  +L  +R RL SW+ + +S+ GR+ LIN+VLN IP++  S
Sbjct: 485  PFKYLGLPIGANSRKMSTWEPMLDSVRGRLGSWRNKFVSLGGRIVLINAVLNAIPIFFLS 544

Query: 1360 FYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIAL 1184
            + K P +V +++VK+QR+FLWG     N  CWV WD +C+PKNE GLGI++L L NI+L
Sbjct: 545  YMKMPMMVWRELVKVQRNFLWGGLTAQNKTCWVKWDDICRPKNEAGLGIRDLRLVNISL 603



 Score = 97.1 bits (240), Expect(3) = 5e-70
 Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
 Frame = -1

Query: 626  MIRPPQHFLGE-LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNN 450
            ++ P + F+ + LWK   P KV  F  +LLLN +  +  L +R +L  +Q+  C LC   
Sbjct: 783  ILEPVEDFVFKRLWKCASPSKVCAFAWQLLLNRVQTKENLFKRKMLCVDQQM-CVLCGRK 841

Query: 449  SESVNHLFFSCRFAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWL 270
             E+  HLF  C      W  +  WLGF   +  ++   F         KK K    + W 
Sbjct: 842  IETAVHLFLHCDCVSKAWYDITRWLGFTLIIPPNLATSFAMWATCVTNKKEKAGMCLIWN 901

Query: 269  TICWSIWLARNSAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
               W +W  RN ++F N    V+ ++ +IK ++W W + R+           WS P++C
Sbjct: 902  AFVWVVWKRRNDSVFNNATVTVDEMVEQIKVVSWQWFIGRMAKGPCLLYEWKWS-PIEC 959



 Score = 74.3 bits (181), Expect(3) = 5e-70
 Identities = 50/178 (28%), Positives = 79/178 (44%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+W+ L+     W  ++  RYG  +      +L  +    + S WWRDL  L+    
Sbjct: 604  LAKWRWKLLSHETEVWKEVVIARYG--SDVIGKSTLGDVDVPRIASTWWRDLCHLE---N 658

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
            +   FS    + +G G S  FW + W+G + L + FP LF   +QQQ+ +   G+     
Sbjct: 659  DSNWFSSAVGKKVGRGDSTSFWNEVWVGGQSLRQRFPRLFGISLQQQVMIQNAGSVIGGR 718

Query: 822  WQWLNPWNQYQDRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQKL 649
            WQW   W + + +  + +      I+ A        D W+W  D      VKS Y +L
Sbjct: 719  WQWNLMWRRERFQWEEDQYREFTEII-APFFPMDNYDKWLWLGD-GXXXTVKSAYLQL 774


>gb|KYP44529.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 567

 Score =  145 bits (367), Expect(3) = 5e-70
 Identities = 64/121 (52%), Positives = 92/121 (76%)
 Frame = -2

Query: 1546 AIPFKFLGIPIGANPRREATWSSILGGMRKRLASWKGRLLSISGRVTLINSVLNNIPLYM 1367
            + PF +LGIPIGANPR++ TW  I+  ++K+L+SWK ++LS++GRV L+NSVL ++PL  
Sbjct: 91   SFPFTYLGIPIGANPRKKDTWRPIVIKIQKKLSSWKCKVLSMAGRVCLLNSVLTSLPLLF 150

Query: 1366 FSFYKAPKVVIKKMVKIQRDFLWGIKEGDNGMCWVAWDRVCKPKNEGGLGIKNLELFNIA 1187
             SF++ P  V K++V +QR+FLWG KE    +CW++WDRV  PK  GGLG+KN+  FN+A
Sbjct: 151  LSFFRIPPSVSKEIVSLQRNFLWGCKEDQRKICWISWDRVTLPKKMGGLGVKNIIRFNMA 210

Query: 1186 L 1184
            L
Sbjct: 211  L 211



 Score = 97.4 bits (241), Expect(3) = 5e-70
 Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
 Frame = -3

Query: 1182 LTKWKWRALTDCDASWSGLLRYRYGDFASCFIHDSLEGISRRNVGSIWWRDLIGLDVNLE 1003
            L KW+W      D+ W+ +L  RYG   +     S    SRR+  S+WWRDL+ +   LE
Sbjct: 212  LAKWRWSLFHQNDSLWARVLYSRYGGGTNLCAQSS----SRRD--SLWWRDLVVVCGGLE 265

Query: 1002 EQRRFSWCAKRGLGDGASILFWKDQWLGIEPLFKVFPLLFAGVVQQQLTVAEFGNWTEEA 823
            +   F    K  +G G+ + FW D+W+G   L  +FP LF    QQ   + + G WT   
Sbjct: 266  QDNWFDRKVKWSIGSGSRVRFWLDKWIGPICLASLFPRLFTISEQQNQFIQDMGYWTGHR 325

Query: 822  WQWLNPWNQYQ-DRARKSEGVILDSILQAIQSTRGKQDSWVWPHDNSKCFKVKSFYQKLI 646
            W W   W + + +     E  ++  +L+     R + DSW W  + S  + V+S Y  + 
Sbjct: 326  WAWQLHWRRERFEWEIPLEQQLMQRLLECNPRAR-QVDSWWWLGEPSGTYTVRSAYSAIT 384

Query: 645  C-TDASSNDSAPAA 607
               D  SN  AP++
Sbjct: 385  SEADVGSNIGAPSS 398



 Score = 74.7 bits (182), Expect(3) = 5e-70
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
 Frame = -1

Query: 593 LWKSIVPLKVVVFG*RLLLNSLPVRGALLRRNVLHSEQEASCSLCSNNSESVNHLFFSCR 414
           +W    P K  +F  R++   LP    L  R+++ SE +A C  C ++ E+  HLF +C 
Sbjct: 399 VWSIPAPPKAKIFAWRMMSRGLPTVDNLASRSIVLSENDALCVFCKSDIETDYHLFCTCP 458

Query: 413 FAQAVWQQMGNWLGFYFYLSSDIVDLFLACGRLCNGKKAKRTKHMFWLTI----CWSIWL 246
               VW+   +W+     L   I+D F        G   + T+ ++W T+     W +W 
Sbjct: 459 VVDKVWKVCLSWINCPAPLPRCILDHF----NFIPGPFHQSTQAVYWRTVWLVTTWIVWR 514

Query: 245 ARNSAIFKNEEPNVEAVITRIKSLTWSWCVYRLNCCSSFSISMWWSNPLQC 93
            RN   FK+     ++++  I+  +W W +        +S S W  NP  C
Sbjct: 515 TRNLCRFKDSSFCFDSMVKEIQVHSWRW-LSSFTKSFRYSFSQWCCNPGLC 564