BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00035726
         (417 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]            95   9e-24
gb|PNY10278.1| ribonuclease H [Trifolium pratense]                     95   9e-24
gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense]            95   2e-23
dbj|GAU16651.1| hypothetical protein TSUD_326010 [Trifolium subt...    97   9e-21
gb|PNY12420.1| ribonuclease H [Trifolium pratense]                     94   4e-20
dbj|GAU31120.1| hypothetical protein TSUD_212270 [Trifolium subt...    77   4e-20
gb|PNY01766.1| ribonuclease H [Trifolium pratense]                     93   4e-20
dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subt...    87   6e-20
dbj|GAU43243.1| hypothetical protein TSUD_241340 [Trifolium subt...    93   1e-19
gb|PNY15946.1| ribonuclease H, partial [Trifolium pratense]            91   2e-19
gb|PNY05394.1| ribonuclease H [Trifolium pratense]                     86   2e-19
gb|PNY03121.1| ribonuclease H, partial [Trifolium pratense]            90   2e-19
dbj|GAU50328.1| hypothetical protein TSUD_290640 [Trifolium subt...    92   2e-19
dbj|GAU26489.1| hypothetical protein TSUD_361220 [Trifolium subt...    87   3e-19
dbj|GAU43930.1| hypothetical protein TSUD_28720 [Trifolium subte...    92   6e-19
gb|PNX88162.1| hypothetical protein L195_g044263 [Trifolium prat...    91   1e-18
gb|PNX81608.1| ribonuclease H [Trifolium pratense]                     83   2e-18
gb|PNY08933.1| ribonuclease H [Trifolium pratense]                     77   2e-18
gb|PNY15776.1| ribonuclease H [Trifolium pratense]                     75   8e-18
gb|PNX95881.1| ribonuclease H, partial [Trifolium pratense]            88   1e-17

>gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1770

 Score = 95.1 bits (235), Expect(2) = 9e-24
 Identities = 39/94 (41%), Positives = 59/94 (62%)
 Frame = -2

Query: 284  WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
            W  +WK++  ERV  F+WLL++ ++LT +R + M  G+PFC  C DE+ET LHV+RDC  
Sbjct: 1550 WNIVWKIQACERVRAFVWLLKHGRMLTHYRMSKMNLGLPFCTFCEDEIETELHVLRDCSK 1609

Query: 104  AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
            +  VW+N V   +   FF  D   W++ NL  ++
Sbjct: 1610 SMQVWLNIVHDSSREVFFNADFQQWINMNLHGDI 1643



 Score = 42.7 bits (99), Expect(2) = 9e-24
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 417  AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMH 298
            A+ PP+    DD   WP   HGNF+VA+ YN+L      H
Sbjct: 1506 AIPPPEDAQDDDINYWPAGKHGNFTVASAYNILADINCQH 1545


>gb|PNY10278.1| ribonuclease H [Trifolium pratense]
          Length = 374

 Score = 95.1 bits (235), Expect(2) = 9e-24
 Identities = 39/94 (41%), Positives = 59/94 (62%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W  +WK++  ERV  F+WLL++ ++LT +R + M  G+PFC  C DE+ET LHV+RDC  
Sbjct: 175 WNIVWKIQACERVRAFVWLLKHGRMLTHYRMSKMNLGLPFCTFCEDEIETELHVLRDCSK 234

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
           +  VW+N V   +   FF  D   W++ NL  ++
Sbjct: 235 SMQVWLNIVHDSSREVFFNADFQQWINMNLHGDI 268



 Score = 42.7 bits (99), Expect(2) = 9e-24
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMH 298
           A+ PP+    DD   WP   HGNF+VA+ YN+L      H
Sbjct: 131 AIPPPEDAQDDDINYWPAGKHGNFTVASAYNILADINCQH 170


>gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1220

 Score = 95.1 bits (235), Expect(2) = 2e-23
 Identities = 43/94 (45%), Positives = 63/94 (67%)
 Frame = -2

Query: 284  WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
            W  IWKL+V ER+ +F+WL+R+D+L+T++RK  M  G P+C  C D  E TLHV+RDCP 
Sbjct: 1070 WLRIWKLKVPERIRNFIWLVRHDRLITNYRKNKMHIGEPWCTHCVDIXEDTLHVLRDCPL 1129

Query: 104  AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
            A +VW N + + A  +FF  +  TW+  NL  ++
Sbjct: 1130 AKSVWCNLLNNAAREKFFAAELKTWIHMNLQQDL 1163



 Score = 42.0 bits (97), Expect(2) = 2e-23
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -1

Query: 417  AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEG 304
            A+ PP +    D  +W G  +G FS+A+ YNL+C F G
Sbjct: 1026 ALLPPQNDGESDKRVWSGTDNGQFSIASAYNLVCNFSG 1063


>dbj|GAU16651.1| hypothetical protein TSUD_326010 [Trifolium subterraneum]
          Length = 826

 Score = 96.7 bits (239), Expect(2) = 9e-21
 Identities = 45/92 (48%), Positives = 58/92 (63%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W  IWKL V ERV   +WLL +D+ LT++ K  M  G   C+ CGD +ET LHV RDCP 
Sbjct: 576 WIKIWKLGVPERVRTLVWLLTHDRFLTNYNKHRMGLGTALCSFCGD-IETALHVFRDCPK 634

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLSH 9
           A  VW+N VP +A  +FF  D   W++YNL +
Sbjct: 635 AMQVWLNVVPQEARQKFFHEDLSGWINYNLDY 666



 Score = 31.2 bits (69), Expect(2) = 9e-21
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMHADSVLEEYLEIG 262
           A  PP+     D  I  G    NFSVA  Y++LC  +    D+   +  ++G
Sbjct: 532 ASLPPNDAYGKDEFIVAGADASNFSVAAKYSILCNHDSSPTDAAWIKIWKLG 583


>gb|PNY12420.1| ribonuclease H [Trifolium pratense]
          Length = 1341

 Score = 94.4 bits (233), Expect(2) = 4e-20
 Identities = 43/94 (45%), Positives = 59/94 (62%)
 Frame = -2

Query: 284  WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
            W  IWKL+V ERV  F+WLL +D+LLT+  K+ M  G   C  CGD +ET +HVMRDCP 
Sbjct: 1010 WNMIWKLQVPERVRAFVWLLMHDRLLTNSTKSSMGLGHAMCNYCGDVVETAIHVMRDCPK 1069

Query: 104  AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
            A  +W+  VP++    F   +   WV +NL ++V
Sbjct: 1070 AMQIWVTVVPANDRGSFLMGNVKNWVCFNLQNSV 1103



 Score = 31.2 bits (69), Expect(2) = 4e-20
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 417  AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMHADS 289
            A+ PP      D  +  G S  +FSV++ YN LC F G  +DS
Sbjct: 966  AILPPMEEYGCDERLGVGGSKYSFSVSSMYNNLCDFHGNESDS 1008


>dbj|GAU31120.1| hypothetical protein TSUD_212270 [Trifolium subterraneum]
          Length = 347

 Score = 76.6 bits (187), Expect(2) = 4e-20
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQ--HGIPFCALCGDEMETTLHVMRDC 111
           W +IWK+EV ERV +F+W LR  +L T+  KAC    HG P+C  C    E+ +HV+RDC
Sbjct: 51  WNNIWKMEVPERVRYFIWRLRYGRLPTN--KACHPWGHGAPYCGHCVGVEESIIHVLRDC 108

Query: 110 PNAWAVWINSVPSDAICQFFEMDSVTWVDYNL 15
           P A  VW + +P      FF     +W  +N+
Sbjct: 109 PLAHDVWNHLLPMQTRLGFFTCHYHSWFQHNM 140



 Score = 48.9 bits (115), Expect(2) = 4e-20
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMHADSV 286
           A+ PP + D DD  IWPG   G F++A+ YNLLCG+  +  D +
Sbjct: 7   ALPPPQNTDEDDERIWPGDRLGRFTIASAYNLLCGYCELAVDDM 50


>gb|PNY01766.1| ribonuclease H [Trifolium pratense]
          Length = 300

 Score = 93.2 bits (230), Expect = 4e-20
 Identities = 39/91 (42%), Positives = 58/91 (63%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W  +WK+EV ER+  F+WL+++D+LLT +R   +  G P+C  CG+ METTL V+RDCP 
Sbjct: 5   WDKVWKIEVPERIPSFVWLIKHDRLLTRYRLNYVHIGEPYCYRCGNVMETTLRVLRDCPL 64

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLS 12
           A  +W+N+V       FF +D   W+  N +
Sbjct: 65  AMVIWLNAVNLQQCEAFFTVDLSDWIKINFN 95


>dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subterraneum]
          Length = 642

 Score = 87.4 bits (215), Expect(2) = 6e-20
 Identities = 41/90 (45%), Positives = 58/90 (64%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W  IW+L+V ERV  F+WL+R+D+LLT++RK+ MQ   P+C  C D +E T+HV+RDCP 
Sbjct: 315 WLHIWRLKVPERVRSFVWLVRHDRLLTNYRKSKMQLCEPWCNHCIDIVEDTMHVLRDCPL 374

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNL 15
           A  VW N +   A   F+  +   W+  NL
Sbjct: 375 AKVVWSNLLNDTARYSFYHTNLEDWICMNL 404



 Score = 37.7 bits (86), Expect(2) = 6e-20
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGF 310
           A+ PP++    D   W G S G+F++A+ Y LLC F
Sbjct: 271 AIVPPNNNSEADRRAWSGSSDGSFTIASAYTLLCRF 306


>dbj|GAU43243.1| hypothetical protein TSUD_241340 [Trifolium subterraneum]
          Length = 371

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 40/92 (43%), Positives = 58/92 (63%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W+ IW+L+V ERV  F+WL+R+++LLT+ +K  M  G   C  CG  +E TLH +RDCP 
Sbjct: 140 WKDIWRLKVPERVRTFIWLMRHNRLLTNEKKHKMGLGSAMCDYCGSIIEDTLHALRDCPQ 199

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLSH 9
              +W+N V   A   FF  D   W++YN+S+
Sbjct: 200 TMPIWLNLVNEHARANFFNGDLFYWINYNMSN 231


>gb|PNY15946.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1195

 Score = 91.3 bits (225), Expect(2) = 2e-19
 Identities = 35/91 (38%), Positives = 60/91 (65%)
 Frame = -2

Query: 284  WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
            W  IW++ V ER+  F+WL++++++LT++RK+ M  G P+C  C DE+E  LH++RDCP 
Sbjct: 1008 WAKIWRITVAERIRSFIWLVKHNRILTNYRKSKMNLGGPWCNHCVDEIEDVLHILRDCPL 1067

Query: 104  AWAVWINSVPSDAICQFFEMDSVTWVDYNLS 12
            A A+W N +  +    FF +    W+ +N++
Sbjct: 1068 AKAIWCNVLRMEVRTTFFNLQHQEWITFNIT 1098



 Score = 32.3 bits (72), Expect(2) = 2e-19
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 417  AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMHADSV 286
            A+ PP   +  D   W G  +G FSV++ Y ++C F     D++
Sbjct: 964  AILPPTDDNGMDQRGWKGDKNGEFSVSSAYLMICNFTENFDDTI 1007


>gb|PNY05394.1| ribonuclease H [Trifolium pratense]
          Length = 675

 Score = 85.9 bits (211), Expect(2) = 2e-19
 Identities = 39/96 (40%), Positives = 61/96 (63%)
 Frame = -2

Query: 290 VCWRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDC 111
           V WR IW+L+V+ERV  F+WL+R+D+L+T++RK+ M    P+C  C   +E T+HV+RD 
Sbjct: 376 VVWRRIWRLQVLERVRSFIWLVRHDRLITNYRKSKMHICAPWCKHCVKAIEDTMHVLRDF 435

Query: 110 PNAWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
           P A  VW N + S     F+  +   W+  NL+ ++
Sbjct: 436 PLAKVVWCNLMNSAVGDIFYAANLEDWITLNLNQDL 471



 Score = 37.7 bits (86), Expect(2) = 2e-19
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMHADSV 286
           A+ PP++    D   W G   GNFS+A+ Y +LC       D V
Sbjct: 334 AIVPPNNASAADMRAWRGTMDGNFSIASAYTMLCNLNDDEWDVV 377


>gb|PNY03121.1| ribonuclease H, partial [Trifolium pratense]
          Length = 952

 Score = 90.1 bits (222), Expect(2) = 2e-19
 Identities = 44/94 (46%), Positives = 56/94 (59%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W SIWKL+V ERV  F+WLL +D+LLT+  K  M      C  CGD  ETTLHVMRDCP 
Sbjct: 642 WTSIWKLKVPERVRAFVWLLTHDRLLTNSLKRNMGLSHAMCHYCGDVEETTLHVMRDCPK 701

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
           A  +W   +P     ++   D   WV YNL +++
Sbjct: 702 AMEIWAVVIPVQEKGKYMIGDLKQWVCYNLQNSI 735



 Score = 33.1 bits (74), Expect(2) = 2e-19
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMHADSVLEEYLEI 265
           A+ PP+     D  I  G S  +FSVA+ YN +CGF   H+D+ +  +  I
Sbjct: 598 AILPPNEEHGRDERIGVGGSTCDFSVASMYNNICGF---HSDATVGMWTSI 645


>dbj|GAU50328.1| hypothetical protein TSUD_290640 [Trifolium subterraneum]
          Length = 474

 Score = 92.0 bits (227), Expect(2) = 2e-19
 Identities = 42/94 (44%), Positives = 62/94 (65%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W  IWKL+V ER++ F+WL+R+D+LLT++RK+ M  G P+C  C D +E TLHV+RDCP 
Sbjct: 198 WLRIWKLKVPERITSFIWLVRHDRLLTNYRKSKMHIGEPWCTHCVDIVEDTLHVLRDCPL 257

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
           A +VW N + + A    F  +   W+  NL  ++
Sbjct: 258 AKSVWCNLLNNAARENSFAAELKDWIHMNLQQDL 291



 Score = 31.2 bits (69), Expect(2) = 2e-19
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGF 310
           A+ PP +    D  +  G  +G FS+A+ Y L+C F
Sbjct: 154 ALLPPQNDGDTDRRVCSGTDNGQFSIASAYKLVCNF 189


>dbj|GAU26489.1| hypothetical protein TSUD_361220 [Trifolium subterraneum]
          Length = 577

 Score = 87.4 bits (215), Expect(2) = 3e-19
 Identities = 39/94 (41%), Positives = 59/94 (62%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W+ +WKL V ERV  F+WL+ +D+LLT+ RKA M      C  CG+  ET +H +RDC  
Sbjct: 388 WKLLWKLHVTERVKCFIWLVSHDRLLTNSRKAMMGLCHAMCTFCGNMEETCIHALRDCTI 447

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
              +W++ VP ++   FF  D  +W++YNLS ++
Sbjct: 448 VRNMWLSVVPCESRGLFFGGDLDSWINYNLSSDI 481



 Score = 35.4 bits (80), Expect(2) = 3e-19
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMH 298
           A+ PP  ++ DD  +  G     FSV+  Y++LCGF+  +
Sbjct: 344 AILPPSDVNGDDQQLGSGTGSKKFSVSDMYSVLCGFDNYY 383


>dbj|GAU43930.1| hypothetical protein TSUD_28720 [Trifolium subterraneum]
          Length = 432

 Score = 91.7 bits (226), Expect = 6e-19
 Identities = 44/97 (45%), Positives = 59/97 (60%)
 Frame = -2

Query: 299 MLIVCWRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVM 120
           ++   W  IWKL V ERV   +WLL +D+LLT++ K  M  G   C+ C D +ET LHV 
Sbjct: 170 LMDAAWIKIWKLGVPERVRTLVWLLTHDRLLTNYNKHRMGLGTALCSFCRD-IETALHVF 228

Query: 119 RDCPNAWAVWINSVPSDAICQFFEMDSVTWVDYNLSH 9
           RDCP A  VW+N V  +A  +FF  D   W++YNL +
Sbjct: 229 RDCPKAMQVWLNVVLQEARQKFFHEDLSGWINYNLDY 265


>gb|PNX88162.1| hypothetical protein L195_g044263 [Trifolium pratense]
          Length = 414

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 40/94 (42%), Positives = 62/94 (65%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W+ IWK++V ERV  F+WL+ ++++LT+++K  M  G   C  CGD++ET LHVMRDCP 
Sbjct: 233 WKHIWKIKVQERVRVFVWLMYHERILTNYQKNRMGLGSSMCDFCGDQVETILHVMRDCPL 292

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
              +W+N V S+    F    +  W+D+NL+ +V
Sbjct: 293 VMPLWLNLVHSNMRRNFCTGYTQQWIDFNLNVDV 326


>gb|PNX81608.1| ribonuclease H [Trifolium pratense]
          Length = 630

 Score = 82.8 bits (203), Expect(2) = 2e-18
 Identities = 38/90 (42%), Positives = 55/90 (61%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W  IW+L V ER+  F+W++R+D+LLT++RK+ M    P+C  C D +E TLHV+RDCP 
Sbjct: 299 WLQIWRLRVPERIRTFIWIIRHDRLLTNYRKSKMHISEPWCNHCVDVVEDTLHVLRDCPL 358

Query: 104 AWAVWINSVPSDAICQFFEMDSVTWVDYNL 15
           A +VW N +       FF      W+  N+
Sbjct: 359 AKSVWCNLLNGKDKDWFFTAALDEWIILNM 388



 Score = 37.4 bits (85), Expect(2) = 2e-18
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGF 310
           A+  P S   +D + W G ++G FS+A+ Y LLC F
Sbjct: 255 AIMAPSSDSNEDMMAWSGTANGEFSIASAYTLLCRF 290


>gb|PNY08933.1| ribonuclease H [Trifolium pratense]
          Length = 260

 Score = 76.6 bits (187), Expect(2) = 2e-18
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = -2

Query: 284 WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
           W  IW L V ER+  F+WL+R D LLT++ K  M +G P+C  C D +E TLHV+RDCP 
Sbjct: 76  WLRIWMLRVPERIKTFIWLIRQDSLLTNYWKNKMHNGEPWCNHCVDVVEDTLHVLRDCPL 135

Query: 104 AWAVW 90
           A +VW
Sbjct: 136 AKSVW 140



 Score = 43.1 bits (100), Expect(2) = 2e-18
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = -1

Query: 417 AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGF 310
           A+ PP +   DD V W G S G+FS+A+ Y LLC F
Sbjct: 32  AIMPPSNDSNDDKVAWSGTSDGDFSIASAYTLLCQF 67


>gb|PNY15776.1| ribonuclease H [Trifolium pratense]
          Length = 1171

 Score = 74.7 bits (182), Expect(2) = 8e-18
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = -2

Query: 284  WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQ--HGIPFCALCGDEMETTLHVMRDC 111
            W +IWK+EV ER+ +F+W LR  +L T+  KAC +  HG P+C  C    E+ +HV+RDC
Sbjct: 1039 WNNIWKMEVPERIRYFIWRLRYGRLPTN--KACHRWGHGAPYCGHCVGVEESIIHVLRDC 1096

Query: 110  PNAWAVWINSVPSDAICQFFEMDSVTWVDYNL 15
            P A  +W + +P      FF     +W   N+
Sbjct: 1097 PLAHHIWNHLLPMQKRLAFFTCHYHSWFHNNM 1128



 Score = 43.1 bits (100), Expect(2) = 8e-18
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = -1

Query: 417  AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEGMHADSV 286
            A+ PP + D +D  IWPG   G F++A+ YNLL G   +  D++
Sbjct: 995  ALPPPQNTDGNDERIWPGDRLGRFTIASAYNLLRGHRELEVDNM 1038


>gb|PNX95881.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1157

 Score = 88.2 bits (217), Expect(2) = 1e-17
 Identities = 39/94 (41%), Positives = 56/94 (59%)
 Frame = -2

Query: 284  WRSIWKLEVIERVSHFMWLLRNDKLLTDFRKACMQHGIPFCALCGDEMETTLHVMRDCPN 105
            WR IW+L V ERV  FMW++ + ++LT+  K+ M      C LCGD  ET +HVMRDCP 
Sbjct: 1010 WRRIWRLNVPERVRAFMWMMLHGRMLTNSLKSKMGLNHAMCTLCGDVEETIIHVMRDCPR 1069

Query: 104  AWAVWINSVPSDAICQFFEMDSVTWVDYNLSHNV 3
            A  +W   +P      F+  D   W+D NL++++
Sbjct: 1070 AMELWRCVIPMHDTVSFYRGDLQHWIDLNLNNSI 1103



 Score = 28.9 bits (63), Expect(2) = 1e-17
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 417  AVAPPDSLDVDDSVIWPGKSHGNFSVATTYNLLCGFEG 304
            AV PP     +D  +  G +   FSV+  Y  LCG+ G
Sbjct: 966  AVLPPMDDHGNDERVMTGDNSDTFSVSDMYKKLCGYYG 1003