BLASTX nr result
ID: Astragalus22_contig00034251
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00034251
(605 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU50434.1| hypothetical protein TSUD_134890, partial [Trifo... 55 8e-23
dbj|GAU36102.1| hypothetical protein TSUD_277130 [Trifolium subt... 60 8e-22
gb|KYP66064.1| Putative ribonuclease H protein At1g65750 family ... 58 4e-19
gb|KYP65382.1| Putative ribonuclease H protein At1g65750 family,... 58 4e-19
dbj|GAU36827.1| hypothetical protein TSUD_320640 [Trifolium subt... 63 1e-18
dbj|GAU09987.1| hypothetical protein TSUD_393040 [Trifolium subt... 58 3e-18
gb|KHN30886.1| Putative ribonuclease H protein, partial [Glycine... 56 5e-18
dbj|GAU26446.1| hypothetical protein TSUD_294120 [Trifolium subt... 63 7e-18
gb|KHN28363.1| Putative ribonuclease H protein, partial [Glycine... 55 2e-17
gb|KHN41375.1| Putative ribonuclease H protein, partial [Glycine... 55 2e-17
gb|PNY15961.1| ribonuclease H [Trifolium pratense] 57 2e-17
gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta... 54 2e-17
gb|PNX85822.1| ribonuclease H, partial [Trifolium pratense] 61 3e-17
gb|KHN04350.1| hypothetical protein glysoja_030944 [Glycine soja] 78 3e-17
gb|KYP66783.1| Putative ribonuclease H protein At1g65750 family,... 55 4e-17
dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subt... 56 5e-17
gb|PNY01502.1| ribonuclease H [Trifolium pratense] 58 6e-17
gb|PNX83328.1| ribonuclease H, partial [Trifolium pratense] 66 7e-17
gb|KHN20323.1| Putative ribonuclease H protein, partial [Glycine... 52 9e-17
dbj|GAU46725.1| hypothetical protein TSUD_100170 [Trifolium subt... 56 1e-16
>dbj|GAU50434.1| hypothetical protein TSUD_134890, partial [Trifolium subterraneum]
Length = 712
Score = 55.5 bits (132), Expect(3) = 8e-23
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 22 LGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWN--WADA 195
LG G + FW + W G LKDLFP L+ + +A + ++GKW+ QW WN W+
Sbjct: 476 LGNGTCIRFWHETWHGPVCLKDLFPQLYCKSPQAEAIIYDVGKWVNQ--QWVWNLQWSTN 533
Query: 196 LRQSE 210
L +E
Sbjct: 534 LTSTE 538
Score = 55.1 bits (131), Expect(3) = 8e-23
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2
Query: 263 PSCDVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAK 442
PS + DR W L T FSVKS Y++L S +E+ ++A + LW ND+PSK
Sbjct: 554 PSLECADRRRWGLTQTGMFSVKSTYEFLQSREVVVA--IEDNVVKALQLLWLNDVPSKVS 611
Query: 443 IFVWRLILN 469
IF WRL+L+
Sbjct: 612 IFGWRLLLS 620
Score = 44.7 bits (104), Expect(3) = 8e-23
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 463 FKREEPESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
F EE E +SHL C SQ +W+R++ W+ +D + + +HF F
Sbjct: 644 FCGEEQEELSHLLFNCPFSQELWKRIFKWMNVDFISFDEGWKHFFAF 690
>dbj|GAU36102.1| hypothetical protein TSUD_277130 [Trifolium subterraneum]
Length = 241
Score = 60.5 bits (145), Expect(3) = 8e-22
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +2
Query: 263 PSCDVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAK 442
PS + DRW W L T FSVKS Y++L S +E+ ++A + LW ND+PSK
Sbjct: 89 PSLECADRWRWGLTQTGMFSVKSTYEFLQSREVVVA--IEDNVVKALQLLWLNDVPSKVS 146
Query: 443 IFVWRLILN 469
IF WRL+L+
Sbjct: 147 IFGWRLLLS 155
Score = 46.2 bits (108), Expect(3) = 8e-22
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 49 WTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADALRQSE 210
W + W G LKDLFP L+ + +A + ++GKW+ W W+ L +E
Sbjct: 20 WHETWHGPVCLKDLFPQLYCKSPQAEAIIYDVGKWVNQQSVWNLQWSTNLTSTE 73
Score = 45.1 bits (105), Expect(3) = 8e-22
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 463 FKREEPESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
F EE E +SHL C SQ +W+R++ W+ +D + + +HF F
Sbjct: 179 FCGEEQEELSHLLFNCPFSQELWKRIFKWMNVDFISSDEGSKHFFAF 225
>gb|KYP66064.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 335
Score = 57.8 bits (138), Expect(3) = 4e-19
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 16 RKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADA 195
R +G G +V FW D W G L + FP L+S K+Q+TV E G +++G QWE+ W
Sbjct: 38 RVVGDGGSVRFWHDRWVGGVILSETFPRLYSLAKKKQSTVGENGLFVEGGWQWEFQWRRR 97
Query: 196 L---RQSEVQN 219
L R+ E +N
Sbjct: 98 LILQREKEWEN 108
Score = 55.1 bits (131), Expect(3) = 4e-19
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 272 DVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKI-EACRKLWRNDIPSKAKIF 448
++ D W+W D ++ F+VKS Y WL H S GNV E + ++ R +W+ P K +F
Sbjct: 122 NIPDMWLWKCDPSKAFTVKSAYFWL--HSFFSAGNVLETILKQSFRCIWKVKAPKKTIVF 179
Query: 449 VWRLILN 469
W+L+LN
Sbjct: 180 AWQLLLN 186
Score = 29.6 bits (65), Expect(3) = 4e-19
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 475 EPESISHLCGGCEVSQRIWRRVYAWIGL 558
E E++ HL C +S +IW V W+G+
Sbjct: 212 EAENVCHLFLHCRISCKIWYLVLRWLGI 239
>gb|KYP65382.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 332
Score = 57.8 bits (138), Expect(3) = 4e-19
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 16 RKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADA 195
R +G G +V FW D W G L + FP L+S K+Q+TV E G +++G QWE+ W
Sbjct: 35 RVVGDGGSVRFWHDRWVGGVILSETFPRLYSLAKKKQSTVGENGLFVEGGWQWEFQWRRR 94
Query: 196 L---RQSEVQN 219
L R+ E +N
Sbjct: 95 LILQREKEWEN 105
Score = 55.1 bits (131), Expect(3) = 4e-19
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 272 DVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKI-EACRKLWRNDIPSKAKIF 448
++ D W+W D ++ F+VKS Y WL H S GNV E + ++ R +W+ P K +F
Sbjct: 119 NIPDMWLWKCDPSKAFTVKSAYFWL--HSFFSAGNVLETILKQSFRCIWKVKAPKKTIVF 176
Query: 449 VWRLILN 469
W+L+LN
Sbjct: 177 AWQLLLN 183
Score = 29.6 bits (65), Expect(3) = 4e-19
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 475 EPESISHLCGGCEVSQRIWRRVYAWIGL 558
E E++ HL C +S +IW V W+G+
Sbjct: 209 EAENVCHLFLHCRISCKIWYLVLRWLGI 236
>dbj|GAU36827.1| hypothetical protein TSUD_320640 [Trifolium subterraneum]
Length = 795
Score = 62.8 bits (151), Expect(3) = 1e-18
Identities = 21/61 (34%), Positives = 41/61 (67%)
Frame = +1
Query: 4 EVAKRKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWN 183
+V ++++G G+T+ FW D+W G ++L+ FP L+ +Q +V ++G W+ G+ +WE +
Sbjct: 525 QVVRKRMGDGNTINFWKDIWVGNQTLQQRFPRLYGISVQQDNSVRDVGNWVNGVWRWELS 584
Query: 184 W 186
W
Sbjct: 585 W 585
Score = 50.8 bits (120), Expect(3) = 1e-18
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +2
Query: 278 EDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWR 457
EDRWVW+ + GFSVKS Y +L + G N+ + + + +W++ +PSK W+
Sbjct: 613 EDRWVWVPNEADGFSVKSLYVFL-QGMFGPQNNLNDFECFVFKNIWKSPVPSKVCALAWQ 671
Query: 458 LILN 469
L L+
Sbjct: 672 LCLD 675
Score = 26.9 bits (58), Expect(3) = 1e-18
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E+ HL C + +W RV W+G +++ D+ + F
Sbjct: 704 ETARHLFMHCRFAAAVWYRVNRWLGKMVMIPPDIRMSYGLF 744
>dbj|GAU09987.1| hypothetical protein TSUD_393040 [Trifolium subterraneum]
Length = 1815
Score = 58.2 bits (139), Expect(3) = 3e-18
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +1
Query: 16 RKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNW 186
+K+G+GDT FW + W G + L+ FP LF +QQA + ++G+ + G QWE W
Sbjct: 1521 KKVGRGDTTNFWNEAWIGDQPLRLRFPRLFGISLQQQAVIQDVGRMIDGRWQWELLW 1577
Score = 53.9 bits (128), Expect(3) = 3e-18
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +2
Query: 272 DVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFV 451
DV DRW+WL D GF+VKS + L S +A S +E + ++LW+ +PSK + F
Sbjct: 1603 DVGDRWLWLGDGILGFTVKSAFLRLESMVANS-RILEPVEEFVFKRLWKCAVPSKVRAFG 1661
Query: 452 WRLILN 469
W+L+LN
Sbjct: 1662 WQLLLN 1667
Score = 27.3 bits (59), Expect(3) = 3e-18
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 463 FKREEPESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
F + E+ HL CE ++W + W+G L++ ++ F +
Sbjct: 1690 FCGRKTETAVHLFLHCEWVAKVWYSITGWLGFSLIIPPNLSTSFAMW 1736
>gb|KHN30886.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 373
Score = 56.2 bits (134), Expect(3) = 5e-18
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1
Query: 22 LGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADALR 201
+G G +++FW + W G+E LKD FP LF+ +Q +V G W + W+ W L
Sbjct: 87 VGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLVSVGNAGSWRRDQWTWDLTWKRQLN 146
Query: 202 QSEVQN 219
+E ++
Sbjct: 147 PNEEES 152
Score = 45.8 bits (107), Expect(3) = 5e-18
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 281 DRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWRL 460
DRW W L +++ F+V SCY + S + + N + I + +W+ +PSK +F WRL
Sbjct: 171 DRWKWSLHNSKLFTVSSCYSFAMSLVNQTQMNSDILDILSI--VWKVPVPSKVALFCWRL 228
Query: 461 ILN 469
+L+
Sbjct: 229 LLD 231
Score = 36.6 bits (83), Expect(3) = 5e-18
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E++ HL C+ S+ IW+ + +WIG+ V+ VQHF ++
Sbjct: 259 ENVVHLFFHCDFSKCIWKEILSWIGIVDVIAVGGVQHFWEY 299
>dbj|GAU26446.1| hypothetical protein TSUD_294120 [Trifolium subterraneum]
Length = 333
Score = 62.8 bits (151), Expect(3) = 7e-18
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +1
Query: 4 EVAKRKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWN 183
+V KR++G G T+ FW D+W G ++L+ FP L+ +Q +V E+G W++G +WE
Sbjct: 35 QVVKRRMGGGSTISFWKDIWVGDQTLQHRFPRLYGISMQQNNSVREVGNWVEGGWRWELL 94
Query: 184 W 186
W
Sbjct: 95 W 95
Score = 44.3 bits (103), Expect(3) = 7e-18
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 278 EDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWR 457
EDRWVW+ + GFSVKS Y +L + + + +K+W+ +PSK W+
Sbjct: 123 EDRWVWIPNEADGFSVKSLYVFLEGMFLPTNHLCDFERF-TFKKIWKTPVPSKVCALAWQ 181
Query: 458 LILN 469
+ L+
Sbjct: 182 VCLD 185
Score = 31.2 bits (69), Expect(3) = 7e-18
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 472 EEPESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVV 585
E E++ HL C + +W RV W+G +V+ D++
Sbjct: 211 ETIETVRHLFLHCRFASAVWYRVNRWLGTMVVIPHDII 248
>gb|KHN28363.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 417
Score = 54.7 bits (130), Expect(3) = 2e-17
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +1
Query: 22 LGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADALR 201
+G G +++FW + W G+E LKD FP LF+ +Q +V G W + W W L
Sbjct: 162 VGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLVSVGNAGSWRRDQWTWGLTWKRQLN 221
Query: 202 QSEVQN 219
+E ++
Sbjct: 222 PNEEES 227
Score = 45.8 bits (107), Expect(3) = 2e-17
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 281 DRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWRL 460
DRW W L +++ F+V SCY + S + + N + I + +W+ +PSK +F WRL
Sbjct: 246 DRWKWSLHNSKLFTVSSCYSFAMSLVNQTQMNSDILDILSI--VWKVPVPSKVALFCWRL 303
Query: 461 ILN 469
+L+
Sbjct: 304 LLD 306
Score = 36.6 bits (83), Expect(3) = 2e-17
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E++ HL C+ S IW+ V +WIG+ V+ VQHF ++
Sbjct: 334 ENVVHLFFHCDFSNCIWKEVLSWIGIVDVIAVGGVQHFWEY 374
>gb|KHN41375.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 363
Score = 54.7 bits (130), Expect(3) = 2e-17
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +1
Query: 22 LGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADALR 201
+G G +++FW + W G+E LKD FP LF+ +Q +V G W + W W L
Sbjct: 73 VGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLVSVGNAGSWRRDQWTWGLTWKRQLN 132
Query: 202 QSEVQN 219
+E ++
Sbjct: 133 PNEEES 138
Score = 45.8 bits (107), Expect(3) = 2e-17
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 281 DRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWRL 460
DRW W L +++ F+V SCY + S + + N + I + +W+ +PSK +F WRL
Sbjct: 157 DRWKWSLHNSKLFTVSSCYSFAMSLVNQTQMNSDILDILSI--VWKVPVPSKVALFCWRL 214
Query: 461 ILN 469
+L+
Sbjct: 215 LLD 217
Score = 36.6 bits (83), Expect(3) = 2e-17
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E++ HL C+ S+ IW+ + +WIG+ V+ VQHF ++
Sbjct: 245 ENVVHLFFHCDFSKCIWKEILSWIGIVDVIAVGGVQHFWEY 285
>gb|PNY15961.1| ribonuclease H [Trifolium pratense]
Length = 542
Score = 57.4 bits (137), Expect(3) = 2e-17
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 16 RKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNW 186
+K+G+GD FW +VW G +SL+ F L+ +Q + +MG+ L G WE+ W
Sbjct: 248 KKVGRGDATAFWNEVWVGNQSLRQRFRRLYGISSQQNDVIQQMGRMLDGRWHWEFTW 304
Score = 47.0 bits (110), Expect(3) = 2e-17
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 281 DRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWRL 460
DRW+WL D +GF+V S Y L + A +E + + LW++ PSK F W+L
Sbjct: 333 DRWLWLGDGIQGFTVNSAY-LLLENAAPIRRTLEPLESFVFKNLWKSAAPSKVCAFSWQL 391
Query: 461 ILN 469
LN
Sbjct: 392 FLN 394
Score = 32.3 bits (72), Expect(3) = 2e-17
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
ES HL C V+ ++W + W+GL L++ +++ F F
Sbjct: 423 ESAVHLFLHCGVAAKVWYEITRWLGLFLIIPHNLLTAFAMF 463
>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related,
partial [Medicago truncatula]
Length = 532
Score = 54.3 bits (129), Expect(3) = 2e-17
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +2
Query: 272 DVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFV 451
+V D+W WLLD G+SV+ Y+ H+ SG V+++ ++ +W IP K +FV
Sbjct: 323 NVPDKWSWLLDPINGYSVRESYR----HITTSGEYVDQSVVD---DVWHRYIPQKVSLFV 375
Query: 452 WRLILN 469
WRL+ N
Sbjct: 376 WRLLRN 381
Score = 41.6 bits (96), Expect(3) = 2e-17
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 EVAKRKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGK--WLQGM*QWE 177
E +R +G G+ FW D W G L FP LF ++ +V EM W +G W
Sbjct: 236 ENIRRVVGDGNNTFFWYDSWVGEMPLCTKFPRLFDLAVNKECSVGEMVTLGWAEGGRAWV 295
Query: 178 W 180
W
Sbjct: 296 W 296
Score = 40.8 bits (94), Expect(3) = 2e-17
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 451 VETYFKREEPESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
V+ ++ + ES +HL C + +W V WIG+ V S + +HFTQF
Sbjct: 400 VDCVYECGKLESATHLFLDCRIPTMVWLHVQNWIGISTVSPSQMREHFTQF 450
>gb|PNX85822.1| ribonuclease H, partial [Trifolium pratense]
Length = 348
Score = 60.8 bits (146), Expect(3) = 3e-17
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +2
Query: 281 DRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWRL 460
D+W WL D FSVKSCY L S N++ ++A ++LW DIPSK KIF WRL
Sbjct: 210 DKWRWLPDVNGLFSVKSCYSCLLS--LKQVVNLDAKVLDAIQRLWGTDIPSKIKIFGWRL 267
Query: 461 ILNE 472
+LN+
Sbjct: 268 LLNK 271
Score = 48.5 bits (114), Expect(3) = 3e-17
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 19 KLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADAL 198
++G G+ + FW W G +L+DL+P L++ +QA VSE +W W+W L
Sbjct: 125 RVGNGNDIEFWNFKWFGNHALRDLYPDLYAKETFKQAKVSERLGGALSRQRWRWSWLAPL 184
Query: 199 RQSEVQN 219
++ Q+
Sbjct: 185 DSTDDQS 191
Score = 26.9 bits (58), Expect(3) = 3e-17
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 472 EEPESISHLCGGCEVSQRIWRRVYAWI 552
++ E +HL C S+ +WR V W+
Sbjct: 297 QQIEDDTHLFFSCRFSKEVWRNVLLWL 323
>gb|KHN04350.1| hypothetical protein glysoja_030944 [Glycine soja]
Length = 229
Score = 77.8 bits (190), Expect(2) = 3e-17
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = +2
Query: 251 LAFGPSCDVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIP 430
L+ P+ V+D W W LD+ RGF+VK CY WLC AG V + + KLW+N+ P
Sbjct: 6 LSVTPNATVDDCWFWTLDAARGFTVKRCYAWLCDFFAGGRVVVADQQRAMWLKLWKNNAP 65
Query: 431 SKAKIFVWRLILNE 472
SK IF WR+++N+
Sbjct: 66 SKILIFAWRVLINK 79
Score = 38.5 bits (88), Expect(2) = 3e-17
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 475 EPESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E E++ H+ C V+++IW++V W+ + +V D+ HF F
Sbjct: 106 EDETVKHIFLDCRVAKKIWQQVCLWLDVPVVEGEDIQAHFMAF 148
>gb|KYP66783.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 288
Score = 55.1 bits (131), Expect(3) = 4e-17
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 272 DVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKI-EACRKLWRNDIPSKAKIF 448
++ D W+W D ++ F+VKS Y WL H S GNV E + ++ R +W+ P K +F
Sbjct: 75 NIPDMWLWKCDPSKAFTVKSAYFWL--HSFFSAGNVLETILKQSFRCIWKVKAPKKTIVF 132
Query: 449 VWRLILN 469
W+L+LN
Sbjct: 133 AWQLLLN 139
Score = 50.8 bits (120), Expect(3) = 4e-17
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 46 FWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADAL---RQSEVQ 216
FW D W G L + FP L+S K+Q+TV E G +++G QWE+ W L R+ E +
Sbjct: 1 FWHDRWVGGVILSETFPRLYSLAKKKQSTVGENGLFVEGGWQWEFQWRRRLILQREKEWE 60
Query: 217 N 219
N
Sbjct: 61 N 61
Score = 29.6 bits (65), Expect(3) = 4e-17
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 475 EPESISHLCGGCEVSQRIWRRVYAWIGL 558
E E++ HL C +S +IW V W+G+
Sbjct: 165 EAENVCHLFLHCRISCKIWYLVLRWLGI 192
>dbj|GAU24087.1| hypothetical protein TSUD_388800 [Trifolium subterraneum]
Length = 1985
Score = 55.8 bits (133), Expect(3) = 5e-17
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 10 AKRKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWA 189
A++ LG G+++ FW +VW G +SL+ FP LF +Q V E+G W+ G+ +W W
Sbjct: 1689 ARKYLGCGNSIKFWKEVWVGGQSLELQFPRLFGISVQQDDMVREVGSWVNGVWRWGLRWR 1748
Query: 190 DAL 198
L
Sbjct: 1749 RVL 1751
Score = 47.0 bits (110), Expect(3) = 5e-17
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 278 EDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWR 457
EDRWVW L+ GF+VKS Y+ L L V + A R +W++ +PSK W+
Sbjct: 1775 EDRWVWRLNVGDGFTVKSLYEAL-DPLLTPRCLVSSFESFAYRSIWKSAVPSKVSALAWQ 1833
Query: 458 LILN 469
L L+
Sbjct: 1834 LFLD 1837
Score = 32.3 bits (72), Expect(3) = 5e-17
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 472 EEPESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHF 594
EE E+ HL C+ + IW V W+G+ V+ +DV+ +
Sbjct: 1863 EEAETARHLFLHCDYAAGIWYAVCRWLGVFAVLPADVMMSY 1903
>gb|PNY01502.1| ribonuclease H [Trifolium pratense]
Length = 554
Score = 57.8 bits (138), Expect(3) = 6e-17
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +2
Query: 281 DRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWRL 460
DRW WL D FSVKS Y +L S + +E + EA +LW++D+PSK +F WRL
Sbjct: 343 DRWWWLPDVNGMFSVKSFYSFLLSSRQVT--ILETTEAEALSRLWKSDVPSKINVFGWRL 400
Query: 461 ILN 469
+LN
Sbjct: 401 LLN 403
Score = 41.2 bits (95), Expect(3) = 6e-17
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 22 LGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSE-MGK-WLQGM*QWEWNW-AD 192
+G G+ + FW W G++S LFP L++ + A VSE MG+ + +W WN D
Sbjct: 259 VGNGNNIEFWNFKWFGSQSFSSLFPDLYAKEVNKFAMVSERMGREGASSVCRWRWNGPLD 318
Query: 193 ALRQSEV 213
+ Q +V
Sbjct: 319 DIEQQQV 325
Score = 36.2 bits (82), Expect(3) = 6e-17
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E +HL C S+ +WR V W+GL + M + + HF F
Sbjct: 433 EDGAHLFFSCYFSKVVWRNVLKWLGLSIPMDVEGIDHFMLF 473
>gb|PNX83328.1| ribonuclease H, partial [Trifolium pratense]
Length = 573
Score = 66.2 bits (160), Expect(2) = 7e-17
Identities = 35/81 (43%), Positives = 46/81 (56%)
Frame = +2
Query: 272 DVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFV 451
D EDRW W+L+ + FSVKS Y +L S L N+E + A KLW+ND+PSK +F
Sbjct: 469 DREDRWRWMLNDSGLFSVKSVYTFLQSRLDSL--NLEPQLLHALHKLWKNDVPSKVGVFG 526
Query: 452 WRLILNEKNLNQFLTCVVAVK 514
WRL+L L V +K
Sbjct: 527 WRLLLERLPTRAALASKVVLK 547
Score = 48.9 bits (115), Expect(2) = 7e-17
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +1
Query: 22 LGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADALR 201
LG G ++ FW + W G L+DLFP LF + TVS++ + W +W D L
Sbjct: 388 LGNGASICFWKEKWFGAAPLRDLFPHLFDKEMFKDRTVSDLIHVGSSVVHWNSDWVDTLS 447
Query: 202 QSE 210
Q E
Sbjct: 448 QEE 450
>gb|KHN20323.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 417
Score = 52.0 bits (123), Expect(3) = 9e-17
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 22 LGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNWADALR 201
+G G +++FW + W G+E LKD FP LF+ +Q +V W + W W L
Sbjct: 162 VGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLESVGNASSWRRDQWTWGLTWKRQLN 221
Query: 202 QSEVQN 219
+E ++
Sbjct: 222 PNEEES 227
Score = 45.8 bits (107), Expect(3) = 9e-17
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 281 DRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFVWRL 460
DRW W L +++ F+V SCY + S + + N + I + +W+ +PSK +F WRL
Sbjct: 246 DRWKWSLHNSKLFTVSSCYSFAMSLVNQTQMNSDILDILSI--VWKVPVPSKVALFCWRL 303
Query: 461 ILN 469
+L+
Sbjct: 304 LLD 306
Score = 36.6 bits (83), Expect(3) = 9e-17
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E++ HL C+ S+ IW+ + +WIG+ V+ VQHF ++
Sbjct: 334 ENVVHLFFHCDFSKCIWKEILSWIGIVDVIAVGGVQHFWEY 374
>dbj|GAU46725.1| hypothetical protein TSUD_100170 [Trifolium subterraneum]
Length = 776
Score = 56.2 bits (134), Expect(3) = 1e-16
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 16 RKLGKGDTVMFWTDVWCGTESLKDLFPSLFSSCDKQQATVSEMGKWLQGM*QWEWNW 186
+K+G+GD+ FW ++W G +SL+ FP LF ++Q + +G +G QWE W
Sbjct: 482 KKVGRGDSTSFWNEIWIGDQSLRQRFPRLFGISLQKQEVIQNLGSLTEGRWQWELLW 538
Score = 52.4 bits (124), Expect(3) = 1e-16
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 272 DVEDRWVWLLDSTRGFSVKSCYQWLCSHLAGSGGNVEEAKIEACRKLWRNDIPSKAKIFV 451
D DRW+WL D +GF+VKS Y L +L + +E + ++LW+ PSK FV
Sbjct: 564 DNHDRWLWLGDGIQGFTVKSAYMRL-ENLVNNRRILEPVENFVFKRLWKCAAPSKVHAFV 622
Query: 452 WRLILN 469
W+L+L+
Sbjct: 623 WQLLLD 628
Score = 25.4 bits (54), Expect(3) = 1e-16
Identities = 9/41 (21%), Positives = 20/41 (48%)
Frame = +1
Query: 481 ESISHLCGGCEVSQRIWRRVYAWIGLDLVMHSDVVQHFTQF 603
E+ HL C+ ++W + W+G L++ ++ F +
Sbjct: 657 ETAVHLFLHCDWVAKVWYEITRWLGFTLIIPPNLAISFAMW 697