BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00035276
         (529 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN36591.1| Retrovirus-related Pol polyprotein from transposo...   144   8e-38
gb|KHN39047.1| Retrovirus-related Pol polyprotein from transposo...   140   3e-37
gb|KHN02838.1| Retrovirus-related Pol polyprotein from transposo...   140   3e-37
gb|PNX90684.1| retrovirus-related Pol polyprotein from transposo...   135   5e-35
gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   138   1e-34
gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]   136   9e-34
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               134   3e-33
ref|XP_024200681.1| uncharacterized protein LOC112204028 [Rosa c...   128   6e-33
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   133   8e-33
gb|PNX95763.1| retrotransposon-related protein, partial [Trifoli...   130   7e-32
gb|PNX94522.1| copia-type polyprotein [Trifolium pratense]            129   2e-31
gb|PNX67946.1| copia-type polyprotein, partial [Trifolium pratense]   120   5e-31
dbj|GAU43011.1| hypothetical protein TSUD_28300 [Trifolium subte...   126   8e-31
dbj|GAU50131.1| hypothetical protein TSUD_192520 [Trifolium subt...   126   3e-30
dbj|GAU11414.1| hypothetical protein TSUD_344050 [Trifolium subt...   126   3e-30
dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subt...   126   3e-30
gb|PNX61211.1| copia-type polyprotein, partial [Trifolium pratense]   116   5e-30
dbj|GAU46070.1| hypothetical protein TSUD_180060 [Trifolium subt...   121   1e-29
gb|PNX72392.1| copia-type polyprotein, partial [Trifolium pratense]   124   1e-29
dbj|GAU39634.1| hypothetical protein TSUD_397220 [Trifolium subt...   121   2e-29

>gb|KHN36591.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 430

 Score =  144 bits (362), Expect = 8e-38
 Identities = 74/160 (46%), Positives = 93/160 (58%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           NK +IEC+ C KLGHYQYECP  E+ ANYVE                          +E 
Sbjct: 234 NKAVIECFKCHKLGHYQYECPDWEKNANYVE--------------------------LEK 267

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESF 406
            +D             E  LLM+  + +  K  +VW+LDSGCSNHM+GN+ WF +LDESF
Sbjct: 268 EKD-------------EELLLMSYVELEQDKMEEVWFLDSGCSNHMTGNKEWFSELDESF 314

Query: 407 SVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           S TVKLGNNTRM V GKG +++++N   Q IS VYY+PEL
Sbjct: 315 SQTVKLGNNTRMVVVGKGIIRMQVNGFTQAISGVYYVPEL 354


>gb|KHN39047.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 342

 Score =  140 bits (353), Expect = 3e-37
 Identities = 72/159 (45%), Positives = 92/159 (57%)
 Frame = +2

Query: 50  KELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIEST 229
           + +IEC+ C KLGHYQYECP  E+ ANYVE                          +E  
Sbjct: 206 RAVIECFKCHKLGHYQYECPDWEKNANYVE--------------------------LEKE 239

Query: 230 RDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESFS 409
           +D             E  LLM+  + +  K  +VW+LDSGCSNHM+GN+ WF +LDESFS
Sbjct: 240 KD-------------EELLLMSYVELEQDKMEEVWFLDSGCSNHMTGNKEWFSELDESFS 286

Query: 410 VTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            TVKLGNNTRM V GKG +++++N   Q IS VYY+PEL
Sbjct: 287 QTVKLGNNTRMVVVGKGIIRMQVNGFTQAISGVYYVPEL 325


>gb|KHN02838.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 342

 Score =  140 bits (353), Expect = 3e-37
 Identities = 72/159 (45%), Positives = 92/159 (57%)
 Frame = +2

Query: 50  KELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIEST 229
           + +IEC+ C KLGHYQYECP  E+ ANYVE                          +E  
Sbjct: 206 RAVIECFKCHKLGHYQYECPDWEKNANYVE--------------------------LEKE 239

Query: 230 RDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESFS 409
           +D             E  LLM+  + +  K  +VW+LDSGCSNHM+GN+ WF +LDESFS
Sbjct: 240 KD-------------EELLLMSYVELEQDKMEEVWFLDSGCSNHMTGNKEWFSELDESFS 286

Query: 410 VTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            TVKLGNNTRM V GKG +++++N   Q IS VYY+PEL
Sbjct: 287 QTVKLGNNTRMVVVGKGIIRMQVNGFTQAISGVYYVPEL 325


>gb|PNX90684.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 372

 Score =  135 bits (340), Expect = 5e-35
 Identities = 68/162 (41%), Positives = 95/162 (58%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           Q N+ELIECY C KLGH+QYECP                                     
Sbjct: 104 QFNRELIECYKCHKLGHFQYECP------------------------------------- 126

Query: 221 ESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDE 400
               D E +A +++ N +E  LLMA+ + +  K  ++W+LDSGCSNHM+GN+ WF D+DE
Sbjct: 127 ----DWERNAHYAELNESEEILLMAHAEHE-EKSVELWFLDSGCSNHMTGNKKWFTDIDE 181

Query: 401 SFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            +  +VKLGNN +M V G+G+VKL +N I+Q+I++VYY+PEL
Sbjct: 182 QYQQSVKLGNNFKMAVVGRGNVKLHVNGIMQVITNVYYVPEL 223


>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  138 bits (348), Expect = 1e-34
 Identities = 71/162 (43%), Positives = 91/162 (56%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           Q NK L+ECY C KLGH+QYECP  E+ ANY                             
Sbjct: 241 QFNKALVECYKCHKLGHFQYECPEWEKGANY----------------------------- 271

Query: 221 ESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDE 400
                       ++ +  E  LLMA  +   SK  +VW+LDSGCSNHMSGN+ WF DL+E
Sbjct: 272 ------------AELDEKEEMLLMAYVELNNSKMEEVWFLDSGCSNHMSGNKKWFIDLNE 319

Query: 401 SFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            F  +VKLGNN++M V GKG+V+L+ N + Q+ +DVYYIPEL
Sbjct: 320 QFRQSVKLGNNSKMAVMGKGNVRLQANGVTQVFTDVYYIPEL 361


>gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1062

 Score =  136 bits (342), Expect = 9e-34
 Identities = 73/160 (45%), Positives = 96/160 (60%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           NK+ IECY+C KLGH+Q +CP+ +E+ANY E           + EG              
Sbjct: 267 NKDNIECYHCHKLGHFQSDCPAWDEKANYAE-----------FDEG-------------- 301

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESF 406
                           E  LLMA++ EK S D KVW+LDSGC NHM G ++WF +LDE F
Sbjct: 302 ----------------EEMLLMAHS-EKGSYDKKVWFLDSGCRNHMCGTKDWFFNLDEQF 344

Query: 407 SVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            ++VKLG+N+RM V GKG+VKL+I  I Q+I++VYYIPEL
Sbjct: 345 RISVKLGDNSRMMVVGKGNVKLRIGGITQVITNVYYIPEL 384


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  134 bits (338), Expect = 3e-33
 Identities = 66/160 (41%), Positives = 92/160 (57%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           N+ ++ECY C  LGH+QYECP  E+ ANY                               
Sbjct: 246 NRAIVECYKCHNLGHFQYECPEWEKNANYA------------------------------ 275

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESF 406
             ++E +         E  LLMA  ++  +   +VW+LDSGCSNHM+G++ WF +L+E F
Sbjct: 276 --ELEEE---------EELLLMAYVEQNQANRDEVWFLDSGCSNHMTGSKEWFSELEEGF 324

Query: 407 SVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           + TVKLGN+TRM V GKGSVK+K+N + Q+I +VYY+PEL
Sbjct: 325 NRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVYYVPEL 364


>ref|XP_024200681.1| uncharacterized protein LOC112204028 [Rosa chinensis]
          Length = 297

 Score =  128 bits (321), Expect = 6e-33
 Identities = 68/160 (42%), Positives = 88/160 (55%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           NK  IECY C KLGH QYEC   E+ AN                                
Sbjct: 169 NKATIECYKCHKLGHLQYECLDWEKGAN-------------------------------- 196

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESF 406
                    +++ +  E  LLM+  +   SK  +VW+LDSGCSNHMSGN++WF DL+E F
Sbjct: 197 ---------YAEFDEEEEMLLMSYVELHNSKREEVWFLDSGCSNHMSGNKSWFLDLNEKF 247

Query: 407 SVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
             +VKLGNN+RM V GKG++KL++  I Q+ S+VYYIPEL
Sbjct: 248 RHSVKLGNNSRMAVMGKGNIKLQVGGITQVFSEVYYIPEL 287


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  133 bits (335), Expect = 8e-33
 Identities = 70/162 (43%), Positives = 92/162 (56%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           Q +K L+ECY C KLGH+Q+E P  E+ ANY                             
Sbjct: 243 QFDKALVECYKCHKLGHFQHEFPEWEKGANY----------------------------- 273

Query: 221 ESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDE 400
                    A+H ++   E  LLMA  +   SK  +VW+LDSGCSNHMSGN+ WF DL+E
Sbjct: 274 ---------AEHDEN---EEMLLMAYVELNNSKMEEVWFLDSGCSNHMSGNKQWFTDLNE 321

Query: 401 SFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            F  +VKLGNN++M V GKG+V+L+ N + Q+ +DVYYIPEL
Sbjct: 322 QFRQSVKLGNNSKMAVMGKGNVRLQANGVTQVFTDVYYIPEL 363


>gb|PNX95763.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1327

 Score =  130 bits (328), Expect = 7e-32
 Identities = 69/159 (43%), Positives = 87/159 (54%)
 Frame = +2

Query: 50  KELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIEST 229
           K  IEC+ C K GH+QYECP  E  AN+ E                              
Sbjct: 245 KAAIECFKCHKKGHFQYECPDWEREANFAE------------------------------ 274

Query: 230 RDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESFS 409
                  +H D       LLMA  +EK     ++W+LDSGCSNHMSGN+ WF DL+E F 
Sbjct: 275 ------LEHEDE-----LLLMAYVEEKKETREEIWFLDSGCSNHMSGNKEWFTDLNEDFK 323

Query: 410 VTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            TVKLGN++R+ V G GSV+L +N IVQ+I++VYYIPEL
Sbjct: 324 QTVKLGNDSRIAVTGIGSVRLWVNGIVQVITNVYYIPEL 362


>gb|PNX94522.1| copia-type polyprotein [Trifolium pratense]
          Length = 1172

 Score =  129 bits (324), Expect = 2e-31
 Identities = 67/163 (41%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           ++NKE IECY C KLGH+QYECP++ + ANY ++                          
Sbjct: 235 RINKETIECYKCHKLGHFQYECPNVGDYANYADN-------------------------- 268

Query: 221 ESTRDVETDADHSDSNVAEAYLLMA-NTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLD 397
                             E  LLMA +   + S   ++WYLDSGC NHM G + WFHDLD
Sbjct: 269 ------------------EEVLLMAFDKSHQESTKKQIWYLDSGCINHMCGVKEWFHDLD 310

Query: 398 ESFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
            +F  TV+L +N++M V GKG+VKL++N   Q+I+DVYYIPEL
Sbjct: 311 MNFKETVRLRDNSQMSVVGKGNVKLQLNGFTQIITDVYYIPEL 353


>gb|PNX67946.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 197

 Score =  120 bits (301), Expect = 5e-31
 Identities = 63/163 (38%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEE-RANYVEDGXXXXXXXMAYMEGNDTGGELNVPR 217
           ++NKE +ECY C KLGHYQ +CPS +E  ANY E                D G E+    
Sbjct: 46  KINKESVECYKCHKLGHYQSDCPSWDEDNANYAEF---------------DEGQEI---- 86

Query: 218 IESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLD 397
                            +  A   M N  + +S+  ++W+LDSGCSNHM GN+NW  D D
Sbjct: 87  -----------------LLMAQNTMVNESQNSSEKLELWFLDSGCSNHMVGNKNWLFDYD 129

Query: 398 ESFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           +SF  +VKLG++++M V+GKG++KL I    Q++++VY++P L
Sbjct: 130 DSFKDSVKLGDDSKMSVEGKGNLKLYIEGFTQILTNVYFLPGL 172


>dbj|GAU43011.1| hypothetical protein TSUD_28300 [Trifolium subterraneum]
          Length = 538

 Score =  126 bits (317), Expect = 8e-31
 Identities = 68/160 (42%), Positives = 90/160 (56%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           +KEL+ECY C KLGHYQ ECP+  E ANY E                             
Sbjct: 237 SKELVECYKCHKLGHYQNECPTWGENANYAE----------------------------- 267

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESF 406
                        N  E  LLMA T+ +  K+ ++W+LDSGCSNHM GN++W ++ DE++
Sbjct: 268 ------------FNDEEEMLLMAKTNCEEMKE-EIWFLDSGCSNHMIGNKDWMYEFDETY 314

Query: 407 SVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
             +VKLG++++MQV GKG+VKL IN  V +IS VYYIP L
Sbjct: 315 RDSVKLGDDSKMQVMGKGNVKLSINGRVHVISSVYYIPGL 354


>dbj|GAU50131.1| hypothetical protein TSUD_192520 [Trifolium subterraneum]
          Length = 1197

 Score =  126 bits (316), Expect = 3e-30
 Identities = 68/160 (42%), Positives = 90/160 (56%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           +KEL+ECY C KLGHYQ ECP+  E ANY E                             
Sbjct: 220 SKELVECYKCHKLGHYQNECPTRGENANYAE----------------------------- 250

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESF 406
                        N  E  LLMA T+ +  K+ ++W+LDSGCSNHM GN++W ++ DE++
Sbjct: 251 ------------FNDEEEMLLMAKTNCEEVKE-EIWFLDSGCSNHMIGNKDWMYEFDETY 297

Query: 407 SVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
             +VKLG++++MQV GKG+VKL IN  V +IS VYYIP L
Sbjct: 298 RDSVKLGDDSKMQVMGKGNVKLSINGRVHVISSVYYIPGL 337


>dbj|GAU11414.1| hypothetical protein TSUD_344050 [Trifolium subterraneum]
          Length = 1198

 Score =  126 bits (316), Expect = 3e-30
 Identities = 69/161 (42%), Positives = 88/161 (54%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           NKEL+ECY C KLGHYQ+ECP   + ANY E           ++   +T           
Sbjct: 244 NKELVECYKCHKLGHYQHECPDWND-ANYAE-----------FVNEEET----------- 280

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDESF 406
                              LLMA+TD   +   K WYLDSGCSNHM GN++W  D D SF
Sbjct: 281 -------------------LLMASTDHGNAIREKTWYLDSGCSNHMIGNKDWLFDFDPSF 321

Query: 407 SVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPELS 529
             +V+LGN+ RM V GKG+VKL IN  + +IS+VY+IP L+
Sbjct: 322 KDSVRLGNDARMSVMGKGNVKLFINGKIHVISNVYFIPGLN 362


>dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subterraneum]
          Length = 1322

 Score =  126 bits (316), Expect = 3e-30
 Identities = 68/162 (41%), Positives = 89/162 (54%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           +VNKE IECY C KLGHYQ+ECP+ EE+                                
Sbjct: 234 RVNKENIECYRCHKLGHYQHECPTWEEK-------------------------------- 261

Query: 221 ESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDE 400
                   DA+++  +  E  LLMA    +T    +VW+LDSGCSNHM G R W  D D+
Sbjct: 262 --------DANYAAYDSHEEILLMAKHGIETDARDEVWFLDSGCSNHMVGTREWLFDFDD 313

Query: 401 SFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           +   +VKLG+++RMQ+ GKG++KL I  I Q+ISDVYYIP L
Sbjct: 314 NIRESVKLGDDSRMQILGKGNLKLCIGGITQVISDVYYIPGL 355


>gb|PNX61211.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 154

 Score =  116 bits (291), Expect = 5e-30
 Identities = 59/162 (36%), Positives = 91/162 (56%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           +++KE +EC+ C +LGHY+ ECP+ EE                                 
Sbjct: 3   RISKETVECFKCHQLGHYKNECPTWEE--------------------------------- 29

Query: 221 ESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDE 400
                    A +++++  E +LLM   D +  +  + WYLDSGCSNHM GN+NW ++ DE
Sbjct: 30  ---------AKYAEADYEEEFLLMTGKDCEEFETER-WYLDSGCSNHMVGNKNWLYEFDE 79

Query: 401 SFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           ++  TVKLG++++M V GKG++KL+IN  V +I++VYYIP L
Sbjct: 80  NYRDTVKLGDDSKMNVVGKGNIKLRINGRVHVITEVYYIPGL 121


>dbj|GAU46070.1| hypothetical protein TSUD_180060 [Trifolium subterraneum]
          Length = 389

 Score =  121 bits (304), Expect = 1e-29
 Identities = 66/162 (40%), Positives = 87/162 (53%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           ++NKE ++CY C K GHYQ ECP  +  ANYVE                           
Sbjct: 238 RINKESVQCYKCHKFGHYQNECPEWDN-ANYVE--------------------------- 269

Query: 221 ESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDE 400
             T D             E  LLMA++    +   ++WYLDSGCSNHMSG + W HD D+
Sbjct: 270 --THD------------NEEMLLMADSTSINNPREEIWYLDSGCSNHMSGTKEWMHDFDD 315

Query: 401 SFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           SF+ +VKLGN+++M V GKG+VKL I   + +I+ VYYIP L
Sbjct: 316 SFTESVKLGNDSKMAVMGKGNVKLMIEGRIHVITVVYYIPGL 357


>gb|PNX72392.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 886

 Score =  124 bits (311), Expect = 1e-29
 Identities = 64/162 (39%), Positives = 91/162 (56%)
 Frame = +2

Query: 41  QVNKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRI 220
           Q++KE IEC+ C KLGHYQ ECP+ E+                                 
Sbjct: 238 QISKENIECFRCHKLGHYQSECPNWED--------------------------------- 264

Query: 221 ESTRDVETDADHSDSNVAEAYLLMANTDEKTSKDPKVWYLDSGCSNHMSGNRNWFHDLDE 400
                   +A+ ++ +  E  LLMA   ++++    VWYLDSGCSNHM GN+ W  D D+
Sbjct: 265 -------ANANFAEFDDKEEILLMAQGTDESNNKKVVWYLDSGCSNHMVGNKEWLFDFDD 317

Query: 401 SFSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           SF  +VKLG+++RM V GKG++KL IN +VQ+I+DVY++P L
Sbjct: 318 SFRESVKLGDDSRMAVMGKGNLKLNINGMVQVITDVYFLPGL 359


>dbj|GAU39634.1| hypothetical protein TSUD_397220 [Trifolium subterraneum]
          Length = 417

 Score =  121 bits (304), Expect = 2e-29
 Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
 Frame = +2

Query: 47  NKELIECYNCRKLGHYQYECPSLEERANYVEDGXXXXXXXMAYMEGNDTGGELNVPRIES 226
           NKE +EC+ C KLGHYQ ECP+                      EGND            
Sbjct: 146 NKENVECFKCHKLGHYQSECPN---------------------WEGND------------ 172

Query: 227 TRDVETDADHSDSNVAEAYLLMANTDEKTSK-DPKVWYLDSGCSNHMSGNRNWFHDLDES 403
                  A++++ N  E  LLM  TD    K + + W+LDSGCSNHM G+++W  + DE+
Sbjct: 173 -------ANYAEFNQYEEVLLMTKTDSNQHKYENETWFLDSGCSNHMVGHKDWMFEFDET 225

Query: 404 FSVTVKLGNNTRMQVKGKGSVKLKINEIVQMISDVYYIPEL 526
           +S  VKLG+++RM VKGKG++KL IN +V +IS+VY++P L
Sbjct: 226 YSDYVKLGDDSRMAVKGKGNIKLCINGVVHVISNVYFVPGL 266