BLASTX nr result

ID: Astragalus23_contig00006332 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00006332
         (585 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613355.1| transmembrane protein, putative [Medicago tr...    59   2e-08

>ref|XP_003613355.1| transmembrane protein, putative [Medicago truncatula]
 gb|AES96313.1| transmembrane protein, putative [Medicago truncatula]
          Length = 65

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 39/66 (59%)
 Frame = +3

Query: 108 MASRVKFSLAALLFIVLAMVVAAHEGHDHSNLXXXXXXXXXXXXLNYPTVIGGFVSFLVT 287
           MAS++KFSL  +   VLAMVVA H+GH HS              LN  +VIGGFV  L+ 
Sbjct: 1   MASQIKFSLFTIFIFVLAMVVAGHDGHVHS---PAEAPSSFASSLNCHSVIGGFVPILIA 57

Query: 288 FLFARN 305
            LFARN
Sbjct: 58  ILFARN 63


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