BLASTX nr result

ID: Astragalus23_contig00000396 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00000396
         (315 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004499312.1| PREDICTED: thioredoxin-like protein CDSP32, ...    54   6e-06

>ref|XP_004499312.1| PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Cicer
           arietinum]
          Length = 324

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 38/86 (44%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
 Frame = +1

Query: 73  NLLCKPLIPLSTTQLPPNFLPL--IVSSLPNFQTKIHSPGSPIGLKVRVGGASSRRFIXX 246
           N +CKP IP  +  + P FLPL  + SSLPNF TK HS    +         + RRFI  
Sbjct: 28  NFICKPPIPAPS--IHPKFLPLHSLSSSLPNFHTKNHSSHMRVS-----SHENQRRFITK 80

Query: 247 XXXXXXXXXX---DERVQRVHSIEEF 315
                        DERVQRVHSIEEF
Sbjct: 81  ATAASDAKRKEKSDERVQRVHSIEEF 106


Top