BLASTX nr result

ID: Astragalus22_contig00037365 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00037365
         (369 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU14768.1| hypothetical protein TSUD_204170 [Trifolium subt...    59   1e-07
dbj|GAU25827.1| hypothetical protein TSUD_30910 [Trifolium subte...    54   8e-07
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    55   2e-06
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                     55   5e-06

>dbj|GAU14768.1| hypothetical protein TSUD_204170 [Trifolium subterraneum]
          Length = 503

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = +2

Query: 2   SWLLRKRYDDLNFCATPSWKWIWNIEGPKKVKLLLWTACHNLIP 133
           SWLL+K+  + N     SWKWIWN+  P+K+K L+W  CHN IP
Sbjct: 262 SWLLKKKQHNPN---NKSWKWIWNLRAPEKIKFLIWCICHNSIP 302


>dbj|GAU25827.1| hypothetical protein TSUD_30910 [Trifolium subterraneum]
          Length = 592

 Score = 53.5 bits (127), Expect(2) = 8e-07
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +2

Query: 2   SWLLRKRYDDLNFCATPSWKWIWNIEGPKKVKLLLWTACHNLIPIAS 142
           +WLL  R   +N   + SW WIW I+ P+K+K   W ACHN +P  S
Sbjct: 280 NWLLSLRDLVINHNPSHSWSWIWKIQLPEKIKFFFWLACHNFVPTLS 326



 Score = 26.9 bits (58), Expect(2) = 8e-07
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +1

Query: 241 IGFNNQLLFDIHDVGVWLNLGIT 309
           IGFNN   F   DV  WL LG T
Sbjct: 366 IGFNNMDFFSNMDVYDWLKLGAT 388


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 21/46 (45%), Positives = 28/46 (60%)
 Frame = +2

Query: 5   WLLRKRYDDLNFCATPSWKWIWNIEGPKKVKLLLWTACHNLIPIAS 142
           WLL  R    +    PSW WIWN++ P+K K L+W AC N++P  S
Sbjct: 103 WLLTFRVPATDIIPHPSWSWIWNLQVPEKYKFLIWLACQNVVPTLS 148


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = +2

Query: 5    WLLRKRYDDLNFCATPSWKWIWNIEGPKKVKLLLWTACHNLIP 133
            WLL+++Y   N  +  SW WIW ++ P+K+K L+W ACH+ IP
Sbjct: 978  WLLQQKY---NVPSIQSWNWIWKLQAPEKIKFLIWCACHHSIP 1017


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