BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00037488
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   231   2e-67
gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo...   185   3e-52
gb|KYP72181.1| Retrovirus-related Pol polyprotein from transposo...   166   4e-47
gb|KYP37003.1| Retrovirus-related Pol polyprotein from transposo...   164   6e-47
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   171   2e-46
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   171   2e-46
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]      170   6e-46
gb|PNX92571.1| histone deacetylase [Trifolium pratense]               169   2e-45
gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposo...   163   3e-44
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo...   164   1e-43
gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposo...   164   1e-43
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo...   163   2e-43
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo...   163   2e-43
gb|KYP54595.1| Retrovirus-related Pol polyprotein from transposo...   157   2e-43
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   162   4e-43
gb|KYP47705.1| Retrovirus-related Pol polyprotein from transposo...   154   5e-43
gb|KYP47703.1| Retrovirus-related Pol polyprotein from transposo...   154   5e-43
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   160   2e-42
dbj|GAU13081.1| hypothetical protein TSUD_173810 [Trifolium subt...   159   3e-42
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   157   1e-41

>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1429

 Score =  231 bits (590), Expect = 2e-67
 Identities = 108/166 (65%), Positives = 132/166 (79%), Gaps = 4/166 (2%)
 Frame = +1

Query: 1   NDQVLLQGKLNSAGLYPLPYDVQSNVSLPS----VNSIVSHTPTAYFTWHNRLGHPNVDT 168
           NDQ+LLQGKL+ AGLYP+     +  SL S    V+SIV+     YF WH+RLGH N+DT
Sbjct: 466 NDQILLQGKLDKAGLYPIHSQSSTTSSLSSRHHSVHSIVTSHNDLYFQWHHRLGHTNLDT 525

Query: 169 LNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWGPAPMT 348
           +N+VLKSCN+ TF KN   FC+S CCL KSH+LPS  S + YN+PLEL++CDLWGPAPM 
Sbjct: 526 MNNVLKSCNMPTFNKNKTDFCIS-CCLGKSHRLPSQLSQSTYNSPLELIYCDLWGPAPMQ 584

Query: 349 SSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
           SSMGYKYYISF+DAFS++ W+YFLHDKSE+LTIF+QFKAL ELQL+
Sbjct: 585 SSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAELQLN 630


>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 623

 Score =  185 bits (469), Expect = 3e-52
 Identities = 94/181 (51%), Positives = 118/181 (65%), Gaps = 22/181 (12%)
 Frame = +1

Query: 10  VLLQGKLNSAGLY---------------PLPYDVQSNVSLPSV-------NSIVSHTPTA 123
           VLL+G L + GLY               PL     S+++L +        +++ S TPT 
Sbjct: 42  VLLEGHLTADGLYSFPHLSFSCCQPQHLPLSIKPSSSIALSTTCTSRVCSDTVQSPTPTT 101

Query: 124 YFTWHNRLGHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNP 303
              WHNRLGHP    L +VLK C +    KN   FCV ACC+ KSH+LPSS S TVY+ P
Sbjct: 102 LSLWHNRLGHPCFSVLQNVLKFCKIPVSNKNEVQFCV-ACCMGKSHRLPSSSSTTVYSTP 160

Query: 304 LELVFCDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQL 483
           LEL+FCDLWGP PM SSMGY YY+SFVDA+SRFTWIYFL +KSE+LTIF+QF+A+ +LQ 
Sbjct: 161 LELLFCDLWGPTPMLSSMGYHYYMSFVDAYSRFTWIYFLKNKSEALTIFKQFQAMAKLQF 220

Query: 484 H 486
           +
Sbjct: 221 N 221


>gb|KYP72181.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 363

 Score =  166 bits (419), Expect = 4e-47
 Identities = 82/176 (46%), Positives = 113/176 (64%), Gaps = 15/176 (8%)
 Frame = +1

Query: 4   DQVLLQGKLNSAGLYPLP---------------YDVQSNVSLPSVNSIVSHTPTAYFTWH 138
           ++VL+QG + S GLY  P                   SN  +  V+ + +   +++  WH
Sbjct: 82  NEVLVQGNVGSDGLYCFPNLQLQAAPSNSSAFIVSNNSNTVVSDVDVLNNVKSSSHTLWH 141

Query: 139 NRLGHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVF 318
            RLGHPN      V + CN+    K +  FC +ACC+ K+H+LPS+ SD+VY NPLELV+
Sbjct: 142 ARLGHPNFHVQKLVSQQCNIPVVNKIDGFFC-NACCMGKAHRLPSNLSDSVYKNPLELVY 200

Query: 319 CDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
            DLWGPAP+ SS  YKYY+SFVDA+SRFTWIY L +KS++LT+F+QFK +VELQ +
Sbjct: 201 SDLWGPAPIQSSNNYKYYLSFVDAYSRFTWIYLLQNKSDTLTVFKQFKMMVELQFN 256


>gb|KYP37003.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 321

 Score =  164 bits (415), Expect = 6e-47
 Identities = 81/176 (46%), Positives = 114/176 (64%), Gaps = 15/176 (8%)
 Frame = +1

Query: 4   DQVLLQGKLNSAGLYPLP---------------YDVQSNVSLPSVNSIVSHTPTAYFTWH 138
           ++VL+QG + S GLY  P                   SN+ +  V+ + +   +++  WH
Sbjct: 82  NEVLVQGNVGSDGLYCFPNLQLQAAPSNSSAFIVSNNSNIVVSDVDVLNNVKSSSHTLWH 141

Query: 139 NRLGHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVF 318
            RLGHPN      V + CN+    K +  FC +ACC+ K+H+LPS+ S++VY NPLELV+
Sbjct: 142 ARLGHPNFHVQKLVSQQCNIPVVNKIDGFFC-NACCMGKAHRLPSNLSNSVYKNPLELVY 200

Query: 319 CDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
            DLWGPAP+ SS  YKYY+SFVDA+SRFTWIY L +KS++LT+F+QFK +VELQ +
Sbjct: 201 RDLWGPAPIQSSNNYKYYLSFVDAYSRFTWIYLLQNKSDTLTVFKQFKMMVELQFN 256


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score =  171 bits (434), Expect = 2e-46
 Identities = 80/171 (46%), Positives = 114/171 (66%), Gaps = 10/171 (5%)
 Frame = +1

Query: 4   DQVLLQGKLNSAGLYPLP----------YDVQSNVSLPSVNSIVSHTPTAYFTWHNRLGH 153
           ++VLLQG + S GLY  P             Q    + SVN+  + +P ++ TWH+RLGH
Sbjct: 114 NEVLLQGSVGSDGLYKFPALLPNPSTQSVQQQQLARIFSVNTAAT-SPVSFATWHSRLGH 172

Query: 154 PNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWG 333
           PNVD + HV ++ N+     N  +FC + CCL KSH+LPS+ S T+YN P +LV+ DLWG
Sbjct: 173 PNVDVMKHVSRNYNIQLVSNNKSNFC-TPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWG 231

Query: 334 PAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
           PAP+TS+ GY+YY++FVDA +RFTWIY L  K+++  +F+QF A+V+ Q H
Sbjct: 232 PAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYH 282


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1408

 Score =  171 bits (434), Expect = 2e-46
 Identities = 80/171 (46%), Positives = 114/171 (66%), Gaps = 10/171 (5%)
 Frame = +1

Query: 4   DQVLLQGKLNSAGLYPLP----------YDVQSNVSLPSVNSIVSHTPTAYFTWHNRLGH 153
           ++VLLQG + S GLY  P             Q    + SVN+  + +P ++ TWH+RLGH
Sbjct: 449 NEVLLQGSVGSDGLYKFPALLPNPSTQSVQQQQLARIFSVNTAAT-SPVSFATWHSRLGH 507

Query: 154 PNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWG 333
           PNVD + HV ++ N+     N  +FC + CCL KSH+LPS+ S T+YN P +LV+ DLWG
Sbjct: 508 PNVDVMKHVSRNYNIQLVSNNKSNFC-TPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWG 566

Query: 334 PAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
           PAP+TS+ GY+YY++FVDA +RFTWIY L  K+++  +F+QF A+V+ Q H
Sbjct: 567 PAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYH 617


>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1489

 Score =  170 bits (431), Expect = 6e-46
 Identities = 88/177 (49%), Positives = 115/177 (64%), Gaps = 18/177 (10%)
 Frame = +1

Query: 7    QVLLQGKLNSAGLY--------PLPYDVQSNVSLPSVNSIVSHTPTAYFT--------WH 138
            ++LLQG + + GLY        P      S +  P V S+ S++  +  +        WH
Sbjct: 515  EILLQGNVGADGLYSFSNISIIPAKSSTASTLHRPIVCSVTSNSNVSSSSVSLNSQHMWH 574

Query: 139  NRLGHPNVDTLNHVLKSCNLSTFQKNNE--SFCVSACCLAKSHKLPSSPSDTVYNNPLEL 312
             RLGHPN  TL   LK CN+S FQ N+   S   +ACC+ K+H+L S PS TVY++PLEL
Sbjct: 575  LRLGHPNNQTLKSALKLCNIS-FQNNDNDVSLLCTACCMGKAHRLHSPPSQTVYSHPLEL 633

Query: 313  VFCDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQL 483
            VF DLWGPAP TSS+GY YYI+F+DAFS++TWIY L  KSE+LT+F+QFK + ELQL
Sbjct: 634  VFSDLWGPAPSTSSLGYHYYITFIDAFSKYTWIYLLKSKSEALTVFKQFKTMAELQL 690


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  169 bits (427), Expect = 2e-45
 Identities = 84/171 (49%), Positives = 116/171 (67%), Gaps = 12/171 (7%)
 Frame = +1

Query: 4    DQVLLQGKLNSAGLYPLP----YDVQSN--VSLPSVNS------IVSHTPTAYFTWHNRL 147
            D  LL+G + S GLY  P    +  +S+  VSL SVNS      + S  P++++ WH RL
Sbjct: 512  DATLLKGHVGSDGLYEFPAVSLHSAKSSPLVSLASVNSTSTCNKVSSLAPSSHYLWHQRL 571

Query: 148  GHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDL 327
            GHP+ ++   V++ CN +   K++  FC +ACC+ K+H+L S  S T Y+ PLELV+CDL
Sbjct: 572  GHPSHNSFKLVMQHCNFTVNNKDSSQFC-AACCMGKAHRLHSPLSHTTYSAPLELVYCDL 630

Query: 328  WGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQ 480
            WGP+P  S  GY YYISFVDA+S+FTWIY L  KS++L IF+QFK++VELQ
Sbjct: 631  WGPSPSPSKQGYHYYISFVDAYSKFTWIYLLKSKSDALLIFKQFKSMVELQ 681


>gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 603

 Score =  163 bits (412), Expect = 3e-44
 Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 13/173 (7%)
 Frame = +1

Query: 7   QVLLQGKLNSAGLYPLPYDVQSNVSLPSVNSIVSHTPTAYF-------------TWHNRL 147
           +VLLQG +   GLY  P    + +  PS  S+    P   F             TWH+RL
Sbjct: 115 EVLLQGSVGPDGLYQFP----ALLPTPSTQSVQQVQPARSFSVNTAAKSYVSFATWHSRL 170

Query: 148 GHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDL 327
           GHPNVD + HV ++ N+     N   FC + CCL KSH+LPS+ S  VYN P +LV+ DL
Sbjct: 171 GHPNVDVMKHVSRNFNIQLVTNNKSDFC-TPCCLGKSHRLPSNLSKIVYNTPFDLVYNDL 229

Query: 328 WGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
           WGPAP+TS+ GY+YY++FVDA +RFTWIY L +K+++  +F+QF A+V  Q H
Sbjct: 230 WGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKAQTFNVFKQFHAMVNNQYH 282


>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1064

 Score =  164 bits (414), Expect = 1e-43
 Identities = 87/184 (47%), Positives = 114/184 (61%), Gaps = 24/184 (13%)
 Frame = +1

Query: 1    NDQVLLQGKLNSAGLYP-------------LPYDVQSNVSL-----PSVNSI------VS 108
            N+  LLQG++ S GLY              +P  + SN S+     PSVNS+      V 
Sbjct: 490  NNATLLQGQVGSDGLYEFPAIRLHTGKPPLVPKSLSSNSSMSVAKFPSVNSLTVANNPVC 549

Query: 109  HTPTAYFTWHNRLGHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDT 288
             T  + + WH RLGHP+ +TL  VL+ C +      + S   +ACC+ K+HKL S PS T
Sbjct: 550  ITQNSQYMWHLRLGHPHSNTLKLVLQHCKIPFNSNKDVSTFCTACCMGKAHKLHSLPSHT 609

Query: 289  VYNNPLELVFCDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKAL 468
             Y +PLELVF DLWGP+P  S++GY YYI+FVDA+SRFTWIY L  KS++  IF+QFKA+
Sbjct: 610  QYTHPLELVFSDLWGPSPQPSTLGYNYYITFVDAYSRFTWIYLLKSKSDAFIIFKQFKAM 669

Query: 469  VELQ 480
            VELQ
Sbjct: 670  VELQ 673


>gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1102

 Score =  164 bits (414), Expect = 1e-43
 Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 13/173 (7%)
 Frame = +1

Query: 7   QVLLQGKLNSAGLYPLPYDVQSNVSLPSVNSIVSHTPTAYF-------------TWHNRL 147
           +VLLQG +   GLY  P    + +  PS  S+    P   F             TWH+RL
Sbjct: 496 EVLLQGLVGPDGLYQFP----TLLPTPSPQSVQQVQPARTFSVNTATKSSISFATWHSRL 551

Query: 148 GHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDL 327
           GHPNVD + HV ++ N+     N  +FC + CCL KSH+LPS+ S T+YN P +LV+ DL
Sbjct: 552 GHPNVDVMKHVSRNFNIQLVTNNKSNFC-TPCCLGKSHRLPSNLSKTIYNTPFDLVYNDL 610

Query: 328 WGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
           WGPAP+TS+ GY+YY++FVDA +RFTWIY L +K+++  +F+QF A+V  Q H
Sbjct: 611 WGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKAQTFNVFKQFHAMVNNQYH 663


>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1085

 Score =  163 bits (412), Expect = 2e-43
 Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 13/173 (7%)
 Frame = +1

Query: 7   QVLLQGKLNSAGLYPLPYDVQSNVSLPSVNSIVSHTPTAYF-------------TWHNRL 147
           +VLLQG +   GLY  P    + +  PS  S+    P   F             TWH+RL
Sbjct: 322 EVLLQGSVGPDGLYQFP----ALLPTPSTQSVQQVQPARSFSVNTAAKSYVSFATWHSRL 377

Query: 148 GHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDL 327
           GHPNVD + HV ++ N+     N   FC + CCL KSH+LPS+ S  VYN P +LV+ DL
Sbjct: 378 GHPNVDVMKHVSRNFNIQLVTNNKSDFC-TPCCLGKSHRLPSNLSKIVYNTPFDLVYNDL 436

Query: 328 WGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
           WGPAP+TS+ GY+YY++FVDA +RFTWIY L +K+++  +F+QF A+V  Q H
Sbjct: 437 WGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKAQTFNVFKQFHAMVNNQYH 489


>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1516

 Score =  163 bits (412), Expect = 2e-43
 Identities = 86/180 (47%), Positives = 113/180 (62%), Gaps = 22/180 (12%)
 Frame = +1

Query: 10   VLLQGKLNSAGLYPLPYDVQSNVSL-------------PSVNSIVSHTP--------TAY 126
            VLLQG + S GLY       SN+S+             PSV S+ S++          + 
Sbjct: 535  VLLQGSVGSDGLYSF-----SNISIEPAKPSTLHSSFQPSVCSVSSNSNLCSSNLSFNSL 589

Query: 127  FTWHNRLGHPNVDTLNHVLKSCNLS-TFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNP 303
            + WH RLGHPN  TL   L  CN+  T  K++ S   +ACC+ K+H+L SS S T YN+P
Sbjct: 590  YLWHLRLGHPNDQTLKFTLNQCNIPFTNNKSDVSALCTACCMGKAHRLHSSASQTTYNHP 649

Query: 304  LELVFCDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQL 483
            LELVF DLWGP+P  SS+G+ YYI+F+DAFSR+TWIY L  KS++ T+F+QFKA+ ELQL
Sbjct: 650  LELVFSDLWGPSPTVSSLGFHYYITFIDAFSRYTWIYLLKSKSDAFTVFKQFKAMAELQL 709


>gb|KYP54595.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 423

 Score =  157 bits (398), Expect = 2e-43
 Identities = 68/133 (51%), Positives = 97/133 (72%)
 Frame = +1

Query: 88  SVNSIVSHTPTAYFTWHNRLGHPNVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKL 267
           SVN+  + +  ++ TWH+RLGHPNVD + HV ++ N+     N  +FC + CCL KSH+L
Sbjct: 267 SVNTAATSS-VSFATWHSRLGHPNVDVMKHVSRNFNIQLVNNNKSNFC-TPCCLGKSHRL 324

Query: 268 PSSPSDTVYNNPLELVFCDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTI 447
           PS+ S T+YN P +LV+ DLWGPAP+TS+ GY+YY++FVDA +RFTWIY L  K+++  +
Sbjct: 325 PSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNV 384

Query: 448 FRQFKALVELQLH 486
           F+QF A+V  Q H
Sbjct: 385 FKQFHAMVNNQYH 397


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1268

 Score =  162 bits (410), Expect = 4e-43
 Identities = 81/170 (47%), Positives = 115/170 (67%), Gaps = 9/170 (5%)
 Frame = +1

Query: 4   DQVLLQGKLNSAGLYPL-------PYDVQSNVSLPSVNSIVSH--TPTAYFTWHNRLGHP 156
           +++LLQG + S GLY         P  + S+    SV+  VS    P+++ +WH RL HP
Sbjct: 368 NEILLQGVVGSDGLYSFSNLELQGPSVLVSSSMASSVDPAVSAFAIPSSHTSWHTRLSHP 427

Query: 157 NVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWGP 336
           N   L  VL  CN++   +N   FC S+CC+ KSH+LPS  S++VY+ PL+L+F DLWGP
Sbjct: 428 NSHVLKLVLNHCNIAPSNRNVSEFC-SSCCVGKSHRLPSLVSESVYSAPLDLIFTDLWGP 486

Query: 337 APMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQLH 486
           + + S  GY YY+SF+DAFS+FTWIY L  KS++L++F+QFKA+VELQL+
Sbjct: 487 SHVVSHSGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLN 536


>gb|KYP47705.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 319

 Score =  154 bits (389), Expect = 5e-43
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 10/168 (5%)
 Frame = +1

Query: 7   QVLLQGKLNSAGLYPLP--------YDVQ--SNVSLPSVNSIVSHTPTAYFTWHNRLGHP 156
           ++LLQG +   GLY  P          VQ     + PSVN+  S    ++ TWH+RLGHP
Sbjct: 115 EILLQGLVGPDGLYQFPALLPTTSTQPVQHFKTATSPSVNT-TSQKSVSFATWHSRLGHP 173

Query: 157 NVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWGP 336
           NVD +  V ++ N+ +      +FCVS CCL KSH+LPS+ S TVY    EL+F +LWGP
Sbjct: 174 NVDVMKLVFRNFNIQSVNNIESTFCVS-CCLGKSHRLPSNFSKTVYTTSFELIFSNLWGP 232

Query: 337 APMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQ 480
           AP T + GY+YY++FVDA +RFTWIY L +K+++L IF+QF  +V+ Q
Sbjct: 233 APATPTCGYQYYLTFVDAHTRFTWIYLLKNKAQTLGIFKQFHTMVKNQ 280


>gb|KYP47703.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 319

 Score =  154 bits (389), Expect = 5e-43
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 10/168 (5%)
 Frame = +1

Query: 7   QVLLQGKLNSAGLYPLP--------YDVQ--SNVSLPSVNSIVSHTPTAYFTWHNRLGHP 156
           ++LLQG +   GLY  P          VQ     + PSVN+  S    ++ TWH+RLGHP
Sbjct: 115 EILLQGLVGPDGLYQFPALLPTTSTQPVQHFKTATSPSVNT-TSQKSVSFATWHSRLGHP 173

Query: 157 NVDTLNHVLKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWGP 336
           NVD +  V ++ N+ +      +FCVS CCL KSH+LPS+ S TVY    EL+F +LWGP
Sbjct: 174 NVDVMKLVFRNFNIQSVNNIESTFCVS-CCLGKSHRLPSNFSKTVYTTSFELIFSNLWGP 232

Query: 337 APMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQ 480
           AP T + GY+YY++FVDA +RFTWIY L +K+++L IF+QF  +V+ Q
Sbjct: 233 APATPTCGYQYYLTFVDAHTRFTWIYLLKNKAQTLGIFKQFHTMVKNQ 280


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  160 bits (404), Expect = 2e-42
 Identities = 78/160 (48%), Positives = 102/160 (63%)
 Frame = +1

Query: 1   NDQVLLQGKLNSAGLYPLPYDVQSNVSLPSVNSIVSHTPTAYFTWHNRLGHPNVDTLNHV 180
           N + LL G L   GLY  P  +      PS +++ S +  +Y TWH+RLGHP+ D L  V
Sbjct: 111 NSETLLHGVLGPDGLYQFPSLLPPRQ--PSAHTVSSQS-VSYATWHSRLGHPHNDVLKSV 167

Query: 181 LKSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWGPAPMTSSMG 360
            K CN     K+   FC S CCL KSHKLPS  S TVY+ P EL++ DLWGPAP+ S  G
Sbjct: 168 FKLCNFPNINKSVSDFCTS-CCLGKSHKLPSQLSKTVYHTPFELIYSDLWGPAPVLSDNG 226

Query: 361 YKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQ 480
           Y+YY++FVDA +RFTWI+ L  K+ +L +F+QF A+V  Q
Sbjct: 227 YQYYVTFVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQ 266


>dbj|GAU13081.1| hypothetical protein TSUD_173810 [Trifolium subterraneum]
          Length = 1295

 Score =  159 bits (403), Expect = 3e-42
 Identities = 84/183 (45%), Positives = 113/183 (61%), Gaps = 23/183 (12%)
 Frame = +1

Query: 4    DQVLLQGKLNSAGLYPLPYDVQSNVSLP---SVNSIVSHTPTAYFT-------------- 132
            ++VLLQG + S GLY       SN+S+    S+N   +  P+ + T              
Sbjct: 500  NEVLLQGNVGSDGLYSF-----SNISIAPAKSLNLNSNFKPSVFNTQASSILYNSRQSCN 554

Query: 133  ----WHNRLGHPNVDTLNHVLKSCNLSTFQKNNE--SFCVSACCLAKSHKLPSSPSDTVY 294
                WH RLGHPN  TL   LK CN+      N+  SFC +ACC+ K+H+L SS S T Y
Sbjct: 555  SLYLWHLRLGHPNDQTLKSTLKQCNIPFINNKNDVSSFC-TACCMGKAHRLHSSASQTTY 613

Query: 295  NNPLELVFCDLWGPAPMTSSMGYKYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVE 474
             +PL+LVF DLWGP+P  SS+G++YYI+F+DA+SR+TWIY L  KS++ TIF+QFK + E
Sbjct: 614  THPLKLVFSDLWGPSPCVSSLGFQYYITFIDAYSRYTWIYLLKSKSDAFTIFKQFKTMAE 673

Query: 475  LQL 483
            LQL
Sbjct: 674  LQL 676


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 785

 Score =  157 bits (398), Expect = 1e-41
 Identities = 75/159 (47%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
 Frame = +1

Query: 13  LLQGKLNSAGLYPLPYDVQSNVS---LPSVNSIVSHTPTAYFTWHNRLGHPNVDTLNHVL 183
           LL G +   GLY  P  +Q        PS N+   H+   Y TWH+RLGHP+ D +  V 
Sbjct: 363 LLMGVVGPDGLYQFPSLLQPRQQPAITPSANTASCHS-VPYVTWHSRLGHPHNDVIKSVF 421

Query: 184 KSCNLSTFQKNNESFCVSACCLAKSHKLPSSPSDTVYNNPLELVFCDLWGPAPMTSSMGY 363
           + CN     K    FC + CCL KSHKLPS+ S TVY+ P EL++ DLWGPAP+TS  GY
Sbjct: 422 RLCNFPIINKTASDFC-TPCCLGKSHKLPSNSSKTVYHTPFELIYSDLWGPAPITSDNGY 480

Query: 364 KYYISFVDAFSRFTWIYFLHDKSESLTIFRQFKALVELQ 480
           +YY++FVDA +RFTWI+ L  K+ +L +F+QF A+++ Q
Sbjct: 481 QYYVTFVDAHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQ 519