BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00037200
         (685 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP40818.1| Retrovirus-related Pol polyprotein from transposo...   247   1e-76
gb|PNX57885.1| copia-type polyprotein, partial [Trifolium pratense]   235   2e-75
gb|PNX55944.1| putative LRR receptor-like protein kinase, partia...   235   5e-73
gb|PNX60432.1| putative LRR receptor-like protein kinase [Trifol...   221   9e-70
gb|PNX85850.1| hypothetical protein L195_g041924 [Trifolium prat...   229   1e-69
gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifo...   229   2e-68
gb|PNX60516.1| copia-type polyprotein, partial [Trifolium pratense]   216   2e-68
gb|PNX75114.1| putative copia-type protein [Trifolium pratense]       224   3e-68
gb|PNX62606.1| copia-type polyprotein, partial [Trifolium pratense]   214   4e-68
gb|KYP58220.1| Retrovirus-related Pol polyprotein from transposo...   221   1e-67
dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subt...   233   3e-67
gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense]   225   3e-67
dbj|GAU31929.1| hypothetical protein TSUD_271130, partial [Trifo...   225   4e-67
gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinen...   226   8e-67
dbj|GAU46899.1| hypothetical protein TSUD_296780 [Trifolium subt...   232   9e-67
emb|CAN67886.1| hypothetical protein VITISV_042574 [Vitis vinifera]   220   2e-66
gb|KYP32050.1| Retrovirus-related Pol polyprotein from transposo...   220   3e-66
gb|PNX99755.1| copia-type polyprotein, partial [Trifolium pratense]   230   5e-66
dbj|GAU45713.1| hypothetical protein TSUD_400940 [Trifolium subt...   230   6e-66
gb|KYP42103.1| Retrovirus-related Pol polyprotein from transposo...   211   6e-66

>gb|KYP40818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 468

 Score =  247 bits (631), Expect = 1e-76
 Identities = 114/146 (78%), Positives = 129/146 (88%)
 Frame = -3

Query: 674 KDGKKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILA 495
           + GKKIGVKWIYKTK+NE G+VEK+KARLVAKGY Q +G+DYSEVFAPVARWDTIR I+A
Sbjct: 21  RGGKKIGVKWIYKTKFNEGGVVEKYKARLVAKGYAQEHGIDYSEVFAPVARWDTIRAIIA 80

Query: 494 VAVNQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRA 315
            AV  GW +YQLDVK+AFLHGDLEETV V+QPKGY +KG E KVYRLKKALYGLKQAPRA
Sbjct: 81  TAVKNGWNIYQLDVKSAFLHGDLEETVYVDQPKGYVKKGQELKVYRLKKALYGLKQAPRA 140

Query: 314 WYSRIEAYFRREGFNKCSHEHTLFTK 237
           WYS+I+ YF  EGF KC+HEHTL+TK
Sbjct: 141 WYSKIDNYFNSEGFTKCAHEHTLYTK 166



 Score =  119 bits (297), Expect = 1e-27
 Identities = 61/133 (45%), Positives = 87/133 (65%), Gaps = 7/133 (5%)
 Frame = -3

Query: 389 ERKGSEGKVYRLKKAL--YGLKQAPRAWYSRIEAYFRREGFNKCSHEHTLFTKED----- 231
           +RK + G V+ L      +  ++ P    S  EA F    +  C         E+     
Sbjct: 320 DRKSTSGYVFLLSSGAISWSSRKQPIVTLSTTEAEFVAAAYCVCQGIWIKRILEELGVKL 379

Query: 230 NKCLTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIADAL 51
            + L++LCDNSS IKLSKNPVMHGR+KHIDVRFHFLR+LCKEG+IEL++CT+++Q+AD L
Sbjct: 380 EESLSILCDNSSAIKLSKNPVMHGRSKHIDVRFHFLRNLCKEGIIELKYCTTEEQLADVL 439

Query: 50  TKPMKNDNFVKLR 12
           TK +K ++F+++R
Sbjct: 440 TKALKKESFMRIR 452


>gb|PNX57885.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 189

 Score =  235 bits (600), Expect = 2e-75
 Identities = 109/145 (75%), Positives = 124/145 (85%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           KKIGVKWIYKTKYNE G +EKHK RLVAKGY+Q YG+DY+EVFAPVARWDTIRTILA+A 
Sbjct: 42  KKIGVKWIYKTKYNEKGEIEKHKXRLVAKGYSQQYGIDYNEVFAPVARWDTIRTILAIAA 101

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
           +Q W +YQLDVK+AFLHG L E V VEQPKGY++KG   KVY+LKK LYGLKQ PRAWY+
Sbjct: 102 SQNWTIYQLDVKSAFLHGKLIENVYVEQPKGYQKKGD--KVYKLKKTLYGLKQTPRAWYN 159

Query: 305 RIEAYFRREGFNKCSHEHTLFTKED 231
           +IEAYF +E F KC HEHTLF K+D
Sbjct: 160 KIEAYFGQENFEKCPHEHTLFVKQD 184


>gb|PNX55944.1| putative LRR receptor-like protein kinase, partial [Trifolium
           pratense]
          Length = 378

 Score =  235 bits (600), Expect = 5e-73
 Identities = 121/186 (65%), Positives = 139/186 (74%), Gaps = 2/186 (1%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           KKIGVKW+YKTKYNE G VEK KARLVAKGYTQ YG+D++EVFAPVARWDTIRTILAVA 
Sbjct: 2   KKIGVKWVYKTKYNEHGEVEKLKARLVAKGYTQQYGIDFNEVFAPVARWDTIRTILAVAA 61

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
           ++GW VYQLDVK+AFLHG+L E V V+QP GY+++  +GKVYRLKKALYGLKQAPRAWYS
Sbjct: 62  SKGWPVYQLDVKSAFLHGELVENVFVDQPPGYDKQ--DGKVYRLKKALYGLKQAPRAWYS 119

Query: 305 RIEAYFRREGFNKCSHEHTLFTKEDNK--CLTVLCDNSSTIKLSKNPVMHGRTKHIDVRF 132
           +IE+YF  E F KC HEHTLF K D K   L V       I    + +M    KH   R 
Sbjct: 120 KIESYFAEEKFEKCPHEHTLFMKFDGKGNMLIVSIYVDDLIYTGSSALMFEEFKHSMERK 179

Query: 131 HFLRDL 114
             + DL
Sbjct: 180 FSMTDL 185


>gb|PNX60432.1| putative LRR receptor-like protein kinase [Trifolium pratense]
          Length = 199

 Score =  221 bits (563), Expect = 9e-70
 Identities = 104/145 (71%), Positives = 121/145 (83%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           KKIGVKWIYKTKYNE G +EK+KARLVAK Y+Q  G+DY+EVFAPVARWDTIRTILA+A 
Sbjct: 24  KKIGVKWIYKTKYNEQGKIEKYKARLVAKXYSQQQGIDYNEVFAPVARWDTIRTILAIAA 83

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            + W V+QLDVK+AFLHG+L E V V+QP GY++K  +  VYRLKK+LY LKQAPRAWYS
Sbjct: 84  LKNWYVFQLDVKSAFLHGELNEEVYVDQPLGYQKKNKQ-LVYRLKKSLYDLKQAPRAWYS 142

Query: 305 RIEAYFRREGFNKCSHEHTLFTKED 231
           +IEAYF  EGF KC HEHTLF K +
Sbjct: 143 KIEAYFNHEGFEKCPHEHTLFVKSE 167


>gb|PNX85850.1| hypothetical protein L195_g041924 [Trifolium pratense]
          Length = 477

 Score =  229 bits (585), Expect = 1e-69
 Identities = 107/143 (74%), Positives = 123/143 (86%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           K IG+KWI+KTK NE G VEK+KARLVAKGY+Q YGVDY+EVFAPVARWDTIR ++A+A 
Sbjct: 47  KTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAA 106

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            +GW VYQLDVK+AFLHG+L E V V+QP+GY +KG   KVYRLKKALYGLKQAPRAWYS
Sbjct: 107 QKGWSVYQLDVKSAFLHGELNEAVFVDQPQGYVKKGDTVKVYRLKKALYGLKQAPRAWYS 166

Query: 305 RIEAYFRREGFNKCSHEHTLFTK 237
           RIEAYF +EGF KC +EHTLF K
Sbjct: 167 RIEAYFIKEGFEKCPYEHTLFVK 189



 Score =  103 bits (258), Expect = 4e-22
 Identities = 50/72 (69%), Positives = 57/72 (79%)
 Frame = -3

Query: 218 TVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIADALTKPM 39
           TV CDNSS IKLSKNPV+HGR+KHIDVRFHFLRDL K+G +EL    S DQIAD +TKP+
Sbjct: 397 TVYCDNSSAIKLSKNPVLHGRSKHIDVRFHFLRDLTKDGTLELAHSNSHDQIADIMTKPL 456

Query: 38  KNDNFVKLRRCL 3
           K + F KLR  L
Sbjct: 457 KFEAFEKLRGLL 468


>gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifolium pratense]
          Length = 575

 Score =  229 bits (584), Expect = 2e-68
 Identities = 105/144 (72%), Positives = 125/144 (86%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           K IG+KWI+KTK NE G VEK+KARLVAKGY+Q YGVDY+EVFAPVARWDTIR ++A+A 
Sbjct: 115 KTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAA 174

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            +GW VYQLDVK+AFLHG+L E V V+QP+GY +KG E KVY+LK+ALYGLKQAPRAWYS
Sbjct: 175 QKGWNVYQLDVKSAFLHGELNEQVFVDQPQGYVKKGDELKVYKLKRALYGLKQAPRAWYS 234

Query: 305 RIEAYFRREGFNKCSHEHTLFTKE 234
           RIEAYF +EGF +C +EHTLF K+
Sbjct: 235 RIEAYFTKEGFERCPYEHTLFVKQ 258



 Score =  108 bits (269), Expect = 2e-23
 Identities = 64/135 (47%), Positives = 80/135 (59%), Gaps = 9/135 (6%)
 Frame = -3

Query: 389 ERKGSEGKVYRLKKAL--YGLKQAPRAWYSRIEAYFRREGFNKCSHEHTLFTKEDNKC-- 222
           +RK + G V+ L      +  K+ P    S  EA F       C+ +     +   K   
Sbjct: 443 DRKSTSGYVFMLSAGAVSWSSKKQPVVTLSTTEAEFIAAA--SCACQSIWMQRVLEKLGH 500

Query: 221 -----LTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIAD 57
                +TV CDNSSTIKLSKNPV+HGR+KHIDVRFHFLRDL K+G +EL  C SQ QIAD
Sbjct: 501 IQVGSITVYCDNSSTIKLSKNPVLHGRSKHIDVRFHFLRDLTKDGTLELVHCNSQYQIAD 560

Query: 56  ALTKPMKNDNFVKLR 12
            +TKP+K + F KLR
Sbjct: 561 IMTKPLKFEVFEKLR 575


>gb|PNX60516.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 162

 Score =  216 bits (550), Expect = 2e-68
 Identities = 100/139 (71%), Positives = 118/139 (84%)
 Frame = -3

Query: 659 IGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAVNQ 480
           IGVKWI+KTK+NE G ++KHKARLVAKGY Q +G+DY EVFAPVARWDTIR+ILA+A  +
Sbjct: 26  IGVKWIFKTKHNEKGEIDKHKARLVAKGYNQKHGIDYDEVFAPVARWDTIRSILAIATRE 85

Query: 479 GWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYSRI 300
            WKV+QLDVK+AFLHG+L E + VEQP GY+R+  + KVY+LKKALYGLKQAPRAWYS+I
Sbjct: 86  SWKVFQLDVKSAFLHGELSEDIYVEQPPGYQRE--KNKVYKLKKALYGLKQAPRAWYSKI 143

Query: 299 EAYFRREGFNKCSHEHTLF 243
           EAYF  E F KC  EHTLF
Sbjct: 144 EAYFNSEEFEKCPSEHTLF 162


>gb|PNX75114.1| putative copia-type protein [Trifolium pratense]
          Length = 401

 Score =  224 bits (570), Expect = 3e-68
 Identities = 104/145 (71%), Positives = 127/145 (87%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           KKIGVKWIYKTKYNE   +EKHKARLVAKGY+Q +G+DY+EVFAP+ARWDTIRTILA+A 
Sbjct: 24  KKIGVKWIYKTKYNEQRKIEKHKARLVAKGYSQKHGIDYNEVFAPMARWDTIRTILAIAA 83

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            + W ++QLDVK+AFLHGD++ETV VEQP GY+++  E  VYRLKK+LYGLKQA RAWYS
Sbjct: 84  AKNWCMFQLDVKSAFLHGDIDETVYVEQPLGYQKEKKE-MVYRLKKSLYGLKQAQRAWYS 142

Query: 305 RIEAYFRREGFNKCSHEHTLFTKED 231
           +IEAYF +EGF KC++EHTLF K++
Sbjct: 143 KIEAYFNKEGFVKCANEHTLFVKKE 167



 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 41/65 (63%), Positives = 51/65 (78%)
 Frame = -3

Query: 197 STIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIADALTKPMKNDNFVK 18
           STIKLS+NPVMHGR+KHIDVRFHFLRDL K+G I+L   +S +QIAD +TK +  +NF +
Sbjct: 293 STIKLSRNPVMHGRSKHIDVRFHFLRDLTKDGKIQLLHRSSFEQIADIMTKALTLENFCR 352

Query: 17  LRRCL 3
            R  L
Sbjct: 353 FRDLL 357


>gb|PNX62606.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 135

 Score =  214 bits (546), Expect = 4e-68
 Identities = 101/134 (75%), Positives = 118/134 (88%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           KKIGVKWIYKTKYNE G ++K+KARLVAKGY+Q YG+DY+EV+APVARWDTIRT+LA+A 
Sbjct: 3   KKIGVKWIYKTKYNEQGKIDKYKARLVAKGYSQQYGIDYNEVYAPVARWDTIRTLLAIAA 62

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            + W VYQLDVK+AFLHG+LEE V VEQP GY ++G + KVYRLKK+LYGLKQAPRAWYS
Sbjct: 63  ARSWYVYQLDVKSAFLHGELEEEVYVEQPLGYLKEGKD-KVYRLKKSLYGLKQAPRAWYS 121

Query: 305 RIEAYFRREGFNKC 264
           +IEAYF  EGF KC
Sbjct: 122 KIEAYFCSEGFMKC 135


>gb|KYP58220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 377

 Score =  221 bits (564), Expect = 1e-67
 Identities = 100/150 (66%), Positives = 123/150 (82%)
 Frame = -3

Query: 674 KDGKKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILA 495
           K  K +GVKW+YKTK NE G V+K KARLV KGY Q YG+DY+EVFAPVAR +T+R ++A
Sbjct: 21  KGAKVVGVKWVYKTKLNEKGEVDKFKARLVVKGYAQQYGIDYTEVFAPVARMETVRLVIA 80

Query: 494 VAVNQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRA 315
            A  +GW ++QLDVK+AFLHG+L E V VEQP+GY +KG E KVY+LKKALYGLKQAPRA
Sbjct: 81  YAAQKGWAIHQLDVKSAFLHGELAEDVFVEQPRGYVQKGKEEKVYKLKKALYGLKQAPRA 140

Query: 314 WYSRIEAYFRREGFNKCSHEHTLFTKEDNK 225
           WY+RIEAYF +EGF KC +EHTLF K++ +
Sbjct: 141 WYNRIEAYFIKEGFKKCEYEHTLFVKQNKR 170


>dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subterraneum]
          Length = 1103

 Score =  233 bits (595), Expect = 3e-67
 Identities = 108/147 (73%), Positives = 125/147 (85%)
 Frame = -3

Query: 665  KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
            K IGVKWIYKTK NE G +EK+KARLVAKGY Q YG DY EVFAPVARWDTIR++LA++ 
Sbjct: 859  KVIGVKWIYKTKLNEKGEIEKYKARLVAKGYAQRYGTDYKEVFAPVARWDTIRSLLAISA 918

Query: 485  NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            ++GW VYQLDVK+AFLHG+L+ETV VEQP GY + G E KVY+L KALYGLKQAPRAWYS
Sbjct: 919  SRGWNVYQLDVKSAFLHGELKETVYVEQPAGYVKSGKEDKVYKLHKALYGLKQAPRAWYS 978

Query: 305  RIEAYFRREGFNKCSHEHTLFTKEDNK 225
            +IEAYF +EGF KC HEHTLF K ++K
Sbjct: 979  KIEAYFIKEGFVKCPHEHTLFVKREDK 1005


>gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense]
          Length = 538

 Score =  225 bits (573), Expect = 3e-67
 Identities = 113/179 (63%), Positives = 136/179 (75%), Gaps = 11/179 (6%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           KKIGVKW+YKTK NE G V+K+KARLVAKGY Q +GVDY+EVFAPVAR DT+R I+A+A 
Sbjct: 66  KKIGVKWVYKTKLNENGEVDKYKARLVAKGYAQQFGVDYTEVFAPVARMDTVRMIVALAA 125

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            +GW +YQLDVK+AFLHG+L E V VEQP+GYE+K S  KVY+LKKALYGLKQAPR+W+S
Sbjct: 126 QRGWIIYQLDVKSAFLHGELNEDVFVEQPRGYEKKDSPNKVYKLKKALYGLKQAPRSWFS 185

Query: 305 RIEAYFRREGFNKCSHEHTLFTK--EDNKCLTVLC---------DNSSTIKLSKNPVMH 162
           RIEAYF +EGF KC  EHTLF K  ++ K L V           D+ S  +  KN +MH
Sbjct: 186 RIEAYFVKEGFLKCHSEHTLFVKISKEGKILIVSIYVDDLIFTGDDESMFEDFKNSMMH 244



 Score =  113 bits (283), Expect = 2e-25
 Identities = 65/143 (45%), Positives = 83/143 (58%), Gaps = 14/143 (9%)
 Frame = -3

Query: 389 ERKGSEGKVYRLKKAL--YGLKQAPRAWYSRIEAYF------------RREGFNKCSHEH 252
           +RK + G V+ +      +  K+ P    S  EA F             R   +K  H  
Sbjct: 394 DRKSTSGYVFLMSSGAVSWSSKKQPIVTLSTTEAEFVAAAYCASQIVWMRRILDKLGHSQ 453

Query: 251 TLFTKEDNKCLTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQ 72
           +  T        + CDNSSTIKLSKNPV+HGR KHIDVRFHFLRDL KEG++EL FC +Q
Sbjct: 454 SGST-------VMFCDNSSTIKLSKNPVLHGRCKHIDVRFHFLRDLTKEGIVELVFCGTQ 506

Query: 71  DQIADALTKPMKNDNFVKLRRCL 3
           +Q+AD +TKP+K D F+KLR  L
Sbjct: 507 EQVADVMTKPLKLDIFLKLRSLL 529


>dbj|GAU31929.1| hypothetical protein TSUD_271130, partial [Trifolium subterraneum]
          Length = 541

 Score =  225 bits (573), Expect = 4e-67
 Identities = 108/151 (71%), Positives = 125/151 (82%), Gaps = 2/151 (1%)
 Frame = -3

Query: 659 IGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAVNQ 480
           IGVKW+YKTKYNE G +EKHKARLVAKGY+Q +G+DY EVFAPVARWDTIR ILA+A  +
Sbjct: 66  IGVKWVYKTKYNEKGEIEKHKARLVAKGYSQKHGIDYDEVFAPVARWDTIRAILALAAKE 125

Query: 479 GWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYSRI 300
            WKV+QLDVK+AFLHG+L E + VEQP GY+ KG++  VY+LKKALYGLKQAP AWYS+I
Sbjct: 126 NWKVFQLDVKSAFLHGELTEDIYVEQPPGYQ-KGNKDMVYKLKKALYGLKQAPMAWYSKI 184

Query: 299 EAYFRREGFNKCSHEHTLFTK--EDNKCLTV 213
           EAYF  E F KCSHEHTLF K   +NK L V
Sbjct: 185 EAYFTVEQFKKCSHEHTLFVKYGSNNKILIV 215



 Score =  105 bits (261), Expect = 2e-22
 Identities = 59/138 (42%), Positives = 81/138 (58%), Gaps = 9/138 (6%)
 Frame = -3

Query: 389 ERKGSEGKVYRLKKAL--YGLKQAPRAWYSRIEAYFRREGFNKCSH-------EHTLFTK 237
           +RK + G V+ L      +  K+ P    S  EA +       C          H   T 
Sbjct: 393 DRKNTSGYVFMLGTGAISWSSKKQPILTLSTTEAEYVAAAVCACQCIWLKNVLNHLQITH 452

Query: 236 EDNKCLTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIAD 57
             N  + + CDNSS+IKLSKNP+MHGR KHIDVRFHF R+L K+G++EL+ C SQ+Q+AD
Sbjct: 453 --NNGIVIYCDNSSSIKLSKNPIMHGRCKHIDVRFHFPRNLTKDGIVELKHCKSQEQLAD 510

Query: 56  ALTKPMKNDNFVKLRRCL 3
            +TKP+K + F+KL+  L
Sbjct: 511 LMTKPLKLEAFLKLKEGL 528


>gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 610

 Score =  226 bits (575), Expect = 8e-67
 Identities = 107/153 (69%), Positives = 124/153 (81%), Gaps = 2/153 (1%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           K IGVKW++KTKYNE G V+K KARLVAKGY Q +G+DY+EV+APVARWDTIR I+A+A 
Sbjct: 138 KTIGVKWVFKTKYNEKGEVDKCKARLVAKGYAQRFGIDYTEVYAPVARWDTIRMIIALAA 197

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
            + W +YQLDVK+AFLHG+L E V VEQP+G+E KG E KVY+LKKALYGLKQAPRAWYS
Sbjct: 198 QKNWSIYQLDVKSAFLHGELTEAVFVEQPQGFEVKGGENKVYKLKKALYGLKQAPRAWYS 257

Query: 305 RIEAYFRREGFNKCSHEHTLFTK--EDNKCLTV 213
           RIE YF +EGF KC  EHTLF K     KCL V
Sbjct: 258 RIENYFVKEGFEKCDFEHTLFIKMGAGGKCLIV 290



 Score =  109 bits (272), Expect = 9e-24
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = -3

Query: 230 NKCLTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIADAL 51
           N  + + CDNSSTIKLSKNPV+HGR+KHIDVRFHFLRDL ++G ++L  C S+DQ+AD +
Sbjct: 526 NCSVIIKCDNSSTIKLSKNPVLHGRSKHIDVRFHFLRDLTRDGKVKLVHCGSKDQVADIM 585

Query: 50  TKPMKNDNFVKLRRCL 3
           TKP+K D FVKLR  L
Sbjct: 586 TKPLKLDEFVKLRELL 601


>dbj|GAU46899.1| hypothetical protein TSUD_296780 [Trifolium subterraneum]
          Length = 1064

 Score =  232 bits (591), Expect = 9e-67
 Identities = 116/177 (65%), Positives = 136/177 (76%), Gaps = 2/177 (1%)
 Frame = -3

Query: 674  KDGKKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILA 495
            K  KKIGVKWIYKTK+NE G V+KHKARLVAKGYTQ +G+D++EVFAPVARWDTIRTILA
Sbjct: 694  KGVKKIGVKWIYKTKFNENGEVDKHKARLVAKGYTQQHGIDFNEVFAPVARWDTIRTILA 753

Query: 494  VAVNQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRA 315
            +A ++GW VYQLDVK+A LHGDL E V V+QP GY ++   GKVY+L+KALYGLKQAPRA
Sbjct: 754  IAPSKGWTVYQLDVKSALLHGDLVENVYVDQPPGYNKE--IGKVYKLRKALYGLKQAPRA 811

Query: 314  WYSRIEAYFRREGFNKCSHEHTLFTKEDNK--CLTVLCDNSSTIKLSKNPVMHGRTK 150
            WYS+I++YF +E F KC HEHTLF K+D K   L V       I    N VM G  K
Sbjct: 812  WYSKIKSYFNQEKFEKCPHEHTLFVKQDKKGNVLIVSLYVDDLIYTGNNEVMFGEFK 868



 Score =  104 bits (260), Expect = 4e-22
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = -3

Query: 239  KEDNKCLTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIA 60
            ++   C+ + CDNSS+IKLSKNPVMHGR KHID R+HFLRDL KE ++EL +C +QDQ+A
Sbjct: 978  RQKQGCIKIHCDNSSSIKLSKNPVMHGRCKHIDARYHFLRDLTKENVVELVYCNTQDQVA 1037

Query: 59   DALTKPMKNDNFVKLRRCL 3
            D +TK +K + F K R  L
Sbjct: 1038 DVMTKALKLEAFCKFRDML 1056


>emb|CAN67886.1| hypothetical protein VITISV_042574 [Vitis vinifera]
          Length = 439

 Score =  220 bits (561), Expect = 2e-66
 Identities = 102/143 (71%), Positives = 117/143 (81%)
 Frame = -3

Query: 665 KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
           KKIGVKW++KTK NE G V+K KARLVAKGY Q  G+DY+EVFAPVARWDTIR +LA+A 
Sbjct: 103 KKIGVKWVFKTKLNEKGEVDKCKARLVAKGYAQRQGIDYNEVFAPVARWDTIRMVLALAA 162

Query: 485 NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
             GW VYQLD+K+AF HG+L+E V VEQP GY RKG E KVY+ KK LYGLKQAPRAWYS
Sbjct: 163 QNGWSVYQLDIKSAFFHGELKEDVYVEQPLGYIRKGEEEKVYKFKKTLYGLKQAPRAWYS 222

Query: 305 RIEAYFRREGFNKCSHEHTLFTK 237
           +IEAYF  EGF +C +EHTLF K
Sbjct: 223 KIEAYFVNEGFERCDYEHTLFVK 245



 Score =  101 bits (251), Expect = 3e-21
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = -3

Query: 230 NKCLTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIADAL 51
           +KC T++ DN+STIKLSKN VMHGR+KHIDVRFHFLRDL KE +++L  C + DQ+ D L
Sbjct: 355 SKCTTIMSDNNSTIKLSKNLVMHGRSKHIDVRFHFLRDLTKEEVVKLVHCGTNDQVVDIL 414

Query: 50  TKPMKNDNFVKLRRCL 3
           TKP+K + F+ LR  L
Sbjct: 415 TKPLKLEVFLNLREKL 430


>gb|KYP32050.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 444

 Score =  220 bits (560), Expect = 3e-66
 Identities = 103/162 (63%), Positives = 129/162 (79%)
 Frame = -3

Query: 659 IGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAVNQ 480
           IGVKW+YKTK NE G VEKHKARLVAKGY+Q YGVDY+EVFAPVAR DT+R +LA+A   
Sbjct: 26  IGVKWVYKTKLNERGNVEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTVRVLLALAAQH 85

Query: 479 GWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYSRI 300
            W+V+QLDVK+AFLHG+L+E V V+QP+G+ +KG E KVYRLKKALYGLKQAP+AWY++I
Sbjct: 86  RWEVFQLDVKSAFLHGELKEEVYVQQPEGFVKKGKEDKVYRLKKALYGLKQAPKAWYNKI 145

Query: 299 EAYFRREGFNKCSHEHTLFTKEDNKCLTVLCDNSSTIKLSKN 174
           E YF +E F KC  EHTLFTK++   + ++      +  S+N
Sbjct: 146 ETYFAKENFEKCPSEHTLFTKKNEGNILIVSLYVDDLIFSRN 187


>gb|PNX99755.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1209

 Score =  230 bits (587), Expect = 5e-66
 Identities = 111/150 (74%), Positives = 126/150 (84%)
 Frame = -3

Query: 674  KDGKKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILA 495
            K  KKIGVKW+YKTKYNE G VEK KARLVAKGYTQ YGVD++EVFAPVARWDTIR ILA
Sbjct: 830  KGVKKIGVKWVYKTKYNEHGEVEKLKARLVAKGYTQQYGVDFNEVFAPVARWDTIRAILA 889

Query: 494  VAVNQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRA 315
            VA ++GW V QLDVK+AFLHG+L E V V+QP GY+++  +GKVY+LKKALYGLKQAPRA
Sbjct: 890  VAASKGWPVNQLDVKSAFLHGELVENVFVDQPPGYDKQ--DGKVYKLKKALYGLKQAPRA 947

Query: 314  WYSRIEAYFRREGFNKCSHEHTLFTKEDNK 225
            WYS+IE+YF  E F KC HEHTLF K D K
Sbjct: 948  WYSKIESYFTEENFEKCPHEHTLFMKYDGK 977


>dbj|GAU45713.1| hypothetical protein TSUD_400940 [Trifolium subterraneum]
          Length = 1111

 Score =  230 bits (586), Expect = 6e-66
 Identities = 107/147 (72%), Positives = 126/147 (85%)
 Frame = -3

Query: 665  KKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILAVAV 486
            KKIGVKWIYKTKYNE G +EKHKARLVAKGY+Q +G+DY+EVFAPVARWDTIR+ILA+A 
Sbjct: 708  KKIGVKWIYKTKYNEQGKIEKHKARLVAKGYSQQHGIDYNEVFAPVARWDTIRSILAIAA 767

Query: 485  NQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRAWYS 306
             +GW +YQLDVK+AFLHG+L E V VEQP GY+++  E  VY+LKK+LYGLKQAPRAWYS
Sbjct: 768  LRGWYIYQLDVKSAFLHGELNEEVYVEQPLGYQKETKE-IVYKLKKSLYGLKQAPRAWYS 826

Query: 305  RIEAYFRREGFNKCSHEHTLFTKEDNK 225
            +IE+YF  EGF KC HEHTLF K D +
Sbjct: 827  KIESYFCHEGFEKCPHEHTLFVKHDKE 853



 Score =  106 bits (265), Expect = 9e-23
 Identities = 45/76 (59%), Positives = 63/76 (82%)
 Frame = -3

Query: 239  KEDNKCLTVLCDNSSTIKLSKNPVMHGRTKHIDVRFHFLRDLCKEGLIELQFCTSQDQIA 60
            K    C+T+ CDNSS+IKLS+NPVMHGR+KH+DVRFHFLRDL K+G+I+L+ C+S +Q+A
Sbjct: 1024 KRKEHCITIYCDNSSSIKLSRNPVMHGRSKHVDVRFHFLRDLTKDGVIQLKHCSSFEQVA 1083

Query: 59   DALTKPMKNDNFVKLR 12
            D +TK +  ++F K+R
Sbjct: 1084 DIITKALSLESFCKIR 1099


>gb|KYP42103.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 202

 Score =  211 bits (538), Expect = 6e-66
 Identities = 99/146 (67%), Positives = 117/146 (80%)
 Frame = -3

Query: 674 KDGKKIGVKWIYKTKYNEVGMVEKHKARLVAKGYTQVYGVDYSEVFAPVARWDTIRTILA 495
           K  K +GVKW+YKTK NE G V+K KARLV KGY Q YG+DY+EVFAPVAR DT+R ++A
Sbjct: 54  KGVKTVGVKWVYKTKLNEKGEVDKFKARLVVKGYAQQYGIDYTEVFAPVARMDTVRLVIA 113

Query: 494 VAVNQGWKVYQLDVKNAFLHGDLEETVLVEQPKGYERKGSEGKVYRLKKALYGLKQAPRA 315
           +A  +GW ++QLDVK+AFLH +L E V VEQP GY +KG E KVY+LKKALYGLKQAP A
Sbjct: 114 LATQKGWVIHQLDVKSAFLHEELVEDVFVEQPCGYIQKGKEEKVYKLKKALYGLKQAPCA 173

Query: 314 WYSRIEAYFRREGFNKCSHEHTLFTK 237
           WYSRIEAYF +E F KC +EHTLF K
Sbjct: 174 WYSRIEAYFMKENFQKCDYEHTLFVK 199