BLASTX nr result
ID: Astragalus23_contig00008863
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00008863
(1760 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004511295.1| PREDICTED: RNA pseudouridine synthase 4, mit... 348 e-179
ref|XP_013453291.1| RNA pseudouridine synthase [Medicago truncat... 333 e-170
ref|XP_020237093.1| RNA pseudouridine synthase 4, mitochondrial ... 323 e-170
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit... 322 e-168
gb|KYP45099.1| hypothetical protein KK1_033381 [Cajanus cajan] 317 e-168
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit... 317 e-167
dbj|BAU00859.1| hypothetical protein VIGAN_10249400 [Vigna angul... 313 e-165
ref|XP_017406706.1| PREDICTED: RNA pseudouridine synthase 4, mit... 311 e-164
ref|XP_014520097.1| RNA pseudouridine synthase 4, mitochondrial ... 311 e-163
ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phas... 302 e-161
ref|XP_014633039.1| PREDICTED: RNA pseudouridine synthase 4, mit... 379 e-156
ref|XP_019441369.1| PREDICTED: RNA pseudouridine synthase 4, mit... 300 e-152
ref|XP_015958450.1| RNA pseudouridine synthase 4, mitochondrial ... 298 e-152
ref|XP_014633041.1| PREDICTED: RNA pseudouridine synthase 4, mit... 301 e-151
ref|XP_016197034.1| RNA pseudouridine synthase 4, mitochondrial ... 296 e-150
ref|XP_014633042.1| PREDICTED: RNA pseudouridine synthase 4, mit... 301 e-150
gb|KRH77958.1| hypothetical protein GLYMA_01G244300 [Glycine max] 301 e-147
dbj|GAU29527.1| hypothetical protein TSUD_115490 [Trifolium subt... 298 e-147
ref|XP_013453292.1| RNA pseudouridine synthase [Medicago truncat... 296 e-146
dbj|GAV62308.1| PseudoU_synth_2 domain-containing protein [Cepha... 277 e-144
>ref|XP_004511295.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Cicer
arietinum]
Length = 458
Score = 348 bits (893), Expect(2) = e-179
Identities = 177/246 (71%), Positives = 200/246 (81%), Gaps = 3/246 (1%)
Frame = +2
Query: 53 LRPLSRDCHLSADDGKWLRLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVHK 232
+R SR CH+SADD KWL LP VSATVK+S N+VSSS ST+ALKWV +CCP IP+TLVHK
Sbjct: 40 VRSWSRQCHMSADDAKWLTLPAVSATVKSSSNEVSSSSSTTALKWVTQCCPQIPKTLVHK 99
Query: 233 LFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKET---PAAAKHECHVTAK 403
LFRLRQVRMLP + + K+VGAKDTLNSGDRIFLP+SVK+ K +T K
Sbjct: 100 LFRLRQVRMLPNSPLIADKLKRVGAKDTLNSGDRIFLPNSVKQQHQHQQTPKQPLTLTPK 159
Query: 404 EINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLD 583
+I F+R LVIYKDPAT+VLNKPPGMPVQGGINIK SLD +A + L Y+YS+PPRLVHRLD
Sbjct: 160 QIKFMRSLVIYKDPATVVLNKPPGMPVQGGINIKWSLDALAASSLNYDYSQPPRLVHRLD 219
Query: 584 RDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGF 763
RDCSGILVMGRTQTS VLHSIFR+KTS+ASD TEKRILQRRYWALVIG PRRS G
Sbjct: 220 RDCSGILVMGRTQTSTVVLHSIFRDKTSRASDH-NDTEKRILQRRYWALVIGRPRRSGGL 278
Query: 764 ITAPLG 781
IT+PLG
Sbjct: 279 ITSPLG 284
Score = 310 bits (794), Expect(2) = e-179
Identities = 150/176 (85%), Positives = 165/176 (93%), Gaps = 2/176 (1%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRITI+++STL+SSQHA+TEYRVLGSSS+GYTWLELSPLTGRKHQLRVH
Sbjct: 283 LGKVVVDNGKSDRITIVNNSTLVSSQHAVTEYRVLGSSSDGYTWLELSPLTGRKHQLRVH 342
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAHKKWGHFDL NLEDS+EEL+KEETLPFGLNL KGSIS+K P
Sbjct: 343 CAEVLGTPIVGDYKYGWQAHKKWGHFDLCNLEDSTEELLKEETLPFGLNLNKGSISDKHP 402
Query: 1131 RLHLHCKQIVLPNISQALKNVQSV--SNYDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
RLHLHCKQI+LPNISQAL++VQS+ SN DLSVVE L L+ +LPPYMQRSWDVTNS
Sbjct: 403 RLHLHCKQIILPNISQALQDVQSLSASNCDLSVVEALKLEAELPPYMQRSWDVTNS 458
>ref|XP_013453291.1| RNA pseudouridine synthase [Medicago truncatula]
gb|KEH27321.1| RNA pseudouridine synthase [Medicago truncatula]
Length = 430
Score = 333 bits (853), Expect(2) = e-170
Identities = 174/250 (69%), Positives = 195/250 (78%), Gaps = 6/250 (2%)
Frame = +2
Query: 50 WLRPLSRDCHLSADDGKWLRLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVH 229
W R A+DGKWL LPPVS TV TS SSS ST ALKWVIRCCP +P+TL+H
Sbjct: 12 WSRRRQLSSSAVAEDGKWLTLPPVSTTVNTS----SSSTSTPALKWVIRCCPELPKTLIH 67
Query: 230 KLFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKE----TPAAAKHECHVT 397
KLFRL+QVRMLP QD ++FK+V KDTLNSGDRIFLP+SVK+ TP KHE +T
Sbjct: 68 KLFRLKQVRMLPRQ-QDDNKFKRVTPKDTLNSGDRIFLPNSVKQQIPLTPTPPKHESPLT 126
Query: 398 --AKEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLV 571
AK+INFIR LVIYKDP LVLNKPPGMPVQGGINIK SLD VA L Y+YS+PPRLV
Sbjct: 127 LTAKQINFIRSLVIYKDPHILVLNKPPGMPVQGGINIKLSLDAVAAQSLNYDYSQPPRLV 186
Query: 572 HRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRR 751
HRLDRDCSGILVMGRT+TS A+LHSIFREKTS+AS++ TEK ILQRRYWALV+G PRR
Sbjct: 187 HRLDRDCSGILVMGRTKTSTALLHSIFREKTSRASNEENDTEKIILQRRYWALVLGCPRR 246
Query: 752 SKGFITAPLG 781
S G + APLG
Sbjct: 247 SGGVVNAPLG 256
Score = 296 bits (758), Expect(2) = e-170
Identities = 144/176 (81%), Positives = 161/176 (91%), Gaps = 2/176 (1%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRITI+D+S LLSSQHA+TEYRV+ SSS+G+TWLELSPLTGRKHQLRVH
Sbjct: 255 LGKVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSPLTGRKHQLRVH 314
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYG QAHKKWG FD SNLEDS+EE +KEE LPFGLNL KGSIS+K P
Sbjct: 315 CAEVLGTPIVGDYKYGRQAHKKWGQFDFSNLEDSTEEHLKEEALPFGLNLNKGSISDKHP 374
Query: 1131 RLHLHCKQIVLPNISQALKNVQSV--SNYDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
RLHLHCKQIVLPNISQAL+NVQSV S+YDLS VE+L+L+ DLPPYM++SW+VTNS
Sbjct: 375 RLHLHCKQIVLPNISQALQNVQSVSDSSYDLSAVESLELEADLPPYMKKSWEVTNS 430
>ref|XP_020237093.1| RNA pseudouridine synthase 4, mitochondrial [Cajanus cajan]
Length = 428
Score = 323 bits (828), Expect(2) = e-170
Identities = 168/247 (68%), Positives = 192/247 (77%), Gaps = 19/247 (7%)
Frame = +2
Query: 98 KWLRLPPVSATVKTS------------------ENQVSSSGSTSALKWVIRCCPHIPRTL 223
KWL LPPV++T ENQ+SS+ T+ALKWV+RCCP++PR L
Sbjct: 13 KWLTLPPVTSTATMEVKAKVKAKAMALALALGKENQISST-PTTALKWVVRCCPNLPRAL 71
Query: 224 VHKLFRLRQVRMLPAAVQDHH-RFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTA 400
VHKLFRLRQVR+L + HH FK+V AKDTLN+GDRI LP SVK+TP KH H+T+
Sbjct: 72 VHKLFRLRQVRILSPSSHSHHPTFKRVAAKDTLNTGDRILLPQSVKQTPTH-KHHSHLTS 130
Query: 401 KEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRL 580
++INFIR LVIYKDPA LVLNKPPGMPVQGGINIKRSLDVVA + L YEYSEPPRLVHRL
Sbjct: 131 QQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKRSLDVVAASSLNYEYSEPPRLVHRL 190
Query: 581 DRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKG 760
DRDCSGILVMGRTQ SA +LHSIFREKTS+A +DIG EKRILQR+YWALV+G PRR KG
Sbjct: 191 DRDCSGILVMGRTQASATLLHSIFREKTSRALNDIGK-EKRILQRKYWALVLGCPRRPKG 249
Query: 761 FITAPLG 781
+TA LG
Sbjct: 250 LVTASLG 256
Score = 305 bits (781), Expect(2) = e-170
Identities = 147/174 (84%), Positives = 160/174 (91%), Gaps = 1/174 (0%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNG+SDRITI+D+ST++SSQHAITEYRV+ SSS GYTWLELSPLTGRKHQLRVH
Sbjct: 255 LGKVVVDNGRSDRITIVDNSTIMSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVH 314
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDS-SEELVKEETLPFGLNLTKGSISEKQ 1127
CAEVLGTPIVGDYKYGWQAH+KWGHFDLSN++DS EEL+KEETLPFGLNL KGSISE
Sbjct: 315 CAEVLGTPIVGDYKYGWQAHRKWGHFDLSNVDDSREEELLKEETLPFGLNLKKGSISENH 374
Query: 1128 PRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
PRLHLHCKQIVLPNISQAL+NVQS SN DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 375 PRLHLHCKQIVLPNISQALQNVQSASNCDLSLVEGLELAADLPPYMQRSWDVTN 428
>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
[Glycine max]
gb|KHN30421.1| RNA pseudourine synthase 4, mitochondrial [Glycine soja]
gb|KRH77957.1| hypothetical protein GLYMA_01G244300 [Glycine max]
Length = 427
Score = 322 bits (826), Expect(2) = e-168
Identities = 169/234 (72%), Positives = 188/234 (80%), Gaps = 4/234 (1%)
Frame = +2
Query: 92 DGKWLRLPPVSATVKTSE--NQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLP 265
+ KWL LPPVSA+ S NQ+SS+ T+ALKWV+RCCPH+PR LVHKLFRLRQVR+ P
Sbjct: 28 EDKWLTLPPVSASSSASVELNQLSST-PTTALKWVVRCCPHLPRALVHKLFRLRQVRIHP 86
Query: 266 AAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAKEINFIRGLVIYK 439
A V FK+V AKDTLN+GDRI LP SVK +TP + H+T ++INFIR LVIYK
Sbjct: 87 ATVIQQQTFKRVAAKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVIYK 142
Query: 440 DPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRT 619
DPA LVLNKPPGMPVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMGRT
Sbjct: 143 DPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRT 202
Query: 620 QTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
TS VLHSIFREKTS+ASDDIG EKRILQRRYWALV+G PRR KG +TA LG
Sbjct: 203 HTSTTVLHSIFREKTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLG 255
Score = 301 bits (771), Expect(2) = e-168
Identities = 143/173 (82%), Positives = 157/173 (90%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNG+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVH
Sbjct: 254 LGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVH 313
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE P
Sbjct: 314 CAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHP 373
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQ+VLPNISQAL+NVQS S+ DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 374 RLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 426
>gb|KYP45099.1| hypothetical protein KK1_033381 [Cajanus cajan]
Length = 403
Score = 317 bits (811), Expect(2) = e-168
Identities = 160/214 (74%), Positives = 182/214 (85%), Gaps = 1/214 (0%)
Frame = +2
Query: 143 ENQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLPAAVQDHH-RFKKVGAKDTL 319
ENQ+SS+ T+ALKWV+RCCP++PR LVHKLFRLRQVR+L + HH FK+V AKDTL
Sbjct: 21 ENQISST-PTTALKWVVRCCPNLPRALVHKLFRLRQVRILSPSSHSHHPTFKRVAAKDTL 79
Query: 320 NSGDRIFLPDSVKETPAAAKHECHVTAKEINFIRGLVIYKDPATLVLNKPPGMPVQGGIN 499
N+GDRI LP SVK+TP KH H+T+++INFIR LVIYKDPA LVLNKPPGMPVQGGIN
Sbjct: 80 NTGDRILLPQSVKQTPTH-KHHSHLTSQQINFIRTLVIYKDPAILVLNKPPGMPVQGGIN 138
Query: 500 IKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASD 679
IKRSLDVVA + L YEYSEPPRLVHRLDRDCSGILVMGRTQ SA +LHSIFREKTS+A +
Sbjct: 139 IKRSLDVVAASSLNYEYSEPPRLVHRLDRDCSGILVMGRTQASATLLHSIFREKTSRALN 198
Query: 680 DIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
DIG EKRILQR+YWALV+G PRR KG +TA LG
Sbjct: 199 DIGK-EKRILQRKYWALVLGCPRRPKGLVTASLG 231
Score = 305 bits (781), Expect(2) = e-168
Identities = 147/174 (84%), Positives = 160/174 (91%), Gaps = 1/174 (0%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNG+SDRITI+D+ST++SSQHAITEYRV+ SSS GYTWLELSPLTGRKHQLRVH
Sbjct: 230 LGKVVVDNGRSDRITIVDNSTIMSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVH 289
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDS-SEELVKEETLPFGLNLTKGSISEKQ 1127
CAEVLGTPIVGDYKYGWQAH+KWGHFDLSN++DS EEL+KEETLPFGLNL KGSISE
Sbjct: 290 CAEVLGTPIVGDYKYGWQAHRKWGHFDLSNVDDSREEELLKEETLPFGLNLKKGSISENH 349
Query: 1128 PRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
PRLHLHCKQIVLPNISQAL+NVQS SN DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 350 PRLHLHCKQIVLPNISQALQNVQSASNCDLSLVEGLELAADLPPYMQRSWDVTN 403
>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
[Glycine max]
gb|KRH77956.1| hypothetical protein GLYMA_01G244300 [Glycine max]
Length = 429
Score = 317 bits (813), Expect(2) = e-167
Identities = 169/236 (71%), Positives = 188/236 (79%), Gaps = 6/236 (2%)
Frame = +2
Query: 92 DGKWLRLPPVSATVKTSE--NQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLP 265
+ KWL LPPVSA+ S NQ+SS+ T+ALKWV+RCCPH+PR LVHKLFRLRQVR+ P
Sbjct: 28 EDKWLTLPPVSASSSASVELNQLSST-PTTALKWVVRCCPHLPRALVHKLFRLRQVRIHP 86
Query: 266 AAVQDHHRFKKV--GAKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAKEINFIRGLVI 433
A V FK+V AKDTLN+GDRI LP SVK +TP + H+T ++INFIR LVI
Sbjct: 87 ATVIQQQTFKRVRVAAKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVI 142
Query: 434 YKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMG 613
YKDPA LVLNKPPGMPVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMG
Sbjct: 143 YKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMG 202
Query: 614 RTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
RT TS VLHSIFREKTS+ASDDIG EKRILQRRYWALV+G PRR KG +TA LG
Sbjct: 203 RTHTSTTVLHSIFREKTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLG 257
Score = 301 bits (771), Expect(2) = e-167
Identities = 143/173 (82%), Positives = 157/173 (90%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNG+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVH
Sbjct: 256 LGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVH 315
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE P
Sbjct: 316 CAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHP 375
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQ+VLPNISQAL+NVQS S+ DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 376 RLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 428
>dbj|BAU00859.1| hypothetical protein VIGAN_10249400 [Vigna angularis var.
angularis]
Length = 440
Score = 313 bits (802), Expect(2) = e-165
Identities = 173/263 (65%), Positives = 199/263 (75%), Gaps = 15/263 (5%)
Frame = +2
Query: 38 WRWRWLRPLSRDCHLSAD---DGKWLRLPPVSATV--------KTSENQVSSSGSTSALK 184
W +R LR R +LSA + KWL LPPV+A+ K NQ+SS+ ST+ALK
Sbjct: 11 WMFRALRSGRR--YLSAGRQREEKWLTLPPVAASATVEVNGKRKGKGNQLSST-STTALK 67
Query: 185 WVIRCCPHIPRTLVHKLFRLRQVRML--PAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK 358
W++RCCP++P +L+HKLFRLRQVR+L P K+V AK TLN+GDRI LP SV+
Sbjct: 68 WIVRCCPNLPISLLHKLFRLRQVRLLSPPHMDMQQQTLKRVAAKYTLNAGDRILLPQSVQ 127
Query: 359 ETPAAAKHECH--VTAKEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGA 532
+ P H+ H +T ++INFIR LVIYKDPA LVLNKPPGMPVQGGINIK SLDVVA A
Sbjct: 128 QKPTPT-HKPHSPLTPQQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKHSLDVVAAA 186
Query: 533 CLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQ 712
CL YEYSEPPRLVHRLDRDCSGILVMGRTQTS VLHSIFREKTS+A DDIG EKRILQ
Sbjct: 187 CLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDIGE-EKRILQ 245
Query: 713 RRYWALVIGSPRRSKGFITAPLG 781
RRYWALV+G PRRSKG +TA LG
Sbjct: 246 RRYWALVLGCPRRSKGLVTASLG 268
Score = 300 bits (767), Expect(2) = e-165
Identities = 145/173 (83%), Positives = 155/173 (89%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKS+RIT++D+S LSSQHAITEYRV+ SSS GYTWLELSPLTGRKHQLRVH
Sbjct: 267 LGKVVVDNGKSERITVVDNSASLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVH 326
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWG FDLSN+EDS EEL+KEETLPFGLNL GSISE P
Sbjct: 327 CAEVLGTPIVGDYKYGWQAHRKWGGFDLSNVEDSCEELLKEETLPFGLNLNNGSISENHP 386
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQIVLPNISQAL+NVQS SN DLS VE L+L DLPPYMQRSWDVTN
Sbjct: 387 RLHLHCKQIVLPNISQALQNVQSFSNCDLSQVEGLELVADLPPYMQRSWDVTN 439
>ref|XP_017406706.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Vigna
angularis]
gb|KOM26639.1| hypothetical protein LR48_Vigan303s006100 [Vigna angularis]
Length = 440
Score = 311 bits (796), Expect(2) = e-164
Identities = 172/263 (65%), Positives = 198/263 (75%), Gaps = 15/263 (5%)
Frame = +2
Query: 38 WRWRWLRPLSRDCHLSAD---DGKWLRLPPVSATV--------KTSENQVSSSGSTSALK 184
W +R LR R +LSA + KWL LPPV+A+ K NQ+SS+ ST+ALK
Sbjct: 11 WMFRALRSGRR--YLSAGRQREEKWLTLPPVAASATVEVNGKRKGKGNQLSST-STTALK 67
Query: 185 WVIRCCPHIPRTLVHKLFRLRQVRML--PAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK 358
W++RCCP++P +L+HKLFRLRQVR+L P K+V AK TLN+GDRI LP SV+
Sbjct: 68 WIVRCCPNLPISLLHKLFRLRQVRLLSPPHMDMQQQTLKRVAAKYTLNAGDRILLPQSVQ 127
Query: 359 ETPAAAKHECH--VTAKEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGA 532
+ P H+ H +T ++INFIR LVIYKDPA LVLNKPPG PVQGGINIK SLDVVA A
Sbjct: 128 QKPTPT-HKPHSPLTPQQINFIRTLVIYKDPAILVLNKPPGSPVQGGINIKHSLDVVAAA 186
Query: 533 CLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQ 712
CL YEYSEPPRLVHRLDRDCSGILVMGRTQTS VLHSIFREKTS+A DDIG EKRILQ
Sbjct: 187 CLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDIGE-EKRILQ 245
Query: 713 RRYWALVIGSPRRSKGFITAPLG 781
RRYWALV+G PRRSKG +TA LG
Sbjct: 246 RRYWALVLGCPRRSKGLVTASLG 268
Score = 300 bits (767), Expect(2) = e-164
Identities = 145/173 (83%), Positives = 155/173 (89%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKS+RIT++D+S LSSQHAITEYRV+ SSS GYTWLELSPLTGRKHQLRVH
Sbjct: 267 LGKVVVDNGKSERITVVDNSASLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVH 326
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWG FDLSN+EDS EEL+KEETLPFGLNL GSISE P
Sbjct: 327 CAEVLGTPIVGDYKYGWQAHRKWGGFDLSNVEDSCEELLKEETLPFGLNLNNGSISENHP 386
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQIVLPNISQAL+NVQS SN DLS VE L+L DLPPYMQRSWDVTN
Sbjct: 387 RLHLHCKQIVLPNISQALQNVQSFSNCDLSQVEGLELVADLPPYMQRSWDVTN 439
>ref|XP_014520097.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Vigna
radiata var. radiata]
Length = 440
Score = 311 bits (798), Expect(2) = e-163
Identities = 171/263 (65%), Positives = 197/263 (74%), Gaps = 15/263 (5%)
Frame = +2
Query: 38 WRWRWLRPLSRDCHLSAD---DGKWLRLPPVSATV--------KTSENQVSSSGSTSALK 184
W +R LR R HLSA + KWL LPPV+AT K NQ+SS+ ST+ALK
Sbjct: 11 WMFRALRSGRR--HLSAGRQLEEKWLTLPPVAATATVEVNGKRKGKGNQLSST-STTALK 67
Query: 185 WVIRCCPHIPRTLVHKLFRLRQVRML--PAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVK 358
W++RCCP++P +L+HKLFRLRQVR+L P K+V AK TLN+GDRI LP SV+
Sbjct: 68 WIVRCCPNLPISLLHKLFRLRQVRLLSPPHMDMQQQTLKRVAAKYTLNAGDRILLPQSVQ 127
Query: 359 ETPAAAKHECH--VTAKEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGA 532
+ P H+ H +T ++INFIR VI+KDPA LVLNKPPGMPVQGGINIK SLD VA A
Sbjct: 128 QKPTPT-HKPHSPLTPQQINFIRKFVIFKDPAILVLNKPPGMPVQGGINIKHSLDAVAAA 186
Query: 533 CLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQ 712
CL YEYSEPPRLVHRLDRDCSG+LVMGRTQTS VLHSIFREKTS+A DDIG EKRILQ
Sbjct: 187 CLNYEYSEPPRLVHRLDRDCSGLLVMGRTQTSTTVLHSIFREKTSRALDDIGE-EKRILQ 245
Query: 713 RRYWALVIGSPRRSKGFITAPLG 781
RRYWALV+G PRRSKG +TA LG
Sbjct: 246 RRYWALVLGCPRRSKGLVTASLG 268
Score = 295 bits (756), Expect(2) = e-163
Identities = 144/173 (83%), Positives = 153/173 (88%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRIT++D+S LSSQHAITEYRV+ SSS GYTWLELSPLTGRKHQLRVH
Sbjct: 267 LGKVVVDNGKSDRITVVDNSASLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVH 326
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH++WG FDLSN+EDS EEL KEETLPFGLNL GSISE P
Sbjct: 327 CAEVLGTPIVGDYKYGWQAHRQWGGFDLSNVEDSCEELFKEETLPFGLNLNNGSISENHP 386
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQIVLPNISQAL+NVQS SN DLS VE L+L DLP YMQRSWDVTN
Sbjct: 387 RLHLHCKQIVLPNISQALQNVQSFSNCDLSQVERLELVADLPLYMQRSWDVTN 439
>ref|XP_007157229.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
Length = 432
Score = 302 bits (773), Expect(2) = e-161
Identities = 165/258 (63%), Positives = 190/258 (73%), Gaps = 10/258 (3%)
Frame = +2
Query: 38 WRWRWLRPLSRDCHLSAD-DGKWLRLPPVSAT--------VKTSENQVSSSGSTSALKWV 190
W +R LR R ++ + KWL LPPV+A+ K N+VSS+ T+ALKW+
Sbjct: 7 WMFRALRSGRRQMSMARKWEEKWLTLPPVAASGSVEVKGKTKGKGNEVSST-PTTALKWI 65
Query: 191 IRCCPHIPRTLVHKLFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPA 370
+RCCP P +L+HKLFRLRQVR+L + K+V AKDTLNSGDRI LP SV++ P
Sbjct: 66 VRCCPSAPISLLHKLFRLRQVRVLSPPHTE--TLKRVAAKDTLNSGDRILLPQSVQQKPT 123
Query: 371 AA-KHECHVTAKEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYE 547
K +T ++INFIR LVI+KDPA LVLNKPPGMPVQGGINIK SLDVVA ACL YE
Sbjct: 124 PTRKPHSSLTPQQINFIRTLVIHKDPAILVLNKPPGMPVQGGINIKHSLDVVAAACLNYE 183
Query: 548 YSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWA 727
YSEPPRLVHRLDRDCSGILVMGRTQTS VLHSIFREKTS+A DD EKRILQRRYWA
Sbjct: 184 YSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDT-EEEKRILQRRYWA 242
Query: 728 LVIGSPRRSKGFITAPLG 781
LV+G PR SKG +TA LG
Sbjct: 243 LVLGRPRCSKGLVTASLG 260
Score = 296 bits (758), Expect(2) = e-161
Identities = 142/173 (82%), Positives = 156/173 (90%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRIT++D+ST LSSQHAITEYRV+ SSS GYTWLELSPLTGRKHQLRVH
Sbjct: 259 LGKVVVDNGKSDRITVVDNSTSLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVH 318
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWG+FDLSN+EDS EE +KEETLPFGLNL GSISE +P
Sbjct: 319 CAEVLGTPIVGDYKYGWQAHRKWGNFDLSNVEDSCEEHLKEETLPFGLNLNNGSISENRP 378
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCK+IVLPNIS+AL+NVQS SN DLS VE L L DLPPYMQRSWD+T+
Sbjct: 379 RLHLHCKKIVLPNISEALQNVQSFSNCDLSQVEGLQLVADLPPYMQRSWDITS 431
>ref|XP_014633039.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X3
[Glycine max]
Length = 423
Score = 379 bits (974), Expect(2) = e-156
Identities = 185/236 (78%), Positives = 203/236 (86%)
Frame = +3
Query: 582 TEIVLEFW*WEGHKQVLLFCIPSSGRKLPRLQMILAVQKRESFKEGIGHWSSDLLDVQRA 761
TE VL FW WEGH V CIPSS RKLP QMILA ++RE +KEG GHWS D+LDVQR
Sbjct: 188 TETVLAFWSWEGHTPVQQSCIPSSARKLPGRQMILA-KRREYYKEGTGHWSLDVLDVQRG 246
Query: 762 SLLLHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQL 941
LLH VVVDNG+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQL
Sbjct: 247 WSLLHWVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQL 306
Query: 942 RVHCAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISE 1121
RVHCAEVLGTPIVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE
Sbjct: 307 RVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISE 366
Query: 1122 KQPRLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
PRLHLHCKQ+VLPNISQAL+NVQS S+ DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 367 NHPRLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 422
Score = 203 bits (517), Expect(2) = e-156
Identities = 110/165 (66%), Positives = 126/165 (76%), Gaps = 6/165 (3%)
Frame = +2
Query: 92 DGKWLRLPPVSATVKTSE--NQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLP 265
+ KWL LPPVSA+ S NQ+SS+ T+ALKWV+RCCPH+PR LVHKLFRLRQVR+ P
Sbjct: 28 EDKWLTLPPVSASSSASVELNQLSST-PTTALKWVVRCCPHLPRALVHKLFRLRQVRIHP 86
Query: 266 AAVQDHHRFKKV--GAKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAKEINFIRGLVI 433
A V FK+V AKDTLN+GDRI LP SVK +TP + H+T ++INFIR LVI
Sbjct: 87 ATVIQQQTFKRVRVAAKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVI 142
Query: 434 YKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRL 568
YKDPA LVLNKPPGMPVQGGINIKRSLD VA A L Y YS+PPRL
Sbjct: 143 YKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRL 187
>ref|XP_019441369.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Lupinus angustifolius]
ref|XP_019444510.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Lupinus angustifolius]
Length = 412
Score = 300 bits (768), Expect(2) = e-152
Identities = 158/237 (66%), Positives = 181/237 (76%), Gaps = 9/237 (3%)
Frame = +2
Query: 98 KWLRLPPVSATVKTSEN--QVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLPAA 271
KWL LPP T+ +N Q+SS + +ALKWV RCCP IP+TLVHKLFRLRQVR P
Sbjct: 5 KWLTLPPFIPTLVNVKNGNQISSPSTITALKWVTRCCPQIPKTLVHKLFRLRQVRTQPP- 63
Query: 272 VQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAA---KHECH----VTAKEINFIRGLV 430
+H FK++ KDTLNSGD IFLP SVK+TP KH H +T K+INFIR L+
Sbjct: 64 --NHTSFKRLSPKDTLNSGDLIFLPQSVKQTPPPTHKHKHLSHSHPPLTDKQINFIRTLL 121
Query: 431 IYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVM 610
IYKDPA LVLNKPPG+PVQGGINIK SLDV+A A L Y+YSEPPRLVHRLDRDCSGILVM
Sbjct: 122 IYKDPALLVLNKPPGLPVQGGINIKHSLDVLAAASLNYDYSEPPRLVHRLDRDCSGILVM 181
Query: 611 GRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
RT TSA +LHSIFR+KTS AS +I +T+K ILQRRYWA+VIG PRR KG +TA LG
Sbjct: 182 ARTHTSATILHSIFRDKTSTASHNI-ATDKTILQRRYWAMVIGCPRRPKGLVTASLG 237
Score = 270 bits (690), Expect(2) = e-152
Identities = 136/179 (75%), Positives = 155/179 (86%), Gaps = 5/179 (2%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRIT++D ST +SSQHA+TEY+V+GSSSNGYTWLELSPLTGRKHQLRVH
Sbjct: 236 LGKVVVDNGKSDRITVVDKSTSVSSQHAVTEYKVIGSSSNGYTWLELSPLTGRKHQLRVH 295
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEET---LPFGLNLTKGSISE 1121
CAEVLGTPIVGDYKYGWQAHKKWG F+ + EDSSEEL+KEET LPFGLN+ KGSI E
Sbjct: 296 CAEVLGTPIVGDYKYGWQAHKKWGLFE--DEEDSSEELLKEETETLLPFGLNMKKGSICE 353
Query: 1122 KQPRLHLHCKQIVLPNISQALKNVQSVS--NYDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
K+PRLHLHCKQIVLPNI ++L+NV+S S + DL VE+L+L LPPYMQRSW+ TNS
Sbjct: 354 KRPRLHLHCKQIVLPNICESLQNVESGSSRSCDLLGVESLELVAALPPYMQRSWEFTNS 412
>ref|XP_015958450.1| RNA pseudouridine synthase 4, mitochondrial [Arachis duranensis]
Length = 421
Score = 298 bits (762), Expect(2) = e-152
Identities = 156/239 (65%), Positives = 178/239 (74%)
Frame = +2
Query: 65 SRDCHLSADDGKWLRLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRL 244
+R ++ ++ KW LPP S T + S+S ST+ALKWV+RCCPH+P+ LVHKLFRL
Sbjct: 20 TRHFSITNNNNKWHTLPPFSPT--PTSLSPSASASTTALKWVLRCCPHLPKPLVHKLFRL 77
Query: 245 RQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTAKEINFIRG 424
RQVR + K+V AKDTLNSGD IFLP SVK P K +T +I F+R
Sbjct: 78 RQVRRSSSPTI----IKRVAAKDTLNSGDTIFLPLSVKHIPTEVKRHSDLTPHQIQFVRS 133
Query: 425 LVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGIL 604
LV+YKDPA LVLNKPPGMPVQGGINIKRSLDV+A ACL +EY + PRLVHRLDRDCSGIL
Sbjct: 134 LVLYKDPAVLVLNKPPGMPVQGGINIKRSLDVLAAACLNFEYPDSPRLVHRLDRDCSGIL 193
Query: 605 VMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
VMGRTQTSA +LHSIFREKTS ASDDI E RILQRRY ALVIG PRR +G ITA LG
Sbjct: 194 VMGRTQTSATILHSIFREKTSTASDDI-DAENRILQRRYIALVIGCPRRPRGLITASLG 251
Score = 271 bits (693), Expect(2) = e-152
Identities = 135/174 (77%), Positives = 153/174 (87%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRIT++D+STLLSSQHAITEY V+GSSS+GYTWLEL PLTGRKHQLRVH
Sbjct: 250 LGKVVVDNGKSDRITVVDNSTLLSSQHAITEYHVIGSSSHGYTWLELYPLTGRKHQLRVH 309
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+K+GH +LS++ DSSEEL KEE LPFGL + KGSISE+ P
Sbjct: 310 CAEVLGTPIVGDYKYGWQAHRKFGHDNLSDV-DSSEELCKEEMLPFGLTMNKGSISERCP 368
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
RLHLHCKQIVLPNI +AL++VQS +YDL+ V L L LPPYMQRSWD+TNS
Sbjct: 369 RLHLHCKQIVLPNIYRALQDVQS-PHYDLNQVGNLALTAPLPPYMQRSWDITNS 421
>ref|XP_014633041.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X4
[Glycine max]
Length = 397
Score = 301 bits (771), Expect(3) = e-151
Identities = 143/173 (82%), Positives = 157/173 (90%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNG+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVH
Sbjct: 224 LGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVH 283
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE P
Sbjct: 284 CAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHP 343
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQ+VLPNISQAL+NVQS S+ DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 344 RLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 396
Score = 238 bits (607), Expect(3) = e-151
Identities = 125/165 (75%), Positives = 136/165 (82%), Gaps = 2/165 (1%)
Frame = +2
Query: 293 KKVGAKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAKEINFIRGLVIYKDPATLVLNK 466
+K AKDTLN+GDRI LP SVK +TP + H+T ++INFIR LVIYKDPA LVLNK
Sbjct: 66 QKGKAKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVIYKDPAILVLNK 121
Query: 467 PPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHS 646
PPGMPVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMGRT TS VLHS
Sbjct: 122 PPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTSTTVLHS 181
Query: 647 IFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
IFREKTS+ASDDIG EKRILQRRYWALV+G PRR KG +TA LG
Sbjct: 182 IFREKTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLG 225
Score = 48.1 bits (113), Expect(3) = e-151
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +1
Query: 118 CECHCEDVRKPSLVIGFDECAEMGNSVLPPHTQNPCAQAVSSKTGSDAPCCGARPS*IQK 297
CEC E S ++ D +MG SVLPP +Q+ AQA SKTGS++PC + IQK
Sbjct: 13 CECGAE-----STLVHSDHRTQMGCSVLPPPSQSSGAQAFPSKTGSNSPCHCYTTTNIQK 67
Query: 298 G 300
G
Sbjct: 68 G 68
>ref|XP_016197034.1| RNA pseudouridine synthase 4, mitochondrial [Arachis ipaensis]
Length = 423
Score = 296 bits (759), Expect(2) = e-150
Identities = 155/234 (66%), Positives = 175/234 (74%)
Frame = +2
Query: 80 LSADDGKWLRLPPVSATVKTSENQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRM 259
L ++ KW LPP S T +S+S ST+ALKWV+RCCPH+P+ LVHKLFRLRQVR
Sbjct: 29 LPDNNNKWHTLPPFSPT----PTSLSASASTTALKWVLRCCPHLPKPLVHKLFRLRQVRR 84
Query: 260 LPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTAKEINFIRGLVIYK 439
+ K+V AKDTLNSGD IFLP SVK P K +T ++I F+R LV+YK
Sbjct: 85 SSSPTI----IKRVAAKDTLNSGDTIFLPLSVKHIPTEKKRHSDLTPQQIQFVRSLVLYK 140
Query: 440 DPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRT 619
DPA LVLNKPPGMPVQGG NIKRSLDV+A ACL +EY + PRLVHRLDRDCSGILVMGRT
Sbjct: 141 DPAVLVLNKPPGMPVQGGTNIKRSLDVLAAACLNFEYPDSPRLVHRLDRDCSGILVMGRT 200
Query: 620 QTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
QTSA +LHSIFREKTS ASDDI E RILQRRY ALVIG PRR +G ITA LG
Sbjct: 201 QTSATILHSIFREKTSTASDDI-DAENRILQRRYIALVIGCPRRPRGLITASLG 253
Score = 268 bits (684), Expect(2) = e-150
Identities = 135/174 (77%), Positives = 152/174 (87%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRITI+D+STLLSSQHAITEY V+GSSS+GYTWLEL PLTGRKHQLRVH
Sbjct: 252 LGKVVVDNGKSDRITIVDNSTLLSSQHAITEYHVIGSSSHGYTWLELYPLTGRKHQLRVH 311
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+K+G +LS++ DSSEEL KEE LPFGL + KGSISE+ P
Sbjct: 312 CAEVLGTPIVGDYKYGWQAHRKFGPDNLSDV-DSSEELCKEEMLPFGLTMNKGSISERCP 370
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
RLHLHCKQIVLPNI +AL++VQS +YDL+ V L L LPPYMQRSWD+TNS
Sbjct: 371 RLHLHCKQIVLPNIYRALQDVQS-PHYDLNQVGNLALTAPLPPYMQRSWDITNS 423
>ref|XP_014633042.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X5
[Glycine max]
Length = 395
Score = 301 bits (771), Expect(3) = e-150
Identities = 143/173 (82%), Positives = 157/173 (90%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNG+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVH
Sbjct: 222 LGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVH 281
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE P
Sbjct: 282 CAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHP 341
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQ+VLPNISQAL+NVQS S+ DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 342 RLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 394
Score = 238 bits (606), Expect(3) = e-150
Identities = 124/161 (77%), Positives = 134/161 (83%), Gaps = 2/161 (1%)
Frame = +2
Query: 305 AKDTLNSGDRIFLPDSVK--ETPAAAKHECHVTAKEINFIRGLVIYKDPATLVLNKPPGM 478
AKDTLN+GDRI LP SVK +TP + H+T ++INFIR LVIYKDPA LVLNKPPGM
Sbjct: 68 AKDTLNTGDRILLPQSVKVKQTPTHS----HLTPQQINFIRTLVIYKDPAILVLNKPPGM 123
Query: 479 PVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSAAVLHSIFRE 658
PVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMGRT TS VLHSIFRE
Sbjct: 124 PVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTSTTVLHSIFRE 183
Query: 659 KTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
KTS+ASDDIG EKRILQRRYWALV+G PRR KG +TA LG
Sbjct: 184 KTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLG 223
Score = 45.8 bits (107), Expect(3) = e-150
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +1
Query: 118 CECHCEDVRKPSLVIGFDECAEMGNSVLPPHTQNPCAQAVSSKTGSDAPCCGARPS*IQK 297
CEC E S ++ D +MG SVLPP +Q+ AQA SKTGS++PC + IQK
Sbjct: 13 CECGAE-----STLVHSDHRTQMGCSVLPPPSQSSGAQAFPSKTGSNSPCHCYTTTNIQK 67
>gb|KRH77958.1| hypothetical protein GLYMA_01G244300 [Glycine max]
Length = 382
Score = 301 bits (771), Expect(2) = e-147
Identities = 143/173 (82%), Positives = 157/173 (90%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNG+SDRITI+D+STL+SSQHAITEYRV+ SSS GYTWLEL+PLTGRKHQLRVH
Sbjct: 209 LGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVH 268
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQAH+KWGHFDL N+EDS EEL+ EE LPFGLNL KGSISE P
Sbjct: 269 CAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHP 328
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTN 1289
RLHLHCKQ+VLPNISQAL+NVQS S+ DLS+VE L+L DLPPYMQRSWDVTN
Sbjct: 329 RLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDVTN 381
Score = 251 bits (640), Expect(2) = e-147
Identities = 139/232 (59%), Positives = 152/232 (65%), Gaps = 2/232 (0%)
Frame = +2
Query: 92 DGKWLRLPPVSATVKTSE--NQVSSSGSTSALKWVIRCCPHIPRTLVHKLFRLRQVRMLP 265
+ KWL LPPVSA+ S NQ+SS+ T+ALKWV+RCCPH+PR LVHKLFRLRQVR+ P
Sbjct: 28 EDKWLTLPPVSASSSASVELNQLSST-PTTALKWVVRCCPHLPRALVHKLFRLRQVRIHP 86
Query: 266 AAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECHVTAKEINFIRGLVIYKDP 445
A V FK+ DP
Sbjct: 87 ATVIQQQTFKR-----------------------------------------------DP 99
Query: 446 ATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSGILVMGRTQT 625
A LVLNKPPGMPVQGGINIKRSLD VA A L Y YS+PPRLVHRLDRDCSGILVMGRT T
Sbjct: 100 AILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHT 159
Query: 626 SAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPLG 781
S VLHSIFREKTS+ASDDIG EKRILQRRYWALV+G PRR KG +TA LG
Sbjct: 160 STTVLHSIFREKTSRASDDIGK-EKRILQRRYWALVLGCPRRPKGLVTASLG 210
>dbj|GAU29527.1| hypothetical protein TSUD_115490 [Trifolium subterraneum]
Length = 354
Score = 298 bits (764), Expect(2) = e-147
Identities = 146/176 (82%), Positives = 161/176 (91%), Gaps = 2/176 (1%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRITI+D+ T LSSQHAITEYRV+GSSS+GYTWLELSPLTGRKHQLRVH
Sbjct: 179 LGKVVVDNGKSDRITIVDNPTSLSSQHAITEYRVIGSSSHGYTWLELSPLTGRKHQLRVH 238
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYG QAHKKWG FDLSNLED++EEL+KEE LPFGLNL KG IS+K P
Sbjct: 239 CAEVLGTPIVGDYKYGRQAHKKWGQFDLSNLEDTTEELLKEEALPFGLNLNKGCISDKHP 298
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSN--YDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
RLHLHCKQIVLPNISQAL+NVQS+S+ YDLS VE L+L+ DLPPYM++SWDVTNS
Sbjct: 299 RLHLHCKQIVLPNISQALQNVQSLSDSTYDLSEVEALELEADLPPYMKKSWDVTNS 354
Score = 253 bits (646), Expect(2) = e-147
Identities = 131/181 (72%), Positives = 148/181 (81%), Gaps = 1/181 (0%)
Frame = +2
Query: 242 LRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKE-TPAAAKHECHVTAKEINFI 418
L + + P+ QDH +FK+V KD+LNSGDRIFLP SVK+ TP +TAK+INFI
Sbjct: 2 LPSLSLSPSQQQDH-KFKRVTPKDSLNSGDRIFLPHSVKQITPPKHDSPLTLTAKQINFI 60
Query: 419 RGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLVHRLDRDCSG 598
R LVIYKDP LVLNKPPGMPVQGGINIKRSLD VA CL Y+YSEPPRLVHRLDRDCSG
Sbjct: 61 RTLVIYKDPHILVLNKPPGMPVQGGINIKRSLDAVAAECLNYDYSEPPRLVHRLDRDCSG 120
Query: 599 ILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRRSKGFITAPL 778
ILVMGRT+TS +LHSIFR+KTS ASDDIG T++RILQRRYWALV+G PRRS G +TAPL
Sbjct: 121 ILVMGRTKTSTTLLHSIFRDKTSTASDDIG-TKRRILQRRYWALVLGCPRRSGGLVTAPL 179
Query: 779 G 781
G
Sbjct: 180 G 180
>ref|XP_013453292.1| RNA pseudouridine synthase [Medicago truncatula]
gb|KEH27320.1| RNA pseudouridine synthase [Medicago truncatula]
Length = 390
Score = 296 bits (758), Expect(2) = e-146
Identities = 144/176 (81%), Positives = 161/176 (91%), Gaps = 2/176 (1%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VVVDNGKSDRITI+D+S LLSSQHA+TEYRV+ SSS+G+TWLELSPLTGRKHQLRVH
Sbjct: 215 LGKVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSPLTGRKHQLRVH 274
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYG QAHKKWG FD SNLEDS+EE +KEE LPFGLNL KGSIS+K P
Sbjct: 275 CAEVLGTPIVGDYKYGRQAHKKWGQFDFSNLEDSTEEHLKEEALPFGLNLNKGSISDKHP 334
Query: 1131 RLHLHCKQIVLPNISQALKNVQSV--SNYDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
RLHLHCKQIVLPNISQAL+NVQSV S+YDLS VE+L+L+ DLPPYM++SW+VTNS
Sbjct: 335 RLHLHCKQIVLPNISQALQNVQSVSDSSYDLSAVESLELEADLPPYMKKSWEVTNS 390
Score = 253 bits (645), Expect(2) = e-146
Identities = 134/190 (70%), Positives = 150/190 (78%), Gaps = 6/190 (3%)
Frame = +2
Query: 230 KLFRLRQVRMLPAAVQDHHRFKKVGAKDTLNSGDRIFLPDSVKE----TPAAAKHECHVT 397
K L VRMLP QD ++FK+V KDTLNSGDRIFLP+SVK+ TP KHE +T
Sbjct: 28 KWLTLPPVRMLPRQ-QDDNKFKRVTPKDTLNSGDRIFLPNSVKQQIPLTPTPPKHESPLT 86
Query: 398 --AKEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLV 571
AK+INFIR LVIYKDP LVLNKPPGMPVQGGINIK SLD VA L Y+YS+PPRLV
Sbjct: 87 LTAKQINFIRSLVIYKDPHILVLNKPPGMPVQGGINIKLSLDAVAAQSLNYDYSQPPRLV 146
Query: 572 HRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRR 751
HRLDRDCSGILVMGRT+TS A+LHSIFREKTS+AS++ TEK ILQRRYWALV+G PRR
Sbjct: 147 HRLDRDCSGILVMGRTKTSTALLHSIFREKTSRASNEENDTEKIILQRRYWALVLGCPRR 206
Query: 752 SKGFITAPLG 781
S G + APLG
Sbjct: 207 SGGVVNAPLG 216
>dbj|GAV62308.1| PseudoU_synth_2 domain-containing protein [Cephalotus follicularis]
Length = 467
Score = 277 bits (709), Expect(2) = e-144
Identities = 144/250 (57%), Positives = 174/250 (69%), Gaps = 21/250 (8%)
Frame = +2
Query: 95 GKWLRLPPVSATVKTS-------------ENQVSSSGSTSALKWVIRCCPHIPRTLVHKL 235
GKW +PP + + S +++ T+A+KWV++CCP +PR+LV KL
Sbjct: 47 GKWFPVPPFTHAINGSALGSELARGGGGASASKAAASETTAIKWVLKCCPELPRSLVQKL 106
Query: 236 FRLRQVRMLPA--------AVQDHHRFKKVGAKDTLNSGDRIFLPDSVKETPAAAKHECH 391
FRLRQVR A A + K+V AKD LN GD+IFLP SV+E P+ K ECH
Sbjct: 107 FRLRQVRRGSADGGSSDLGAQGQAPQLKRVAAKDLLNLGDQIFLPISVQELPSE-KQECH 165
Query: 392 VTAKEINFIRGLVIYKDPATLVLNKPPGMPVQGGINIKRSLDVVAGACLKYEYSEPPRLV 571
+E+NF+R L +YKDPA +V+NKP GMPVQGG+ IKRSLD +A CL Y+YSEPPRLV
Sbjct: 166 CCEEEVNFVRSLELYKDPAIIVVNKPSGMPVQGGVGIKRSLDELAATCLSYDYSEPPRLV 225
Query: 572 HRLDRDCSGILVMGRTQTSAAVLHSIFREKTSKASDDIGSTEKRILQRRYWALVIGSPRR 751
HRLDRDCSGILVMGRTQ SA VLHSIFREKT AS + +KRILQRRYWALVIGSPRR
Sbjct: 226 HRLDRDCSGILVMGRTQLSATVLHSIFREKTVDASKCEINNKKRILQRRYWALVIGSPRR 285
Query: 752 SKGFITAPLG 781
+KG + APLG
Sbjct: 286 TKGLVAAPLG 295
Score = 266 bits (679), Expect(2) = e-144
Identities = 119/174 (68%), Positives = 152/174 (87%)
Frame = +3
Query: 771 LHSVVVDNGKSDRITILDHSTLLSSQHAITEYRVLGSSSNGYTWLELSPLTGRKHQLRVH 950
L VV+DNGKSDRIT++D + ++SSQHA+TEYRV+ SSS+GYTWLELSPLTGRKHQLRVH
Sbjct: 294 LGKVVLDNGKSDRITVVDCAQMMSSQHAVTEYRVIQSSSHGYTWLELSPLTGRKHQLRVH 353
Query: 951 CAEVLGTPIVGDYKYGWQAHKKWGHFDLSNLEDSSEELVKEETLPFGLNLTKGSISEKQP 1130
CAEVLGTPIVGDYKYGWQ H+KW F S+L++S+E+L KE+TLPFG+++ +GS+SEK P
Sbjct: 354 CAEVLGTPIVGDYKYGWQVHRKWKQFPFSDLKNSNEDLCKEKTLPFGIDMERGSVSEKHP 413
Query: 1131 RLHLHCKQIVLPNISQALKNVQSVSNYDLSVVETLDLKVDLPPYMQRSWDVTNS 1292
RLHLHCKQI+LPN+SQAL+N+ + S+YDLS + +++L +PPYMQRSWD+ S
Sbjct: 414 RLHLHCKQIILPNVSQALQNLLASSDYDLSELPSIELVAPMPPYMQRSWDILKS 467