BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00006614
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   224   3e-65
gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo...   196   4e-60
gb|PNX66338.1| retrovirus-related Pol polyprotein from transposo...   194   8e-60
gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposo...   193   4e-59
gb|KYP62066.1| Retrovirus-related Pol polyprotein from transposo...   191   7e-57
gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposo...   188   1e-56
dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subt...   199   2e-56
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   193   2e-56
gb|PNX76161.1| retrovirus-related Pol polyprotein from transposo...   191   5e-56
gb|KYP71144.1| Retrovirus-related Pol polyprotein from transposo...   189   9e-56
gb|PNX84939.1| retrovirus-related Pol polyprotein from transposo...   191   1e-55
gb|PNX77250.1| retrovirus-related Pol polyprotein from transposo...   191   1e-55
gb|PNY08092.1| histone deacetylase [Trifolium pratense]               197   2e-55
gb|PNX77046.1| retrovirus-related Pol polyprotein from transposo...   191   2e-55
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo...   191   2e-55
gb|PNX78102.1| retrovirus-related Pol polyprotein from transposo...   191   2e-55
gb|PNX75166.1| retrovirus-related Pol polyprotein from transposo...   189   3e-55
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo...   196   4e-55
gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifo...   188   6e-55
gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposo...   182   6e-55

>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  224 bits (572), Expect = 3e-65
 Identities = 107/149 (71%), Positives = 121/149 (81%)
 Frame = +2

Query: 2    KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
            KARLVAKGF+Q  G D+ +T+SPVVKP+T+R +LT+ALT  WP+ QLDVNNAFLNG L E
Sbjct: 977  KARLVAKGFNQKYGQDYSDTYSPVVKPITVRTVLTIALTSKWPLIQLDVNNAFLNGQLHE 1036

Query: 182  DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            DVYM QPQGF+QG+S+LVCKL+KAIYGLKQAPRAWYESLT TL SFGFQQS+CDPSLL F
Sbjct: 1037 DVYMQQPQGFIQGESTLVCKLHKAIYGLKQAPRAWYESLTNTLISFGFQQSKCDPSLLIF 1096

Query: 362  NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            N  GCC            TGSSNTAINLI
Sbjct: 1097 NKHGCCLLILIYVDDIIITGSSNTAINLI 1125


>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 293

 Score =  196 bits (499), Expect = 4e-60
 Identities = 95/146 (65%), Positives = 109/146 (74%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGFHQ  G D+ ETFSPV+KP+TIRVILTL +TY WPI Q+D+NNAFLNG L+E
Sbjct: 86  KARLVAKGFHQKFGCDYSETFSPVIKPITIRVILTLDVTYHWPIKQVDINNAFLNGFLEE 145

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           DVYM QP GF   D +LVCKLNKAIYGLKQAPRAWY+ LTKTL  FGF QSRCDPSLL +
Sbjct: 146 DVYMMQPPGFEVSDKTLVCKLNKAIYGLKQAPRAWYDRLTKTLLGFGFVQSRCDPSLLIY 205

Query: 362 NNRGCCXXXXXXXXXXXXTGSSNTAI 439
                C            TG+S++ +
Sbjct: 206 KQSQVCIYMLIYVDDIIVTGNSHSLV 231


>gb|PNX66338.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 258

 Score =  194 bits (494), Expect = 8e-60
 Identities = 92/142 (64%), Positives = 107/142 (75%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGFHQ  GFDF ETFSPV+KPVTIR+ILTLA+TY W + Q+D+NNAFLNG LQE
Sbjct: 82  KARLVAKGFHQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWSVQQIDINNAFLNGLLQE 141

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D +LVCKL+KA+YGLKQAPRAWYE LT+TL   GF +S+CDPSLL  
Sbjct: 142 EVYMTQPTGFENSDKTLVCKLHKALYGLKQAPRAWYERLTQTLLQMGFIKSKCDPSLLVH 201

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
           +  G C            TGS+
Sbjct: 202 HQNGACTYVLIYVDDILITGSA 223


>gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 274

 Score =  193 bits (491), Expect = 4e-59
 Identities = 95/149 (63%), Positives = 109/149 (73%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGFHQV GFDFHETFSPV+KP+TIR+ILTLALT +W + QLDVNNAFLNG L+E
Sbjct: 86  KARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEE 145

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            +YM QP GF  GD SLVCKLNKA+YGLKQAPR W+  L  TLT FGFQ S+CDPSL  +
Sbjct: 146 TIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQY 205

Query: 362 NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            ++               TGSS+  I  I
Sbjct: 206 QHQTHTIFILVYVDDIIITGSSSLLIQQI 234


>gb|KYP62066.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 373

 Score =  191 bits (484), Expect = 7e-57
 Identities = 94/149 (63%), Positives = 109/149 (73%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGFHQV GFDFHETFSPV+KP+TIR+I+TLALTY+W + QLDVNNAFLNG L+E
Sbjct: 39  KARLVAKGFHQVHGFDFHETFSPVIKPITIRIIITLALTYNWHLFQLDVNNAFLNGILEE 98

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            VYM QP GF   D SLVCKLNKA+YGLKQAPR W++ L  TL  FGFQ S+CDPSL  +
Sbjct: 99  TVYMVQPPGFEVEDKSLVCKLNKALYGLKQAPRQWFDRLKFTLLQFGFQASKCDPSLFMY 158

Query: 362 NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            ++               TGSS+  I  I
Sbjct: 159 KHQDQIIFLLVYVDDIIITGSSSQFIQQI 187


>gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 324

 Score =  188 bits (478), Expect = 1e-56
 Identities = 95/151 (62%), Positives = 109/151 (72%), Gaps = 2/151 (1%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGFHQV GFDFHETFSPV+KP+TIR+ILTLALT +W + QLDVNNAFLNG L+E
Sbjct: 86  KARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEE 145

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQA--PRAWYESLTKTLTSFGFQQSRCDPSLL 355
            +YM QP GF  GD SLVCKLNKA+YGLKQA  PR W+  L  TLT FGFQ S+CDPSL 
Sbjct: 146 TIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPPPRQWFNKLKLTLTRFGFQASKCDPSLF 205

Query: 356 TFNNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            + ++               TGSS+  I  I
Sbjct: 206 QYQHQTHTIFILVYVDDIIITGSSSLLIQQI 236


>dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subterraneum]
          Length = 1433

 Score =  199 bits (507), Expect = 2e-56
 Identities = 93/142 (65%), Positives = 111/142 (78%)
 Frame = +2

Query: 2    KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
            KARLVAKGFHQ  GFDF+ETFSPV+KPVTIR+ILTLA+TY WP+ Q+D+NNAFLNG LQE
Sbjct: 980  KARLVAKGFHQTPGFDFNETFSPVIKPVTIRLILTLAVTYKWPVQQIDINNAFLNGVLQE 1039

Query: 182  DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            +VYM QP+GF   D SLVCKL+K++YGLKQAPRAWY+ LT+TL   GF +SRCDPSLL  
Sbjct: 1040 EVYMTQPKGFESSDKSLVCKLHKSLYGLKQAPRAWYDKLTQTLLQMGFVKSRCDPSLLVH 1099

Query: 362  NNRGCCXXXXXXXXXXXXTGSS 427
            + +G C            TGS+
Sbjct: 1100 HQQGTCTYVLVYVDDILITGSA 1121


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  193 bits (491), Expect = 2e-56
 Identities = 95/149 (63%), Positives = 109/149 (73%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGFHQV GFDFHETFSPV+KP+TIR+ILTLALT +W + QLDVNNAFLNG L+E
Sbjct: 86  KARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEE 145

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            +YM QP GF  GD SLVCKLNKA+YGLKQAPR W+  L  TLT FGFQ S+CDPSL  +
Sbjct: 146 TIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQY 205

Query: 362 NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            ++               TGSS+  I  I
Sbjct: 206 QHQTHTIFILVYVDDIIITGSSSLLIQQI 234


>gb|PNX76161.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 459

 Score =  191 bits (484), Expect = 5e-56
 Identities = 90/142 (63%), Positives = 106/142 (74%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KPVTIR+ILTLA+TY WP+ Q+D+NNAFLNG L E
Sbjct: 70  KARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWPVQQIDINNAFLNGILHE 129

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D SLVCKL+K++YGLKQAPRAWYE LT+TL   GF  S+CDPSL+  
Sbjct: 130 EVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIASKCDPSLMVL 189

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
           + +G C            TGS+
Sbjct: 190 HQQGACTYVLIYVDDILITGSA 211


>gb|KYP71144.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 438

 Score =  189 bits (481), Expect = 9e-56
 Identities = 93/149 (62%), Positives = 109/149 (73%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGFHQV GFDFHETFSPV+KP+TIR+I+TLALTY+W + QLDVNNAFLNG L+E
Sbjct: 46  KARLVAKGFHQVHGFDFHETFSPVIKPITIRIIITLALTYNWHLFQLDVNNAFLNGILEE 105

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            VYM QP GF   D SLVCKLNKA+YG+KQAPR W++ L  TL  FGFQ S+CDPSL  +
Sbjct: 106 TVYMVQPPGFEVEDKSLVCKLNKALYGVKQAPRQWFDRLKFTLLQFGFQASKCDPSLFMY 165

Query: 362 NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            ++               TGSS+  I  I
Sbjct: 166 KHQDQIIFLLVYVDDIIITGSSSQFIQQI 194


>gb|PNX84939.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 499

 Score =  191 bits (484), Expect = 1e-55
 Identities = 90/142 (63%), Positives = 106/142 (74%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KPVTIR+ILTLA+TY WP+ Q+D+NNAFLNG L E
Sbjct: 139 KARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWPVQQIDINNAFLNGILHE 198

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D SLVCKL+K++YGLKQAPRAWYE LT+TL   GF  S+CDPSL+  
Sbjct: 199 EVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIASKCDPSLMVL 258

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
           + +G C            TGS+
Sbjct: 259 HQQGACTYVLIYVDDILITGSA 280


>gb|PNX77250.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 499

 Score =  191 bits (484), Expect = 1e-55
 Identities = 90/142 (63%), Positives = 106/142 (74%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KPVTIR+ILTLA+TY WP+ Q+D+NNAFLNG L E
Sbjct: 46  KARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWPVQQIDINNAFLNGILHE 105

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D SLVCKL+K++YGLKQAPRAWYE LT+TL   GF  S+CDPSL+  
Sbjct: 106 EVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIASKCDPSLMVL 165

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
           + +G C            TGS+
Sbjct: 166 HQQGACTYVLIYVDDILITGSA 187


>gb|PNY08092.1| histone deacetylase [Trifolium pratense]
          Length = 1339

 Score =  197 bits (500), Expect = 2e-55
 Identities = 94/149 (63%), Positives = 113/149 (75%)
 Frame = +2

Query: 2    KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
            KARLVAKGFHQ+QGFDF+ETFSPV+KP+TIR+IL+LA++Y WP+ QLDVNNAFLNG L E
Sbjct: 891  KARLVAKGFHQLQGFDFNETFSPVIKPITIRLILSLAISYKWPLKQLDVNNAFLNGSLDE 950

Query: 182  DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            +VYM QPQGF   DSSLVCKLNKA+YGLKQAPR W++ LT TL  FGF+ S+CDPSL T+
Sbjct: 951  EVYMVQPQGFEVSDSSLVCKLNKALYGLKQAPRQWFDKLTTTLLQFGFKASKCDPSLFTY 1010

Query: 362  NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            +                 TGSS T +  +
Sbjct: 1011 SKDRQVVYLLVYVDDIIITGSSITLVQTL 1039


>gb|PNX77046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 515

 Score =  191 bits (484), Expect = 2e-55
 Identities = 90/142 (63%), Positives = 106/142 (74%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KPVTIR+ILTLA+TY WP+ Q+D+NNAFLNG L E
Sbjct: 155 KARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWPVQQIDINNAFLNGILHE 214

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D SLVCKL+K++YGLKQAPRAWYE LT+TL   GF  S+CDPSL+  
Sbjct: 215 EVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIASKCDPSLMVL 274

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
           + +G C            TGS+
Sbjct: 275 HQQGACTYVLIYVDDILITGSA 296


>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  191 bits (485), Expect = 2e-55
 Identities = 92/142 (64%), Positives = 105/142 (73%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KP+TIRVILTLA+TY WP+ Q+DVNNAFLNG LQE
Sbjct: 82  KARLVAKGFLQTPGFDFTETFSPVIKPITIRVILTLAVTYKWPVQQIDVNNAFLNGWLQE 141

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D SLVCKL+K++YGLKQAPRAWYE LT+ L   GF  S+CDPSLL  
Sbjct: 142 EVYMKQPAGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQALLQMGFVTSKCDPSLLIH 201

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
             +G C            TGS+
Sbjct: 202 YQQGACTYVLIYVDDILITGSA 223


>gb|PNX78102.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  191 bits (485), Expect = 2e-55
 Identities = 91/142 (64%), Positives = 106/142 (74%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KPVTIR+ILTLA+TY W + Q+D+NNAFLNG LQE
Sbjct: 82  KARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWSVQQIDINNAFLNGILQE 141

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D +LVCKL+KA+YGLKQAPRAWY+ LT+TL   GF +SRCDPSLL  
Sbjct: 142 EVYMTQPPGFESSDKNLVCKLHKALYGLKQAPRAWYDRLTQTLLQMGFTKSRCDPSLLVH 201

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
           +  G C            TGS+
Sbjct: 202 HQNGACTYVLVYVDDILITGSA 223


>gb|PNX75166.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 499

 Score =  189 bits (481), Expect = 3e-55
 Identities = 90/143 (62%), Positives = 105/143 (73%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KPVT+R+ILTLA+TY W + Q+D+NNAFLNG LQE
Sbjct: 46  KARLVAKGFLQTPGFDFTETFSPVIKPVTVRLILTLAITYKWSVQQIDINNAFLNGLLQE 105

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D +LVCKL+K++YGLKQAPRAWYE LT TL   GF +SRCDPSLL  
Sbjct: 106 EVYMSQPAGFENSDKTLVCKLHKSLYGLKQAPRAWYERLTHTLLQMGFVKSRCDPSLLVH 165

Query: 362 NNRGCCXXXXXXXXXXXXTGSSN 430
           +  G C            TGS +
Sbjct: 166 HKHGACTYVLVYVDDILITGSDS 188


>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1516

 Score =  196 bits (497), Expect = 4e-55
 Identities = 91/149 (61%), Positives = 114/149 (76%)
 Frame = +2

Query: 2    KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
            KARLVAKGFHQ+QGFDF+ETFSPV+KP+TIR+IL+LA++Y WP+ QLDVNNAFLNG L+E
Sbjct: 1062 KARLVAKGFHQIQGFDFNETFSPVIKPITIRLILSLAVSYKWPLKQLDVNNAFLNGLLEE 1121

Query: 182  DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
            +VYM QP GF + D +LVCKLNKA+YGLKQAPR W++ LT TL  FGF+ S+CDPSL T+
Sbjct: 1122 EVYMIQPPGFEEADENLVCKLNKALYGLKQAPRQWFDRLTTTLLQFGFKASKCDPSLFTY 1181

Query: 362  NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
            +                 TGSS+T +  +
Sbjct: 1182 SQNKQVVYLLVYVDDIIITGSSSTLVQTL 1210


>gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifolium pratense]
          Length = 476

 Score =  188 bits (478), Expect = 6e-55
 Identities = 89/142 (62%), Positives = 107/142 (75%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF Q  GFDF ETFSPV+KPVT+R+ILTLA+TY W + Q+D+NNAFLNG LQE
Sbjct: 25  KARLVAKGFLQKPGFDFTETFSPVIKPVTVRIILTLAVTYKWAVQQIDINNAFLNGILQE 84

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D SLVCKL+K++YGLKQAPRAWY+ LT+TL   GF +S+CDPSLL  
Sbjct: 85  EVYMTQPTGFEVSDKSLVCKLHKSLYGLKQAPRAWYDKLTQTLLQMGFVKSKCDPSLLVH 144

Query: 362 NNRGCCXXXXXXXXXXXXTGSS 427
           + +G C            TGS+
Sbjct: 145 HQQGACTYVLIYVDDILITGSA 166


>gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 269

 Score =  182 bits (463), Expect = 6e-55
 Identities = 87/149 (58%), Positives = 109/149 (73%)
 Frame = +2

Query: 2   KARLVAKGFHQVQGFDFHETFSPVVKPVTIRVILTLALTYSWPIHQLDVNNAFLNGHLQE 181
           KARLVAKGF+Q  GFD+HETFSPV+KPVT+R+ILTLALT+ WPI QLDVNNAFLNG L+E
Sbjct: 86  KARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEE 145

Query: 182 DVYMHQPQGFVQGDSSLVCKLNKAIYGLKQAPRAWYESLTKTLTSFGFQQSRCDPSLLTF 361
           +VYM QP GF   D +LVCKL+KAIYGLKQAPRAW++ L  TL    F  S+CDPSL  +
Sbjct: 146 EVYMTQPPGFEASDKNLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFVY 205

Query: 362 NNRGCCXXXXXXXXXXXXTGSSNTAINLI 448
           ++                TG+++T ++ +
Sbjct: 206 SHANNVIYILVYVDDIIITGNNSTILHTL 234