BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00038252
         (555 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]   179   3e-51
gb|PNX69701.1| copia-type polyprotein, partial [Trifolium pratense]   173   4e-51
gb|KYP38785.1| Retrovirus-related Pol polyprotein from transposo...   172   7e-50
gb|PNX81686.1| retrotransposon-related protein, partial [Trifoli...   171   1e-49
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   181   2e-49
dbj|GAU51371.1| hypothetical protein TSUD_247260 [Trifolium subt...   181   2e-49
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   181   3e-49
gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense]   179   1e-48
gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]   179   1e-48
emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]   178   2e-48
gb|PRQ21321.1| putative RNA-directed DNA polymerase [Rosa chinen...   178   2e-48
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]   176   1e-47
dbj|GAU31045.1| hypothetical protein TSUD_214810 [Trifolium subt...   172   4e-46
dbj|GAU15733.1| hypothetical protein TSUD_235460 [Trifolium subt...   171   1e-45
gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposo...   170   1e-45
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen...   170   2e-45
gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   170   2e-45
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   169   5e-45
gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposo...   164   1e-44
dbj|GAU43961.1| hypothetical protein TSUD_283880 [Trifolium subt...   167   2e-44

>gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 415

 Score =  179 bits (453), Expect = 3e-51
 Identities = 96/186 (51%), Positives = 128/186 (68%), Gaps = 7/186 (3%)
 Frame = -1

Query: 537 ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDL-DWGEAEDMTSSNE 361
           ISDESK YR++DP  ++IV+S+DV+FEE+  WDWE S + ++K DL DWGE+E+  + N 
Sbjct: 145 ISDESKAYRLFDPTTKRIVISKDVIFEENECWDWERSPE-QMKPDLLDWGESEEERNENT 203

Query: 360 ENPTECDIPAPTETVASSSNAD-----RNPPSWLNDYAIGEELTDDDEIANIVM-NENSD 199
           E   E      + +  SS  A      R PP W+ DY  GEE +++ EI N+VM    SD
Sbjct: 204 EEVRE---GMGSSSSLSSEEAPIEGRVRRPPGWMQDYTSGEEFSEE-EIQNLVMFTVASD 259

Query: 198 PNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWIYKTKLNELGEVDK 19
           P  +EEA K EKWR AM++E+ +I +N T +LT+LP GAK IG+KWI+KTKLNE GEV+K
Sbjct: 260 PTTFEEAVKSEKWRNAMNNEMEAIEKNNTWELTDLPTGAKTIGLKWIFKTKLNENGEVEK 319

Query: 18  YKARLV 1
           YKARLV
Sbjct: 320 YKARLV 325


>gb|PNX69701.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 231

 Score =  173 bits (438), Expect = 4e-51
 Identities = 93/199 (46%), Positives = 126/199 (63%), Gaps = 20/199 (10%)
 Frame = -1

Query: 537 ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDW-ESSHKIELKLDLDWGEAEDMTSSNE 361
           +S+ESK Y++YDP+ +KI++SRDVVF+E   W W E+S K E++L +D  +AED   S +
Sbjct: 10  VSEESKAYKLYDPVQKKIIISRDVVFDEKQGWRWNETSDKKEIEL-ID-NDAED---SVQ 64

Query: 360 ENPTECDIPAPTETVASSSNAD------------------RNPPSWLNDYAIGEELTDDD 235
             P E D       V S S+ D                  R PP W+ DY  G EL +++
Sbjct: 65  AEPAEVDPVTTEPAVQSDSDMDTTSEENYDNTEDGVGQRARRPPGWMRDYVTGSELQEEE 124

Query: 234 EIANI-VMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWI 58
           ++ N+ V + N DP C+EEA K   WR+AMD EI SI +NGT +LT+LP G KKIGVKW+
Sbjct: 125 QLQNLAVFSNNEDPTCFEEAVKLAVWREAMDQEIESIERNGTWELTDLPQGMKKIGVKWV 184

Query: 57  YKTKLNELGEVDKYKARLV 1
           +KTK NE G+V+KYKARLV
Sbjct: 185 FKTKYNEQGKVEKYKARLV 203


>gb|KYP38785.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 292

 Score =  172 bits (435), Expect = 7e-50
 Identities = 91/199 (45%), Positives = 129/199 (64%), Gaps = 16/199 (8%)
 Frame = -1

Query: 549 LFCCISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGEAEDMTS 370
           +F  +S+ESK YR++DP A+KIV+SRDVVF+ED  W+W+  +  ++ ++L  G+ ED+T 
Sbjct: 87  VFFGVSEESKAYRLFDPRAKKIVISRDVVFDEDKPWNWDKIYDEQVPVNLKCGDNEDITI 146

Query: 369 SNEEN---PTECDIPAPTETVASSSNAD-------------RNPPSWLNDYAIGEELTDD 238
            ++EN     E +     E   +SSN++             R  P W+ DY  GE   ++
Sbjct: 147 MHDENNEVENEENEEVTKEMGVNSSNSENIVVSSDTNEARIRRTPVWMRDYICGESRLEE 206

Query: 237 DEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWI 58
           +  AN+ M   +DP  +EEA K EKWR  MDSE+++I +N T +LTELP GAKKIGV+W+
Sbjct: 207 EVEANLTMFIPADPIYFEEAMKYEKWRATMDSEMDAIERNDTWQLTELPAGAKKIGVRWV 266

Query: 57  YKTKLNELGEVDKYKARLV 1
           YKTKL E GEVDK+KARLV
Sbjct: 267 YKTKLKENGEVDKHKARLV 285


>gb|PNX81686.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 288

 Score =  171 bits (433), Expect = 1e-49
 Identities = 88/190 (46%), Positives = 124/190 (65%), Gaps = 11/190 (5%)
 Frame = -1

Query: 537 ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWG--EAEDMTSSN 364
           +S+ESKGYR++DP+A+K+VVSRDV+FEE+  WDW     +   LDL+WG  + E++   N
Sbjct: 68  VSEESKGYRLFDPVAKKVVVSRDVIFEEEKKWDWNEKQTV---LDLEWGGVDNEEIXCEN 124

Query: 363 E-ENPTECDIPAPTETVASSSNAD--------RNPPSWLNDYAIGEELTDDDEIANIVMN 211
           E E   + DI    +     +  D        R PP+W++D+  GE L+DD+  A++ + 
Sbjct: 125 ENEEIIDRDIEETRDEGVGETGDDYSDGEERVRRPPAWMDDFVSGEGLSDDE--AHLALM 182

Query: 210 ENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWIYKTKLNELG 31
            ++DP C+EEA K + W+ AMD+EI SI +N T  L E P G K IGVKW+YKTK NE G
Sbjct: 183 VSTDPLCFEEAVKSKNWKLAMDNEIKSIEKNHTWTLIEPPVGVKIIGVKWVYKTKYNEHG 242

Query: 30  EVDKYKARLV 1
           ++DKYKARLV
Sbjct: 243 KIDKYKARLV 252


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  181 bits (459), Expect = 2e-49
 Identities = 95/207 (45%), Positives = 125/207 (60%), Gaps = 29/207 (14%)
 Frame = -1

Query: 534  SDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWG------------ 391
            SDESKGY++YDP+A+ +V SRD+VFEE+  W+W++S++ ++ +DL+WG            
Sbjct: 610  SDESKGYKLYDPVAKNVVTSRDIVFEENRQWEWDTSYEEQVLVDLEWGDDDKNDTEDNEG 669

Query: 390  --------EAEDMTSSNEENPTECDIPAPTETVASSSNAD---------RNPPSWLNDYA 262
                    E  +    NE      D    T T AS + A+         R  P W+ DY 
Sbjct: 670  DENLEAASEGNEEAEGNENQAAANDAGDATATDASDAPAEGSDAMERKVRRAPIWMEDYI 729

Query: 261  IGEELTDDDEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGA 82
             G+ L++ +   N+ +  ++DP  YEE     KWR AMDSEINSI +N T KLT+LP GA
Sbjct: 730  SGKGLSEGEIELNMALVASTDPINYEEVVMSSKWRLAMDSEINSIEKNQTWKLTDLPTGA 789

Query: 81   KKIGVKWIYKTKLNELGEVDKYKARLV 1
            K IGVKWIYKTKLNELGEVDKYKARLV
Sbjct: 790  KTIGVKWIYKTKLNELGEVDKYKARLV 816


>dbj|GAU51371.1| hypothetical protein TSUD_247260 [Trifolium subterraneum]
          Length = 1980

 Score =  181 bits (459), Expect = 2e-49
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 21/202 (10%)
 Frame = -1

Query: 543  CCI----SDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGE--AE 382
            CC+    S+ESK YR+YDP +++I++SRDVVFEED  W+WE   + + K D +W +  +E
Sbjct: 684  CCVLFGVSEESKAYRLYDPTSKRIIISRDVVFEEDGQWNWEKKSEEDNKFDTEWEDEKSE 743

Query: 381  DMTSSNEENPTECDIPAPTETVASSSNADRNP------------PSWLNDYAIGEELTDD 238
            +   S++ N  E       +  A+  N D N             P W+NDY  GE L+D+
Sbjct: 744  EREESSDGNEEENATDGNEDENATDGNEDENTASPVTEHRNRRAPGWVNDYVSGEGLSDE 803

Query: 237  DEIANIVMNEN---SDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGV 67
            +    +V+  +   SDP  ++EA K+ KWR AMD+E+ SI +NGT  LTELP  A+KIGV
Sbjct: 804  EVQTQLVLFAHAVHSDPTSFDEAVKEVKWRAAMDAEMKSIEKNGTWDLTELPKEARKIGV 863

Query: 66   KWIYKTKLNELGEVDKYKARLV 1
            KW+YKTKLNELGEV+KYKARLV
Sbjct: 864  KWVYKTKLNELGEVEKYKARLV 885



 Score =  171 bits (432), Expect = 1e-45
 Identities = 89/204 (43%), Positives = 122/204 (59%), Gaps = 26/204 (12%)
 Frame = -1

Query: 534  SDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGE--AEDMTSSNE 361
            ++E K YR+YDP +++I++SRDVVFEED  W+WE   + +   D +W +  +E+   S++
Sbjct: 954  NEEHKAYRLYDPTSKRIIISRDVVFEEDGQWNWEKKSEEDNNFDTEWEDEKSEEREESSD 1013

Query: 360  ENPTECDIPAPTETVASSSNADRNP---------------------PSWLNDYAIGEELT 244
             N  E       E  A+  N D N                      P W NDY  GE L+
Sbjct: 1014 VNEEENAAEGNEEENATDGNEDENATDGNEDENTASPVTEHRNRRAPGWTNDYVSGEGLS 1073

Query: 243  DDDEIANIVMNEN---SDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKI 73
            D++    +V+  +   SDP  ++EA K+ KWR AMD+E+ SI +NGT  LTELP  A+KI
Sbjct: 1074 DEEVQTQLVLFAHAVHSDPTSFDEAVKEVKWRAAMDAEMKSIEKNGTWDLTELPKEARKI 1133

Query: 72   GVKWIYKTKLNELGEVDKYKARLV 1
            GVKW+YKTKLNELGEV+KYKARLV
Sbjct: 1134 GVKWVYKTKLNELGEVEKYKARLV 1157


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  181 bits (458), Expect = 3e-49
 Identities = 90/202 (44%), Positives = 128/202 (63%), Gaps = 23/202 (11%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGEAEDMTSSNEE 358
            +S+ESK YR++DPI+QKI++SRDVVFEED  W W++SH+  +  DL+W   E+  + ++ 
Sbjct: 445  VSEESKAYRLFDPISQKIIISRDVVFEEDQQWKWDNSHEPAILADLEWESDEETDTEDDG 504

Query: 357  NPTECDIPAPTETVASSSNAD---------------------RNPPSWLNDYAIGEELTD 241
            N  E   P   E + +S + D                     R PP+W+ DY  G  L+D
Sbjct: 505  NEEE---PEAGEDMGNSESNDSDSFENGETTYEDSTPHEGRTRRPPTWMQDYETGAGLSD 561

Query: 240  DDEI--ANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGV 67
            ++ +  A + +  +SDP  Y++A + EKWR AM+ EI +I +N T +LT+LP+G K IGV
Sbjct: 562  EESVNLAQLALFTDSDPTTYDDAVRSEKWRLAMNQEIEAIERNNTWELTDLPSGGKTIGV 621

Query: 66   KWIYKTKLNELGEVDKYKARLV 1
            KWI+KTKLNE GEVDKYKARLV
Sbjct: 622  KWIFKTKLNENGEVDKYKARLV 643


>gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1017

 Score =  179 bits (454), Expect = 1e-48
 Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 30/211 (14%)
 Frame = -1

Query: 543  CCI----SDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWG----- 391
            CC+    S+ESK YR+YDP +++I++SRDVVFEED  W+WE   + +   D +W      
Sbjct: 380  CCVLFGVSEESKAYRLYDPTSKRIIISRDVVFEEDGQWNWEKRSEEDNTFDTEWEDEKSE 439

Query: 390  EAEDMTSSNEE------NPTECDIPAPTETVASSSNADRNP------------PSWLNDY 265
            E E+ T  NEE      N  E       E  A+  N D N             P W+NDY
Sbjct: 440  EREESTDGNEEENATDSNEEENAAEGNEEENATDGNEDENAASPVSEHRNRRAPGWMNDY 499

Query: 264  AIGEELTDDDEIANIVMNEN---SDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTEL 94
              GE L+D++    +V+  +   SDP  ++EA K+ KWR AMD+E+ SI +NGT  LTEL
Sbjct: 500  VSGEGLSDEEVQTQLVLFAHAVHSDPTSFDEAVKEVKWRAAMDAEMKSIEKNGTWDLTEL 559

Query: 93   PNGAKKIGVKWIYKTKLNELGEVDKYKARLV 1
            P  A+KIGVKW+YKTKLNELGEV+KYKARLV
Sbjct: 560  PKEARKIGVKWVYKTKLNELGEVEKYKARLV 590


>gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1326

 Score =  179 bits (453), Expect = 1e-48
 Identities = 92/199 (46%), Positives = 126/199 (63%), Gaps = 20/199 (10%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDW--GEAEDMTSSN 364
            +S+ESKGYR +DP+++KIVVSRDV+FEED  WDWE    +    DL+W  GE E+  S N
Sbjct: 687  VSEESKGYRFFDPVSKKIVVSRDVIFEEDKQWDWEEKQTVA---DLEWNDGENEERVSEN 743

Query: 363  E------ENPTECDIPAPTETVASSSN------------ADRNPPSWLNDYAIGEELTDD 238
            +      EN  + ++    E +    +             +R PP W++D+  GE L++D
Sbjct: 744  DNEERVSENDNQGNVEKEREVIREEEHDSNEGEEIVKEYRERRPPGWMSDFESGEGLSED 803

Query: 237  DEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWI 58
            +  A++ +  + DP C+EEA K E WR AM+ EI SI +N T  LTELP GAK+IGVKW+
Sbjct: 804  E--AHMALMVSIDPLCFEEAVKSENWRLAMEKEIKSIEKNQTWTLTELPAGAKRIGVKWV 861

Query: 57   YKTKLNELGEVDKYKARLV 1
            YKTK NE G++DKYKARLV
Sbjct: 862  YKTKYNEHGKIDKYKARLV 880


>emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
          Length = 972

 Score =  178 bits (452), Expect = 2e-48
 Identities = 96/207 (46%), Positives = 124/207 (59%), Gaps = 29/207 (14%)
 Frame = -1

Query: 534  SDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWG------------ 391
            SDESKGY++YDP+A+K+V SRD+VFEED  W+W++S++ ++ +DL+WG            
Sbjct: 429  SDESKGYKLYDPVAKKVVTSRDIVFEEDRQWEWDTSYEEQVLVDLEWGDDDKNDTEDNEG 488

Query: 390  --------EAEDMTSSNEENPTECDIPAPTETVASSSNAD---------RNPPSWLNDYA 262
                    E  +    NE      D      T AS + A+         R    W+ DY 
Sbjct: 489  DENLEATNEGNEEAEGNENQAAANDAGDAVATDASDAPAEGSDARERRVRRALIWMEDYI 548

Query: 261  IGEELTDDDEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGA 82
             GE L++ +   N+ +  ++ P  YEEA    KWR AMDSEINSI +N T KLT+LP GA
Sbjct: 549  SGERLSEGEIELNMALVASTYPINYEEAXMSSKWRLAMDSEINSIEKNQTWKLTDLPAGA 608

Query: 81   KKIGVKWIYKTKLNELGEVDKYKARLV 1
            K IGVKWIYKTKLNELGEVDKYKARLV
Sbjct: 609  KTIGVKWIYKTKLNELGEVDKYKARLV 635


>gb|PRQ21321.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1270

 Score =  178 bits (452), Expect = 2e-48
 Identities = 87/192 (45%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
 Frame = -1

Query: 549  LFCCISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGEAEDMTS 370
            +F  +S+ESK YR+++PI +KI++SRDVVF+E++ WDW    + ++ L  D G  +  T+
Sbjct: 689  IFLGVSEESKAYRLFNPITKKIIISRDVVFDEESSWDWNGIGQQQVPLIADEGRVDSETN 748

Query: 369  SNEENPTECDIPA---------PTETVASSSNADRNPPSWLNDYAIGEELTDDDEIANIV 217
               E P E   P          P    +  +  +R  P+W+ DY  G +L DD+ IA++ 
Sbjct: 749  HELEAPNESPSPVAARSPSEVQPVSPRSPRAQRERKRPAWMMDYESGGDLIDDEAIAHLA 808

Query: 216  MNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWIYKTKLNE 37
            +    DP  YEEAAK+ KWR+AMD+E+NSI +N T +LT+LP G + IGVKW+YKTKL +
Sbjct: 809  LFSYCDPITYEEAAKETKWREAMDAEMNSIEKNDTWELTKLPKGQQSIGVKWVYKTKLRQ 868

Query: 36   LGEVDKYKARLV 1
             GEVDKYKARLV
Sbjct: 869  DGEVDKYKARLV 880


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score =  176 bits (447), Expect = 1e-47
 Identities = 94/207 (45%), Positives = 123/207 (59%), Gaps = 28/207 (13%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGEAE-------- 382
            +S+E K YR+YDP++QKI+VSRDV FEE+  WDW  SH+  +  DLDWGE++        
Sbjct: 638  VSEELKAYRLYDPVSQKIIVSRDVKFEEENSWDWNKSHEKPIIADLDWGESDKEAVLVDT 697

Query: 381  --------------------DMTSSNEENPTECDIPAPTETVASSSNADRNPPSWLNDYA 262
                                D   SNEENP       P E         R PP+WL DYA
Sbjct: 698  NRGNFETDHHDITIEAMEGNDSYESNEENPLN-----PNE------GRIRRPPAWLRDYA 746

Query: 261  IGEELTDDDEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGA 82
             G+ L+++++ A   +   +DP  + +A K  KWR+AMD+EI +I +N T +LT+LP  A
Sbjct: 747  SGKGLSEEEDTAYQALFVGNDPVSFGDAVKSMKWRKAMDAEIEAIDRNDTWELTDLPTEA 806

Query: 81   KKIGVKWIYKTKLNELGEVDKYKARLV 1
            KK+GVKWIYKTK NE GEVDKYKARLV
Sbjct: 807  KKVGVKWIYKTKFNENGEVDKYKARLV 833



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -1

Query: 105 LTELPNGAKKIGVKWIYKTKLNELGEVDKYKARLV 1
           L +LP  AKK+GVKWIYKTK NE GE+DKYKARLV
Sbjct: 882 LHDLPTEAKKVGVKWIYKTKFNENGEMDKYKARLV 916


>dbj|GAU31045.1| hypothetical protein TSUD_214810 [Trifolium subterraneum]
          Length = 1248

 Score =  172 bits (435), Expect = 4e-46
 Identities = 91/201 (45%), Positives = 122/201 (60%), Gaps = 22/201 (10%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWE---SSHKIELKLDLDWGEAEDMTSS 367
            ISDESK Y++YDP+++KI++SRDV+F+E   WDW    +  +I ++   +       T S
Sbjct: 602  ISDESKAYKLYDPVSKKIIISRDVIFDETKGWDWNEKPTKQRISIEDHAESSATVSETDS 661

Query: 366  NEENPTECDIPAPTETVASSSNAD------------------RNPPSWLNDYAIGEELTD 241
              + PT+ D    T  V +   +D                  R PP+W  D+    E  +
Sbjct: 662  EWQEPTQADGVNVTNEVINDHVSDTESSENDEDVVTNLGPRVRRPPAWTRDFVTNLEHQE 721

Query: 240  DDEIANIVMNEN-SDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVK 64
            D+E+ N+VM  N SDP  YEEAAK E WR+ MD EI SI +N T +LT+LPNG+KKIGVK
Sbjct: 722  DEELQNLVMFSNESDPRTYEEAAKFEVWRKTMDQEIESIEKNDTWELTDLPNGSKKIGVK 781

Query: 63   WIYKTKLNELGEVDKYKARLV 1
            WIYKTK NE G+V+KYKARLV
Sbjct: 782  WIYKTKYNESGKVEKYKARLV 802


>dbj|GAU15733.1| hypothetical protein TSUD_235460 [Trifolium subterraneum]
          Length = 1067

 Score =  171 bits (432), Expect = 1e-45
 Identities = 87/205 (42%), Positives = 131/205 (63%), Gaps = 26/205 (12%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGEAEDMTSS--- 367
            ISDESK Y++Y+P+ +KIV+SRDVVF+E   WDWE+  KI++ ++ D+   +D  +    
Sbjct: 680  ISDESKAYKLYNPVDKKIVISRDVVFDETKGWDWENKEKIKV-INTDYNLLDDSITEAAT 738

Query: 366  -----------NEENPTECDIPAPT---ETVASSSNAD---------RNPPSWLNDYAIG 256
                       ++++ T+ +    T   E + S +++D         R  PS L D+ IG
Sbjct: 739  PVTPTIEEGAISDDSSTDAEAQGATSSEEIIVSDTSSDDDAVLGPRIRKTPSHLRDFVIG 798

Query: 255  EELTDDDEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKK 76
            +E  ++ ++ N+ +  +SDP  YEEA+K +KW+QAMD EI +I  N T +L++LP GAK 
Sbjct: 799  KEAEEEQQLHNLAVYSSSDPETYEEASKSQKWKQAMDVEIEAIEANNTWELSDLPKGAKA 858

Query: 75   IGVKWIYKTKLNELGEVDKYKARLV 1
            IGVKW+YKTK NE+G+VDKYKARLV
Sbjct: 859  IGVKWVYKTKYNEIGQVDKYKARLV 883


>gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 884

 Score =  170 bits (431), Expect = 1e-45
 Identities = 87/204 (42%), Positives = 129/204 (63%), Gaps = 21/204 (10%)
 Frame = -1

Query: 549  LFCCISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGEA----- 385
            +F  +S+ESK YR+Y+P  +KI++SRDV+F+E++ W+W  + + + ++ +D  EA     
Sbjct: 661  VFVGVSEESKAYRLYNPTTKKIIISRDVLFDEESMWEWSRAEQ-QQQISIDLEEAGQEVN 719

Query: 384  EDMTSSNEENPTECDIPAPTETVASSSNA----------------DRNPPSWLNDYAIGE 253
            + + SS E   ++    +P E   SSS +                 R  PSW+ DY  G+
Sbjct: 720  QPLQSSLESQGSQPPAQSPREVSPSSSTSALVPNEDQQSVLEPQRQRKRPSWMIDYVSGD 779

Query: 252  ELTDDDEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKI 73
            EL+D+D  A+  +   SDP  + EA K+EKW++AMD EI +I +NGT +LT+LP G K I
Sbjct: 780  ELSDEDTAAHFALFTGSDPILFAEAVKEEKWKKAMDVEIQAIEKNGTWELTDLPKGQKTI 839

Query: 72   GVKWIYKTKLNELGEVDKYKARLV 1
            GVKW+YKTKLNE GE+DK+KARLV
Sbjct: 840  GVKWVYKTKLNEKGEIDKFKARLV 863


>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1044

 Score =  170 bits (430), Expect = 2e-45
 Identities = 92/191 (48%), Positives = 126/191 (65%), Gaps = 12/191 (6%)
 Frame = -1

Query: 537 ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLD-LDWGEAEDMTSSNE 361
           +S ESK YR+YDPI+++IVVSRDVVFEED +WDW  + + E++LD LDW + E+  + + 
Sbjct: 409 VSKESKAYRLYDPISERIVVSRDVVFEEDENWDWGRTAE-EVRLDVLDWSDGEEEENESA 467

Query: 360 ENPTECDIPAPTETVASSSNAD----------RNPPSWLNDYAIGEELTDDDEIANIVM- 214
           ++  E +     E   ++ +A+          R  P W+ DY  GE L++++E  NIVM 
Sbjct: 468 QSEEENEFAQSEEENVNNDDAEEEEILEEGRTRMQPVWMQDYVSGEGLSEEEETNNIVMF 527

Query: 213 NENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWIYKTKLNEL 34
              +DP  +EEA K  KW+ AMD EI +I +N T +LT LP GAK IGVKWI+KTKLNE 
Sbjct: 528 TYVTDPTTFEEAFKSAKWKAAMDQEIEAIERNHTWELTILPAGAKTIGVKWIFKTKLNEN 587

Query: 33  GEVDKYKARLV 1
           GEV+K KARLV
Sbjct: 588 GEVEKCKARLV 598


>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  170 bits (430), Expect = 2e-45
 Identities = 91/192 (47%), Positives = 127/192 (66%), Gaps = 13/192 (6%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLD-LDWGEAEDMTSSNE 361
            +S+ESK YR+YDPI+++IVVSRDVVFEED  W+W  + + E++LD LDW + E+  + + 
Sbjct: 688  VSEESKAYRLYDPISERIVVSRDVVFEEDESWEWGRTAE-EVRLDVLDWSDGEEEENESA 746

Query: 360  ENPTECDIPAPTETVASSSNAD-----------RNPPSWLNDYAIGEELTDDDEIANIVM 214
            ++  E +     E   ++ +A+           R  P W+ DY  GE L++++E  N+VM
Sbjct: 747  QSEEENEYAQSEEENVNNDDAEEEEEILEEGRTRMQPVWMQDYVSGEGLSEEEETNNVVM 806

Query: 213  NEN-SDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWIYKTKLNE 37
              + +DP  +EEA K  KW+ AMD EI +I +N T +LT LP GAK IGVKWI+KTKLNE
Sbjct: 807  FTSVTDPATFEEAFKSAKWKAAMDQEIEAIERNHTWELTTLPAGAKTIGVKWIFKTKLNE 866

Query: 36   LGEVDKYKARLV 1
             GEVDK KARLV
Sbjct: 867  NGEVDKCKARLV 878


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  169 bits (427), Expect = 5e-45
 Identities = 93/182 (51%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDW--GEAEDMTSSN 364
            +S ESK YR+YDPI+++IVVSRDVVFEED  WDW  + + E    LDW  GE E+  S+ 
Sbjct: 690  VSKESKAYRLYDPISERIVVSRDVVFEEDESWDWGRTAEEERLDVLDWSDGEEEENESAQ 749

Query: 363  EENPTECDIPAPTETVASSSNADRNPPSWLNDYAIGEELTDDDEIANIVMNEN-SDPNCY 187
             E     +  A  E +       R  P W+ DY  GE L++++E  NIVM  + +DP  +
Sbjct: 750  SEEENVNNDDAEEEEILEEGRT-RLQPIWMQDYVSGEGLSEEEETNNIVMFTSVTDPTTF 808

Query: 186  EEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWIYKTKLNELGEVDKYKAR 7
            EEA K  KW+ AMD EI +I +N T +LT LP GAK IGVKWI+KTKLNE GEV+K KAR
Sbjct: 809  EEAFKSAKWKAAMDQEIEAIERNHTWELTILPAGAKTIGVKWIFKTKLNENGEVEKCKAR 868

Query: 6    LV 1
            LV
Sbjct: 869  LV 870


>gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 551

 Score =  164 bits (415), Expect = 1e-44
 Identities = 77/169 (45%), Positives = 110/169 (65%), Gaps = 9/169 (5%)
 Frame = -1

Query: 537 ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKIELKLDLDWGEAEDMTSSNEE 358
           +S+ESKGYR+Y+PI +KIV+SRDVVFEED  W+W  SH+ E   DL++G+ ++     EE
Sbjct: 383 MSEESKGYRLYNPITRKIVISRDVVFEEDTQWNWNVSHREEQFADLEYGDTKNTAEVEEE 442

Query: 357 NPTECDIP---------APTETVASSSNADRNPPSWLNDYAIGEELTDDDEIANIVMNEN 205
           N  + +              + +      +R+PP W+ DY  GEE ++ ++  N+ + + 
Sbjct: 443 NTADGESNDEEGNQSQNEENKVINDERGRNRHPPGWMRDYVDGEEFSESEDAINMALIDC 502

Query: 204 SDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAKKIGVKWI 58
           +DP  +E   K  KWRQAMD+EINSIV+NGT +LT+LP GAKKIGVKWI
Sbjct: 503 TDPESFEVVVKSSKWRQAMDAEINSIVKNGTWELTDLPVGAKKIGVKWI 551


>dbj|GAU43961.1| hypothetical protein TSUD_283880 [Trifolium subterraneum]
          Length = 1273

 Score =  167 bits (422), Expect = 2e-44
 Identities = 88/206 (42%), Positives = 126/206 (61%), Gaps = 27/206 (13%)
 Frame = -1

Query: 537  ISDESKGYRMYDPIAQKIVVSRDVVFEEDAHWDWESSHKI-ELKLDLDW--------GEA 385
            ISDESK Y++Y+P+ +KIV+SRDVVF+E   WDWE+  K+ ++  D D+           
Sbjct: 680  ISDESKAYKLYNPVDKKIVISRDVVFDEAKGWDWENKEKLKDISTDYDFLDDSVIEPAAN 739

Query: 384  EDMTSSNEENPTECDIP---------APTETVASSSNAD---------RNPPSWLNDYAI 259
            E +T +NEE  T  D           +  E + S + +D         +  PS L D+ I
Sbjct: 740  ETVTPTNEETSTRDDSSTYVEVQRDASSEEIIVSDTRSDDGIELGPRIKKTPSHLRDFVI 799

Query: 258  GEELTDDDEIANIVMNENSDPNCYEEAAKDEKWRQAMDSEINSIVQNGT*KLTELPNGAK 79
            G+E  ++ ++ N+ +  N DP  YEEA+K  KW+QAMD+EI +I  N T +L++LP GAK
Sbjct: 800  GKEAEEEQQLHNLDVYSNGDPETYEEASKSHKWKQAMDTEIEAIKANNTWELSDLPKGAK 859

Query: 78   KIGVKWIYKTKLNELGEVDKYKARLV 1
             IGVKW+YKTK NE G++DK+KARLV
Sbjct: 860  AIGVKWVYKTKYNENGKIDKHKARLV 885