BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00033677
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013467752.1| endonuclease/exonuclease/phosphatase family ...    60   2e-09
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   5e-09
dbj|GAU39340.1| hypothetical protein TSUD_60910 [Trifolium subte...    56   6e-09
dbj|GAU27443.1| hypothetical protein TSUD_161290 [Trifolium subt...    57   6e-09
gb|PNY15479.1| ribonuclease H, partial [Trifolium pratense]            54   1e-08
dbj|GAU12942.1| hypothetical protein TSUD_97530 [Trifolium subte...    51   2e-08
dbj|GAU49093.1| hypothetical protein TSUD_137780 [Trifolium subt...    54   2e-08
dbj|GAU32195.1| hypothetical protein TSUD_277750 [Trifolium subt...    56   5e-08
dbj|GAU36844.1| hypothetical protein TSUD_213680 [Trifolium subt...    54   6e-08
gb|PNY12392.1| ribonuclease H, partial [Trifolium pratense]            53   8e-08
gb|ONK78423.1| uncharacterized protein A4U43_C02F18610 [Asparagu...    59   1e-07
gb|ONK61128.1| uncharacterized protein A4U43_C08F26530 [Asparagu...    59   2e-07
dbj|GAU46438.1| hypothetical protein TSUD_91560 [Trifolium subte...    51   2e-07
gb|PNX95269.1| ribonuclease H, partial [Trifolium pratense]            55   2e-07
dbj|GAU19044.1| hypothetical protein TSUD_193810 [Trifolium subt...    55   2e-07
gb|PNX73126.1| hypothetical protein L195_g029024 [Trifolium prat...    57   4e-07
gb|PNY16011.1| ribonuclease H, partial [Trifolium pratense]            52   8e-07
gb|PNX91173.1| ribonuclease H, partial [Trifolium pratense]            49   9e-07
gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]            45   2e-06
dbj|GAU36899.1| hypothetical protein TSUD_220680 [Trifolium subt...    47   2e-06

>ref|XP_013467752.1| endonuclease/exonuclease/phosphatase family protein [Medicago
            truncatula]
 gb|KEH41789.1| endonuclease/exonuclease/phosphatase family protein [Medicago
            truncatula]
          Length = 1456

 Score = 59.7 bits (143), Expect(2) = 2e-09
 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
 Frame = -1

Query: 313  LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
            LPK    +GF+    MNEAF+           + LW  +LR KY R  DL  +  A   D
Sbjct: 1135 LPKADGGLGFRQTHKMNEAFLMKILWNLIKNPEDLWCRVLRSKYGRNNDLIASINAHPYD 1194

Query: 145  SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN*VDTN 29
            S LWK++V++           + +G NT FWLD  V  N
Sbjct: 1195 SPLWKALVNIWNDFKGHVVWNIGDGRNTNFWLDKWVPNN 1233



 Score = 29.6 bits (65), Expect(2) = 2e-09
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 396  EHLQHGFIWGSTSKKRKQHLV 334
            + +Q GFIWG + + RK HL+
Sbjct: 1108 DKIQRGFIWGDSDQGRKAHLI 1128


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 57.0 bits (136), Expect(2) = 5e-09
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
 Frame = -1

Query: 313 LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
           LPK    +GFK    MNEAF+         +   LW  +L  KY R  DL     +   D
Sbjct: 276 LPKMNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYGRNNDLNNNISSQPYD 335

Query: 145 SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN*VDTN 29
           S LWK++V +          ++ +G +T FWLD  +  N
Sbjct: 336 SPLWKAIVGIWDDFKRHVIWQIGDGRSTNFWLDKWISNN 374



 Score = 31.2 bits (69), Expect(2) = 5e-09
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q GF+WG +++ RK HLV
Sbjct: 249 EKIQRGFVWGDSNQGRKAHLV 269


>dbj|GAU39340.1| hypothetical protein TSUD_60910 [Trifolium subterraneum]
          Length = 1084

 Score = 55.8 bits (133), Expect(2) = 6e-09
 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
 Frame = -1

Query: 313 LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
           LPK    +G K    MNEAF+        ++   LW+ +L  KY R  DLR +  +   D
Sbjct: 598 LPKVDGGIGIKRPHQMNEAFLMKILWNMINRPDVLWSKVLYNKYERNTDLRASIISQPYD 657

Query: 145 SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN*VDTNHIL 20
           S LWK++  +     +    +V NG    FWLD  +   H L
Sbjct: 658 SPLWKTLAGIGDHFRSHTVWQVGNGQQINFWLDKWMPDGHTL 699



 Score = 32.0 bits (71), Expect(2) = 6e-09
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q GF+WG T + RK HL+
Sbjct: 571 EKIQRGFLWGDTEQTRKPHLI 591


>dbj|GAU27443.1| hypothetical protein TSUD_161290 [Trifolium subterraneum]
          Length = 893

 Score = 57.0 bits (136), Expect(2) = 6e-09
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313 LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
           LPK+    G K+   MNEAF+        ++   LW  +L  KY R  DLR T  +   D
Sbjct: 611 LPKKDGGRGIKSPHQMNEAFLMKMLWNLINRPDDLWCKVLYSKYGRNNDLRTTITSLSYD 670

Query: 145 SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
           S LWK++  +  K   +    + NGN+  FWLD
Sbjct: 671 SPLWKALTGIWDKFQQNIVWNLGNGNHINFWLD 703



 Score = 30.8 bits (68), Expect(2) = 6e-09
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q GF WG T + RK HLV
Sbjct: 584 EKIQRGFFWGDTDQVRKLHLV 604


>gb|PNY15479.1| ribonuclease H, partial [Trifolium pratense]
          Length = 944

 Score = 53.9 bits (128), Expect(2) = 1e-08
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313  LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
            LPK+   +G K+   MN+AF+        +K   LW  +L  KY R +DLR    +   D
Sbjct: 820  LPKKAGGLGIKSPHQMNDAFLMKILWNMINKPDNLWCKVLYNKYGRKKDLRHAISSQPYD 879

Query: 145  SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
            S LWKS+  +  +       ++ +G N  FWLD
Sbjct: 880  SPLWKSLACIWDQFQNHTVWQLGDGENINFWLD 912



 Score = 33.1 bits (74), Expect(2) = 1e-08
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q GF+WG T +KR+ HL+
Sbjct: 793 EKIQRGFLWGDTEQKRRPHLI 813


>dbj|GAU12942.1| hypothetical protein TSUD_97530 [Trifolium subterraneum]
          Length = 1163

 Score = 51.2 bits (121), Expect(2) = 2e-08
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
 Frame = -1

Query: 325  ETVYLPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFA 158
            E   LPK+   +G +N   MN AF+        ++   LW  +L  KY R +DLR    +
Sbjct: 749  EVCCLPKKDGGLGIRNPHQMNIAFLMKMLWNMINRPDDLWCKVLYNKYGRNKDLRVDVSS 808

Query: 157  SQQDSMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
               DS LWK++  +  +       ++ +GN+  FW+D
Sbjct: 809  QPYDSPLWKALAGIWDQFQQYIVWQLGDGNHINFWMD 845



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLVR*E 325
           E +Q GF+WG T +KRK HL+  E
Sbjct: 726 EKIQRGFLWGDTEQKRKPHLINWE 749


>dbj|GAU49093.1| hypothetical protein TSUD_137780 [Trifolium subterraneum]
          Length = 477

 Score = 53.9 bits (128), Expect(2) = 2e-08
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313 LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
           LPK+   +  KN   MNEAF+        ++   LW  +L  KY R   LR T  +   D
Sbjct: 42  LPKKDGGLRIKNPHQMNEAFLMKMSWNLINRPDDLWCKVLYSKYGRNNYLRTTITSLSYD 101

Query: 145 SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
           S LWK++  +  K   +    + NGN+  FWLD
Sbjct: 102 SPLWKALTGIWDKFQQNIVWNLGNGNHINFWLD 134



 Score = 32.0 bits (71), Expect(2) = 2e-08
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q GF+WG T + RK HLV
Sbjct: 15  EKIQRGFLWGDTDQVRKPHLV 35


>dbj|GAU32195.1| hypothetical protein TSUD_277750 [Trifolium subterraneum]
          Length = 374

 Score = 55.8 bits (133), Expect(2) = 5e-08
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
 Frame = -1

Query: 325 ETVYLPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFA 158
           E   LPK+   +G +    MNEAF+           Q LW  +L  KY R +DLR +  +
Sbjct: 38  EVCCLPKKNGGLGIRRPHQMNEAFIMKMLWNLITNPQDLWCRVLYSKYCRNKDLRLSINS 97

Query: 157 SQQDSMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
              DS LWK++  +  K   +   ++ +GN   FWLD
Sbjct: 98  QPYDSPLWKALTDIWDKFQQNMVWQLGDGNTINFWLD 134



 Score = 28.9 bits (63), Expect(2) = 5e-08
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLVR*E 325
           E +Q  F+WG T + RK HL+  E
Sbjct: 15  EKIQRSFLWGYTDQGRKPHLINWE 38


>dbj|GAU36844.1| hypothetical protein TSUD_213680 [Trifolium subterraneum]
          Length = 1025

 Score = 53.5 bits (127), Expect(2) = 6e-08
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313 LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
           L K    +G K+  LMNEAF+        +K   LW  +L  KY R  DLR    +   D
Sbjct: 530 LSKNDGGLGIKSPHLMNEAFLMKILWNLINKPDDLWCQVLYSKYGRKIDLRFEIISQPYD 589

Query: 145 SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
           S LWK++  +  +       ++++GNN  FW+D
Sbjct: 590 SPLWKALTGIWEQFQNHIVWQLRDGNNINFWMD 622



 Score = 30.8 bits (68), Expect(2) = 6e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLVR*ERLSTSQSKG 298
           E +Q GF+WG   ++RK HL+  +    S++ G
Sbjct: 503 EKIQRGFLWGDKEEQRKPHLIGWDICCLSKNDG 535


>gb|PNY12392.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1594

 Score = 53.1 bits (126), Expect(2) = 8e-08
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313  LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
            L K    +G K    MN+AF+        +K   LW  +L GKY R  DL  T  +   D
Sbjct: 1201 LSKNEGGLGIKRPQHMNDAFLMKMLWNLINKPNDLWCKVLYGKYGRNDDLMVTIHSQSYD 1260

Query: 145  SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
            S LWK++  +  +   +   ++ NGN   FWLD
Sbjct: 1261 SPLWKALTGIWERFHQNIVWQLGNGNKINFWLD 1293



 Score = 30.8 bits (68), Expect(2) = 8e-08
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 396  EHLQHGFIWGSTSKKRKQHLVR*ERLSTSQSKG 298
            E +Q  F+WG T++ R+ HLV  +    S+++G
Sbjct: 1174 EKIQRSFLWGDTAQSRRPHLVGWDVCCLSKNEG 1206


>gb|ONK78423.1| uncharacterized protein A4U43_C02F18610 [Asparagus officinalis]
          Length = 410

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
 Frame = -1

Query: 310 PKQGEVVGFKNMCLMNEAFMTGY----YDKTQPLWTIILRGKYARGRDLRKTAFASQQDS 143
           PKQ   +G K + +MNEA +         +T+ LW  +L+ KY    D R+ A A Q DS
Sbjct: 284 PKQVGGLGIKKLSIMNEACLLKLSWRSLHETEGLWVKVLKAKYGHRADWRRLAVAKQGDS 343

Query: 142 MLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN*VD 35
             W+ +  +  K +      +K G + RFWLD   D
Sbjct: 344 DTWRQLAPIWNKGLHHMVWSIKGGRDVRFWLDRWTD 379


>gb|ONK61128.1| uncharacterized protein A4U43_C08F26530 [Asparagus officinalis]
          Length = 1228

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
 Frame = -1

Query: 310  PKQGEVVGFKNMCLMNEAFMTGY----YDKTQPLWTIILRGKYARGRDLRKTAFASQQDS 143
            PKQ   +G K + +MNEA +         +T+ LW  +L+ KY    D R+ A A Q DS
Sbjct: 747  PKQVGGLGIKKLSIMNEACLLKLSWRSLHETEGLWVKVLKAKYGHRADWRRLAVAKQGDS 806

Query: 142  MLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN*VD 35
              W+ +  +  K +      +K G + RFWLD   D
Sbjct: 807  DTWRQLAPIWNKGLHHMVWSIKGGRDVRFWLDRWTD 842


>dbj|GAU46438.1| hypothetical protein TSUD_91560 [Trifolium subterraneum]
          Length = 1179

 Score = 50.8 bits (120), Expect(2) = 2e-07
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
 Frame = -1

Query: 325  ETVYLPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFA 158
            E   LPK    +  K+   MNEAF+        ++   LW  +L  KY R  DLR +  A
Sbjct: 874  EVCCLPKVEGGLSIKSPHQMNEAFLMKILWNMINRPDDLWCKVLYKKYGRNTDLRVSINA 933

Query: 157  SQQDSMLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN 44
               DS LWK++  +  +       ++ NG    FWLDN
Sbjct: 934  KPYDSHLWKALSGIGDQFRRHTVWQMGNGQKVNFWLDN 971



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q GF+WG T + RK HL+
Sbjct: 851 EKIQRGFLWGDTDQTRKPHLI 871


>gb|PNX95269.1| ribonuclease H, partial [Trifolium pratense]
          Length = 943

 Score = 55.1 bits (131), Expect(2) = 2e-07
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313 LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
           LPK    +G K    MN+AF+        +    LW  +L  KY R +DLR T  +   D
Sbjct: 716 LPKNEGGLGIKRPQYMNDAFLMKMLWNLINNPNDLWCKVLYSKYERNKDLRITINSQTYD 775

Query: 145 SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
           S LWK++  V  +   +   ++ +GNN  FWLD
Sbjct: 776 SPLWKALTGVWEQFQQNIVWQLGDGNNINFWLD 808



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q  F+WG T + R+ HLV
Sbjct: 689 EKIQRIFLWGDTDQTRRPHLV 709


>dbj|GAU19044.1| hypothetical protein TSUD_193810 [Trifolium subterraneum]
          Length = 393

 Score = 55.1 bits (131), Expect(2) = 2e-07
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
 Frame = -1

Query: 322 TVYLPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFAS 155
           T+ +PKQ    G  N+ +MN+A +       +     LWT +L GKY +  D        
Sbjct: 43  TMTMPKQLGGHGTHNLRIMNDACLMKLGWNLHQGKDRLWTQVLWGKYGQNSDATAELVVK 102

Query: 154 QQDSMLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN*VD 35
             DS LWK +V V P  +      V NG + +FW D  +D
Sbjct: 103 HTDSDLWKGIVMVWPNLMEHEYWAVGNGTSIKFWTDKWID 142



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E LQ  FIWG T   R+ H++
Sbjct: 19  EILQRSFIWGDTKNVRRAHVI 39


>gb|PNX73126.1| hypothetical protein L195_g029024 [Trifolium pratense]
          Length = 240

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313 LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
           LPK    +G K    MN AF+        +    LW  +L GKY R  DLR T ++   D
Sbjct: 9   LPKNEGGLGIKRPHHMNNAFLVKMLWNLINNPDDLWCKVLYGKYGRNDDLRVTIYSQPYD 68

Query: 145 SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
           S LWK++  +  +   +   ++ +GNN  FWLD
Sbjct: 69  SPLWKALTGIWDQFQQNIVWQLGDGNNINFWLD 101


>gb|PNY16011.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1483

 Score = 51.6 bits (122), Expect(2) = 8e-07
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
 Frame = -1

Query: 313  LPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFASQQD 146
            LPK    +G +    MNEAF+             LW  +L  KY R +DL  +  A   D
Sbjct: 1229 LPKIDGGLGLRQTHNMNEAFLMKILWNLIKNPNNLWCRVLHSKYGRNKDLIASIIAQPYD 1288

Query: 145  SMLWKSVVHVLPKAIASARIEVKNGNNTRFWLD 47
            S LWK++  +          ++ +G NT FWLD
Sbjct: 1289 SPLWKALAGIWDDFHRHVVWQIGDGRNTNFWLD 1321



 Score = 28.9 bits (63), Expect(2) = 8e-07
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 396  EHLQHGFIWGSTSKKRKQHLV 334
            + +Q GF+WG + + RK HL+
Sbjct: 1202 DKIQRGFLWGDSEQGRKAHLI 1222


>gb|PNX91173.1| ribonuclease H, partial [Trifolium pratense]
          Length = 390

 Score = 48.9 bits (115), Expect(2) = 9e-07
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
 Frame = -1

Query: 322 TVYLPKQGEVVGFKNMCLMNEAFMT--GYYDKTQP--LWTIILRGKYARGRDLRKTAFAS 155
           T+ +PK+   +  ++M  MN A +   G+  K Q   LW  +LRGKYARG  + ++    
Sbjct: 226 TLTIPKELGGLAVRDMSKMNLACIMKLGWSIKMQENNLWCQVLRGKYARGNSIFESPIVK 285

Query: 154 QQDSMLWKSVVHVLPKAIASARIEVKNGNNTRFWLDN*VDTN 29
           + DS LWKS+  V           + +G     W D  +DT+
Sbjct: 286 KSDSSLWKSIGKVWSDISKFEAWSIGDGLKVNCWKDIWIDTS 327



 Score = 31.6 bits (70), Expect(2) = 9e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLVR*ERLSTSQSKG 298
           + LQ GF+WG    KR+ H VR   L+  +  G
Sbjct: 202 QKLQRGFVWGDDENKRRLHTVRWSTLTIPKELG 234


>gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1770

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
 Frame = -1

Query: 310  PKQGEVVGFKNMCLMNEA-FMTGYYDKTQP---LWTIILRGKYARG-RDLRKTAFASQQD 146
            PK    +G + + +MN A  M   +D ++    +W  +LRGKY RG  D+ K + A   D
Sbjct: 1362 PKSLGGLGLRRLDVMNRACLMKLGWDLSRGSNGMWCAVLRGKYGRGVTDMMKVS-AKTAD 1420

Query: 145  SMLWKSVVHVLPKAIASARIEVKNGNNTRFW 53
            S LWK++V ++P   A     + NG  T  W
Sbjct: 1421 SSLWKNLVQLMPWIEAHYCRSIGNGRTTHAW 1451



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -2

Query: 396  EHLQHGFIWGSTSKKRKQHLVR*ERLSTSQSKG 298
            + LQ GFIWG TS+ RK H V  E  +  +S G
Sbjct: 1334 QRLQRGFIWGETSEGRKYHAVSWEIATKPKSLG 1366


>dbj|GAU36899.1| hypothetical protein TSUD_220680 [Trifolium subterraneum]
          Length = 385

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = -1

Query: 325 ETVYLPKQGEVVGFKNMCLMNEAFMT----GYYDKTQPLWTIILRGKYARGRDLRKTAFA 158
           E   LPK+ E +G ++   MNEAF+        +    LW  +L  KY R +DLR    A
Sbjct: 195 EVCCLPKEDEGLGMRSPHQMNEAFLMKMLWNMINNPNDLWWKVLYSKYGRDKDLRVAISA 254

Query: 157 SQQDSMLWKSVV 122
              DS+LW++ V
Sbjct: 255 QPYDSLLWRAFV 266



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 396 EHLQHGFIWGSTSKKRKQHLV 334
           E +Q GF+WG T + RK HL+
Sbjct: 172 EKIQRGFLWGDTDQARKPHLI 192