BLASTX nr result
ID: Astragalus22_contig00034642
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00034642
(660 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 107 3e-50
gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 107 4e-50
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 102 3e-45
gb|OIT39959.1| histone deacetylase 14 [Nicotiana attenuata] 88 8e-42
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN... 124 9e-41
gb|PKA52309.1| integrator complex subunit 11 [Apostasia shenzhen... 92 2e-39
gb|PKA50244.1| hypothetical protein AXF42_Ash017838 [Apostasia s... 91 4e-39
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 99 9e-39
gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 88 2e-38
gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 91 3e-38
gb|AQK52011.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 88 4e-38
gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 90 6e-38
gb|ONL97201.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 87 6e-38
gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 89 8e-38
gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 87 1e-37
gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 90 1e-37
gb|AQK92248.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 90 1e-37
gb|AQK92237.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 90 1e-37
gb|AQK92238.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma... 90 1e-37
gb|AQK92235.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma... 90 1e-37
>gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 925
Score = 107 bits (268), Expect(3) = 3e-50
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
EVK+G++ I +V RFKYLGSIVQ D E+E DV+H+IQAGW+KWRRAS VL D KVPL LK
Sbjct: 809 EVKIGEQAITKVPRFKYLGSIVQQDAELEGDVHHRIQAGWMKWRRASGVLCDKKVPLKLK 868
Query: 562 GKFYRTAVR 588
GKFYRTAVR
Sbjct: 869 GKFYRTAVR 877
Score = 72.8 bits (177), Expect(3) = 3e-50
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +3
Query: 27 VAYIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
+AYIRAIK++YE TSVRTQ G ++DF IT+GLH G TLSPY+FTL++D
Sbjct: 690 IAYIRAIKDMYEGAKTSVRTQSGVSEDFPITIGLHQGSTLSPYLFTLVMD 739
Score = 67.8 bits (164), Expect(3) = 3e-50
Identities = 32/52 (61%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +2
Query: 185 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
HIQE RCMLFAD VL G+SR+E+NE++E WR+ALE++G +SRS T YM
Sbjct: 744 HIQEPVPRCMLFADDIVLTGDSREEINEKIERWRQALEEHGLRISRSKTEYM 795
>gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 819
Score = 107 bits (268), Expect(3) = 4e-50
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
EVK+G++ I +V RFKYLGSIVQ D E+E DV+H+IQAGW+KWRRAS VL D KVPL LK
Sbjct: 617 EVKIGEQAITKVPRFKYLGSIVQQDAELEGDVHHRIQAGWMKWRRASGVLCDKKVPLKLK 676
Query: 562 GKFYRTAVR 588
GKFYRTAVR
Sbjct: 677 GKFYRTAVR 685
Score = 72.8 bits (177), Expect(3) = 4e-50
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +3
Query: 27 VAYIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
+AYIRAIK++YE TSVRTQ G ++DF IT+GLH G TLSPY+FTL++D
Sbjct: 498 IAYIRAIKDMYEGAKTSVRTQSGVSEDFPITIGLHQGSTLSPYLFTLVMD 547
Score = 67.4 bits (163), Expect(3) = 4e-50
Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +2
Query: 185 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
H+QE RCMLFAD VL G+SR+E+NE++E WR+ALE++G +SRS T YM
Sbjct: 552 HVQEPVPRCMLFADDIVLTGDSREEINEKIERWRQALEEHGLRISRSKTEYM 603
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 102 bits (254), Expect(3) = 3e-45
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 9/97 (9%)
Frame = +1
Query: 379 LEVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNL 558
+EV++G+ I+ +V FKYLG I+Q++GEIE+DVNH+IQAGW KWR AS + D KVPL L
Sbjct: 340 IEVEIGENILRKVKSFKYLGCIIQDNGEIEQDVNHRIQAGWSKWRSASGFICDKKVPLKL 399
Query: 559 KGKFYRTAVR----QDCPCCMG-----HRVGLSETNM 642
KGKFYRTA+R CC H++ ++E M
Sbjct: 400 KGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAEVKM 436
Score = 68.9 bits (167), Expect(3) = 3e-45
Identities = 30/51 (58%), Positives = 44/51 (86%)
Frame = +3
Query: 27 VAYIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILDV 179
+AYIRAIK++Y+ +TSV+TQGG T++F I +GLH G +LSPY+FT++L+V
Sbjct: 222 IAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTIVLEV 272
Score = 60.1 bits (144), Expect(3) = 3e-45
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +2
Query: 185 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
HIQE C+LFAD VL+GE R++LN++LE W+ ALE YG +SRS T YM
Sbjct: 276 HIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEVYGLRISRSKTEYM 327
>gb|OIT39959.1| histone deacetylase 14 [Nicotiana attenuata]
Length = 763
Score = 87.8 bits (216), Expect(4) = 8e-42
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V++G ++IP+ FKYLGS++Q D EI DV H+I AGW+KWR AS VL D KVP LK
Sbjct: 232 DVRLGSQVIPKRDSFKYLGSMIQGDREINEDVTHRIGAGWMKWRLASGVLCDKKVPPILK 291
Query: 562 GKFYRTAVR 588
GKFYR VR
Sbjct: 292 GKFYRAVVR 300
Score = 64.7 bits (156), Expect(4) = 8e-42
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3
Query: 27 VAYIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
VAYIRAIK++Y+ T VRT GGD++ F + MGLH G LSP++F L++D
Sbjct: 113 VAYIRAIKDMYDGAKTKVRTVGGDSEHFPVVMGLHQGSALSPFLFALVMD 162
Score = 60.5 bits (145), Expect(4) = 8e-42
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 185 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YMNY 340
HI+ CMLFAD VLI E+RD +NERLE WR+ LE GF LSRS T Y+ Y
Sbjct: 167 HIRGDVPWCMLFADDIVLIDETRDGVNERLEVWRQTLESKGFKLSRSKTEYLEY 220
Score = 26.9 bits (58), Expect(4) = 8e-42
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 591 RLPMLYGT*GWAVRNQHENKLSV 659
RL MLYG W V+N H ++ V
Sbjct: 300 RLAMLYGAECWPVKNSHIQRMKV 322
>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
putative [Medicago truncatula]
Length = 195
Score = 124 bits (311), Expect(3) = 9e-41
Identities = 60/70 (85%), Positives = 63/70 (90%)
Frame = +1
Query: 379 LEVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNL 558
LEVKVGD IIPQVTRFKYLGS VQNDGEIE DV+H+IQAGWLKWRRAS VL D KVPL L
Sbjct: 66 LEVKVGDHIIPQVTRFKYLGSFVQNDGEIEADVSHRIQAGWLKWRRASGVLCDKKVPLKL 125
Query: 559 KGKFYRTAVR 588
KGKFYRTA+R
Sbjct: 126 KGKFYRTAIR 135
Score = 58.9 bits (141), Expect(3) = 9e-41
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 227 VLIGESRDELNERLETWRRALEDYGFHLSRSST*YMNY 340
VL+GESR+E+N RLETWR+ALE YGF LSRS T YM +
Sbjct: 18 VLVGESREEVNGRLETWRQALEAYGFRLSRSKTEYMEW 55
Score = 33.1 bits (74), Expect(3) = 9e-41
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 591 RLPMLYGT*GWAVRNQHENKLSV 659
R +LYGT WAV++QHEN++SV
Sbjct: 135 RPALLYGTECWAVKSQHENQVSV 157
>gb|PKA52309.1| integrator complex subunit 11 [Apostasia shenzhenica]
Length = 513
Score = 91.7 bits (226), Expect(3) = 2e-39
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V +GD+I+ + RF+YLGSI+QNDGEI+ DV +IQAGW+KWR AS VL D K+ +K
Sbjct: 311 DVTIGDQIVKKSERFRYLGSIIQNDGEIDNDVISRIQAGWVKWRNASGVLCDRKISSKIK 370
Query: 562 GKFYRTAVRQ 591
GKFY+ VRQ
Sbjct: 371 GKFYKNIVRQ 380
Score = 67.0 bits (162), Expect(3) = 2e-39
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +3
Query: 30 AYIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILDV 179
AYI+ IK++YE TSVRTQGG T DF IT+GLH G +LSPY+F LI++V
Sbjct: 193 AYIQVIKDMYEGAVTSVRTQGGLTKDFPITVGLHQGSSLSPYLFALIMEV 242
Score = 53.1 bits (126), Expect(3) = 2e-39
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 185 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
HIQ+ CMLFAD VLI ++++ +LE WR ALE G HLSRS T YM
Sbjct: 246 HIQDEVPWCMLFADDIVLIEKTKEGAKAKLELWRNALESKGLHLSRSKTEYM 297
>gb|PKA50244.1| hypothetical protein AXF42_Ash017838 [Apostasia shenzhenica]
Length = 609
Score = 91.3 bits (225), Expect(3) = 4e-39
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = +1
Query: 385 VKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLKG 564
+++GD+I+ + RF+YLGSI+QNDGEI +V +IQAGW+KWR AS VL D K+P +KG
Sbjct: 284 IEIGDQIVKKSERFRYLGSIIQNDGEIVNNVISRIQAGWVKWRNASGVLCDRKIPSKIKG 343
Query: 565 KFYRTAVR 588
KFY+T VR
Sbjct: 344 KFYKTVVR 351
Score = 65.1 bits (157), Expect(3) = 4e-39
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 30 AYIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
AYI+ IK++YE TSVRTQGG T DF IT+GLH G LSPY+F LI++
Sbjct: 168 AYIQVIKDMYEGAVTSVRTQGGLTKDFPITVGLHQGSALSPYLFALIME 216
Score = 54.3 bits (129), Expect(3) = 4e-39
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 152 LYFYINFGCL*HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST 325
L+ I G HIQ+ CMLFAD VLI ++++ +LE WR ALE G HLSRS T
Sbjct: 210 LFALIMEGMTGHIQDEVPWCMLFADDIVLIEKTKEGAKAKLELWRNALESKGLHLSRSKT 269
Query: 326 *YM 334
YM
Sbjct: 270 EYM 272
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 99.4 bits (246), Expect(3) = 9e-39
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +1
Query: 379 LEVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNL 558
L V++GD+ IP+ RF+YLGSI+Q +GE++ D+NH+IQAGW+KW+ AS VL D ++PL L
Sbjct: 450 LGVRIGDQEIPKSDRFRYLGSILQKNGELDEDLNHRIQAGWMKWKSASGVLCDRRMPLKL 509
Query: 559 KGKFYRTAVR 588
KGKFYRTA+R
Sbjct: 510 KGKFYRTAIR 519
Score = 64.3 bits (155), Expect(3) = 9e-39
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = +3
Query: 27 VAYIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
VAYI+AIK++YE T+VRT G T+ F IT+GLH G +LSPY+F L++D
Sbjct: 332 VAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYLFALVMD 381
Score = 45.8 bits (107), Expect(3) = 9e-39
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 185 HIQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
HIQ+ CMLFA VLI E+++ +N +L WR LE G LSRS T YM
Sbjct: 386 HIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLCLSRSKTEYM 437
>gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 88.2 bits (217), Expect(4) = 2e-38
Identities = 37/69 (53%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 815 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPHKLK 874
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 875 GKFYRTAIR 883
Score = 63.9 bits (154), Expect(4) = 2e-38
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 699 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 746
Score = 52.4 bits (124), Expect(4) = 2e-38
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 188 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 752 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 802
Score = 23.9 bits (50), Expect(4) = 2e-38
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 591 RLPMLYGT*GWAVRNQHENKLSV 659
R MLYG W+ + +H +LSV
Sbjct: 883 RPAMLYGAECWSTKRRHVQQLSV 905
>gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 91.3 bits (225), Expect(3) = 3e-38
Identities = 38/69 (55%), Positives = 57/69 (82%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKWR+A+ VL DT+VP LK
Sbjct: 815 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDTRVPRKLK 874
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 875 GKFYRTAIR 883
Score = 63.9 bits (154), Expect(3) = 3e-38
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 699 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 746
Score = 52.4 bits (124), Expect(3) = 3e-38
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 188 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 752 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 802
>gb|AQK52011.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 88.2 bits (217), Expect(4) = 4e-38
Identities = 37/69 (53%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 356 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPHKLK 415
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 416 GKFYRTAIR 424
Score = 63.9 bits (154), Expect(4) = 4e-38
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 240 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 287
Score = 52.4 bits (124), Expect(4) = 4e-38
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 188 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 293 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 343
Score = 23.1 bits (48), Expect(4) = 4e-38
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 591 RLPMLYGT*GWAVRNQHENKLSV 659
R MLYG W + +H +LSV
Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSV 446
>gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 90.1 bits (222), Expect(3) = 6e-38
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 815 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 874
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 875 GKFYRTAIR 883
Score = 63.9 bits (154), Expect(3) = 6e-38
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 699 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 746
Score = 52.8 bits (125), Expect(3) = 6e-38
Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR +++++LE WR+ LE GF LSRS T YM
Sbjct: 759 CMLFADDVVLIEESRSDVSQKLELWRQTLEAKGFRLSRSKTEYM 802
>gb|ONL97201.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 87.4 bits (215), Expect(4) = 6e-38
Identities = 36/69 (52%), Positives = 55/69 (79%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+ GWLKWR+A+ VL D +VP LK
Sbjct: 356 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKVGWLKWRQAAGVLCDPRVPRKLK 415
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 416 GKFYRTAIR 424
Score = 63.9 bits (154), Expect(4) = 6e-38
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 240 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 287
Score = 52.4 bits (124), Expect(4) = 6e-38
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 188 IQELASRCMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
IQ + CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 293 IQGVLPWCMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 343
Score = 23.1 bits (48), Expect(4) = 6e-38
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 591 RLPMLYGT*GWAVRNQHENKLSV 659
R MLYG W + +H +LSV
Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSV 446
>gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1038
Score = 89.0 bits (219), Expect(3) = 8e-38
Identities = 37/69 (53%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 837 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 896
Query: 562 GKFYRTAVR 588
GKFY+TA+R
Sbjct: 897 GKFYKTAIR 905
Score = 65.9 bits (159), Expect(3) = 8e-38
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+FTL++D
Sbjct: 721 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFTLVID 768
Score = 51.6 bits (122), Expect(3) = 8e-38
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 781 CMLFADDVVLIEESRSGVSQKLELWRKTLEAKGFRLSRSKTEYM 824
>gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 557
Score = 87.0 bits (214), Expect(4) = 1e-37
Identities = 36/69 (52%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q +G+I+ DV+H+I+AGWLKW++A+ VL D +VP LK
Sbjct: 356 DVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWQQAAGVLCDPRVPHKLK 415
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 416 GKFYRTAIR 424
Score = 63.9 bits (154), Expect(4) = 1e-37
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 240 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 287
Score = 51.2 bits (121), Expect(4) = 1e-37
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 300 CMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 343
Score = 23.9 bits (50), Expect(4) = 1e-37
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 591 RLPMLYGT*GWAVRNQHENKLSV 659
R MLYG W+ + +H +LSV
Sbjct: 424 RPAMLYGAECWSTKRRHVQQLSV 446
>gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 90.1 bits (222), Expect(3) = 1e-37
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 815 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 874
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 875 GKFYRTAIR 883
Score = 63.9 bits (154), Expect(3) = 1e-37
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 699 YINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 746
Score = 51.6 bits (122), Expect(3) = 1e-37
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 759 CMLFADDVVLIDESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 802
>gb|AQK92248.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 844
Score = 90.1 bits (222), Expect(3) = 1e-37
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 643 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 702
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 703 GKFYRTAIR 711
Score = 64.3 bits (155), Expect(3) = 1e-37
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 527 YINLIKDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 574
Score = 51.2 bits (121), Expect(3) = 1e-37
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 587 CMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 630
>gb|AQK92237.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 712
Score = 90.1 bits (222), Expect(3) = 1e-37
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 511 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 570
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 571 GKFYRTAIR 579
Score = 64.3 bits (155), Expect(3) = 1e-37
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 395 YINLIKDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 442
Score = 51.2 bits (121), Expect(3) = 1e-37
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 455 CMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 498
>gb|AQK92238.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92243.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92246.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92251.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92259.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92260.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92261.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 591
Score = 90.1 bits (222), Expect(3) = 1e-37
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 390 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 449
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 450 GKFYRTAIR 458
Score = 64.3 bits (155), Expect(3) = 1e-37
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 274 YINLIKDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 321
Score = 51.2 bits (121), Expect(3) = 1e-37
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 334 CMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 377
>gb|AQK92235.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92242.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92249.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92250.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
gb|AQK92262.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 576
Score = 90.1 bits (222), Expect(3) = 1e-37
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = +1
Query: 382 EVKVGDRIIPQVTRFKYLGSIVQNDGEIERDVNHQIQAGWLKWRRASCVLWDTKVPLNLK 561
+V + +++P+ F+YLGS++Q DG+I+ DV+H+I+AGWLKWR+A+ VL D +VP LK
Sbjct: 375 DVSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLK 434
Query: 562 GKFYRTAVR 588
GKFYRTA+R
Sbjct: 435 GKFYRTAIR 443
Score = 64.3 bits (155), Expect(3) = 1e-37
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 33 YIRAIKNIYERVSTSVRTQGGDTDDFLITMGLHPGLTLSPYIFTLILD 176
YI IK++Y V TSVRT GDTDDF I +GLH G LSPY+F L++D
Sbjct: 259 YINLIKDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVID 306
Score = 51.2 bits (121), Expect(3) = 1e-37
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 CMLFAD--VLIGESRDELNERLETWRRALEDYGFHLSRSST*YM 334
CMLFAD VLI ESR ++++LE WR+ LE GF LSRS T YM
Sbjct: 319 CMLFADDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYM 362