BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00008803
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca...   180   1e-52
ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD,...   171   7e-49
gb|PNX74113.1| RNA polymerase sigma factor, partial [Trifolium p...   167   4e-48
dbj|GAU38917.1| hypothetical protein TSUD_119830 [Trifolium subt...   150   3e-41
gb|OIW16887.1| hypothetical protein TanjilG_01752 [Lupinus angus...   150   4e-41
ref|XP_019427571.1| PREDICTED: RNA polymerase sigma factor sigD,...   150   6e-41
ref|XP_018855360.1| PREDICTED: RNA polymerase sigma factor sigD,...   141   8e-39
ref|XP_018817147.1| PREDICTED: RNA polymerase sigma factor sigD,...   141   4e-38
ref|XP_018817139.1| PREDICTED: RNA polymerase sigma factor sigD,...   141   2e-37
ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD,...   139   2e-36
gb|AKC88708.1| sigma factor [Geranium maderense]                      136   2e-35
ref|XP_021890812.1| RNA polymerase sigma factor sigD, chloroplas...   135   2e-35
ref|XP_021890811.1| RNA polymerase sigma factor sigD, chloroplas...   135   7e-35
emb|CBI24961.3| unnamed protein product, partial [Vitis vinifera]     131   2e-34
ref|XP_022152696.1| RNA polymerase sigma factor sigD, chloroplas...   134   2e-34
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,...   133   3e-34
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu...   129   3e-34
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu...   129   4e-34
ref|XP_019079852.1| PREDICTED: RNA polymerase sigma factor sigD,...   131   4e-34
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,...   132   6e-34

>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
 gb|AES69690.1| RNA polymerase sigma factor [Medicago truncatula]
          Length = 403

 Score =  180 bits (457), Expect = 1e-52
 Identities = 99/162 (61%), Positives = 115/162 (70%), Gaps = 26/162 (16%)
 Frame = -1

Query: 408 NLGCL-EEENHQNNF----------------STEKAKLCLCLKEGARIEVAKQRITELEG 280
           NLGC+ EEEN QNNF                ST++A+LCLCLKEGA+IEVAKQR+TE EG
Sbjct: 83  NLGCMVEEENIQNNFLRQKVVVGSVTSGFLSSTDEAELCLCLKEGAKIEVAKQRMTEQEG 142

Query: 279 SSS---------AISRVLCKTKESRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIG 127
           +S+         ++ +VL  T++S+ERL RDYR LVASIA+ YQGKGLS +DLIQEG IG
Sbjct: 143 NSAISRFTLENTSVDKVLINTRKSKERLARDYRGLVASIAAHYQGKGLSIQDLIQEGTIG 202

Query: 126 LLHGAEKFDPNRGCKLSTYVYWWXXXXXXXXXXXKSRLIRLP 1
           LLHGAEKFDPNRGCKLSTYVYWW           KSRLIRLP
Sbjct: 203 LLHGAEKFDPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLP 244


>ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cicer
           arietinum]
          Length = 407

 Score =  171 bits (432), Expect = 7e-49
 Identities = 95/158 (60%), Positives = 110/158 (69%), Gaps = 22/158 (13%)
 Frame = -1

Query: 408 NLGCL-EEENHQNNFSTEK-----------AKLCLCLKEGARIEVAKQRITELEGSSS-- 271
           NLGC+ EEEN QNNFS EK           A++CL LKEGARIEV+K R+TE EG+SS  
Sbjct: 91  NLGCVVEEENIQNNFSREKELVGFLSSIEEAEICLGLKEGARIEVSKHRMTEHEGNSSIS 150

Query: 270 --------AISRVLCKTKESRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHG 115
                   ++ +VL  T+ES+ERL  +YR LVASIA+ YQGKGLS +DL QEG IGLLHG
Sbjct: 151 RRLAHGNTSLDKVLSNTRESKERLAHEYRGLVASIAARYQGKGLSFQDLTQEGTIGLLHG 210

Query: 114 AEKFDPNRGCKLSTYVYWWXXXXXXXXXXXKSRLIRLP 1
           AEKFDPNRGCKLSTYVYWW           KSRL+RLP
Sbjct: 211 AEKFDPNRGCKLSTYVYWWIKQAILKALARKSRLVRLP 248


>gb|PNX74113.1| RNA polymerase sigma factor, partial [Trifolium pratense]
          Length = 360

 Score =  167 bits (424), Expect = 4e-48
 Identities = 96/163 (58%), Positives = 108/163 (66%), Gaps = 27/163 (16%)
 Frame = -1

Query: 408 NLG-CLEEENHQNNF----------------STEKAKLCLCLKEGARIEVAKQRITELEG 280
           NLG  +EEE+ QNNF                S E+A+LCLCLKEGARIE AKQR+TE EG
Sbjct: 93  NLGYVMEEESIQNNFLWQKHVVGSVTSGFLSSIEEAELCLCLKEGARIEAAKQRMTEHEG 152

Query: 279 SSS----------AISRVLCKTKESRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNI 130
           +S+          +I  V+  T+ES+ERL R+YR LVASIA  YQG GL  EDLIQEG I
Sbjct: 153 NSAISRRFALGNTSIEEVMITTRESKERLAREYRGLVASIAGRYQGNGLHIEDLIQEGTI 212

Query: 129 GLLHGAEKFDPNRGCKLSTYVYWWXXXXXXXXXXXKSRLIRLP 1
           GLLHGAEKFDPNRGCKLSTYVYWW           KSRLIRLP
Sbjct: 213 GLLHGAEKFDPNRGCKLSTYVYWWIKQAIIKALAKKSRLIRLP 255


>dbj|GAU38917.1| hypothetical protein TSUD_119830 [Trifolium subterraneum]
          Length = 390

 Score =  150 bits (380), Expect = 3e-41
 Identities = 84/140 (60%), Positives = 98/140 (70%), Gaps = 27/140 (19%)
 Frame = -1

Query: 408 NLGC-LEEENHQNNF----------------STEKAKLCLCLKEGARIEVAKQRITELEG 280
           NLGC +E+E+ QN+F                S E+A+LCLCLKEGARIE AKQR+TE EG
Sbjct: 92  NLGCVMEDESIQNSFLWQKHVGGSVTPGFLSSIEEAELCLCLKEGARIEAAKQRMTEHEG 151

Query: 279 SSSA----------ISRVLCKTKESRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNI 130
           +S            + +VL  T+ES+ERL R+YR LVASIA+ YQGKGL  EDLIQEG I
Sbjct: 152 NSEISRRFALDNTNVDKVLINTRESKERLAREYRGLVASIAARYQGKGLQIEDLIQEGTI 211

Query: 129 GLLHGAEKFDPNRGCKLSTY 70
           GLLHGAEKFDPNRGCKLSTY
Sbjct: 212 GLLHGAEKFDPNRGCKLSTY 231


>gb|OIW16887.1| hypothetical protein TanjilG_01752 [Lupinus angustifolius]
          Length = 414

 Score =  150 bits (380), Expect = 4e-41
 Identities = 81/133 (60%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
 Frame = -1

Query: 366 STEKAKLCLCLKEGARIEVAKQRITE-----------LEGSSSAISRVLCKTKESRERLV 220
           S E+A+LCLCLKEGA+IE+AK RI E           L   ++ + +VLC T+ESRER+ 
Sbjct: 123 SREEAELCLCLKEGAKIELAKLRINESKEHPAIPMRRLVLGNAILDKVLCNTRESRERIA 182

Query: 219 RDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXXXX 40
           R+YR LVASIAS YQGKGLS +DL+QEG IGLL GAEKFDP+RG KLSTYVYWW      
Sbjct: 183 REYRGLVASIASSYQGKGLSFQDLMQEGTIGLLKGAEKFDPDRGNKLSTYVYWWIKQAII 242

Query: 39  XXXXXKSRLIRLP 1
                KSRLIRLP
Sbjct: 243 KAVAKKSRLIRLP 255


>ref|XP_019427571.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Lupinus
           angustifolius]
          Length = 433

 Score =  150 bits (380), Expect = 6e-41
 Identities = 81/133 (60%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
 Frame = -1

Query: 366 STEKAKLCLCLKEGARIEVAKQRITE-----------LEGSSSAISRVLCKTKESRERLV 220
           S E+A+LCLCLKEGA+IE+AK RI E           L   ++ + +VLC T+ESRER+ 
Sbjct: 142 SREEAELCLCLKEGAKIELAKLRINESKEHPAIPMRRLVLGNAILDKVLCNTRESRERIA 201

Query: 219 RDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXXXX 40
           R+YR LVASIAS YQGKGLS +DL+QEG IGLL GAEKFDP+RG KLSTYVYWW      
Sbjct: 202 REYRGLVASIASSYQGKGLSFQDLMQEGTIGLLKGAEKFDPDRGNKLSTYVYWWIKQAII 261

Query: 39  XXXXXKSRLIRLP 1
                KSRLIRLP
Sbjct: 262 KAVAKKSRLIRLP 274


>ref|XP_018855360.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Juglans regia]
          Length = 277

 Score =  141 bits (356), Expect = 8e-39
 Identities = 72/139 (51%), Positives = 92/139 (66%), Gaps = 13/139 (9%)
 Frame = -1

Query: 378 QNNFSTEKAKLCLCLKEGARIEVAKQRITELEGSSS-------------AISRVLCKTKE 238
           +N  S E+A+LCLC+KEGAR+EVA  RIT+ +G                ++ ++LC  ++
Sbjct: 129 RNLSSREEAELCLCVKEGARLEVASTRITKAQGRQPTSKQLAKAIGMERSVDKILCDGRD 188

Query: 237 SRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWW 58
           SRER+ R YR LV SIA GYQGKGLS  DLIQEG+IGLL G EKF+P RG +LSTYVYWW
Sbjct: 189 SRERISRSYRRLVVSIAKGYQGKGLSFRDLIQEGSIGLLRGVEKFEPERGYRLSTYVYWW 248

Query: 57  XXXXXXXXXXXKSRLIRLP 1
                      +SR++RLP
Sbjct: 249 IKQAIIKAIANESRIVRLP 267


>ref|XP_018817147.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X2 [Juglans regia]
          Length = 350

 Score =  141 bits (356), Expect = 4e-38
 Identities = 72/139 (51%), Positives = 92/139 (66%), Gaps = 13/139 (9%)
 Frame = -1

Query: 378 QNNFSTEKAKLCLCLKEGARIEVAKQRITELEGSSS-------------AISRVLCKTKE 238
           +N  S E+A+LCLC+KEGAR+EVA  RIT+ +G                ++ ++LC  ++
Sbjct: 129 RNLSSREEAELCLCVKEGARLEVASTRITKAQGRQPTSKQLAKAIGMERSVDKILCDGRD 188

Query: 237 SRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWW 58
           SRER+ R YR LV SIA GYQGKGLS  DLIQEG+IGLL G EKF+P RG +LSTYVYWW
Sbjct: 189 SRERISRSYRRLVVSIAKGYQGKGLSFRDLIQEGSIGLLRGVEKFEPERGYRLSTYVYWW 248

Query: 57  XXXXXXXXXXXKSRLIRLP 1
                      +SR++RLP
Sbjct: 249 IKQAIIKAIANESRIVRLP 267


>ref|XP_018817139.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Juglans regia]
          Length = 426

 Score =  141 bits (356), Expect = 2e-37
 Identities = 72/139 (51%), Positives = 92/139 (66%), Gaps = 13/139 (9%)
 Frame = -1

Query: 378 QNNFSTEKAKLCLCLKEGARIEVAKQRITELEGSSS-------------AISRVLCKTKE 238
           +N  S E+A+LCLC+KEGAR+EVA  RIT+ +G                ++ ++LC  ++
Sbjct: 129 RNLSSREEAELCLCVKEGARLEVASTRITKAQGRQPTSKQLAKAIGMERSVDKILCDGRD 188

Query: 237 SRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWW 58
           SRER+ R YR LV SIA GYQGKGLS  DLIQEG+IGLL G EKF+P RG +LSTYVYWW
Sbjct: 189 SRERISRSYRRLVVSIAKGYQGKGLSFRDLIQEGSIGLLRGVEKFEPERGYRLSTYVYWW 248

Query: 57  XXXXXXXXXXXKSRLIRLP 1
                      +SR++RLP
Sbjct: 249 IKQAIIKAIANESRIVRLP 267


>ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Pyrus x
           bretschneideri]
          Length = 436

 Score =  139 bits (349), Expect = 2e-36
 Identities = 73/136 (53%), Positives = 90/136 (66%), Gaps = 14/136 (10%)
 Frame = -1

Query: 366 STEKAKLCLCLKEGARIEVAKQRITELEGS--------------SSAISRVLCKTKESRE 229
           S E+A+ CL LKEGAR+E  + R+ E E                + +I +VLCK +ES+E
Sbjct: 142 SKEEAECCLSLKEGARLESRRLRVVEDEEQEPTSKQLAKAMGMKTRSIDKVLCKKRESQE 201

Query: 228 RLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXX 49
           R++R YR L+ S+AS YQGKGLS +DLIQEG+IGLL GAEKFD  RGCKLSTYVYWW   
Sbjct: 202 RIIRSYRGLIVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERGCKLSTYVYWWIRQ 261

Query: 48  XXXXXXXXKSRLIRLP 1
                   KSR+IRLP
Sbjct: 262 AIIRALDKKSRIIRLP 277


>gb|AKC88708.1| sigma factor [Geranium maderense]
          Length = 418

 Score =  136 bits (342), Expect = 2e-35
 Identities = 66/117 (56%), Positives = 87/117 (74%), Gaps = 14/117 (11%)
 Frame = -1

Query: 366 STEKAKLCLCLKEGARIEVAKQRITE-LEGSSS-------------AISRVLCKTKESRE 229
           S ++A+LC+CLKEGAR+E  ++RI E LE   S             +I  ++C T+ES++
Sbjct: 123 SKQEAQLCMCLKEGARVEAERRRIAEALEHEPSLEQLAMAMGMKRRSIHNIVCNTRESQK 182

Query: 228 RLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWW 58
           RL+R Y+ L+ SIA+ YQGKGLS +DL+Q+G+IGLL GAEKFDPNRGCKLSTYVYWW
Sbjct: 183 RLIRSYQGLIFSIANNYQGKGLSLQDLVQQGSIGLLRGAEKFDPNRGCKLSTYVYWW 239


>ref|XP_021890812.1| RNA polymerase sigma factor sigD, chloroplastic isoform X2 [Carica
           papaya]
          Length = 376

 Score =  135 bits (339), Expect = 2e-35
 Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 13/135 (9%)
 Frame = -1

Query: 366 STEKAKLCLCLKEGARIEVAKQRITELE-------------GSSSAISRVLCKTKESRER 226
           S E+A+LC+C+K+GAR+E A++ + + +                 ++ +VL +T+E+RER
Sbjct: 150 SREEAELCMCIKDGARVEAARRLLEDAQEHQQTTKWLANGINIKGSVDKVLWRTREARER 209

Query: 225 LVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXX 46
           + R YR LV SIA+GYQGKGLS +DLIQEG+IGLL GAEKFD  RG KLSTYVYWW    
Sbjct: 210 ITRSYRGLVVSIATGYQGKGLSLQDLIQEGSIGLLRGAEKFDVERGYKLSTYVYWWIKQA 269

Query: 45  XXXXXXXKSRLIRLP 1
                   SR++RLP
Sbjct: 270 IIKALTNNSRMVRLP 284


>ref|XP_021890811.1| RNA polymerase sigma factor sigD, chloroplastic isoform X1 [Carica
           papaya]
          Length = 443

 Score =  135 bits (339), Expect = 7e-35
 Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 13/135 (9%)
 Frame = -1

Query: 366 STEKAKLCLCLKEGARIEVAKQRITELE-------------GSSSAISRVLCKTKESRER 226
           S E+A+LC+C+K+GAR+E A++ + + +                 ++ +VL +T+E+RER
Sbjct: 150 SREEAELCMCIKDGARVEAARRLLEDAQEHQQTTKWLANGINIKGSVDKVLWRTREARER 209

Query: 225 LVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXX 46
           + R YR LV SIA+GYQGKGLS +DLIQEG+IGLL GAEKFD  RG KLSTYVYWW    
Sbjct: 210 ITRSYRGLVVSIATGYQGKGLSLQDLIQEGSIGLLRGAEKFDVERGYKLSTYVYWWIKQA 269

Query: 45  XXXXXXXKSRLIRLP 1
                   SR++RLP
Sbjct: 270 IIKALTNNSRMVRLP 284


>emb|CBI24961.3| unnamed protein product, partial [Vitis vinifera]
          Length = 319

 Score =  131 bits (330), Expect = 2e-34
 Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 23/153 (15%)
 Frame = -1

Query: 390 EENHQNNFST---------EKAKLCLCLKEGARIEVAKQRITELEGSS------------ 274
           EE H+ +F           E+A+ CLCLKE A +E A++RI E                 
Sbjct: 8   EEVHEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGI 67

Query: 273 --SAISRVLCKTKESRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFD 100
             S++ ++LC  +ESRER+ + YR LV SIA+ YQGKGLS +DLIQEG+IGLL GAE+FD
Sbjct: 68  KRSSLDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFD 127

Query: 99  PNRGCKLSTYVYWWXXXXXXXXXXXKSRLIRLP 1
           P+RG KLSTYVYWW           KSR+IRLP
Sbjct: 128 PDRGYKLSTYVYWWIRQAIVRAIANKSRIIRLP 160


>ref|XP_022152696.1| RNA polymerase sigma factor sigD, chloroplastic [Momordica
           charantia]
          Length = 436

 Score =  134 bits (336), Expect = 2e-34
 Identities = 72/134 (53%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
 Frame = -1

Query: 360 EKAKLCLCLKEGARIEVAKQRITELEGSSSA--------------ISRVLCKTKESRERL 223
           E+A+LCLCLKE A++E AK RI E +                   I R+LC+ KESR+RL
Sbjct: 144 EEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIATGTNLRCIDRILCRAKESRDRL 203

Query: 222 VRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXXX 43
           ++ Y  LV SIA+ YQGKGLS +DL QEGNIGLL GAE+F+PNRG KLSTY YWW     
Sbjct: 204 IQCYSKLVVSIAAPYQGKGLSLQDLTQEGNIGLLIGAERFEPNRGHKLSTYAYWWIRQAI 263

Query: 42  XXXXXXKSRLIRLP 1
                 KSRL+RLP
Sbjct: 264 IRALDNKSRLVRLP 277


>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Fragaria vesca subsp. vesca]
          Length = 452

 Score =  133 bits (335), Expect = 3e-34
 Identities = 69/134 (51%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
 Frame = -1

Query: 360 EKAKLCLCLKEGARIEVAKQRITELEGSS--------------SAISRVLCKTKESRERL 223
           E+A  C+ LKEGA++E  + R TE +                 S+I +V+C  +ES+ER+
Sbjct: 160 EEADCCMSLKEGAKLESERTRFTEAQEHEPTSKQLANAMRIKMSSIDKVICNRRESQERI 219

Query: 222 VRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXXX 43
           ++ YR LV S+AS YQGKGLS +DLIQEG+IGLL GAEKFDP RG KLSTYVYWW     
Sbjct: 220 IKSYRGLVVSVASSYQGKGLSLQDLIQEGSIGLLRGAEKFDPERGLKLSTYVYWWIRQAI 279

Query: 42  XXXXXXKSRLIRLP 1
                 KSR+IRLP
Sbjct: 280 IRAIENKSRIIRLP 293


>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
          Length = 276

 Score =  129 bits (325), Expect = 3e-34
 Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
 Frame = -1

Query: 360 EKAKLCLCLKEGARIEVAKQRITELEG--------------SSSAISRVLCKTKESRERL 223
           E+A+  +CLK  ARIE A++RI E++                 +++  VLCK +ESRE++
Sbjct: 130 EEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKI 189

Query: 222 VRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXXX 43
           +R YR LV SIA+ YQ KGLS +DLIQEG+IGLL GAE+FDP RG KLSTYVYWW     
Sbjct: 190 IRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAI 249

Query: 42  XXXXXXKSRLIRLP 1
                  +R++RLP
Sbjct: 250 LTAISNNTRMVRLP 263


>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
          Length = 284

 Score =  129 bits (325), Expect = 4e-34
 Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
 Frame = -1

Query: 360 EKAKLCLCLKEGARIEVAKQRITELEG--------------SSSAISRVLCKTKESRERL 223
           E+A+  +CLK  ARIE A++RI E++                 +++  VLCK +ESRE++
Sbjct: 130 EEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKI 189

Query: 222 VRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXXX 43
           +R YR LV SIA+ YQ KGLS +DLIQEG+IGLL GAE+FDP RG KLSTYVYWW     
Sbjct: 190 IRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAI 249

Query: 42  XXXXXXKSRLIRLP 1
                  +R++RLP
Sbjct: 250 LTAISNNTRMVRLP 263


>ref|XP_019079852.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X2 [Vitis vinifera]
          Length = 368

 Score =  131 bits (330), Expect = 4e-34
 Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 23/153 (15%)
 Frame = -1

Query: 390 EENHQNNFST---------EKAKLCLCLKEGARIEVAKQRITELEGSS------------ 274
           EE H+ +F           E+A+ CLCLKE A +E A++RI E                 
Sbjct: 131 EEVHEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGI 190

Query: 273 --SAISRVLCKTKESRERLVRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFD 100
             S++ ++LC  +ESRER+ + YR LV SIA+ YQGKGLS +DLIQEG+IGLL GAE+FD
Sbjct: 191 KRSSLDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFD 250

Query: 99  PNRGCKLSTYVYWWXXXXXXXXXXXKSRLIRLP 1
           P+RG KLSTYVYWW           KSR+IRLP
Sbjct: 251 PDRGYKLSTYVYWWIRQAIVRAIANKSRIIRLP 283


>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cucumis
           sativus]
 gb|KGN58573.1| hypothetical protein Csa_3G687740 [Cucumis sativus]
          Length = 436

 Score =  132 bits (332), Expect = 6e-34
 Identities = 71/134 (52%), Positives = 85/134 (63%), Gaps = 14/134 (10%)
 Frame = -1

Query: 360 EKAKLCLCLKEGARIEVAKQRITELEG--------------SSSAISRVLCKTKESRERL 223
           E+A+LCLCLKE   +E  K RI E +                S  I R+LC+ +ESR+RL
Sbjct: 144 EEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRL 203

Query: 222 VRDYRWLVASIASGYQGKGLSNEDLIQEGNIGLLHGAEKFDPNRGCKLSTYVYWWXXXXX 43
           +R Y  LV SIA+ YQGKGLS +DL QEGNIGLL GAE+F+PNRG KLSTY YWW     
Sbjct: 204 IRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAI 263

Query: 42  XXXXXXKSRLIRLP 1
                 KSRL+RLP
Sbjct: 264 IRALDKKSRLVRLP 277