BLASTX nr result

ID: Astragalus22_contig00036626 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00036626
         (656 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013452568.1| animal RPA1 domain protein [Medicago truncat...    43   9e-06

>ref|XP_013452568.1| animal RPA1 domain protein [Medicago truncatula]
 gb|KEH26596.1| animal RPA1 domain protein [Medicago truncatula]
          Length = 172

 Score = 43.1 bits (100), Expect(2) = 9e-06
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +3

Query: 135 YLISTK*H*VQNTSHKYKLNFMRTTRVTNISAEDTPLYHFDFSEF 269
           +++ +  H  + T HKYKLNFM  T V  +S+ + P +HF F  F
Sbjct: 77  FMVGSNDHAYKTTGHKYKLNFMGGTNVFRVSSVNIPAHHFTFMPF 121



 Score = 34.7 bits (78), Expect(2) = 9e-06
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 377 FIFSHYFSNDSQYRYT*FTDAIGHVVQKDTLKEKEKDGR 493
           F F  +    S  R     D IGHVV+KD +KE EK+G+
Sbjct: 116 FTFMPFMQIVSATREDKLLDVIGHVVEKDVIKETEKNGK 154


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