BLASTX nr result
ID: Astragalus23_contig00006560
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus23_contig00006560
(1323 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHN20323.1| Putative ribonuclease H protein, partial [Glycine... 366 e-120
gb|KHN28363.1| Putative ribonuclease H protein, partial [Glycine... 363 e-119
dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subt... 333 e-105
ref|XP_019418409.1| PREDICTED: uncharacterized protein LOC109329... 336 e-102
gb|KYP44988.1| Putative ribonuclease H protein At1g65750 family ... 316 e-100
gb|KYP45153.1| Putative ribonuclease H protein At1g65750 family ... 321 2e-99
gb|KYP55132.1| Putative ribonuclease H protein At1g65750 family ... 315 3e-99
gb|KYP48155.1| Putative ribonuclease H protein At1g65750 family ... 315 1e-98
dbj|GAU48210.1| hypothetical protein TSUD_404970 [Trifolium subt... 329 5e-97
dbj|GAU25119.1| hypothetical protein TSUD_274080 [Trifolium subt... 318 4e-96
gb|PNY15032.1| ribonuclease H, partial [Trifolium pratense] 323 2e-95
gb|PNX89544.1| ribonuclease H, partial [Trifolium pratense] 298 8e-94
dbj|GAU26515.1| hypothetical protein TSUD_361480 [Trifolium subt... 306 6e-92
dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subt... 314 1e-91
dbj|GAU38148.1| hypothetical protein TSUD_395930 [Trifolium subt... 294 4e-91
gb|KYP78141.1| Putative ribonuclease H protein At1g65750 family,... 293 6e-91
gb|PNX95738.1| ribonuclease H, partial [Trifolium pratense] 308 4e-90
dbj|GAU27449.1| hypothetical protein TSUD_161350 [Trifolium subt... 291 5e-90
dbj|GAU47706.1| hypothetical protein TSUD_177110 [Trifolium subt... 303 7e-90
gb|PNX79011.1| ribonuclease H, partial [Trifolium pratense] 290 1e-89
>gb|KHN20323.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 417
Score = 366 bits (940), Expect = e-120
Identities = 173/411 (42%), Positives = 244/411 (59%), Gaps = 6/411 (1%)
Frame = +3
Query: 81 LSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYKVPKKVLNELIRLQRAFLWGGDEAHRK 260
LS WRG+ LSIGG++TLINSVLSSLPLY+FSF+K PK V+ EL ++QR FLWG E RK
Sbjct: 1 LSCWRGRNLSIGGKVTLINSVLSSLPLYFFSFFKAPKVVIKELTQIQRDFLWGSHEEERK 60
Query: 261 IAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKWRWKCLVGGDSLWHQVLLSKYGNLSRW 440
I WVSW+ IC PK +GGLG+KNLE FNI+LL+KW+W+C+ ++LW +L +YGNL
Sbjct: 61 ICWVSWEDICKPKKEGGLGVKNLEVFNISLLAKWKWRCIHDHNALWRDLLAFRYGNLIAK 120
Query: 441 RDGRISHYSMRNASIWWRDISVLGNEFSGDENWFKRVTHLRVGRGDKVLFWKDSWCGTSP 620
+ + SIWWRD+ +L + S ++N+F+R VG G +LFW + W G+ P
Sbjct: 121 QTCSLDRSWGTKDSIWWRDLMLLEKDLSQNQNFFQRAVSCDVGDGQSILFWYNKWLGSEP 180
Query: 621 FCQLFPDLYDACLNKNDVVQKHGVWNNGMWRWNI-----IVDGDTTNLNDLQVILRDVTL 785
FP+L+ + + V W W W + + + +L+ L+ IL DV L
Sbjct: 181 LKDAFPELFAISSQQLESVGNASSWRRDQWTWGLTWKRQLNPNEEESLHSLETILVDVHL 240
Query: 786 CWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAGTQFGAEIVAACVKLWKTNVPTKAKVLV 965
D W WS+ N K FTV CYS+ M+ TQ ++I+ +WK VP+K +
Sbjct: 241 VAESHDRWKWSLHNSKLFTVSSCYSFAMSLVNQTQMNSDILDILSIVWKVPVPSKVALFC 300
Query: 966 WRLFIDRLPTRDALVRRGVITPGAETRCVCCLREEECANHLFFGCNRTKYAWRRILAWAG 1145
WRL +DRLPT+D L+RR V+ +RC C +E HLFF C+ +K W+ IL+W G
Sbjct: 301 WRLLLDRLPTKDNLIRRNVVI--NNSRCSLCDSCDENVVHLFFHCDFSKCIWKEILSWIG 358
Query: 1146 VADLNETDAVMHFCRFGQQL-MGRKLKRLKFVLWIATIWAIWHARNKKIFE 1295
+ D+ V HF + + L ++ F+ W+AT+W IW RN IF+
Sbjct: 359 IVDVIAVGGVQHFWEYDRLLKYNTSRNKVPFMFWLATLWIIWQVRNNSIFK 409
>gb|KHN28363.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 417
Score = 363 bits (931), Expect = e-119
Identities = 172/411 (41%), Positives = 242/411 (58%), Gaps = 6/411 (1%)
Frame = +3
Query: 81 LSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYKVPKKVLNELIRLQRAFLWGGDEAHRK 260
LS WRG+ LSIGG++TLINSVLSSLPLY FSF+K PK V+ EL ++QR FLWG E RK
Sbjct: 1 LSCWRGRNLSIGGKVTLINSVLSSLPLYLFSFFKAPKVVIKELTQIQRDFLWGSHEEERK 60
Query: 261 IAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKWRWKCLVGGDSLWHQVLLSKYGNLSRW 440
I WVSW+ IC PK +GGLG+KNLE FNI+LL+KW+W+C+ ++LW +L +YGNL
Sbjct: 61 ICWVSWEDICKPKKEGGLGVKNLEVFNISLLAKWKWRCIHDHNALWRDLLAFRYGNLIAK 120
Query: 441 RDGRISHYSMRNASIWWRDISVLGNEFSGDENWFKRVTHLRVGRGDKVLFWKDSWCGTSP 620
+ + SIWWRD+ +L + S ++N+F+R VG G +LFW + W G+ P
Sbjct: 121 QTCSLDRSWGTKDSIWWRDLMLLEKDLSQNQNFFQRAVSCDVGDGQSILFWYNKWLGSEP 180
Query: 621 FCQLFPDLYDACLNKNDVVQKHGVWNNGMWRWNI-----IVDGDTTNLNDLQVILRDVTL 785
FP+L+ + V G W W W + + + +L+ L+ IL DV L
Sbjct: 181 LKDAFPELFAISSQQLVSVGNAGSWRRDQWTWGLTWKRQLNPNEEESLHSLETILVDVHL 240
Query: 786 CWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAGTQFGAEIVAACVKLWKTNVPTKAKVLV 965
D W WS+ N K FTV CYS+ M+ TQ ++I+ +WK VP+K +
Sbjct: 241 VAESHDRWKWSLHNSKLFTVSSCYSFAMSLVNQTQMNSDILDILSIVWKVPVPSKVALFC 300
Query: 966 WRLFIDRLPTRDALVRRGVITPGAETRCVCCLREEECANHLFFGCNRTKYAWRRILAWAG 1145
WRL +DRLPT+D L+RR V+ +RC C +E HLFF C+ + W+ +L+W G
Sbjct: 301 WRLLLDRLPTKDNLIRRNVVI--NNSRCSLCDSCDENVVHLFFHCDFSNCIWKEVLSWIG 358
Query: 1146 VADLNETDAVMHFCRFGQQL-MGRKLKRLKFVLWIATIWAIWHARNKKIFE 1295
+ D+ V HF + + L ++ F+ W+AT+W IW RN IF+
Sbjct: 359 IVDVIAVGGVQHFWEYDRLLKYNTSRNKVPFMFWLATLWIIWQVRNNSIFK 409
>dbj|GAU37021.1| hypothetical protein TSUD_207270 [Trifolium subterraneum]
Length = 596
Score = 333 bits (853), Expect = e-105
Identities = 165/391 (42%), Positives = 232/391 (59%), Gaps = 5/391 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
FLGI VGANPRR TW PV+ + + S W G L+ GGRITLINSVL+SLPLY+FSF+K
Sbjct: 189 FLGIPVGANPRRKETWRPVVEAMSTRFSRWSGSHLTYGGRITLINSVLASLPLYFFSFFK 248
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
VLN+L+ +QR FLWGG +K+ WV W +CLP+ GGLG+KNL+ FNIALLSKW
Sbjct: 249 ASICVLNQLVSIQRNFLWGGGLEEKKMCWVKWDHVCLPRDLGGLGVKNLKLFNIALLSKW 308
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDENWF 542
+W+C+ +++W +VL +YG+LS + + S SIWW+D+ +G F D WF
Sbjct: 309 KWRCVNDSEAVWKEVLRHRYGHLSSFILNGVPISSNFKTSIWWKDMVNIGETFGYD--WF 366
Query: 543 KRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNG--MWRW 716
+ T + VG G+ + FW + W G + LFP+L+D K+ V + NN +WRW
Sbjct: 367 QSNTRIIVGNGNNIAFWTNRWLGNNVLSDLFPNLFDKEAFKDAKVADRVINNNDGTIWRW 426
Query: 717 ---NIIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAGT 887
+ + + +L +LQV+L +L D W W + FT+K CY+ L++
Sbjct: 427 EWRGRLTEAEELDLAELQVLLTGFSLNPTCCDRWKWIPDSVGDFTIKSCYNVLIHVGNTV 486
Query: 888 QFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCLRE 1067
++ A KLWK ++P+K + WRL +++LPTR AL R ++ E CV C R
Sbjct: 487 VLSPHLLVAIRKLWKNDLPSKVGIFGWRLLLEKLPTRAALAHRNILNTDDELLCVFCSRV 546
Query: 1068 EECANHLFFGCNRTKYAWRRILAWAGVADLN 1160
E +NHLFF KY WRRI W G +L+
Sbjct: 547 REDSNHLFFNRVHMKYLWRRIHDWLGNENLS 577
>ref|XP_019418409.1| PREDICTED: uncharacterized protein LOC109329191 [Lupinus
angustifolius]
Length = 953
Score = 336 bits (861), Expect = e-102
Identities = 172/450 (38%), Positives = 247/450 (54%), Gaps = 10/450 (2%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
FLGI VGANP+R +TW V++ K KLS W+ K LS GGR+TL+ SVLSSLP+YYFSF+K
Sbjct: 469 FLGIPVGANPKRLSTWSLVIDTFKRKLSRWQQKLLSFGGRVTLLKSVLSSLPIYYFSFFK 528
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
P +++EL R+QR FLWG E ++ I WV WK +C K +GGLG+KNL FN+ALL KW
Sbjct: 529 APVSIIHELERIQRRFLWGRGEVNKGIHWVRWKEVCRSKEEGGLGVKNLGLFNLALLGKW 588
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDISVLGNEFSG-DENW 539
RW L +SLW +VL S YG + R G + + S WWRD+ L N +G ++ W
Sbjct: 589 RWHMLSSSESLWVKVLRSIYGVEAVVRGGLVDVECFKKGSSWWRDLGCLCNRDNGFNKGW 648
Query: 540 FKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRWN 719
F RVG G LFW+D W G F L+ LNK+ + G W NG+W W
Sbjct: 649 FNEGVRRRVGSGQSTLFWRDIWVGGECLKNCFERLFQVTLNKDACISSMGEWRNGVWCWL 708
Query: 720 I-----IVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
+ + + +NDL + +V L +D W+W ++V+ Y L N
Sbjct: 709 LNWRRSLFLWEQDEVNDLLNKVEEVRLVQGNEDGWLWVHDKNGTYSVRNAYKVLQNEVRN 768
Query: 885 TQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCLR 1064
+ +LW + VP+K K WRLF+ +PT L RRG+I T C C
Sbjct: 769 DNY-----LHYKRLWASKVPSKLKCFAWRLFVGGVPTWMNLARRGIIGSLPSTLCAFCGE 823
Query: 1065 EEECANHLFFGCNRTKYAWRRILAWAGVADL----NETDAVMHFCRFGQQLMGRKLKRLK 1232
EE ++HLFF C+ + W+++ + G+ + ++ + H+ FG+ +K +
Sbjct: 824 LEESSDHLFFTCSLSYSVWQKLYSLFGIYSILPSSTGSNFLSHWHLFGE---AKKFHQQW 880
Query: 1233 FVLWIATIWAIWHARNKKIFEGIACNINSI 1322
+W TIW++W RNK IFE + N++ +
Sbjct: 881 MTIWFVTIWSLWLVRNKIIFEESSFNVDEV 910
>gb|KYP44988.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 481
Score = 316 bits (809), Expect = e-100
Identities = 162/441 (36%), Positives = 239/441 (54%), Gaps = 9/441 (2%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ +G R+ +TW PVL K++ KL++W+ K +S+ GRI+LINSVLSS+PLY+ SFY+
Sbjct: 7 YLGLPIGETARKASTWHPVLVKLRNKLATWKNKSISLAGRISLINSVLSSIPLYFMSFYR 66
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+P VL E++ +QR FLWG DE +KI WV W + +PKS GGLGIK+L +FN ALL+KW
Sbjct: 67 LPTIVLKEIVSIQRNFLWGRDENVKKICWVRWDKVTMPKSMGGLGIKDLRSFNTALLAKW 126
Query: 363 RWKCLVGGDSLWHQVLLSKYG---NLSRWRDGRISHYSMRNASIWWRDI-SVLGNEFSGD 530
RW DSLW +VL SKYG +L+ DGR R S WW D+ G +
Sbjct: 127 RWNLFNHADSLWGKVLTSKYGGYSSLADVGDGR----QARFYSEWWTDLKKTCGGQ--DQ 180
Query: 531 ENWFKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMW 710
+ WF ++ ++G G K+ FW+D+W G FP +Y K++ + G W W
Sbjct: 181 QQWFDKLVRWKIGDGRKIRFWQDTWLGGESLINAFPRIYINSNQKHNKLADMGNWVENEW 240
Query: 711 RWNII-----VDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNF 875
+W + D + Q +L V L D+WVW + F+V Y+ N
Sbjct: 241 KWQFYWRRTWLQRDQIQWSTFQHLLSQVNLVKQDQDKWVWLANSTGDFSVHSAYTAFHNL 300
Query: 876 YAGTQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVC 1055
Q + + C LW+ +P A VL+WRL + LPT + L RGVI ++ RC
Sbjct: 301 ----QHIGQTNSVCGGLWQLGIPWTAAVLMWRLVQNALPTVENLQSRGVILSDSQGRCAF 356
Query: 1056 CLREEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKF 1235
C +E ++HLFF C T W +W ++ + + + C++ + + +
Sbjct: 357 CNEVQETSSHLFFCCRITNKVWHHCWSWISISTVLPQSTLENVCQYPYLCLTQHERSKWD 416
Query: 1236 VLWIATIWAIWHARNKKIFEG 1298
++ A IW IW RN KIF+G
Sbjct: 417 IIRSAVIWCIWRCRNNKIFKG 437
>gb|KYP45153.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 689
Score = 321 bits (823), Expect = 2e-99
Identities = 171/439 (38%), Positives = 239/439 (54%), Gaps = 7/439 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LGI +GANPRR TW+PV+ K KLSSWR LS+ GRI LINSVL+SLPLY SFY+
Sbjct: 218 YLGIPIGANPRRSKTWQPVVLSFKKKLSSWRASTLSMAGRICLINSVLTSLPLYIMSFYR 277
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+PK V +L +QR FLWGG +++AWVSW+ IC PK +GGLGIK L+ FN ALL+KW
Sbjct: 278 MPKMVTKQLTSIQRNFLWGGKLDEKRMAWVSWEKICRPKKEGGLGIKKLDTFNAALLAKW 337
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNA--SIWWRDISVLGNEFSGDEN 536
RW +S+W ++LLSKYG D + + +R + S+WW D+ E + D +
Sbjct: 338 RWGLFQQPESMWARILLSKYG------DTIMHNTRLRGSSDSMWWGDVLKASGEDTSD-S 390
Query: 537 WFKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRW 716
WF R+G GD++ FW D+W P FP ++ L K++VV G W+ G W+W
Sbjct: 391 WFMDSLSWRLGMGDRIRFWSDAWAEAEPLANRFPRIFSNSLQKSNVVANMGHWSRGRWQW 450
Query: 717 NIIVDGD--TTNLNDLQVILRDV---TLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYA 881
T LND+Q + V L D +W++ + F+V+ Y LM+
Sbjct: 451 RFQWRRAWFTWELNDVQQFMNIVEARVLIEGVQDSRLWTLDSSGCFSVRSGYRALMDRGP 510
Query: 882 GTQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCL 1061
+Q A W VP K K +WRLF+ LPT++ L+RR VI + C C
Sbjct: 511 SSQLPNVAAVA----WDIKVPPKVKCFIWRLFMGALPTKENLLRRNVIVLRDQATCPFCN 566
Query: 1062 REEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFVL 1241
+ E + H+ C+ T W++ L W + +F L+ +K V+
Sbjct: 567 ADIESSEHILLYCSSTDPIWKKWLLWLDSPTPLSSSFEGNFFAHPSILLSKKRVDQWHVI 626
Query: 1242 WIATIWAIWHARNKKIFEG 1298
W A +W IW ARNK +FEG
Sbjct: 627 WTAILWCIWRARNKYVFEG 645
>gb|KYP55132.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 494
Score = 315 bits (806), Expect = 3e-99
Identities = 160/438 (36%), Positives = 239/438 (54%), Gaps = 6/438 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ +G NPRR W+ V++K++ +L+ W+ K LS+ GR+ LINSVLSSLPL+YFSFYK
Sbjct: 19 YLGLPIGDNPRRKVMWKHVIHKLQKRLARWKNKLLSMAGRVCLINSVLSSLPLFYFSFYK 78
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+P+ V E+ +QR FLWG ++ RK+AWVSW IC KSQGGLGIK+L FN +LL+KW
Sbjct: 79 MPRTVQKEVESIQRKFLWGEEQDQRKVAWVSWDKICRKKSQGGLGIKDLSLFNDSLLAKW 138
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDI-SVLGNEFSGDENW 539
RW +LW +VL SKYG + +G + ++ S+WWRD+ V G + S E W
Sbjct: 139 RWNMYHDTSNLWVRVLESKYGGWVKLIEGD----NKKDYSMWWRDLRRVCGGDCS--EQW 192
Query: 540 FKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRWN 719
F + + +V G + FW+D W G + +P LY + + G W G W W+
Sbjct: 193 FDKCMNWKVKNGKRTRFWEDKWIGQQTLAEDYPRLYINSGQQQTTIHNMGHWLEGGWEWS 252
Query: 720 I-----IVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
+ D ++ L++V L N +D W+W +GN ++TVK Y L ++ G
Sbjct: 253 FRWRRRWLGRDEIQWEEMMGRLQEVVLDKNSEDHWIWMVGNNMEYTVKATYDQLSSWKNG 312
Query: 885 TQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCLR 1064
+ G +LW N+P + +++WRL + LPT L R + +E C C R
Sbjct: 313 GEEG----GVYKELWSLNLPPRVSIMIWRLLREGLPTTMNLKSRNIELGESERLCSLCSR 368
Query: 1065 EEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFVLW 1244
EE +H+FF C T W+ W +A + + HF + + +K+ VLW
Sbjct: 369 AEESTSHMFFECGITDCVWKTCYNWIDLATVLPANPSNHFQQMPISISSKKISDRWKVLW 428
Query: 1245 IATIWAIWHARNKKIFEG 1298
A ++ +W RN F G
Sbjct: 429 SAVVYNVWMMRNNIRFNG 446
>gb|KYP48155.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 563
Score = 315 bits (808), Expect = 1e-98
Identities = 159/436 (36%), Positives = 246/436 (56%), Gaps = 6/436 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ +GANPR+ TW PV K KL+ W+ K LS+ GR LINSVLSSLPL+Y SF++
Sbjct: 95 YLGLPIGANPRKLATWNPV----KKKLARWKNKFLSLAGRACLINSVLSSLPLFYLSFFR 150
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+PKKV +L+RLQ FLWG H+K+AW+SW +C K+QGGLGIK++ FN +LL KW
Sbjct: 151 IPKKVHLQLVRLQWNFLWGHMRDHKKVAWISWDRVCRSKNQGGLGIKDIILFNESLLGKW 210
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDI-SVLGNEFSGDENW 539
RW +SLW ++L SKYG WR+ + R+ S WW+D+ V G+ + ++ W
Sbjct: 211 RWNLFHDSNSLWVKLLESKYGG---WRN-LVEGEDKRSHSYWWKDLRRVCGS--NNEQQW 264
Query: 540 FKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRWN 719
F + ++ G+++ FW+D W G FP LY L + ++ G W+ +W W+
Sbjct: 265 FDNMMTWKLMDGERIKFWEDKWLGNISLANKFPRLYVNSLQNHWTIKNMGTWSGTLWIWD 324
Query: 720 I-----IVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
+ + D T L +L+ +LR+V+L D WVW G +++TV Y +++
Sbjct: 325 LKWRRRWLRRDDTQLQELESLLREVSLDNMHQDFWVWDPGQDEKYTVNSAYKEKLSW--- 381
Query: 885 TQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCLR 1064
++G + + +LWK +P KA L+WRL+ +PT D L +R + + C C
Sbjct: 382 -KYGRDEIPVLKQLWKLKIPPKAATLIWRLYQKGMPTVDNLTKRNIGVSFEDQLCRFCKG 440
Query: 1065 EEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFVLW 1244
+E ++HLFF CN W+ WA ++ + ++ HF + + K+ + +LW
Sbjct: 441 TQETSHHLFFVCNTIDTLWKACYGWANLSTVLPSNTEQHFMQLPCSISFGKVAKGWKILW 500
Query: 1245 IATIWAIWHARNKKIF 1292
A ++ IW RN IF
Sbjct: 501 CAVVYNIWLVRNNIIF 516
>dbj|GAU48210.1| hypothetical protein TSUD_404970 [Trifolium subterraneum]
Length = 1653
Score = 329 bits (843), Expect = 5e-97
Identities = 170/446 (38%), Positives = 248/446 (55%), Gaps = 6/446 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
FLGI VGANPRR TW+PV++ + +LS+W+ + LS GGR+TLINSVL+SLPLY+FSF+K
Sbjct: 1172 FLGIPVGANPRRRETWKPVVDAMTKRLSTWKSRHLSFGGRVTLINSVLTSLPLYFFSFFK 1231
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
P +L L R+QR+FLWGG +K+ WV W ICL K QGGLG+KNL FNIALL+KW
Sbjct: 1232 APCCILRLLERIQRSFLWGGGLEDKKLCWVKWDQICLSKDQGGLGVKNLNLFNIALLNKW 1291
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDENWF 542
+W+ L +LW ++L +YG+L G S +S WW+D+ +G + +WF
Sbjct: 1292 KWRFLTEDGALWAELLRFRYGHLPTQLMGGASFSIGAKSSTWWKDVIGMGK--GAEFDWF 1349
Query: 543 KRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNG-----M 707
K VG G + FW W G PF ++FP+L+ A + +V + NG
Sbjct: 1350 KSNMRACVGNGVNIGFWNFKWFGNHPFSEIFPNLF-AKEERPNVSIAERLGGNGEAFVRH 1408
Query: 708 WRW-NIIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
W+W + + D + + +L +LR +L D W W + F+VK Y+ L+
Sbjct: 1409 WQWSDPLSDSEHQQVAELTELLRGFSLQPGHQDSWRWILETTGLFSVKSYYNALVKSRLI 1468
Query: 885 TQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCLR 1064
+ + ++ A +LWK +VP+K WRL + RLP R AL RG++T + CV C
Sbjct: 1469 VELDSNVLTAINQLWKNDVPSKVLFFGWRLLLQRLPIRIALNHRGILTNPQDLPCVFCSV 1528
Query: 1065 EEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFVLW 1244
E HLFF C+ W + W G + HF FG + ++R++ ++W
Sbjct: 1529 FYEDCVHLFFHCSFVNCVWEAVYNWIGKDYHAGAEGWSHFKVFGDMVNSTNIERVRHLIW 1588
Query: 1245 IATIWAIWHARNKKIFEGIACNINSI 1322
+AT W +W RN IF G + +S+
Sbjct: 1589 LATTWNLWKLRNNVIFNGATPSASSL 1614
>dbj|GAU25119.1| hypothetical protein TSUD_274080 [Trifolium subterraneum]
Length = 937
Score = 318 bits (815), Expect = 4e-96
Identities = 164/437 (37%), Positives = 242/437 (55%), Gaps = 7/437 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ VGANPRR +TWEPVL+ ++ +L +W K +S+GGRI LINS+L+S+P+++ SF K
Sbjct: 459 YLGLPVGANPRRSSTWEPVLDSLRKRLRAWGNKYVSLGGRIVLINSILNSIPIFFLSFLK 518
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+P VL + R+QR FLWGG + KI+WV WK +C P+SQGGLG++++ N++LL KW
Sbjct: 519 LPAAVLKSITRIQREFLWGGVKGGSKISWVKWKEVCKPRSQGGLGVRDVGKVNLSLLIKW 578
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDENWF 542
RWK L ++W VL+++YG +R I +AS WWRD+ + + + + +WF
Sbjct: 579 RWKLLQKDAAVWKDVLVARYGENARHNVLWIGCPIPSSASCWWRDLCRI--DLTEEGSWF 636
Query: 543 KRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGM--WRW 716
+ RVGRGD FWKD W G P C+ FP L+ L K +V + V G+ W W
Sbjct: 637 AKNISRRVGRGDTTRFWKDCWVGQVPLCESFPRLFSISLQKEALVSEIRVGGEGVSWWEW 696
Query: 717 ---NIIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG- 884
+ + L LQ + + DD W W + + FTVK Y L +A
Sbjct: 697 GWRRSLFVWEEELLLGLQDFISPMAFS-TDDDVWYWGLEDGGVFTVKSAYLLLGRMFASF 755
Query: 885 TQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCLR 1064
+ F + +W++ P+K W+L +R+PTRD L RRG++ G CV C
Sbjct: 756 SMFNVCELRVLNSIWRSPAPSKVIAFSWKLLRNRIPTRDCLSRRGILAAGGSRECVHCQG 815
Query: 1065 EEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHF-CRFGQQLMGRKLKRLKFVL 1241
EE A HLF C+ W I W GV + + + F C G ++ K ++
Sbjct: 816 REETALHLFLFCDFAFRVWSAIFQWLGVVIVMPPNLFILFDCFVGAAGCNKRAKGF-LLI 874
Query: 1242 WIATIWAIWHARNKKIF 1292
W T+WAIW +RN+ +F
Sbjct: 875 WHTTVWAIWRSRNEILF 891
>gb|PNY15032.1| ribonuclease H, partial [Trifolium pratense]
Length = 1490
Score = 323 bits (829), Expect = 2e-95
Identities = 178/447 (39%), Positives = 240/447 (53%), Gaps = 7/447 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
FLGI VGANPRR TW PVL + +L+SW + LS GGR+TLINSVL+S+PLY+FSF+K
Sbjct: 1065 FLGIPVGANPRRRETWNPVLEAMTKRLNSWNSRNLSFGGRLTLINSVLASIPLYFFSFFK 1124
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
P VL + R+QR FLWGG +K+ WV W +CLPK +GGL +KNLE FN+ALL KW
Sbjct: 1125 APICVLKSIERIQRNFLWGGSLEEKKLCWVKWDQVCLPKEEGGLRVKNLELFNLALLCKW 1184
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDENWF 542
+W+ L D++W +L +Y + + G S N+SIWWRD+ G S +NWF
Sbjct: 1185 KWRLLHNDDAIWFDLLRHRYKSFPSFLLGDHETVSYANSSIWWRDVISSGRGVS--DNWF 1242
Query: 543 KRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQK--HGVWNNGMWRW 716
K RVG G FW W G FC+LFPDLY + KN V + G + MWRW
Sbjct: 1243 KSNISCRVGNGHNTNFWNFRWYGNQAFCELFPDLYAKEVRKNVSVAELLGGAGSGLMWRW 1302
Query: 717 N----IIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
N + V+ + LN LQ +L D +L D+W W + F+VK CY L+
Sbjct: 1303 NWATPLDVNEEQQALN-LQGLLADFSLHPTNQDQWRWLSESNGVFSVKSCYFSLLETRQA 1361
Query: 885 TQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITP-GAETRCVCCL 1061
++ A +LWKT+VP+K KV WRL +++LPTR AL RG I P GAE
Sbjct: 1362 EYVEENVLEAIKRLWKTDVPSKIKVFGWRLLLNKLPTRAALNHRGKILPLGAE------- 1414
Query: 1062 REEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFVL 1241
W HF FG + +++++
Sbjct: 1415 ------------------GWH------------------HFTLFGDLFNVKDKGCVRYLV 1438
Query: 1242 WIATIWAIWHARNKKIFEGIACNINSI 1322
W+AT W IW RN IF+G+ +++S+
Sbjct: 1439 WLATSWNIWKFRNLVIFKGVLPDVSSV 1465
>gb|PNX89544.1| ribonuclease H, partial [Trifolium pratense]
Length = 404
Score = 298 bits (762), Expect = 8e-94
Identities = 151/343 (44%), Positives = 211/343 (61%), Gaps = 5/343 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
FLG+ VGANPRR TW+PV+ + +LS W G+ LSIGGR+TLINSVLSSLPLY+FSF+K
Sbjct: 64 FLGLPVGANPRRLNTWKPVVESMLKRLSGWNGRHLSIGGRVTLINSVLSSLPLYFFSFFK 123
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
PK V+++L+++QR FLWGG +K+ WV W+ +CLPK +GGLG+K+L FN ALLSKW
Sbjct: 124 APKGVIHQLVKIQRNFLWGGGLDDKKLCWVKWEHVCLPKEKGGLGVKDLSLFNQALLSKW 183
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDENWF 542
RW+C+V +++W+++L +Y N R S SIWWRD+ +G E G E WF
Sbjct: 184 RWRCIVDINAVWYELLRHRYENNFRNLLSWDGASSSPKDSIWWRDVLKVG-ELDG-ELWF 241
Query: 543 KRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKH--GVWNNGMWRW 716
+ +G G + FWK+ WCG PF LFP+L+D ++N VV G+ +N W+W
Sbjct: 242 PKCVSSVLGDGKMIGFWKEKWCGEVPFRLLFPNLFDKEFDQNVVVADRLVGINSNRHWQW 301
Query: 717 NIIVDGDTTNLNDLQV---ILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAGT 887
D T DLQ IL V++ +D+W W FTVK YS+ ++
Sbjct: 302 AWSSDLTTYEEEDLQALQQILLAVSMGAESEDKWRWIPEKSGIFTVKSVYSFFLSGRVMH 361
Query: 888 QFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRR 1016
++ A LW+ ++P+K V WRL +++LPTR AL R
Sbjct: 362 DVNPGVLPALKSLWENDIPSKVGVFGWRLLLEKLPTRAALASR 404
>dbj|GAU26515.1| hypothetical protein TSUD_361480 [Trifolium subterraneum]
Length = 873
Score = 306 bits (783), Expect = 6e-92
Identities = 156/440 (35%), Positives = 243/440 (55%), Gaps = 10/440 (2%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ VGANPRRC+TW+P++ +++ +L +W + +S+GGRI LIN VL+++P++Y S +K
Sbjct: 395 YLGLPVGANPRRCSTWDPLVERLRKRLRAWGNRYVSLGGRIVLINFVLNAIPIFYLSLFK 454
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+P V+ ++IR+QR FLWGG + RKI+WV WK +C P+ QGGLG++++ N++LL KW
Sbjct: 455 MPVLVIKKIIRIQREFLWGGVKGGRKISWVKWKEVCKPRCQGGLGVRDVGKVNLSLLIKW 514
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSR----WRDGRISHYSMRNASIWWRDISVLGNEFSGD 530
RW+ L + W ++L++KYG + R W D I AS WW+DI + + +
Sbjct: 515 RWRLLQPEGAFWKELLVAKYGEMVRQKLHWNDCPIP----SRASSWWKDICEI--DVCEE 568
Query: 531 ENWFKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNG-- 704
+WF + RVG+GD + FWKD W G SP C LFP L+ +K +V + V G
Sbjct: 569 GSWFAQHVFRRVGKGDSIRFWKDCWFGNSPLCDLFPRLFSIATHKEALVNEVRVVTEGLN 628
Query: 705 MWRW---NIIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNF 875
+W W + + L L L + L ++D W W + + FTVK Y+ L +
Sbjct: 629 LWNWEWRRRLFVWEQELLVSLTETLPLLVLS-GEEDVWYWRLEDGGVFTVKSVYTLLGSV 687
Query: 876 YA-GTQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCV 1052
+A + + ++WK+ P+K V W+L +R+PT+ L RG+ G CV
Sbjct: 688 FATDAVWSPPELRVFDQIWKSPAPSKVIVFPWKLLRNRIPTKANLALRGIQVVGGSLNCV 747
Query: 1053 CCLREEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLK 1232
C+ E A+HLF CN W I W GV + + + F K+ +
Sbjct: 748 HCVGSGEDASHLFMYCNFAAQVWNSIFRWIGVTIVIPPNIFLLFDCMRGAAPNNKIAKGF 807
Query: 1233 FVLWIATIWAIWHARNKKIF 1292
++W T+W IW +RN F
Sbjct: 808 SLIWHTTLWVIWKSRNSISF 827
>dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subterraneum]
Length = 1985
Score = 314 bits (804), Expect = 1e-91
Identities = 153/444 (34%), Positives = 250/444 (56%), Gaps = 7/444 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ VGANPRR +TW+P++ +K +L SW K +S+GGRI +IN+VLSS+P+++ S+ K
Sbjct: 1510 YLGLPVGANPRRYSTWQPMVEGIKRRLRSWGNKYISLGGRIVMINAVLSSIPIFFLSYMK 1569
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+P V E++ LQR FLWGG R+I WV W IC PK +GGL I++L N++LL+KW
Sbjct: 1570 MPLMVWKEIVTLQRNFLWGGLSKRRRICWVKWAEICKPKKEGGLSIRDLRTVNLSLLAKW 1629
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRN-ASIWWRDISVLGNEFSGDENW 539
RWK L + +W V+++KYG + + R+ + + +S+WWRD+ L W
Sbjct: 1630 RWKLLSEEEEVWKNVIIAKYG-IHMLGNARLDERDIGSMSSLWWRDLCRLDK----GVGW 1684
Query: 540 FKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRW- 716
F +G G+ + FWK+ W G FP L+ + ++D+V++ G W NG+WRW
Sbjct: 1685 FNHFARKYLGCGNSIKFWKEVWVGGQSLELQFPRLFGISVQQDDMVREVGSWVNGVWRWG 1744
Query: 717 ----NIIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
++ + +++L+++L ++++ ++D WVW + FTVK Y L
Sbjct: 1745 LRWRRVLFVWEEDLVSELELVLNNISIT-EEEDRWVWRLNVGDGFTVKSLYEALDPLLTP 1803
Query: 885 TQFGAEIVA-ACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCL 1061
+ + A +WK+ VP+K L W+LF+DR+PT+ L +RG++ CV C
Sbjct: 1804 RCLVSSFESFAYRSIWKSAVPSKVSALAWQLFLDRIPTKVNLYKRGILRMD-HASCVLCG 1862
Query: 1062 REEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFVL 1241
E E A HLF C+ W + W GV + D +M + +K+++ ++
Sbjct: 1863 EEAETARHLFLHCDYAAGIWYAVCRWLGVFAVLPADVMMSYGLLVGCGRNKKIRKGFAIV 1922
Query: 1242 WIATIWAIWHARNKKIFEGIACNI 1313
W+A IW IW RN+++F+ +
Sbjct: 1923 WMAFIWVIWKVRNERVFKNATVEV 1946
>dbj|GAU38148.1| hypothetical protein TSUD_395930 [Trifolium subterraneum]
Length = 503
Score = 294 bits (752), Expect = 4e-91
Identities = 154/439 (35%), Positives = 229/439 (52%), Gaps = 9/439 (2%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ VGANPR+ +TWEP+LN +K +L +W K +S+GGRI LIN+V++++P++Y S+ K
Sbjct: 28 YLGLPVGANPRKLSTWEPMLNVIKGRLCAWGNKYVSLGGRIVLINAVMNAIPIFYLSYMK 87
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+P KV EL++LQR FLW G K WV W IC PK +GGLG+++L NI+LL+KW
Sbjct: 88 MPLKVWRELVKLQRVFLWAGLSKQTKTCWVKWDVICKPKKEGGLGVRDLRLVNISLLAKW 147
Query: 363 RWKCLVGGDSLWHQVLLSKYGN--LSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDEN 536
RWK L +W +V+ ++YG + + G I R S WWRD+ +L D
Sbjct: 148 RWKLLTTECEVWKEVVGARYGRDVIGKVNLGDID--VTRTGSCWWRDLCLL----DSDVR 201
Query: 537 WFKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRW 716
WF RVGRGD +FW + W G P Q FP L+ +N+V+ G NG+W W
Sbjct: 202 WFSSAVGKRVGRGDSTMFWNEIWIGDQPLRQRFPRLFGMSTQQNEVICNMGSLVNGLWHW 261
Query: 717 ------NIIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFY 878
N + + L +I++ + D W+W + +T YS ++N
Sbjct: 262 ELQWRRNFFTWEEDQYNHFLDIIVQFAPTV--QQDRWLWLGDGVQGYTANSAYSLVVNKL 319
Query: 879 AGTQFGAEIVAACVK-LWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVC 1055
I K LWK P+K W+L +DRL T+D L++R +I CV
Sbjct: 320 VTPSVCDPINDLVFKILWKCGAPSKVSAFSWQLMLDRLQTKDNLMKRRII-QAHHGNCVF 378
Query: 1056 CLREEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKF 1235
C +E A+HLF C+R W ++ W G+ + + V +K +
Sbjct: 379 CNLAQESASHLFLHCDRVAKVWYDLMRWLGLTVILPHNIVSSLAILVTCANNKKERAGLC 438
Query: 1236 VLWIATIWAIWHARNKKIF 1292
++W A +W IW RN +F
Sbjct: 439 LIWNAYMWVIWTVRNVCVF 457
>gb|KYP78141.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 492
Score = 293 bits (750), Expect = 6e-91
Identities = 152/438 (34%), Positives = 230/438 (52%), Gaps = 6/438 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LGI +GANPRR W+ ++ K KL+ WR K LS+ R+ LIN VLS LPLY S +K
Sbjct: 18 YLGIAIGANPRRQKMWKEIMLKYNRKLALWRSKNLSLAARVCLINFVLSGLPLYLISLFK 77
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+PK+V+ +L ++QR FLWG + RKI+WV +TIC PK +GGLGIKN+E+FN ALL KW
Sbjct: 78 MPKQVMRQLEKIQRNFLWGSKDETRKISWVKRRTICQPKEKGGLGIKNIESFNDALLEKW 137
Query: 363 RWKCLVGGDSLWHQVLLSKYGNLSRWRDGRISHYSMRNASIWWRDIS-VLGNEFSGDENW 539
+W+ DS+W ++LLSKY W+ + +N+SIWW+D++ V G + E W
Sbjct: 138 KWQLFHQEDSMWGRLLLSKYDG---WQ-SLLKEAGHQNSSIWWQDLTRVCGVQTR--EKW 191
Query: 540 FKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRWN 719
F R+G G K FW D+W G + ++FP L+ K +++ + G W WRW+
Sbjct: 192 FDAAVEWRLGGGKKTRFWHDTWIGNTTLAEVFPRLFLNSKQKMNLIMELGSWIGEDWRWD 251
Query: 720 I-----IVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
+ + + +LQ +L N+ D W W+ Q++V Y+ + +
Sbjct: 252 LKWRRGWFEREVGQWEELQRMLEGRKPKKNEKDFWWWTCEANGQYSVSSAYTLIHSQSYL 311
Query: 885 TQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCCLR 1064
+ LWK +P KA VL W++F + LPT + L RR + P C C +
Sbjct: 312 ASTNQPMTEFFSSLWKLKIPPKAVVLCWKVFHNGLPTTENLTRRNIALPVDSQTCTMCDK 371
Query: 1065 EEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFVLW 1244
E E H+ F C + W+ WA ++ + HF + ++ V+W
Sbjct: 372 EMETMVHIIFTCIEVQKIWKSCYQWASISTVLPQSVHHHFLQQPHSRWSKEEGGRWKVVW 431
Query: 1245 IATIWAIWHARNKKIFEG 1298
+W +W+ RN F G
Sbjct: 432 CVIVWCVWNMRNNCRFRG 449
>gb|PNX95738.1| ribonuclease H, partial [Trifolium pratense]
Length = 1375
Score = 308 bits (789), Expect = 4e-90
Identities = 152/448 (33%), Positives = 239/448 (53%), Gaps = 8/448 (1%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ +GANPR TWEP+L++++ +L SW K +S+GGRI ++NSVL+S+P+++ SF K
Sbjct: 896 YLGLPIGANPRSILTWEPLLDRLRKRLKSWGNKFISLGGRIVMLNSVLNSMPIFFMSFLK 955
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
+PKKV ++++QR FLWGG +KI+WV WK +C K +GGLG+K++ N++LL+KW
Sbjct: 956 MPKKVCKMVVQIQREFLWGGVRGGKKISWVKWKVVCQDKRRGGLGVKDVNLMNLSLLAKW 1015
Query: 363 RWKCLVGGDSLWHQVLLSKYG-NLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDENW 539
RW+ L G SLW ++L++KYG + D Y NAS WW+D+ L + + W
Sbjct: 1016 RWRILQSGPSLWKEILITKYGETIKSCLDLERGRYP-SNASRWWKDLCSLDSVVE-SKKW 1073
Query: 540 FKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWRWN 719
+VG G+ FW D W G S LFP L+ ++K +V G NG W+WN
Sbjct: 1074 LAESISRKVGNGETTSFWLDKWVGNSTLASLFPRLFSISIDKQSMVSDLGECVNGAWQWN 1133
Query: 720 I-----IVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNFYAG 884
+ I + + + L +L L N D WVW G F+V+ Y ++
Sbjct: 1134 LIWRRRIFEWEKELVEQLFQLLHTAVLSENSDC-WVWKPGEGGSFSVRSAY-LVLEEELS 1191
Query: 885 TQFGAEI--VAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAETRCVCC 1058
Q ++ +LW + P+K W+L ++ +PTR L RGV+ C C
Sbjct: 1192 VQVNCDVQETRTLHQLWSSPAPSKVIAFSWKLLLNSIPTRQNLAHRGVLQQTDSKLCAIC 1251
Query: 1059 LREEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLKRLKFV 1238
+ +E + HLF C+ W I W G+ + + F F +G+K +++ +
Sbjct: 1252 VGVDESSVHLFLHCDFASCIWYEIFRWLGLVIVLPANLFQCFDSFIGAAVGKKCRKMFRM 1311
Query: 1239 LWIATIWAIWHARNKKIFEGIACNINSI 1322
+W +W IW RN IF + +N +
Sbjct: 1312 IWHTIVWLIWKNRNDVIFSNSSKEVNEV 1339
>dbj|GAU27449.1| hypothetical protein TSUD_161350 [Trifolium subterraneum]
Length = 513
Score = 291 bits (746), Expect = 5e-90
Identities = 156/454 (34%), Positives = 232/454 (51%), Gaps = 14/454 (3%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ +G +PRR + WEPVL ++K +LS W+ + LS GGR+ L+ SVL+SLP+Y SF+K
Sbjct: 41 YLGLPIGGDPRRLSFWEPVLARLKSRLSGWKSRFLSFGGRLVLLKSVLTSLPVYALSFFK 100
Query: 183 VPKKVLNELIRLQRAFLWGGD-EAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSK 359
P ++ + L F WGG E RK++WV W ++CL K GGLG++ L FN+ALL K
Sbjct: 101 APSGTISSIETLLIKFFWGGGCEESRKVSWVCWDSVCLRKEYGGLGVRQLREFNLALLGK 160
Query: 360 WRWKCLVGGDSLWHQVLLSKYG-NLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGDEN 536
W W+ LV + LW +VL ++YG R RDG R S WWR+I+ + G+
Sbjct: 161 WCWRMLVDREGLWFRVLAARYGVEGGRLRDGG------RRGSSWWREIARIREGGEGEGR 214
Query: 537 WFKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNK-NDVVQKHGV------- 692
WF RVG G LFW D W P C+ F LYD NK V + + +
Sbjct: 215 WFGEHVSRRVGDGSDTLFWIDHWVDGVPLCERFGRLYDLAENKLRTVAEMYSLGWRVDGE 274
Query: 693 ---WNNGMWRWNIIVDGDTTNLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSW 863
W +W W + L + Q + +++L + D W W +TV+ Y
Sbjct: 275 AWEWRRPLWVW------EEEMLGECQSLFANLSLQTHSSDRWQWQPDPDAGYTVRSAYQL 328
Query: 864 LMNFYAGTQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRRGVITPGAET 1043
L + T A + +W + VP K V WRL DRLPT+ LV +++P A
Sbjct: 329 LTSHTVDTTDEATHL-----IWHSQVPLKVSVFAWRLLRDRLPTKANLVTPCILSPTAHF 383
Query: 1044 RCVCCLREEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFGQQLMGRKLK 1223
CV E A+HLF C W + +W G++ ++ T HF +F G + +
Sbjct: 384 -CVSGCGATETAHHLFIACGTFGSLWALVCSWIGISLVDSTSLREHFVQFIHLAGGSRAR 442
Query: 1224 R-LKFVLWIATIWAIWHARNKKIFEGIACNINSI 1322
R ++W+A +W +W RN ++F G C+ + +
Sbjct: 443 RSFLQLIWLACVWVVWTERNHRLFRGSVCSSHQL 476
>dbj|GAU47706.1| hypothetical protein TSUD_177110 [Trifolium subterraneum]
Length = 999
Score = 303 bits (775), Expect = 7e-90
Identities = 164/457 (35%), Positives = 245/457 (53%), Gaps = 24/457 (5%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
+LG+ VGAN R TWEPV+ +K +L SWR + +S+GGR+ LINSVL+S+P++Y SF K
Sbjct: 543 YLGLPVGANLRHAKTWEPVIKTIKNRLFSWRNRYVSLGGRVILINSVLASIPVFYLSFLK 602
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHR-KIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSK 359
+P KV ++R+Q+ FLWGG + + KIAWVSWK +C PK +GGLG+++L+ FN++L++K
Sbjct: 603 MPVKVRMSIVRMQKNFLWGGTSSDKNKIAWVSWKDVCRPKGEGGLGVRDLKWFNLSLMAK 662
Query: 360 WRWKCLVGGDSLWHQVLLSKYGNLSR--WRDGRISHYSMRNASIWWRDISVLGNEFSGDE 533
W W+ L+ LW VL +KYG + R GR +H+ S+WW+D+ LG G
Sbjct: 663 WWWRLLMEEGPLWRNVLDAKYGGVGRANLSIGRGNHF-----SLWWKDLVGLGTRSGGVV 717
Query: 534 NWFKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMWR 713
+W + + ++G G FW D W G P C FP LY+ L ++ G W N +W
Sbjct: 718 DWTQDIFSKKLGCGGSTSFWLDRWVGIVPLCVSFPRLYNLSLQPALKIKDMGEWVNEIWC 777
Query: 714 W-----------------NIIVDGDTTNLNDLQVILRDVTLCWNKD-DEWVWSIGNKKQF 839
W ++ L + I+R+ L K+ D W + +G+ F
Sbjct: 778 WKLKWRRSFFVWEESLYAELLAIICCAELIAIIAIMRNYLLSITKEVDSWSFMLGD--LF 835
Query: 840 TVKECYSWLMN-FYAGTQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRR 1016
+V Y +L N F ++ G V K+W + P K V W+ + RLPT++ LV+R
Sbjct: 836 SVSAFYMYLYNKFLPPSRVGLNSVNTIAKVWDSWAPNKVVVFSWQALLGRLPTKENLVKR 895
Query: 1017 GVITPGAETRCVCCLREEECANHLFFGCNRTKYAWRRILAWAGVADLNETDAVMHFCRFG 1196
G+ G CV C E +HLF C+ T W ++ W G+ + F F
Sbjct: 896 GISLEGTMVGCVMCGGGRESEDHLFAACSTTWEVWSKVHRWFGLTTVIPGTIGSLFQGFL 955
Query: 1197 QQLMGRK--LKRLKFVLWIATIWAIWHARNKKIFEGI 1301
RK LK + V W A +W IW +RN++IF G+
Sbjct: 956 PNFRSRKHALKGINLV-WHAVMWVIWQSRNERIFRGV 991
>gb|PNX79011.1| ribonuclease H, partial [Trifolium pratense]
Length = 497
Score = 290 bits (742), Expect = 1e-89
Identities = 141/347 (40%), Positives = 207/347 (59%), Gaps = 9/347 (2%)
Frame = +3
Query: 3 FLGIQVGANPRRCTTWEPVLNKVKLKLSSWRGKQLSIGGRITLINSVLSSLPLYYFSFYK 182
FLG+ VGANPRR TW+PV+ + +LS W G+ LSIGGR+ LINSVLSSLPLY++SF++
Sbjct: 157 FLGLPVGANPRRLETWKPVVESMMRRLSGWNGRHLSIGGRVMLINSVLSSLPLYFYSFFR 216
Query: 183 VPKKVLNELIRLQRAFLWGGDEAHRKIAWVSWKTICLPKSQGGLGIKNLEAFNIALLSKW 362
PK ++ +L++LQR FLWGG +K+ WV W+ +CLPK +GGLG+K L+ FN ALLSKW
Sbjct: 217 APKGIIRKLVKLQRNFLWGGGLEDKKLCWVKWEHVCLPKEKGGLGVKTLDLFNQALLSKW 276
Query: 363 RWKCLVGGDSLWHQVLLSKY----GNLSRWRDGRISHYSMRNASIWWRDISVLGNEFSGD 530
+W+C+ D+LW +L +Y NL W + + SIWWRD++ +G+ + D
Sbjct: 277 KWRCVNEPDALWTDLLKFRYEVSFDNLLSWETIKTGTFD----SIWWRDVARVGD--TAD 330
Query: 531 ENWFKRVTHLRVGRGDKVLFWKDSWCGTSPFCQLFPDLYDACLNKNDVVQKHGVWNNGMW 710
+ WF + +G G + FWK+ W G P +L+P+L+ KN VV N
Sbjct: 331 DCWFPKNVSCGLGDGKSISFWKEKWIGEVPLMELYPNLFAIECFKNVVVADRFPDNGHNQ 390
Query: 711 RWNIIVDGDTT-----NLNDLQVILRDVTLCWNKDDEWVWSIGNKKQFTVKECYSWLMNF 875
WN+ D + + +LQ++L + L + D+W W G + F+VK Y L N
Sbjct: 391 EWNLFWSMDLSEFEMKEVEELQILLNGIMLTGDVGDKWRWIPGEEGNFSVKSTYMLLQNE 450
Query: 876 YAGTQFGAEIVAACVKLWKTNVPTKAKVLVWRLFIDRLPTRDALVRR 1016
A +++ A KLWK ++P+K V WRL + +LPTR +L +
Sbjct: 451 RAAMNIQTQLLEALHKLWKNDIPSKVGVFGWRLLLMKLPTRVSLASK 497