BLASTX nr result

ID: Astragalus23_contig00005818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00005818
         (725 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004511979.1| PREDICTED: nuclear pore complex protein NUP5...    58   4e-06

>ref|XP_004511979.1| PREDICTED: nuclear pore complex protein NUP58 [Cicer arietinum]
          Length = 493

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 32/55 (58%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
 Frame = +3

Query: 3   FATPTTPAPG-SWFG---ATPQTSLFGXXXXXXXXXXXXXXXFSNSTPMFSSTPA 155
           F TPTTPAPG SWF    ATPQTSLFG               FSN+TP+FSSTPA
Sbjct: 402 FTTPTTPAPGASWFASSSATPQTSLFGSASSSLPGATSTPSLFSNATPLFSSTPA 456


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