BLASTX nr result
ID: Astragalus23_contig00009608
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00009608
(1537 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU49902.1| hypothetical protein TSUD_139580 [Trifolium subt... 171 1e-58
dbj|GAU39350.1| hypothetical protein TSUD_56760 [Trifolium subte... 142 3e-58
gb|PNX92808.1| ribonuclease H [Trifolium pratense] 179 1e-54
dbj|GAU42618.1| hypothetical protein TSUD_238110 [Trifolium subt... 181 9e-51
gb|PNX71213.1| ribonuclease H [Trifolium pratense] 171 2e-49
dbj|GAU51479.1| hypothetical protein TSUD_413680 [Trifolium subt... 171 9e-48
gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense] 172 9e-48
gb|PNX96408.1| hypothetical protein L195_g019614 [Trifolium prat... 172 9e-48
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense] 179 1e-47
gb|PNY07715.1| ribonuclease H [Trifolium pratense] 171 2e-47
gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense] 164 9e-47
dbj|GAU35043.1| hypothetical protein TSUD_30090 [Trifolium subte... 167 1e-46
ref|XP_015941761.1| uncharacterized protein LOC107467237 [Arachi... 147 2e-46
gb|PNY03092.1| ribonuclease H [Trifolium pratense] 164 2e-46
ref|XP_021838584.1| uncharacterized protein LOC110778326 [Spinac... 138 3e-46
gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense] 166 6e-46
gb|ABN07997.1| contains similarity to reverse trancriptase, rela... 160 5e-45
gb|PNY15111.1| ribonuclease H [Trifolium pratense] 179 1e-44
dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subte... 179 2e-44
gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense] 154 5e-44
>dbj|GAU49902.1| hypothetical protein TSUD_139580 [Trifolium subterraneum]
Length = 440
Score = 171 bits (433), Expect(4) = 1e-58
Identities = 91/216 (42%), Positives = 122/216 (56%), Gaps = 1/216 (0%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QILVGK*EWGKKNTLG*L 375
+KGWKEK S AGR LIK VAQAIPTY M + IL GNG
Sbjct: 145 LKGWKEKNLSFAGRSTLIKAVAQAIPTYLMS-SFLILKGNG------------------- 184
Query: 376 AKAVQIQI*GWNGL-FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRTSFLEAK 552
G+ FR L FNE+LLAKQGWR + P+SL+AQ LKA+Y+P+ FLEAK
Sbjct: 185 ------------GMGFRDLRAFNEALLAKQGWRLITQPSSLVAQVLKAKYYPKDQFLEAK 232
Query: 553 IGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKPMGNDLT 732
S++WRSI ASW+IKKG W +G+G++I DNW+ + +W+P+P+ +
Sbjct: 233 SKNQMSYSWRSILQASWVIKKGSYWTIGSGDNINTWTDNWIHQRGNTTMWTPQPLNPNYV 292
Query: 733 HVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
V LM W+ +I+ F+ EA QIL+ P++
Sbjct: 293 KVKNLMTNSTNEWNTHLINQIFIAHEAQQILKIPII 328
Score = 45.1 bits (105), Expect(4) = 1e-58
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +2
Query: 101 RLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKH 220
+ SKYLG+PT +GRSK Q F+FI++++W K LK K+K+
Sbjct: 115 QFSKYLGMPTVMGRSKSQVFNFIQEKIWNK--LKGWKEKN 152
Score = 41.6 bits (96), Expect(4) = 1e-58
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 1007 PPKQAVLLWKILCKAVPVRAKLRNRGVACPLLYPRCHKHID 1129
PPK + L+W+I+ A+PV+ + +G+ C L PRC I+
Sbjct: 386 PPKHSHLIWRIINNALPVKGNIFKKGIQCDPLCPRCSTTIE 426
Score = 41.2 bits (95), Expect(4) = 1e-58
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQ-EGKEPESSKIDTGIWKHLWSLC 1004
+P+ D Q D G DG Y+V+ Y + +W + + SS W LW+L
Sbjct: 325 IPIIDRTQEDTLTWDGTMDGNYSVKSGYKAIMDWGINTDANKANSSNNPKDFWPKLWNLN 384
Query: 1005 IPP 1013
+PP
Sbjct: 385 VPP 387
>dbj|GAU39350.1| hypothetical protein TSUD_56760 [Trifolium subterraneum]
Length = 913
Score = 142 bits (358), Expect(3) = 3e-58
Identities = 70/155 (45%), Positives = 89/155 (57%)
Frame = +1
Query: 418 FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRTSFLEAKIGYSPSFTWRSIQNA 597
FR L FNE+LLAKQGWR P SL+AQ LK +YFP T F++AK G S+ W+SIQ A
Sbjct: 400 FRDLHAFNEALLAKQGWRLTTEPQSLVAQVLKDKYFPNTQFMQAKQGKKASYAWQSIQKA 459
Query: 598 SWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKPMGNDLTHVNQLMKEDKQSWDN 777
SWI+KK W VGNG +I I D W+ W+PKP +L V L+ Q W
Sbjct: 460 SWILKKACFWLVGNGHNINIWNDRWIHPHGGSHTWTPKPDNTNLNQVKDLIDPQTQCWKE 519
Query: 778 TIISASFLLFEAHQILESPLLIQINLIATCEEGKK 882
+I+ +FL +EA+QI PL C +G K
Sbjct: 520 QLINKTFLPYEANQIRHIPLSPYSTEDTICWQGTK 554
Score = 69.7 bits (169), Expect(3) = 3e-58
Identities = 37/107 (34%), Positives = 54/107 (50%)
Frame = +2
Query: 110 KYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGRFLSKWLLKLFLHTSWG 289
KYLG PT +GRSKKQ F++I+ RVW+K LK K+++
Sbjct: 329 KYLGQPTVIGRSKKQTFNYIQDRVWKK--LKGWKERN----------------------- 363
Query: 290 VLCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGFLEAY 430
+ R WWGS ++KIHW+ W+ + K K GG+GF + +
Sbjct: 364 ------LSFAGRVWWGSNVDQKKIHWLKWKNISKQKKVGGLGFRDLH 404
Score = 65.1 bits (157), Expect(3) = 3e-58
Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 25/148 (16%)
Frame = +2
Query: 989 FMELMHPPKQAVLLWKILCKAVPVRAKLRNRGVACPLLYPRCHKHIDPNLVRLKLGG*VS 1168
F +L +PPKQ L+W+ L A+PV+A L RG+ C L PRC++ P V
Sbjct: 593 FWKLQNPPKQLHLIWRTLHNALPVKANLITRGIICDSLCPRCNQ--SPETVDHVF----- 645
Query: 1169 T**NCILCSMA*TKSYSG-------------------------EKDTNEQIAAIIYSLWL 1273
+ C A +S +KD + I +IIYS+WL
Sbjct: 646 -----LNCEWAQKVWFSSPLTLKTNNNHTHNFNDWYNYFLNHTDKDYIQTINSIIYSIWL 700
Query: 1274 ARNAKCFENKDIPAIVSVRKAFSNLVEF 1357
ARN K KD P ++V KA L E+
Sbjct: 701 ARNNKIHNQKDTPVHMTVEKAIQILHEY 728
>gb|PNX92808.1| ribonuclease H [Trifolium pratense]
Length = 930
Score = 179 bits (453), Expect(2) = 1e-54
Identities = 103/231 (44%), Positives = 135/231 (58%), Gaps = 16/231 (6%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGC-----TVCIL*GNG*QILVGK*EWGKKN 360
IKGWK + S AGR LIK VAQAIPTY M C +C + + ++ K WG N
Sbjct: 336 IKGWKAQHLSFAGRSTLIKAVAQAIPTYVMSCFLLPKELC----SHIESMICKFWWGSNN 391
Query: 361 TLG*LAKAVQIQI*GWNGL----------FRSLSDFNESLLAKQGWRFLHNPTSLIAQCL 510
+I W+ + FR L FNE+LLAKQGWR + P S++AQ L
Sbjct: 392 DKR------KIHWIKWSTICKHKKKGGLSFRELRAFNEALLAKQGWRCITQPNSMVAQVL 445
Query: 511 KARYFPRTSFLEAKIGY-SPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQN 687
KA+Y+P+T+ LEA IG + S+TWRSI ASWI+KKGGLW +GNG + I DNWLP Q
Sbjct: 446 KAKYYPKTTLLEADIGSKNVSYTWRSISKASWILKKGGLWNIGNGATTNIWTDNWLPRQQ 505
Query: 688 RFKVWSPKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
K+WSPK T V LM + +SW+ +I +F+ FEA QI + P++
Sbjct: 506 GHKIWSPKGEATQ-TWVKDLMIPEIRSWNRQLIFDTFMQFEAEQITQIPIV 555
Score = 65.1 bits (157), Expect(2) = 1e-54
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSK-IDTGIWKHLWSLC 1004
+P+ ++PD + KDG+YTV+ Y +Q+WK K S K + +W+ LW L
Sbjct: 552 IPIVHLSRPDEFSWPYTKDGIYTVKSGYQAIQDWKEDPNKPSTSYKPKNNSVWQKLWHLK 611
Query: 1005 IPPNRLCSCGKFCVKLYQLEQSSETEGW----LVPYCTQDAINT---------LTQIWFA 1145
IPP + ++ + G L P C ++ + Q+WFA
Sbjct: 612 IPPKYTHLIWRILQDALPVQSNLRKRGVNCYPLCPRCKENIEDLNHVFSGCWWAKQVWFA 671
Query: 1146 SNLGVRFQPNRIASFAQWLERNLTQGKRIQMN 1241
S L ++F N SF W+E N+ + + MN
Sbjct: 672 SPLTLKFDQNEF-SFKNWIEDNIRKDQSQNMN 702
Score = 106 bits (264), Expect = 2e-20
Identities = 61/155 (39%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Frame = +2
Query: 53 ETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQL 232
+ K N + MK SKYLG+PT VGRSK+Q FD+I+ VW+K G K H
Sbjct: 290 QIKENIGHILPMKRVNHFSKYLGMPTHVGRSKRQVFDYIQDCVWKKI---KGWKAQHLSF 346
Query: 233 EGRF---------LSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSWQKL 385
GR + +++ FL LC++ E+M+ +FWWGS N +RKIHW+ W +
Sbjct: 347 AGRSTLIKAVAQAIPTYVMSCFLLPK--ELCSHIESMICKFWWGSNNDKRKIHWIKWSTI 404
Query: 386 CKSKYRGGMGFLEAYLTLMNPS*QNKVGDFFITQP 490
CK K +GG+ F E L N + K G ITQP
Sbjct: 405 CKHKKKGGLSFRE--LRAFNEALLAKQGWRCITQP 437
>dbj|GAU42618.1| hypothetical protein TSUD_238110 [Trifolium subterraneum]
Length = 588
Score = 181 bits (458), Expect(2) = 9e-51
Identities = 102/231 (44%), Positives = 138/231 (59%), Gaps = 16/231 (6%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGC-----TVCIL*GNG*QILVGK*EWGKKN 360
IKGWK + S AGR LIK VAQAIPTY M C +C + + ++GK WG
Sbjct: 61 IKGWKAQHLSFAGRSTLIKAVAQAIPTYVMSCFLLPKALC----SHIESMIGKFWWGSN- 115
Query: 361 TLG*LAKAVQIQI*GWNGL----------FRSLSDFNESLLAKQGWRFLHNPTSLIAQCL 510
+ +I W+ + FR L FNE+LLAKQGWR + P + Q L
Sbjct: 116 -----CEKRKIHWIRWSQICKHKKKGGLGFRELRAFNETLLAKQGWRCITQPNCMTTQIL 170
Query: 511 KARYFPRTSFLEAKIGY-SPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQN 687
KA+Y+P+ SFLEA++G + S+TWRSI ASWI+KK GLW +GNGESIKI DNWLP Q+
Sbjct: 171 KAKYYPKKSFLEAEVGNKNVSYTWRSISKASWILKKRGLWNIGNGESIKIWNDNWLPRQH 230
Query: 688 RFKVWSPKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
K+W+PK N + V LM + + W+ +I +F+ FEA QI++ P++
Sbjct: 231 GHKIWTPKGEANQV-WVKDLMIPELRYWNRQLIFDTFMHFEAEQIVQIPIV 280
Score = 50.4 bits (119), Expect(2) = 9e-51
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKI-DTGIWKHLWSLC 1004
+P+ PD + KD +YTV+ Y +QEWK ++ S K D +W+ LW L
Sbjct: 277 IPIVHLVSPDEFSWPCTKDVIYTVKSGYQAIQEWKENYNEQATSYKTNDNRVWQKLWQLK 336
Query: 1005 IPPNRLCSCGKFCVKLYQLEQSSETEG----WLVPYCT---QDAINTLT------QIWFA 1145
IPP + ++++ G L P C +D + + Q+WFA
Sbjct: 337 IPPKYTHLIWRILQDSLPVQKNLRKRGVNCYSLCPRCNDKIEDQNHVFSECWWAKQVWFA 396
Query: 1146 SNLGVRF 1166
S L +RF
Sbjct: 397 SPLTLRF 403
Score = 105 bits (261), Expect = 3e-20
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Frame = +2
Query: 56 TKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLE 235
TK + + M + + SKYLG+PT VGRSK+Q FD+++ VW+K G K H
Sbjct: 16 TKLDISHILPMNKVDQFSKYLGMPTHVGRSKRQVFDYVQDCVWKKI---KGWKAQHLSFA 72
Query: 236 GR---------FLSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSWQKLC 388
GR + +++ FL LC++ E+M+ +FWWGS +RKIHW+ W ++C
Sbjct: 73 GRSTLIKAVAQAIPTYVMSCFLLPK--ALCSHIESMIGKFWWGSNCEKRKIHWIRWSQIC 130
Query: 389 KSKYRGGMGFLEAYLTLMNPS*QNKVGDFFITQP 490
K K +GG+GF E L N + K G ITQP
Sbjct: 131 KHKKKGGLGFRE--LRAFNETLLAKQGWRCITQP 162
>gb|PNX71213.1| ribonuclease H [Trifolium pratense]
Length = 951
Score = 171 bits (434), Expect(2) = 2e-49
Identities = 100/222 (45%), Positives = 129/222 (58%), Gaps = 7/222 (3%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QI--LVGK*EWGKKNTLG 369
+KGWKEK S AGR L+K V QAIPTY M C + + G QI + WG
Sbjct: 356 LKGWKEKNLSYAGRGTLLKAVIQAIPTYIMSCFL-LPKGLCKQIESMTSNFWWGSNTDKK 414
Query: 370 *L-----AKAVQIQI*GWNGLFRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRT 534
L K + + G G FR+ FNE+LLAKQGWR P SL+A+ KA+YFP+
Sbjct: 415 KLHWINWKKMCKNKTQGGYG-FRNTCMFNEALLAKQGWRIATQPDSLVAKVYKAKYFPKC 473
Query: 535 SFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKP 714
F+EAK G S+TWRSI +A WI++KG W +GNGES+ I +D+WLP QN FKVWS +
Sbjct: 474 QFMEAKNGNMLSYTWRSILHARWILQKGCFWTIGNGESVNIWKDSWLPKQNGFKVWSTQQ 533
Query: 715 MGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
V L+ W+ +I FL FEA+QIL+ PL+
Sbjct: 534 GYTRYNLVKDLINPATNQWNQNLIHQIFLPFEANQILQLPLV 575
Score = 55.5 bits (132), Expect(2) = 2e-49
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGI-WKHLWSLC 1004
+PL + N D + G KDG+YTV+ Y EW + S+ I T + W++LW L
Sbjct: 572 LPLVEPNSKDELVWSGTKDGLYTVKSGYHAAMEWNHLRHNQVSSNAIATDLTWQNLWKLK 631
Query: 1005 IPPNRLCSCGKFCVKLYQLEQSSETEG-WLVPYCTQ--DAINTLTQ----------IWFA 1145
IPP + + S ++G P C + ++ T+ +WF
Sbjct: 632 IPPKHATLIWRILNHSLPVRSSLSSKGIQCNPTCPRCNTSLETIDHVFMQCEWAKVVWFG 691
Query: 1146 SNLGVRFQ-PNRIASFAQWLERNL 1214
S + + F +R SF++WL L
Sbjct: 692 SPMTIHFNTTDRHQSFSEWLSTML 715
Score = 98.2 bits (243), Expect = 9e-18
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Frame = +2
Query: 41 LITMETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKH 220
++ E K + M SKYLG+PT +GRSK+Q F++IK RVW+K LK G K+
Sbjct: 306 MVPNEVKVEVNHILPMTRVDHFSKYLGMPTDIGRSKQQIFNYIKDRVWKK--LK-GWKEK 362
Query: 221 HQQLEGR---------FLSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVS 373
+ GR + +++ FL LC E+M + FWWGS ++K+HW++
Sbjct: 363 NLSYAGRGTLLKAVIQAIPTYIMSCFLLPKG--LCKQIESMTSNFWWGSNTDKKKLHWIN 420
Query: 374 WQKLCKSKYRGGMGFLEAYLTLMNPS*QNKVGDFFITQP 490
W+K+CK+K +GG GF + N + K G TQP
Sbjct: 421 WKKMCKNKTQGGYGFRNT--CMFNEALLAKQGWRIATQP 457
Score = 64.7 bits (156), Expect = 4e-07
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Frame = +2
Query: 983 ETFMELMHPPKQAVLLWKILCKAVPVRAKLRNRGVACPLLYPRCH---KHIDPNLVRLK- 1150
+ +L PPK A L+W+IL ++PVR+ L ++G+ C PRC+ + ID ++ +
Sbjct: 625 QNLWKLKIPPKHATLIWRILNHSLPVRSSLSSKGIQCNPTCPRCNTSLETIDHVFMQCEW 684
Query: 1151 -----LGG*VST**NCILCSMA*TKSYSGEKDTNEQ-----IAAIIYSLWLARNAKCFEN 1300
G ++ N + ++ S T Q IAA+ Y +W ARN F++
Sbjct: 685 AKVVWFGSPMTIHFNTTDRHQSFSEWLSTMLKTKNQECMAPIAALTYHIWRARNLLVFQD 744
Query: 1301 KDIPAIVSVRKAFSNLVEFQ---HAVES*GGSASKRTQKSVTNWKTP 1432
K++P + V++A S+ +E+Q H +A+ + + + TNW P
Sbjct: 745 KNVPVMCVVQQAISSSIEYQTLGHPHRLPMCAAATQPRGNNTNWTPP 791
>dbj|GAU51479.1| hypothetical protein TSUD_413680 [Trifolium subterraneum]
Length = 2402
Score = 171 bits (432), Expect(2) = 9e-48
Identities = 98/225 (43%), Positives = 131/225 (58%), Gaps = 11/225 (4%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCT-----VCIL*GNG*QILVGK*EWG--- 351
+KGWKEK S AGR LIK VAQAIPTY M VC + + ++ K W
Sbjct: 1898 LKGWKEKNLSFAGRGTLIKAVAQAIPTYLMSNFLIPKGVC----HQMESMISKLWWASNV 1953
Query: 352 ---KKNTLG*LAKAVQIQI*GWNGLFRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARY 522
K + + Q ++ G FR L FNE+LLAKQGW+ L SL+A+ +KA+Y
Sbjct: 1954 DKRKIHWVNWKTICKQKKLGGMG--FRDLRAFNEALLAKQGWKILTEQNSLMAKTMKAKY 2011
Query: 523 FPRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVW 702
FP+T FL+AK G S+ W+ IQ ASWI+KKG W VGNG++I I D W+ Q+ W
Sbjct: 2012 FPQTQFLQAKKGARSSYIWQDIQQASWILKKGCCWLVGNGQNINIWNDRWINTQDSNTTW 2071
Query: 703 SPKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
SPKP+ L V+ L+ + W+ II+ +FL EA+QIL+ PL
Sbjct: 2072 SPKPLNTTLEQVSDLIDQTSHQWNAQIITQNFLPIEANQILQIPL 2116
Score = 50.4 bits (119), Expect(2) = 9e-48
Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 15/152 (9%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEW--KAQEGKEPESSKIDTGIWKHLWSL 1001
+PL +TN+ D G DG YTV Y W E +P ++ IW LW +
Sbjct: 2114 IPLANTNEEDIVCWQGTNDGNYTVGSGYNAQMTWDTTGSEQAQPSNTLEGEQIWNKLWQI 2173
Query: 1002 CIPPNRLCSCGKFCVKLYQLEQSSETEGWL----VPYCTQDAINT---------LTQIWF 1142
PP +L + ++ + +G L P C Q T +WF
Sbjct: 2174 KAPPKQLHLLWRILNNAIPVKTNLIAKGILCDSICPTCNQSLETTDHTFLQCEWARLVWF 2233
Query: 1143 ASNLGVRFQPNRIASFAQWLERNLTQGKRIQM 1238
S L + + +F+ WL LT M
Sbjct: 2234 GSPLTITTTNAKNQNFSDWLRYMLTNSSSTSM 2265
Score = 91.3 bits (225), Expect = 2e-15
Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Frame = +2
Query: 56 TKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLE 235
TK Q + MK SKYLG PT VGRSKKQ F+ I+ ++W+K LK G K+ +
Sbjct: 1853 TKSAIQQILPMKIVDHYSKYLGQPTHVGRSKKQIFNLIQDKIWKK--LK-GWKEKNLSFA 1909
Query: 236 GR---------FLSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSWQKLC 388
GR + +L+ FL +C E+M+++ WW S +RKIHWV+W+ +C
Sbjct: 1910 GRGTLIKAVAQAIPTYLMSNFLIPKG--VCHQMESMISKLWWASNVDKRKIHWVNWKTIC 1967
Query: 389 KSKYRGGMGF 418
K K GGMGF
Sbjct: 1968 KQKKLGGMGF 1977
Score = 66.2 bits (160), Expect = 1e-07
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 18/144 (12%)
Frame = +2
Query: 995 ELMHPPKQAVLLWKILCKAVPVRAKLRNRGVACPLLYPRC--------HKHIDPNLVRLK 1150
++ PPKQ LLW+IL A+PV+ L +G+ C + P C H + RL
Sbjct: 2172 QIKAPPKQLHLLWRILNNAIPVKTNLIAKGILCDSICPTCNQSLETTDHTFLQCEWARLV 2231
Query: 1151 LGG*VST**NCILCSMA*TKSYS---------GEKDTNEQIAAIIYSLWLARNAKCFENK 1303
G T I + A +++S + + I+ I YS+WLARN K F+N+
Sbjct: 2232 WFGSPLT----ITTTNAKNQNFSDWLRYMLTNSSSTSMQLISTITYSIWLARNKKVFQNQ 2287
Query: 1304 DIPAIVSVRKAFSNLVEFQ-HAVE 1372
PA V +A ++L E+Q H VE
Sbjct: 2288 YTPADEVVARALNSLTEYQKHLVE 2311
>gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]
Length = 1188
Score = 172 bits (436), Expect(2) = 9e-48
Identities = 101/222 (45%), Positives = 129/222 (58%), Gaps = 7/222 (3%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QI--LVGK*EWGKKNTLG 369
+KGWKEK S AGR LIK VAQAIPTY M C + I G Q+ ++ WG
Sbjct: 598 LKGWKEKNLSFAGRGTLIKAVAQAIPTYLMSCFL-IPKGVCEQLEKMICNFWWGSTTDQR 656
Query: 370 *L-----AKAVQIQI*GWNGLFRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRT 534
+ +K + G G FR L FNE+LLAKQGWR + PTSL+AQ LKA+YFP
Sbjct: 657 KMHWLKWSKVCNQKRNGGLG-FRDLRAFNEALLAKQGWRLITKPTSLVAQVLKAKYFPNE 715
Query: 535 SFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKP 714
SFL AK S+TWRSI ASW+IK+G W +G+GE I I EDNW+ ++ PKP
Sbjct: 716 SFLNAKHKQVMSYTWRSIMQASWVIKRGSYWSIGDGEDINIWEDNWMQQKSATYKGRPKP 775
Query: 715 MGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
+L V +LM + W+ II+ FL +EA IL P++
Sbjct: 776 NNLNLIKVKELMDSNYNEWNTDIINQVFLPYEAQMILNIPII 817
Score = 48.9 bits (115), Expect(2) = 9e-48
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 14/139 (10%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+P+ D QPD +DG Y+V+ Y + EW P ++ IW LW L +
Sbjct: 814 IPIIDKTQPDMLTWDCTQDGQYSVKSGYHAIMEWGNLPNASPSNN--SQHIWNVLWKLKV 871
Query: 1008 PPNRLCSCGKFCVKLYQLEQSSETEGW----LVPYCTQDAINTL----------TQIWFA 1145
PP + ++ + G L P C+ +++ T+ Q WFA
Sbjct: 872 PPKHSHLLWRVLHNALPVKNNLFKRGVRCDPLCPRCS-NSMETIHHVFLDCEWAKQTWFA 930
Query: 1146 SNLGVRFQPNRIASFAQWL 1202
S L + N++ F W+
Sbjct: 931 SALTLNLGQNQLTDFYDWI 949
Score = 88.6 bits (218), Expect = 1e-14
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Frame = +2
Query: 44 ITMETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHH 223
+T K + M+ SKYLG+P GRSK+Q F++I++++W+K LK G K+ +
Sbjct: 549 VTNGIKEEISRILPMQISEYFSKYLGMPIVHGRSKQQIFNYIREKIWKK--LK-GWKEKN 605
Query: 224 QQLEGR---------FLSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSW 376
GR + +L+ FL +C E M+ FWWGS +RK+HW+ W
Sbjct: 606 LSFAGRGTLIKAVAQAIPTYLMSCFLIPKG--VCEQLEKMICNFWWGSTTDQRKMHWLKW 663
Query: 377 QKLCKSKYRGGMGFLEAYLTLMNPS*QNKVGDFFITQP 490
K+C K GG+GF + L N + K G IT+P
Sbjct: 664 SKVCNQKRNGGLGFRD--LRAFNEALLAKQGWRLITKP 699
>gb|PNX96408.1| hypothetical protein L195_g019614 [Trifolium pratense]
Length = 548
Score = 172 bits (436), Expect(2) = 9e-48
Identities = 101/222 (45%), Positives = 129/222 (58%), Gaps = 7/222 (3%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QI--LVGK*EWGKKNTLG 369
+KGWKEK S AGR LIK VAQAIPTY M C + I G Q+ ++ WG
Sbjct: 56 LKGWKEKNLSFAGRGTLIKAVAQAIPTYLMSCFL-IPKGVCEQLEKMICNFWWGSTTDQR 114
Query: 370 *L-----AKAVQIQI*GWNGLFRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRT 534
+ +K + G G FR L FNE+LLAKQGWR + PTSL+AQ LKA+YFP
Sbjct: 115 KMHWLKWSKVCNQKRNGGLG-FRDLRAFNEALLAKQGWRLITKPTSLVAQVLKAKYFPNE 173
Query: 535 SFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKP 714
SFL AK S+TWRSI ASW+IK+G W +G+GE I I EDNW+ ++ PKP
Sbjct: 174 SFLNAKHKQVMSYTWRSIMQASWVIKRGSYWSIGDGEDINIWEDNWMQQKSATYKGRPKP 233
Query: 715 MGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
+L V +LM + W+ II+ FL +EA IL P++
Sbjct: 234 NNLNLIKVKELMDSNYNEWNTDIINQVFLPYEAQMILNIPII 275
Score = 48.9 bits (115), Expect(2) = 9e-48
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 14/139 (10%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+P+ D QPD +DG Y+V+ Y + EW P ++ IW LW L +
Sbjct: 272 IPIIDKTQPDMLTWDCTQDGQYSVKSGYHAIMEWGNLPNASPSNN--SQHIWNVLWKLKV 329
Query: 1008 PPNRLCSCGKFCVKLYQLEQSSETEGW----LVPYCTQDAINTL----------TQIWFA 1145
PP + ++ + G L P C+ +++ T+ Q WFA
Sbjct: 330 PPKHSHLLWRVLHNALPVKNNLFKRGVRCDPLCPRCS-NSMETIHHVFLDCEWAKQTWFA 388
Query: 1146 SNLGVRFQPNRIASFAQWL 1202
S L + N++ F W+
Sbjct: 389 SALTLNLGQNQLTDFYDWI 407
Score = 88.6 bits (218), Expect = 7e-15
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Frame = +2
Query: 44 ITMETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHH 223
+T K + M+ SKYLG+P GRSK+Q F++I++++W+K LK G K+ +
Sbjct: 7 VTNGIKEEISRILPMQISEYFSKYLGMPIVHGRSKQQIFNYIREKIWKK--LK-GWKEKN 63
Query: 224 QQLEGR---------FLSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSW 376
GR + +L+ FL +C E M+ FWWGS +RK+HW+ W
Sbjct: 64 LSFAGRGTLIKAVAQAIPTYLMSCFLIPKG--VCEQLEKMICNFWWGSTTDQRKMHWLKW 121
Query: 377 QKLCKSKYRGGMGFLEAYLTLMNPS*QNKVGDFFITQP 490
K+C K GG+GF + L N + K G IT+P
Sbjct: 122 SKVCNQKRNGGLGFRD--LRAFNEALLAKQGWRLITKP 157
>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
Length = 894
Score = 179 bits (454), Expect(2) = 1e-47
Identities = 98/228 (42%), Positives = 128/228 (56%), Gaps = 14/228 (6%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGC----TVCIL*GNG*QILVGK*EWGKKNT 363
IKGWKEK S AG+E LIK VAQAIP Y M C T C + + ++ K WG
Sbjct: 372 IKGWKEKCLSRAGKETLIKSVAQAIPNYIMSCYKLPTGCC---DNIEAMLAKFWWGTTE- 427
Query: 364 LG*LAKAVQIQI*GWNGL----------FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLK 513
K +I WN L FRS DFN++LL KQ WR L NP SL+A+ K
Sbjct: 428 -----KQRKIHWVSWNKLGKAKSKGGLGFRSFEDFNKALLGKQCWRLLQNPDSLLAKVFK 482
Query: 514 ARYFPRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRF 693
+RYFPR+ F++A +GY PS+ WRS+ N+ +I G W +GNG+ + I D WLP Q++F
Sbjct: 483 SRYFPRSKFMDANVGYQPSYAWRSLCNSREVIDVGARWLIGNGKDVHIWNDKWLPAQDKF 542
Query: 694 KVWSPKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
KVWSP V+ L+ + + WD ++ F FEA QIL PL
Sbjct: 543 KVWSPVSNLAPNAMVSDLINLETKMWDKNLVQNCFNSFEAEQILNIPL 590
Score = 41.2 bits (95), Expect(2) = 1e-47
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Frame = +3
Query: 876 EKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCIP---PNRLCSCGKFCV 1046
EK+G ++VR +Y L E + Q E SS+ D +WK +W + +P N L K +
Sbjct: 604 EKNGEFSVRSAYHMLSEIRNQNSPEASSSR-DHLLWKAIWKVKVPNCIKNFLWRLAKAIL 662
Query: 1047 KL-YQLEQSSETEGWLVPYCTQDA---------INTLTQIWFASNLGVRFQPNRIASFAQ 1196
+LE+ T P C D Q+WF+S LG+ PN +
Sbjct: 663 PTRSRLEKKGITLDTTCPLCFNDIECNEHLFMHCPLSKQVWFSSPLGLH-APNNV-GLIS 720
Query: 1197 WLE 1205
W++
Sbjct: 721 WMQ 723
Score = 85.5 bits (210), Expect = 1e-13
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Frame = +2
Query: 80 MDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGRFLSKWL 259
+D+K SKYLGLP GRSKK+ F +++R+W+K +K K+K + L K +
Sbjct: 335 IDVKAVTNHSKYLGLPVIFGRSKKEIFASVQERIWKK--IKGWKEKCLSRAGKETLIKSV 392
Query: 260 LKL---FLHTSWGV---LCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGF 418
+ ++ + + + C EAM+ +FWWG+ +RKIHWVSW KL K+K +GG+GF
Sbjct: 393 AQAIPNYIMSCYKLPTGCCDNIEAMLAKFWWGTTEKQRKIHWVSWNKLGKAKSKGGLGF 451
>gb|PNY07715.1| ribonuclease H [Trifolium pratense]
Length = 1567
Score = 171 bits (432), Expect(2) = 2e-47
Identities = 99/224 (44%), Positives = 130/224 (58%), Gaps = 10/224 (4%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTV-----CIL*GNG*QILVGK*EWG--- 351
+KGWKEK S AGR LIK VAQAIPTY M + C N + + K WG
Sbjct: 957 LKGWKEKNLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGLC----NLLEQMSSKFWWGSNV 1012
Query: 352 --KKNTLG*LAKAVQIQI*GWNGLFRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYF 525
+K K + + G G FR + FNE+LLAKQGWR L P SL+A+ LKA+YF
Sbjct: 1013 DQRKIHWVNWRKTCKQKNQGGMG-FRDIRAFNEALLAKQGWRILTEPNSLVAKILKAKYF 1071
Query: 526 PRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWS 705
P +FL+A G S++W+SIQ ASWI+KKG W V NG++I I ED W+ Q W+
Sbjct: 1072 PHGNFLQATQGKKSSYSWQSIQKASWILKKGCFWLVENGQNINIWEDRWINPQGNSTTWT 1131
Query: 706 PKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
PKP+ +L V L+ +W+ +IS +F EA+QIL+ PL
Sbjct: 1132 PKPINTNLEKVKDLINPTTHTWNEPVISKTFFPIEANQILQIPL 1175
Score = 48.9 bits (115), Expect(2) = 2e-47
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSK--IDTGIWKHLWSL 1001
+PL++T D G KDG YTV+ Y EW E + ++S D W +W++
Sbjct: 1173 IPLSNTMTEDIISWQGTKDGNYTVKSGYNAQMEWANVESSQAQTSNNHKDEPFWNKIWNI 1232
Query: 1002 CIPPNRLCSCGKFCVKLYQLEQSSETEGWLV----PYCTQ--DAINTL-------TQIWF 1142
+PP ++ + ++ + +G L+ P C + + I+ L +WF
Sbjct: 1233 KVPPKQIHLLWRIMHNAIPVKTNLIKKGILIDSLCPRCNKGPETIDHLFLHCEWAHLVWF 1292
Query: 1143 ASNLGVRFQPNRIASFAQWLE 1205
S L ++ ++ +F +W++
Sbjct: 1293 YSPLTIKTTNIQLHTFHEWIK 1313
Score = 97.8 bits (242), Expect = 2e-17
Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Frame = +2
Query: 107 SKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGR---------FLSKWL 259
SKYLG PT +GRSKKQ F FI+ +VW+K LK G K+ + GR + +L
Sbjct: 929 SKYLGQPTVIGRSKKQAFSFIQDKVWKK--LK-GWKEKNLSFAGRGTLIKAVAQAIPTYL 985
Query: 260 LKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGFLEAYLTL 439
+ FL LC E M ++FWWGS +RKIHWV+W+K CK K +GGMGF + +
Sbjct: 986 MSSFLLPKG--LCNLLEQMSSKFWWGSNVDQRKIHWVNWRKTCKQKNQGGMGFRD--IRA 1041
Query: 440 MNPS*QNKVGDFFITQP 490
N + K G +T+P
Sbjct: 1042 FNEALLAKQGWRILTEP 1058
Score = 68.2 bits (165), Expect = 3e-08
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Frame = +2
Query: 1007 PPKQAVLLWKILCKAVPVRAKLRNRGVACPLLYPRCHKH---IDPNLVRLKLGG*V---- 1165
PPKQ LLW+I+ A+PV+ L +G+ L PRC+K ID + + V
Sbjct: 1235 PPKQIHLLWRIMHNAIPVKTNLIKKGILIDSLCPRCNKGPETIDHLFLHCEWAHLVWFYS 1294
Query: 1166 -----ST**NCILCSMA*TKSYSGEKDTNEQ---IAAIIYSLWLARNAKCFENKDIPAIV 1321
+T N L + Y T E +++I YS+W ARN K F+NKDIP
Sbjct: 1295 PLTIKTT--NIQLHTFHEWIKYMLHNTTKESMQILSSITYSIWFARNKKVFQNKDIPVNE 1352
Query: 1322 SVRKAFSNLVEFQH----AVES*GGSASKRTQKSVTNWKTP 1432
+V +A N+ +FQH A + S + T+W P
Sbjct: 1353 TVDRALKNIHDFQHHLTEACFAPTNSKPPSVNRHNTSWNPP 1393
>gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]
Length = 1376
Score = 164 bits (414), Expect(2) = 9e-47
Identities = 96/221 (43%), Positives = 128/221 (57%), Gaps = 6/221 (2%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QI--LVGK*EWGKKNTLG 369
+KGWKEK S AGR LIK VAQAIPTY M C + I G Q+ ++ WG
Sbjct: 783 LKGWKEKNLSFAGRSTLIKAVAQAIPTYLMSCFL-IPKGICDQLEKMICNFWWGSTTDHR 841
Query: 370 *L--AKAVQIQI*GWNGL--FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRTS 537
+ K I NG FR L FNE+LLAKQ WR + NPTSL+AQ LKA+Y+P+
Sbjct: 842 KMHWVKWSNICTQKNNGGLGFRDLRAFNEALLAKQSWRLITNPTSLVAQVLKAKYYPKED 901
Query: 538 FLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKPM 717
L AK + S+TWRSI +WIIK+G W +G+G++ I EDNW+ + +PKP
Sbjct: 902 LLHAKYSKNMSYTWRSIIQTNWIIKRGSYWTIGSGQNTNIWEDNWIQQASSTYKCNPKPN 961
Query: 718 GNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
+LT V +LM + +W II+ F +EA IL+ P++
Sbjct: 962 NLNLTKVQELMDTNNNAWKEDIINQIFQPYEAQMILKIPIM 1002
Score = 53.9 bits (128), Expect(2) = 9e-47
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+P+ D QPD +DG+Y+V+ Y + EW ++ D +WK +W L +
Sbjct: 999 IPIMDKAQPDTLTWDNTQDGIYSVKSGYHSIMEWSHTLNATTSNNSQD--LWKAIWKLNV 1056
Query: 1008 PPNRLCSCGKFCVKLYQLEQSSETEGW----LVPYCTQDAINT---------LTQIWFAS 1148
PP + ++ + G L P CT T Q+WFAS
Sbjct: 1057 PPKHTHLLWRVLKNALPVKNNLFKRGVRCDPLCPRCTNCLETTNHVFLDCEWTKQVWFAS 1116
Query: 1149 NLGVRFQPNRIASFAQWL 1202
+L + N+I W+
Sbjct: 1117 SLNLNLGQNQITDVYDWI 1134
Score = 95.5 bits (236), Expect = 8e-17
Identities = 53/134 (39%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Frame = +2
Query: 44 ITMETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHH 223
+T ETK + + MK SKYLG+P GRSKKQ F+ IK+++WQK LK G K+ +
Sbjct: 734 VTTETKKDVTTILPMKTPEHFSKYLGMPIVYGRSKKQIFNHIKEKIWQK--LK-GWKEKN 790
Query: 224 QQLEGRF---------LSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSW 376
GR + +L+ FL +C E M+ FWWGS RK+HWV W
Sbjct: 791 LSFAGRSTLIKAVAQAIPTYLMSCFLIPKG--ICDQLEKMICNFWWGSTTDHRKMHWVKW 848
Query: 377 QKLCKSKYRGGMGF 418
+C K GG+GF
Sbjct: 849 SNICTQKNNGGLGF 862
>dbj|GAU35043.1| hypothetical protein TSUD_30090 [Trifolium subterraneum]
Length = 1599
Score = 167 bits (422), Expect(2) = 1e-46
Identities = 97/221 (43%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QI--LVGK*EWGK---KN 360
+KGWKE S AGR LIK VAQAIPTY M T I G Q+ ++ + WG K
Sbjct: 1026 LKGWKENYLSFAGRGTLIKAVAQAIPTYLMS-TFIIPKGLCDQMESMMSRFWWGSNVDKR 1084
Query: 361 TLG*LA--KAVQIQI*GWNGLFRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRT 534
+ ++ K + + G G FR L FNE+LLAKQGWR + P SL+A+ LKA+YFP+
Sbjct: 1085 KIHWVSWKKTCKQKKTGGMG-FRDLRAFNEALLAKQGWRIISEPNSLMARTLKAKYFPQQ 1143
Query: 535 SFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKP 714
F +AK G PS++W+SIQ ASWI+KKG W +GNGE+I I ED W+ Q +W+ KP
Sbjct: 1144 GFFQAKQGNRPSYSWQSIQKASWILKKGCFWLIGNGENINIWEDRWINPQEGNTIWTTKP 1203
Query: 715 MGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
+L V L+ W+ ++ +F+ EA+QI + PL
Sbjct: 1204 DNTNLKLVRDLIDSTNHQWNAQLLDQTFIPIEANQIKQIPL 1244
Score = 50.4 bits (119), Expect(2) = 1e-46
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTG--IWKHLWSL 1001
+PL+ + + D G K+G+YTVR Y EW+A+ +P+ S G W LW +
Sbjct: 1242 IPLSSSMEEDIVGWQGTKNGIYTVRSGYNAQMEWEAKHSSQPQPSNYLEGASTWDKLWKI 1301
Query: 1002 CIPPNRLCSCGKFCVKLYQLEQSSETEGWLVPYCTQDAINTLTQIWFASNLGVRFQPNRI 1181
PP +L + ++ + T+G +WF + + ++ +
Sbjct: 1302 KAPPKQLHLLWRILHNAIPVKSNLLTKG------------NFMLVWFGAPITIQTTNIQS 1349
Query: 1182 ASFAQWL 1202
F +WL
Sbjct: 1350 QKFTEWL 1356
Score = 98.2 bits (243), Expect = 1e-17
Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Frame = +2
Query: 107 SKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGR---------FLSKWL 259
SKYLG PT +GRSK Q F+FI+ ++W+K LK G K+++ GR + +L
Sbjct: 998 SKYLGRPTYIGRSKTQVFNFIQDKIWKK--LK-GWKENYLSFAGRGTLIKAVAQAIPTYL 1054
Query: 260 LKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGFLEAYLTL 439
+ F+ LC E+M++RFWWGS +RKIHWVSW+K CK K GGMGF + L
Sbjct: 1055 MSTFIIPKG--LCDQMESMMSRFWWGSNVDKRKIHWVSWKKTCKQKKTGGMGFRD--LRA 1110
Query: 440 MNPS*QNKVGDFFITQP 490
N + K G I++P
Sbjct: 1111 FNEALLAKQGWRIISEP 1127
>ref|XP_015941761.1| uncharacterized protein LOC107467237 [Arachis duranensis]
Length = 238
Score = 147 bits (372), Expect(2) = 2e-46
Identities = 66/140 (47%), Positives = 97/140 (69%)
Frame = +1
Query: 418 FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRTSFLEAKIGYSPSFTWRSIQNA 597
FRS FN++LLAKQGWR + NP SL + LKA+Y+ R F ++ GY+PS+TWR+I
Sbjct: 51 FRSFEAFNQALLAKQGWRLIKNPESLTTRMLKAKYYARKKFTDSDRGYNPSYTWRNIWET 110
Query: 598 SWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKPMGNDLTHVNQLMKEDKQSWDN 777
W+++ GGLW++ +G++ KI D WLP QN FK+WS + + T V+ L+ ++ ++W+
Sbjct: 111 KWVLELGGLWKISSGKNTKIWGDPWLPNQNGFKLWSTRTGFDKETTVDSLINQEDRTWNQ 170
Query: 778 TIISASFLLFEAHQILESPL 837
II+ +FL FEA QILE PL
Sbjct: 171 EIINNTFLPFEAEQILELPL 190
Score = 69.3 bits (168), Expect(2) = 2e-46
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +2
Query: 293 LCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGF 418
LC E +++ F+WGSK GERKIHWV+W+K+CKSK GG+GF
Sbjct: 10 LCCRIERIISNFYWGSKEGERKIHWVAWEKMCKSKEDGGLGF 51
>gb|PNY03092.1| ribonuclease H [Trifolium pratense]
Length = 970
Score = 164 bits (415), Expect(2) = 2e-46
Identities = 100/237 (42%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Frame = +1
Query: 178 GVAKSLIKGWKEKTSSTAGREILIKMVAQAIPTYFMGC-----TVCIL*GNG*QILVGK* 342
G +K+ +KGWKE+ S AGR ILIK VAQAIP Y M VC + ++
Sbjct: 374 GRSKNQLKGWKERNLSFAGRGILIKAVAQAIPNYIMSSFLIPKEVCAQM----EKMICNF 429
Query: 343 EWGKKNTLG*LAKAVQIQI*GWNGL----------FRSLSDFNESLLAKQGWRFLHNPTS 492
WG + +I W + FR L FNE+LLAKQGWR + P+S
Sbjct: 430 WWGSTTD------SRKIHWINWQKICRQKKTGGLGFRELRAFNEALLAKQGWRIICQPSS 483
Query: 493 LIAQCLKARYFPRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNW 672
L+AQ LKA+YFP FL+AK S+TWRSI A WIIKKG W +G GE + I +DNW
Sbjct: 484 LMAQVLKAKYFPNDQFLQAKPKQHMSYTWRSILQARWIIKKGCYWNIGTGEEVDIWKDNW 543
Query: 673 LPMQNRFKVWSPKPMGNDLTH--VNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
+ + WS KP N TH V +M SW+ TII+ FL EA +IL+ P+
Sbjct: 544 IHQKGNSSTWSSKP--NLTTHHKVKDIMNIHNNSWNETIINQLFLPIEAQKILQIPI 598
Score = 52.4 bits (124), Expect(2) = 2e-46
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+P+T T+QPD + G DG YTV+ Y + EW E + +S + IW LW L I
Sbjct: 596 IPITGTSQPDALIWAGTIDGHYTVKSGYQAITEW--SESTQASTSANNDDIWPMLWKLNI 653
Query: 1008 PPNRLCSCGKFCVKLYQLEQSSETEGW----LVPYCTQDAINTL----------TQIWFA 1145
PP + + ++ + +G L P C + + T+ Q+WF+
Sbjct: 654 PPKHSHLLWRALNEAIPVKGNLFKKGVKCDPLCPRCF-NHVETIHHAFLDCVWAKQMWFS 712
Query: 1146 SNLGVRFQPNRIASFAQWL 1202
SNL + + + W+
Sbjct: 713 SNLTINLNHCQHTNLHDWV 731
Score = 82.8 bits (203), Expect = 8e-13
Identities = 47/128 (36%), Positives = 67/128 (52%)
Frame = +2
Query: 107 SKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGRFLSKWLLKLFLHTSW 286
SKYLG+PT +GRSK Q + W++ L + + + + +++ FL
Sbjct: 364 SKYLGMPTFIGRSKNQ------LKGWKERNLSFAGRGILIKAVAQAIPNYIMSSFLIPK- 416
Query: 287 GVLCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGFLEAYLTLMNPS*QNKV 466
+CA E M+ FWWGS RKIHW++WQK+C+ K GG+GF E L N + K
Sbjct: 417 -EVCAQMEKMICNFWWGSTTDSRKIHWINWQKICRQKKTGGLGFRE--LRAFNEALLAKQ 473
Query: 467 GDFFITQP 490
G I QP
Sbjct: 474 GWRIICQP 481
>ref|XP_021838584.1| uncharacterized protein LOC110778326 [Spinacia oleracea]
Length = 1082
Score = 138 bits (348), Expect(3) = 3e-46
Identities = 61/140 (43%), Positives = 91/140 (65%)
Frame = +1
Query: 418 FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRTSFLEAKIGYSPSFTWRSIQNA 597
FR + DFNE++LAKQGWR + NP L + KARYFP F+ A+IG PS+ WRSI +
Sbjct: 571 FRRIVDFNEAMLAKQGWRIMQNPNLLETRVFKARYFPNVDFMNARIGSRPSYIWRSIWGS 630
Query: 598 SWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKPMGNDLTHVNQLMKEDKQSWDN 777
W+I+KG W +G+G+S+KI ED WL F+V S P ++ +V+ L++++ +W
Sbjct: 631 KWVIEKGCRWVIGDGKSVKIWEDQWLDRPPSFRVISTPPTQCNVVYVSDLIQQETNTWKE 690
Query: 778 TIISASFLLFEAHQILESPL 837
++ +FL FEA ++L PL
Sbjct: 691 EVVRQNFLPFEAEEVLAIPL 710
Score = 52.0 bits (123), Expect(3) = 3e-46
Identities = 32/103 (31%), Positives = 38/103 (36%)
Frame = +2
Query: 110 KYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGRFLSKWLLKLFLHTSWG 289
KYLG+PT +GRSK Q F +K+R
Sbjct: 521 KYLGMPTWIGRSKSQAFSSLKER------------------------------------- 543
Query: 290 VLCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGF 418
G K ERKIHWV+W KLC K GG+GF
Sbjct: 544 ---------------GCKEDERKIHWVAWDKLCNLKENGGLGF 571
Score = 46.6 bits (109), Expect(3) = 3e-46
Identities = 42/141 (29%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+PL T D Y K+G+Y+V+ Y + +K EP SS T +WK LW L I
Sbjct: 708 IPLCSTPLDDIYAWYYSKNGIYSVKSGYHFISYYKRVLNGEPSSSAT-TELWKKLWGLQI 766
Query: 1008 PPN------RLCSCG-KFCVKLYQLEQSSETEGWLVPYCTQDAINTL---------TQIW 1139
PP R CS CV L + S ET P C + NT ++W
Sbjct: 767 PPKVRSFLWRACSKALPTCVGLNRRVTSIET---TCPRCGDNEENTFHALVKCPTAMEVW 823
Query: 1140 FASNLGVRFQPNRIASFAQWL 1202
+ L + F+ WL
Sbjct: 824 EEAGLEGVVEGPTCLDFSVWL 844
>gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]
Length = 1068
Score = 166 bits (420), Expect(3) = 6e-46
Identities = 96/220 (43%), Positives = 134/220 (60%), Gaps = 6/220 (2%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QI--LVGK*EWG---KKN 360
+KGWKEK S AG+E LIK VAQAIP+Y M C I G+ I ++ K WG +KN
Sbjct: 743 VKGWKEKCLSKAGKETLIKAVAQAIPSYIMSCYK-IPEGSCANIESMLSKFWWGSSDQKN 801
Query: 361 TLG*LAKAVQIQI*GWNGL-FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYFPRTS 537
+ ++ + GL FR SDFN++LL KQ WR + N SL+++ K++YFPR+
Sbjct: 802 KIHWMSWDRLGRAKNKGGLGFRGFSDFNKALLGKQCWRLMSNEDSLLSRVFKSKYFPRSC 861
Query: 538 FLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWSPKPM 717
FL++K GY PS+ WRS+ NA +I G W +GNG+ +KI +D WLP + FKVWSP
Sbjct: 862 FLKSKCGYQPSYAWRSLFNAKSVIDLGLRWTIGNGQQVKIWKDPWLPELSSFKVWSPVCN 921
Query: 718 GNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
++ V +L+ D + W ++ SF FEA+QIL PL
Sbjct: 922 LDEDAVVAELIDVDLKKWKRELVMNSFNEFEANQILNIPL 961
Score = 36.6 bits (83), Expect(3) = 6e-46
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+PL+ D + E++G Y+VR +Y L+E ++ EP S+ +TGIWK +W +
Sbjct: 959 IPLSWRLPDDKKVWSWERNGNYSVRSAYHLLKEETLRDIPEP-STAGNTGIWKSIWKVQA 1017
Query: 1008 P 1010
P
Sbjct: 1018 P 1018
Score = 33.1 bits (74), Expect(3) = 6e-46
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2
Query: 983 ETFMELMHPPKQAVLLWKILCKAVPVRAKLRNRGVACPLLYPRCH 1117
++ ++ P + LW+++ + +P R +L +GVA + P CH
Sbjct: 1010 KSIWKVQAPQRVKNFLWRVVKRILPTRCRLEQKGVALDPICPLCH 1054
Score = 83.6 bits (205), Expect = 5e-13
Identities = 42/110 (38%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Frame = +2
Query: 107 SKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGRFLSKWL---LKLFLH 277
S+YLGLP GRSKK+ F F++ R+W+K +K K+K + L K + + ++
Sbjct: 715 SRYLGLPVIFGRSKKEVFAFVQDRIWKK--VKGWKEKCLSKAGKETLIKAVAQAIPSYIM 772
Query: 278 TSWGV---LCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGF 418
+ + + CA E+M+++FWWGS + + KIHW+SW +L ++K +GG+GF
Sbjct: 773 SCYKIPEGSCANIESMLSKFWWGSSDQKNKIHWMSWDRLGRAKNKGGLGF 822
>gb|ABN07997.1| contains similarity to reverse trancriptase, related [Medicago
truncatula]
Length = 407
Score = 160 bits (406), Expect(2) = 5e-45
Identities = 93/229 (40%), Positives = 126/229 (55%), Gaps = 11/229 (4%)
Frame = +1
Query: 199 KGWKEKTSSTAGREILIKMVAQAIPTYFMGCTVCIL*GNG*QILVGK*E-------WG-- 351
KGWK+K S GR +LIK VAQAIPTY+M C + + L K E WG
Sbjct: 57 KGWKKKCLSFEGRGVLIKAVAQAIPTYYMSCFMLP------KGLCTKIEKAICSFWWGTT 110
Query: 352 -KKNTLG*LAKAVQIQI*GWNGL-FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYF 525
K + ++K + GL F++L DFN ++LAK+ RF NP SLIA+C KA Y+
Sbjct: 111 DKNKKMHWVSKKKLFRSKHSGGLGFKTLRDFNLAMLAKKVRRFYTNPNSLIAKCFKANYY 170
Query: 526 PRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWS 705
P T L+AK+G PS+ W+SIQNA W+I KG WR+G+G SI I EDNW+P KV +
Sbjct: 171 PHTDILQAKVGNYPSYAWKSIQNAIWVISKGSCWRIGDGGSINIWEDNWVPTYKGLKVMT 230
Query: 706 PKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLLIQIN 852
K + + V L+ + W+ I+ F+ QI PL+ N
Sbjct: 231 TKGPNHFVNRVKDLINNQESLWNKVILEDQFISINIDQISHIPLVNTTN 279
Score = 51.2 bits (121), Expect(2) = 5e-45
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+PL +T PD M G+Y+V+ Y L+ W+ Q+ +S +T IWK +WSL
Sbjct: 272 IPLVNTTNPDSLMWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIWKKIWSLHT 331
Query: 1008 PPNRLCSCGKFCVKLYQLEQSSETEG-WLVPYCTQDAINTLT------------QIWFAS 1148
P + + S G P C + T T ++WF S
Sbjct: 332 IPRHKVLLWRILNDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRVWFGS 391
Query: 1149 NLGVRF 1166
NL + F
Sbjct: 392 NLCINF 397
Score = 87.8 bits (216), Expect = 6e-15
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Frame = +2
Query: 44 ITMETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHH 223
I+ E K Q + +K + KYLG+PT GRSK+Q F FI +R+W+K G KK
Sbjct: 7 ISQEFKEEIQKHLHVKISDGIQKYLGMPTQFGRSKEQDFHFIMERIWKK---HKGWKKKC 63
Query: 224 QQLEGR---------FLSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSW 376
EGR + + + F+ LC E + FWWG+ + +K+HWVS
Sbjct: 64 LSFEGRGVLIKAVAQAIPTYYMSCFMLPKG--LCTKIEKAICSFWWGTTDKNKKMHWVSK 121
Query: 377 QKLCKSKYRGGMGF 418
+KL +SK+ GG+GF
Sbjct: 122 KKLFRSKHSGGLGF 135
>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
Length = 1334
Score = 179 bits (453), Expect(2) = 1e-44
Identities = 101/229 (44%), Positives = 133/229 (58%), Gaps = 15/229 (6%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGC-----TVCIL*GNG*QILVGK*EWGKKN 360
+KGWKEK S AG+EILIK VAQAIP Y MGC + C + ++ K WG K
Sbjct: 751 LKGWKEKCLSRAGKEILIKAVAQAIPNYIMGCYKLPNSCC----QEIETMLAKFWWGSKG 806
Query: 361 TLG*LAKAVQIQI*GWNGL----------FRSLSDFNESLLAKQGWRFLHNPTSLIAQCL 510
+I W L FR +++FN++LL K WR + SL+ +
Sbjct: 807 G------ERKIHWMSWERLSKTKKDGGMGFRGINNFNKALLGKHCWRLMTGEESLMGRIF 860
Query: 511 KARYFPRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNR 690
K+RYFPRTSFLEAKIGY PS+ WRSIQ+A+ ++K G WR+GNGES+KIRED WLP Q
Sbjct: 861 KSRYFPRTSFLEAKIGYQPSYAWRSIQSATDVMKLGTRWRIGNGESVKIREDRWLPNQVG 920
Query: 691 FKVWSPKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
FKVWS + V+ L+ D + W+ ++ +F EA QIL P+
Sbjct: 921 FKVWSRGEELENGALVSALIDPDTKQWNRQLVVQTFYPDEAKQILSIPI 969
Score = 32.0 bits (71), Expect(2) = 1e-44
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEWKAQEGKEPESSKIDTGIWKHLWSLCI 1007
+P++ D + E+DG Y+VR ++ L++ +++ +++ +W+ +W +
Sbjct: 967 IPISQRLPADKIIWHYERDGEYSVRSAHHLLKQHNSRDVAASSGQQMN-NLWREIWKAPV 1025
Query: 1008 P---PNRLCSCGKFCV--------KLYQLE-------QSSETEGWLVPYCTQDAINTLTQ 1133
P N L GK + K Q+E + ET L +C LTQ
Sbjct: 1026 PNRVRNFLWRLGKNILPTRANLVRKGVQIENLCPQCHSAPETIDHLFLHC------HLTQ 1079
Query: 1134 I-WFASNLGVRFQPNRIASFAQWLERNLT 1217
+ WFAS LG R P + WL + LT
Sbjct: 1080 LTWFASQLGARV-PQSVPVHI-WLLQGLT 1106
Score = 94.4 bits (233), Expect = 2e-16
Identities = 55/128 (42%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Frame = +2
Query: 53 ETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQL 232
E K + M +K SKYLGLP GRSKK F F+ RVW+K LK K+K +
Sbjct: 705 EDKDMIRNRMGVKTVDTHSKYLGLPVVFGRSKKIIFSFVIDRVWKK--LKGWKEKCLSRA 762
Query: 233 EGRFLSKWLLKLFLHTSWGV------LCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKS 394
L K + + + G C E M+ +FWWGSK GERKIHW+SW++L K+
Sbjct: 763 GKEILIKAVAQAIPNYIMGCYKLPNSCCQEIETMLAKFWWGSKGGERKIHWMSWERLSKT 822
Query: 395 KYRGGMGF 418
K GGMGF
Sbjct: 823 KKDGGMGF 830
>dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subterraneum]
Length = 1626
Score = 179 bits (454), Expect = 2e-44
Identities = 99/228 (43%), Positives = 129/228 (56%), Gaps = 14/228 (6%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGC----TVCIL*GNG*QILVGK*EWGKKNT 363
IKGWKEK S AG+E LIK VAQAIP Y M C T C + + ++ K WG
Sbjct: 1045 IKGWKEKCLSRAGKETLIKSVAQAIPNYLMSCYKLPTGCC---DNIEAMLAKFWWGTTE- 1100
Query: 364 LG*LAKAVQIQI*GWNGL----------FRSLSDFNESLLAKQGWRFLHNPTSLIAQCLK 513
K +I WN L FRS DFN++LL KQ WR L NP SL+A+ K
Sbjct: 1101 -----KQRKIHWVSWNKLGKAKSKGGLGFRSFEDFNKALLGKQCWRLLQNPDSLLAKVFK 1155
Query: 514 ARYFPRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRF 693
+RYFPR++F++A +GY PS+ WRS+ NA +I G W +GNG+ + I D WLP Q++F
Sbjct: 1156 SRYFPRSNFMDASVGYQPSYAWRSLCNAREVIDMGARWLIGNGQDVHIWNDKWLPEQDKF 1215
Query: 694 KVWSPKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPL 837
KVWSP V+ L+ ++WD +I F FEA QIL P+
Sbjct: 1216 KVWSPVSNLVPNAMVSDLINPVTKAWDKNLILNCFSPFEAEQILNIPI 1263
Score = 82.0 bits (201), Expect = 2e-12
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 6/119 (5%)
Frame = +2
Query: 80 MDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHHQQLEGRFLSKWL 259
+D+K SKYL LP GRSKK+ F +++R+W+K +K K+K + L K +
Sbjct: 1008 IDVKAVTSHSKYLVLPVIFGRSKKEIFANVQERIWKK--IKGWKEKCLSRAGKETLIKSV 1065
Query: 260 LKL---FLHTSWGV---LCAYFEAMVNRFWWGSKNGERKIHWVSWQKLCKSKYRGGMGF 418
+ +L + + + C EAM+ +FWWG+ +RKIHWVSW KL K+K +GG+GF
Sbjct: 1066 AQAIPNYLMSCYKLPTGCCDNIEAMLAKFWWGTTEKQRKIHWVSWNKLGKAKSKGGLGF 1124
>gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]
Length = 1070
Score = 154 bits (389), Expect(2) = 5e-44
Identities = 91/225 (40%), Positives = 126/225 (56%), Gaps = 10/225 (4%)
Frame = +1
Query: 196 IKGWKEKTSSTAGREILIKMVAQAIPTYFMGCT-----VCIL*GNG*QILVGK*EWGKKN 360
+KGWKEK S AGR LIK VAQAIPTY M VC + + ++ WG
Sbjct: 573 LKGWKEKHLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGVC----DQLEKMICNFWWGSST 628
Query: 361 TLG*L-----AKAVQIQI*GWNGLFRSLSDFNESLLAKQGWRFLHNPTSLIAQCLKARYF 525
+ + + ++ G G FR L FNE+LLAKQGWR + P SL+A+ LKA+Y+
Sbjct: 629 DHRKIHWIKWSTVCKHKMEGGIG-FRDLRAFNEALLAKQGWRLITQPDSLVAKILKAKYY 687
Query: 526 PRTSFLEAKIGYSPSFTWRSIQNASWIIKKGGLWRVGNGESIKIREDNWLPMQNRFKVWS 705
P+ FL+A S+TW+SI ASW+IK+G W +G+G+ I I EDNW+ +
Sbjct: 688 PKGEFLKASHKQQMSYTWKSILQASWVIKRGSYWTIGSGQGINIWEDNWIQQKGNPTSTI 747
Query: 706 PKPMGNDLTHVNQLMKEDKQSWDNTIISASFLLFEAHQILESPLL 840
KP L V +LM ++ W+ TII+ F +EAH I + P+L
Sbjct: 748 SKPNNCGLIKVKELMDDNYNDWNVTIINQIFNPYEAHMIQQIPIL 792
Score = 54.3 bits (129), Expect(2) = 5e-44
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 15/139 (10%)
Frame = +3
Query: 828 VPLTDTNQPDCYM*GGEKDGMYTVRPSYIKLQEW-KAQEGKEPESSKIDTGIWKHLWSLC 1004
+P+ D Q D G +DG Y+V+ Y + EW K + SS IWK LW L
Sbjct: 789 IPILDKTQSDILTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLN 848
Query: 1005 IPPNR-----LCSCGKFCVKLYQLEQSSETEGWLVPYCTQDA---------INTLTQIWF 1142
+PP C VK ++ + L P C + ++WF
Sbjct: 849 VPPKHSHFIWRCLSNAIPVKGKLFKKGIRCDP-LCPRCLNHVETIQHVFLECDWAKKVWF 907
Query: 1143 ASNLGVRFQPNRIASFAQW 1199
AS L + N++ F W
Sbjct: 908 ASPLTLNLNSNQLTEFYDW 926
Score = 98.6 bits (244), Expect = 7e-18
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 9/158 (5%)
Frame = +2
Query: 44 ITMETKHNFQGWMDMKEDPRLSKYLGLPTSVGRSKKQGFDFIKKRVWQKA*LKVGKKKHH 223
++ + + + + MK + SKYLG+P ++GRSKKQ F+FI++++W+K LK G K+ H
Sbjct: 524 VSNQIQRDISNILPMKILNQFSKYLGMPVALGRSKKQIFNFIQEKIWKK--LK-GWKEKH 580
Query: 224 QQLEGR---------FLSKWLLKLFLHTSWGVLCAYFEAMVNRFWWGSKNGERKIHWVSW 376
GR + +L+ FL +C E M+ FWWGS RKIHW+ W
Sbjct: 581 LSFAGRGTLIKAVAQAIPTYLMSSFLLPKG--VCDQLEKMICNFWWGSSTDHRKIHWIKW 638
Query: 377 QKLCKSKYRGGMGFLEAYLTLMNPS*QNKVGDFFITQP 490
+CK K GG+GF + L N + K G ITQP
Sbjct: 639 STVCKHKMEGGIGFRD--LRAFNEALLAKQGWRLITQP 674
Score = 64.3 bits (155), Expect = 5e-07
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Frame = +2
Query: 1007 PPKQAVLLWKILCKAVPVRAKLRNRGVACPLLYPRCHKHIDP-NLVRLKLGG*----VST 1171
PPK + +W+ L A+PV+ KL +G+ C L PRC H++ V L+ ++
Sbjct: 850 PPKHSHFIWRCLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAKKVWFAS 909
Query: 1172 **NCILCSMA*TKSY--------SGEKDTNEQIAAIIYSLWLARNAKCFENKDIPAIVSV 1327
L S T+ Y + +K+ E+I AI Y +W RN F+NKD+P
Sbjct: 910 PLTLNLNSNQLTEFYDWFNYMIINTDKECMEKIVAITYEIWNTRNLLVFQNKDLPPQEIS 969
Query: 1328 RKAFSNLVEFQHAVES*G--GSASKRTQKSVTNWKTPNSGKVVAAAAATWSSPG 1483
A L EF+ E S ++ ++ T+W P G + A A SS G
Sbjct: 970 ANALKRLHEFKSFEEQRTPIQKPSHKSCRNNTSWSPPLRGCLKANVDAHLSSDG 1023