BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00007106
         (545 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX81608.1| ribonuclease H [Trifolium pratense]                    216   7e-64
gb|PNX92647.1| ribonuclease H, partial [Trifolium pratense]           207   3e-63
gb|PNY15946.1| ribonuclease H, partial [Trifolium pratense]           220   4e-63
gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense]           218   2e-62
gb|PNX95881.1| ribonuclease H, partial [Trifolium pratense]           216   1e-61
dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subt...   211   1e-61
gb|PNX86072.1| ribonuclease H, partial [Trifolium pratense]           207   2e-61
gb|PNX97917.1| ribonuclease H [Trifolium pratense]                    210   7e-61
gb|PNY13536.1| ribonuclease H [Trifolium pratense]                    210   6e-60
dbj|GAU31911.1| hypothetical protein TSUD_270960 [Trifolium subt...   209   7e-60
gb|PNY14273.1| ribonuclease H, partial [Trifolium pratense]           210   8e-60
gb|PNY02920.1| ribonuclease H, partial [Trifolium pratense]           210   1e-59
gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]           210   1e-59
gb|PNX91173.1| ribonuclease H, partial [Trifolium pratense]           199   2e-59
dbj|GAU11214.1| hypothetical protein TSUD_342040 [Trifolium subt...   198   6e-58
dbj|GAU26489.1| hypothetical protein TSUD_361220 [Trifolium subt...   199   7e-58
gb|PNY06182.1| ribonuclease H [Trifolium pratense]                    201   1e-57
gb|PNX79929.1| ribonuclease H, partial [Trifolium pratense]           199   5e-57
dbj|GAU35481.1| hypothetical protein TSUD_384360 [Trifolium subt...   199   6e-57
dbj|GAU45807.1| hypothetical protein TSUD_87100 [Trifolium subte...   201   7e-57

>gb|PNX81608.1| ribonuclease H [Trifolium pratense]
          Length = 630

 Score =  216 bits (551), Expect = 7e-64
 Identities = 99/177 (55%), Positives = 130/177 (73%)
 Frame = -1

Query: 533 SGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAKAVIK 354
           SGF    SLG+YLGVPL+G+APK++DY YLI +VK+KL+ WK + LSLAGR TL+KAVI+
Sbjct: 2   SGFSEATSLGKYLGVPLVGRAPKRSDYNYLINQVKMKLSTWKAKQLSLAGRITLSKAVIE 61

Query: 353 AMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLGMRRF 174
           A+P YPMM  S+PK  + +IQ+ QR FI G+++  R YHAV WD +T+PK  GGLG+RR 
Sbjct: 62  AIPIYPMMTTSIPKACLHEIQKIQRAFIWGEENGERKYHAVSWDNITKPKAFGGLGIRRL 121

Query: 173 NSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVSL 3
             MN ACLMKL W +R+  EALW  V+ GKY R   N +  +SK  DS+LWK +V++
Sbjct: 122 VQMNKACLMKLAWSIRSGEEALWIDVIRGKYSRGNSNFNHVVSKSHDSNLWKNLVNI 178


>gb|PNX92647.1| ribonuclease H, partial [Trifolium pratense]
          Length = 350

 Score =  207 bits (528), Expect = 3e-63
 Identities = 97/181 (53%), Positives = 131/181 (72%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L   SGF+    L +YLGVPL+G+APKKADYQYLI++V  KL  WK R LS AGR TLAK
Sbjct: 80  LLHLSGFREAYDLDKYLGVPLIGRAPKKADYQYLIDQVSNKLVKWKARQLSFAGRVTLAK 139

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +V++A+PTYPMM + +P+  + +IQ+ QR FI GD +N R YHAV W +VT PK +GGLG
Sbjct: 140 SVLEAVPTYPMMTSRIPQSYLDEIQKIQRNFIWGDTENVRRYHAVRWSVVTMPKDMGGLG 199

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +RR ++MN ACL+KLGW+L N S   WC+VL GKY    +      ++ +DS+LWK++++
Sbjct: 200 LRRLDAMNKACLLKLGWKLNNGSTDFWCEVLRGKYGSNSL-TIEMNTRSSDSNLWKSLIN 258

Query: 5   L 3
           L
Sbjct: 259 L 259


>gb|PNY15946.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1195

 Score =  220 bits (560), Expect = 4e-63
 Identities = 99/181 (54%), Positives = 134/181 (74%)
 Frame = -1

Query: 545  LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
            L   SGF+V +S+G+YLGVPL+G+AP+K+DY YL+ +VK KL+ WK + LSLAGR TL+K
Sbjct: 707  LANISGFRVTQSMGKYLGVPLVGRAPRKSDYNYLLAQVKSKLSSWKAKQLSLAGRITLSK 766

Query: 365  AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
            A+I+A+P YPMM A++PK  +Q +Q+ QR FI G+ +N R YHAV WD +T PK LGGLG
Sbjct: 767  AIIEAIPIYPMMTANIPKSCLQQLQKMQRSFIWGEAENERRYHAVSWDTITLPKSLGGLG 826

Query: 185  MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
            +RR ++MN ACLMKLGW ++    ALW  VL GKY R   N    ++K  DSSLWK++ +
Sbjct: 827  IRRLHNMNKACLMKLGWSMKRGDSALWIDVLKGKYAREHPNLDSIVAKNHDSSLWKSLSA 886

Query: 5    L 3
            +
Sbjct: 887  M 887


>gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1220

 Score =  218 bits (556), Expect = 2e-62
 Identities = 101/179 (56%), Positives = 130/179 (72%)
 Frame = -1

Query: 545  LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
            L   SGF    SLG+YLGVPL+G+APK++DY YLI +VK KL+ WK +HLS AGR TL+K
Sbjct: 769  LVMMSGFIEATSLGKYLGVPLVGRAPKRSDYNYLINQVKTKLSAWKAKHLSFAGRVTLSK 828

Query: 365  AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
            AVI+A+P YPMM  ++PK  + +IQ+ QR FI GDD+  R YHAV W+ VT PK  GGLG
Sbjct: 829  AVIEAIPIYPMMTTTIPKSCLNEIQKIQRAFIWGDDNGGRKYHAVSWENVTLPKAYGGLG 888

Query: 185  MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIV 9
            MRR   MN ACLMK+GW +R+ ++ALW +V+ GKY R   N    ++K  DSSLWK++V
Sbjct: 889  MRRLVQMNKACLMKMGWAIRSGADALWIEVIKGKYDRENTNFEHVVAKAQDSSLWKSLV 947


>gb|PNX95881.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1157

 Score =  216 bits (549), Expect = 1e-61
 Identities = 102/178 (57%), Positives = 129/178 (72%)
 Frame = -1

Query: 545  LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
            L   +GFK   + G+YLGVPL G+APK+ D+QYL+++V  KL+ WK  HLS AGR TLAK
Sbjct: 711  LLNITGFKETSNFGKYLGVPLHGRAPKRMDFQYLLDQVSAKLSMWKATHLSFAGRVTLAK 770

Query: 365  AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
            +VI+A+P YPMM  ++PK  + DIQR QR FI GD +N R +HAV WD +T PK  GGLG
Sbjct: 771  SVIEAVPIYPMMSTAIPKACLDDIQRMQRNFIWGDTENKRRFHAVGWDKITAPKWKGGLG 830

Query: 185  MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAI 12
            MR+   MN ACL KLGW+L+  S+ LWC VL GKY R  + N+R +SK TDSSLWKA+
Sbjct: 831  MRKLEVMNKACLCKLGWKLQTNSKELWCNVLRGKYSRNAMLNNR-MSKATDSSLWKAL 887


>dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subterraneum]
          Length = 642

 Score =  211 bits (536), Expect = 1e-61
 Identities = 100/181 (55%), Positives = 128/181 (70%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           LT  SGF    SLG+YLGVPL+G+APKK+D+ YLI +VK KL+ WK + LS AGR TL+K
Sbjct: 14  LTILSGFNEASSLGKYLGVPLVGRAPKKSDFNYLINQVKTKLSAWKAKQLSFAGRVTLSK 73

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +VI+A+P YPMM   +PK  + ++Q+ QR FI GD+D +R YHAV WD VT+PK LGGLG
Sbjct: 74  SVIEAIPIYPMMTNLIPKACLNELQKIQRAFIWGDEDGNRKYHAVSWDNVTKPKALGGLG 133

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +RR   MN ACLMKLGW +R+  EALW  V+ GKY R   +    I +  DS LWK++  
Sbjct: 134 IRRLVHMNKACLMKLGWAIRSGQEALWIDVMKGKYVRQNSSFENPIVRAHDSYLWKSLTG 193

Query: 5   L 3
           L
Sbjct: 194 L 194


>gb|PNX86072.1| ribonuclease H, partial [Trifolium pratense]
          Length = 494

 Score =  207 bits (527), Expect = 2e-61
 Identities = 97/181 (53%), Positives = 128/181 (70%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L R SGFK   SLGRYLGVPLLG+APK+ D+QYL+++V+ KLAGWK + LS AGR TLAK
Sbjct: 206 LVRISGFKETTSLGRYLGVPLLGRAPKRNDFQYLVDQVEAKLAGWKAKQLSFAGRVTLAK 265

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +V++A+P YPMM   +PK  + DIQR QR FI GD ++ + +HAV W+ VT PK +GGLG
Sbjct: 266 SVLEAVPIYPMMTTKIPKSCLDDIQRIQRNFIWGDTESGKKFHAVSWEKVTTPKWMGGLG 325

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +R    MN ACL KLGW+L   ++  WC+++ GKY   E       ++ +DSSLWK +V 
Sbjct: 326 LRNLECMNQACLSKLGWKLFAGADDYWCQIMRGKYGHDE-------ARASDSSLWKVMVG 378

Query: 5   L 3
           L
Sbjct: 379 L 379


>gb|PNX97917.1| ribonuclease H [Trifolium pratense]
          Length = 712

 Score =  210 bits (534), Expect = 7e-61
 Identities = 97/181 (53%), Positives = 130/181 (71%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L R SGFK   S+GRYLGVPLLG+APK+ D+QYL+++V+ KLAGWK + LS AGR TLAK
Sbjct: 88  LLRISGFKEANSMGRYLGVPLLGRAPKRNDFQYLVDQVETKLAGWKAKQLSFAGRVTLAK 147

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +V++A+P YPMM   +PK  + DIQR QR FI GD +N R +HAV W+ VT PK +GGLG
Sbjct: 148 SVLEAIPIYPMMTTRIPKTCLSDIQRIQRSFIWGDTENGRKFHAVSWERVTTPKWMGGLG 207

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +R    MN ACL+KLGW++ + ++  WC+++ GKY+  E       ++ TDS+LWK I  
Sbjct: 208 LRNLEYMNLACLIKLGWKIFSGADDYWCRIMRGKYKNDE-------ARTTDSNLWKVIAG 260

Query: 5   L 3
           L
Sbjct: 261 L 261


>gb|PNY13536.1| ribonuclease H [Trifolium pratense]
          Length = 987

 Score =  210 bits (535), Expect = 6e-60
 Identities = 99/181 (54%), Positives = 131/181 (72%)
 Frame = -1

Query: 545  LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
            L R SGF    SLG+YLGVPL+G+APK++DY YLI +VK KL+ WK + LS AGR TL+K
Sbjct: 706  LVRRSGFNEALSLGKYLGVPLVGRAPKRSDYNYLINQVKNKLSNWKAKQLSFAGRVTLSK 765

Query: 365  AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
            AVI+A+P YPMM  ++PK  + +IQ+ QRGFI G+++  R YHAV W+ VT+PK LGGLG
Sbjct: 766  AVIEAIPIYPMMTTAIPKACLHEIQKIQRGFIWGEENGGRKYHAVNWENVTKPKVLGGLG 825

Query: 185  MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
            +RR   MN ACLMKL W +R+   A+W  V+ GKY R   +  + +SK  DSSLWK +V+
Sbjct: 826  IRRLVHMNKACLMKLAWAIRSGETAMWIDVIRGKYSRGNPSFDQVVSKTHDSSLWKNLVN 885

Query: 5    L 3
            +
Sbjct: 886  I 886


>dbj|GAU31911.1| hypothetical protein TSUD_270960 [Trifolium subterraneum]
          Length = 853

 Score =  209 bits (532), Expect = 7e-60
 Identities = 97/181 (53%), Positives = 130/181 (71%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L + SGF   E  G YLGVPL+G+APK+ DYQYL+++V LKL+ WK   LS AGR TLAK
Sbjct: 238 LLQISGFHGTEEFGNYLGVPLIGRAPKRRDYQYLVDQVSLKLSRWKATQLSFAGRLTLAK 297

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +V++A+P YPMM + +PK  + DIQ+ QR FI GD +  +++HA+ W+ +T PK LGGLG
Sbjct: 298 SVMEAVPIYPMMSSKIPKSCLDDIQKMQRSFIWGDTEQKKHFHAIRWEQITVPKWLGGLG 357

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +R+ + MN ACLMKL W  +  S  LWCKVL GKY+ A V + +  ++GTDSSLWK +V 
Sbjct: 358 VRKLDVMNNACLMKLNWSYQGGSNDLWCKVLRGKYEEARVQSQQ-KARGTDSSLWKNLVQ 416

Query: 5   L 3
           L
Sbjct: 417 L 417


>gb|PNY14273.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1048

 Score =  210 bits (535), Expect = 8e-60
 Identities = 99/178 (55%), Positives = 127/178 (71%)
 Frame = -1

Query: 545  LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
            LT  SGF    SLG+YLGVPL+G+APK++DY YLI +VK KL+ WK + LS AGR TL+K
Sbjct: 738  LTGLSGFNEASSLGKYLGVPLVGRAPKRSDYNYLINQVKTKLSAWKAKQLSFAGRVTLSK 797

Query: 365  AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
            +VI+A+P YPMM   +PK  + ++Q+ QR FI GD+D +R YHAV WD VT+PK LGGLG
Sbjct: 798  SVIEAIPIYPMMTNLIPKACLNELQKIQRAFIWGDEDGNRKYHAVSWDNVTKPKALGGLG 857

Query: 185  MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAI 12
            +RR   MN ACLMKLGW +R+  EALW  V+ GKY R   +    I +  DS LWK++
Sbjct: 858  IRRLVHMNKACLMKLGWAIRSGQEALWIDVMQGKYVRQNSSFANPIVRAQDSCLWKSL 915


>gb|PNY02920.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1010

 Score =  210 bits (534), Expect = 1e-59
 Identities = 99/181 (54%), Positives = 126/181 (69%)
 Frame = -1

Query: 545  LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
            L   SGFK     G+YLGVPL+G+APK+ADYQYLI++V  KL+ WK R LS AGR TLAK
Sbjct: 565  LLHMSGFKETTDFGKYLGVPLIGRAPKRADYQYLIDQVSNKLSAWKARQLSFAGRVTLAK 624

Query: 365  AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
            +V++A+P YPMM + +PK  + DIQR QR FI G+ DN R YHAV W  +T+PK +GGLG
Sbjct: 625  SVLEAVPIYPMMTSKIPKSCLNDIQRIQRNFIWGEYDNVRKYHAVKWSDLTKPKSMGGLG 684

Query: 185  MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
            +R    MN ACL+KLGW+++N S   WC VL GKY  A  +N    +K + SS WK +V 
Sbjct: 685  IRNLEIMNQACLLKLGWKIKNDSSDFWCDVLRGKYGMASFDNDE-AAKPSSSSTWKTLVQ 743

Query: 5    L 3
            L
Sbjct: 744  L 744


>gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1770

 Score =  210 bits (534), Expect = 1e-59
 Identities = 97/181 (53%), Positives = 130/181 (71%)
 Frame = -1

Query: 545  LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
            L   SGF+V  +LG+YLGVPL GKAPK+ D+QY+I +++ KL+ WK ++LS AGR +LAK
Sbjct: 1250 LRSISGFRVATNLGKYLGVPLTGKAPKRVDFQYVITQLQNKLSAWKAKNLSFAGRVSLAK 1309

Query: 365  AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
            +V++A+P YPMM  S+P  V+++ QR QRGFI G+    R YHAV W++ T+PK LGGLG
Sbjct: 1310 SVMEAIPIYPMMTTSIPLSVVKEAQRLQRGFIWGETSEGRKYHAVSWEIATKPKSLGGLG 1369

Query: 185  MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
            +RR + MN ACLMKLGW+L   S  +WC VL GKY R   +  +  +K  DSSLWK +V 
Sbjct: 1370 LRRLDVMNRACLMKLGWDLSRGSNGMWCAVLRGKYGRGVTDMMKVSAKTADSSLWKNLVQ 1429

Query: 5    L 3
            L
Sbjct: 1430 L 1430


>gb|PNX91173.1| ribonuclease H, partial [Trifolium pratense]
          Length = 390

 Score =  199 bits (505), Expect = 2e-59
 Identities = 93/178 (52%), Positives = 124/178 (69%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L R SG +   ++G+YLGVPL+G AP+K D+Q+LI+KV+ KL+GWK   LS AGR TL+K
Sbjct: 118 LARQSGCQETSNIGKYLGVPLIGDAPRKRDFQHLIDKVRNKLSGWKANQLSFAGRVTLSK 177

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +VI+A+P Y MM   +PK  + +IQ+ QRGF+ GDD+N R  H V W  +T PK+LGGL 
Sbjct: 178 SVIQAIPMYSMMTTLIPKSCLLEIQKLQRGFVWGDDENKRRLHTVRWSTLTIPKELGGLA 237

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAI 12
           +R  + MN AC+MKLGW ++ Q   LWC+VL GKY R        I K +DSSLWK+I
Sbjct: 238 VRDMSKMNLACIMKLGWSIKMQENNLWCQVLRGKYARGNSIFESPIVKKSDSSLWKSI 295


>dbj|GAU11214.1| hypothetical protein TSUD_342040 [Trifolium subterraneum]
          Length = 495

 Score =  198 bits (503), Expect = 6e-58
 Identities = 91/157 (57%), Positives = 116/157 (73%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L   SGF    SLG+YLGVPL+G+APK++DY YLI +VK KL+ WK + LS AGR TL+K
Sbjct: 128 LASISGFNEATSLGKYLGVPLVGRAPKRSDYSYLINQVKTKLSKWKAKQLSFAGRVTLSK 187

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           AVI+A+P YPMM  ++PK  +Q+IQ+ QR FI GDDD+ R YHAV W++VT+PK  GGLG
Sbjct: 188 AVIEAIPIYPMMTTAIPKACLQEIQKIQRAFIWGDDDDGRKYHAVNWEIVTKPKAYGGLG 247

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQR 75
           +RR   MN ACLMK+ W +R   +ALW  V+ GKY R
Sbjct: 248 IRRLVHMNQACLMKIAWAIRTGKDALWIDVIRGKYNR 284


>dbj|GAU26489.1| hypothetical protein TSUD_361220 [Trifolium subterraneum]
          Length = 577

 Score =  199 bits (507), Expect = 7e-58
 Identities = 93/181 (51%), Positives = 125/181 (69%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L + SGF+    LG+YLGVPL G AP+++D+QY+I +V  KLA WK   LS AGR TLAK
Sbjct: 88  LVQKSGFRETNHLGKYLGVPLTGNAPRRSDFQYIINQVSAKLARWKVNQLSFAGRVTLAK 147

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +VI+A P YPMM   +PKG +++I   QR FI G+ + +  YHA+ W+ VTRPK+ GGLG
Sbjct: 148 SVIEATPIYPMMTNRIPKGCLEEINMLQRKFIWGETEGNNKYHAIRWEDVTRPKRFGGLG 207

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +RR ++MN ACL+KLGW+  + +  LWC+VLHGKY   +  +   + K   SSLWK IV 
Sbjct: 208 LRRLDTMNQACLLKLGWKFNSGASDLWCEVLHGKYS-CQTISENMVIKAPASSLWKNIVK 266

Query: 5   L 3
           L
Sbjct: 267 L 267


>gb|PNY06182.1| ribonuclease H [Trifolium pratense]
          Length = 686

 Score =  201 bits (510), Expect = 1e-57
 Identities = 89/180 (49%), Positives = 128/180 (71%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L   SGF    SLG+YLG+PL+G+AP++ D++ L+EKVK+KL+ WK  +LS AGR TLAK
Sbjct: 56  LLHQSGFNETMSLGKYLGIPLIGRAPRRGDFEQLVEKVKVKLSSWKATNLSFAGRVTLAK 115

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +VI+A+P Y MM   +PK ++ DIQR QR FI G ++  + +H + WD +T P+  GGL 
Sbjct: 116 SVIQAIPIYTMMTIPIPKSILHDIQRIQRNFIWGHEEGTKKFHMIKWDNLTLPRFGGGLS 175

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +R  ++MN ACLMK+ WEL+  +++LWCKVL GKY R ++     I+K +DS +WK +VS
Sbjct: 176 IRNLSTMNNACLMKMSWELKQHNDSLWCKVLQGKYGRGQLEEGNVIAKVSDSFIWKGVVS 235


>gb|PNX79929.1| ribonuclease H, partial [Trifolium pratense]
          Length = 709

 Score =  199 bits (507), Expect = 5e-57
 Identities = 92/179 (51%), Positives = 125/179 (69%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L   SGFK   SLG+YLG+PL+G+AP+++D+++L+ KVKLKL+GWK  +LS AGR TLAK
Sbjct: 79  LLNQSGFKEAFSLGKYLGIPLVGRAPRRSDFEHLVNKVKLKLSGWKATNLSFAGRVTLAK 138

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +VI+A+P Y MM   +PK V+ DIQR QR FI G ++  +  H + WD +  PK+ GGL 
Sbjct: 139 SVIQAIPIYSMMTTPIPKSVLMDIQRLQRNFIWGHEEGQKKMHMIKWDTLMLPKENGGLA 198

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIV 9
           +R    MN ACLMK+GW LR  + +LWCKVL  KY R    N  +I+K +DS +WK +V
Sbjct: 199 VRNLPIMNQACLMKMGWNLREGNNSLWCKVLKEKYSRYRGANGTFIAKPSDSFIWKGVV 257


>dbj|GAU35481.1| hypothetical protein TSUD_384360 [Trifolium subterraneum]
          Length = 663

 Score =  199 bits (505), Expect = 6e-57
 Identities = 95/181 (52%), Positives = 124/181 (68%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L   SGF+V  SL +YLGVPL G+APK+ DYQY+IE+++ KL  WK  +LS AGR  L+K
Sbjct: 97  LQNISGFRVTSSLEKYLGVPLTGRAPKRGDYQYIIEQLQSKLTAWKAENLSFAGRVKLSK 156

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +V++AMP YPMM A +P  ++Q++QR QR FI GD  + R +HAV W++++ PK  GGLG
Sbjct: 157 SVMEAMPIYPMMTAIIPNSILQEVQRLQRDFIWGDSIHGRKHHAVRWELISTPKYRGGLG 216

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +RR   MN ACLMKLGWEL +    LW  VL GKY R   N     +K  DSSLW+ +V 
Sbjct: 217 LRRLEIMNKACLMKLGWELNHNDIGLWSVVLKGKYGRGINNLVNAQAKNNDSSLWRILVH 276

Query: 5   L 3
           L
Sbjct: 277 L 277


>dbj|GAU45807.1| hypothetical protein TSUD_87100 [Trifolium subterraneum]
          Length = 862

 Score =  201 bits (511), Expect = 7e-57
 Identities = 96/181 (53%), Positives = 125/181 (69%)
 Frame = -1

Query: 545 LTRASGFKVVESLGRYLGVPLLGKAPKKADYQYLIEKVKLKLAGWKTRHLSLAGRTTLAK 366
           L   SGF+V  SLG+YLGVPL G+APK+ DYQY+IE+++ KL  WK ++LS AGR  LAK
Sbjct: 445 LQNISGFRVTSSLGKYLGVPLTGRAPKRGDYQYIIEQLQSKLTAWKAKNLSFAGRVKLAK 504

Query: 365 AVIKAMPTYPMMVASVPKGVIQDIQRSQRGFI*GDDDNHRNYHAVCWDMVTRPKQLGGLG 186
           +V++AMP YPMM A +P  ++Q++QR QR FI GD  +   +HAV W++++ PK  GGLG
Sbjct: 505 SVMEAMPIYPMMTAIIPNSILQEVQRLQRDFIWGDSIHGIKHHAVRWELISTPKYRGGLG 564

Query: 185 MRRFNSMNTACLMKLGWELRNQSEALWCKVLHGKYQRAEVNNHRWISKGTDSSLWKAIVS 6
           +RR   MN ACLMKLGWEL +    LW  VL GKY R   N     +K  DSSLW+ +V 
Sbjct: 565 LRRLEIMNKACLMKLGWELNHNDVGLWSAVLEGKYGRDINNLVNAQAKNNDSSLWRILVH 624

Query: 5   L 3
           L
Sbjct: 625 L 625