BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00033251
         (572 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY17625.1| ribonuclease H [Trifolium pratense]                     86   2e-17
gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]            89   6e-17
dbj|GAU14768.1| hypothetical protein TSUD_204170 [Trifolium subt...    65   9e-17
dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subt...    87   1e-16
gb|KYP74203.1| Putative ribonuclease H protein At1g65750 family ...    87   2e-16
gb|KYP35629.1| Putative ribonuclease H protein At1g65750 family ...    87   2e-16
dbj|GAU11845.1| hypothetical protein TSUD_75960 [Trifolium subte...    85   7e-16
dbj|GAU35137.1| hypothetical protein TSUD_394630 [Trifolium subt...    85   1e-15
gb|PNX92660.1| ribonuclease H [Trifolium pratense]                     83   1e-15
gb|PNX74568.1| replication A1-like protein [Trifolium pratense]        79   2e-15
dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subt...    84   2e-15
dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subt...    84   2e-15
dbj|GAU22731.1| hypothetical protein TSUD_138560 [Trifolium subt...    82   5e-15
dbj|GAU33259.1| hypothetical protein TSUD_333820 [Trifolium subt...    81   5e-15
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                     83   6e-15
dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subt...    82   7e-15
dbj|GAU10400.1| hypothetical protein TSUD_423410, partial [Trifo...    80   2e-14
gb|ABN08572.1| RNA-directed DNA polymerase; Ribonuclease H, rela...    75   5e-14
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    80   5e-14
gb|PNX60645.1| replication A1-like protein, partial [Trifolium p...    74   1e-13

>gb|PNY17625.1| ribonuclease H [Trifolium pratense]
          Length = 188

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGF-DNINFLEQDIPTWFRRGTDITNHHMFVAA 394
           CPR  + +E+ILHCLRDC F R  W S+G  D+  F E D+  W + G D      F+AA
Sbjct: 13  CPRCTTEEETILHCLRDCEFVRSFWKSIGITDHTFFQEGDLYVWMKHGIDGPFTFSFLAA 72

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAFV 280
            WW+WR RN +CM NE +S   ++    NL  L    F+
Sbjct: 73  IWWIWRARNHLCMENELISYFSLRMCTENLVHLLKKCFL 111


>gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1142

 Score = 88.6 bits (218), Expect = 6e-17
 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
 Frame = -3

Query: 570  CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFL-EQDIPTWFRRGTDITNHHMFVAA 394
            CPR     E+ LHCLRDC F  ++W S+GF + +F  E D+  W R G    +  MF+AA
Sbjct: 1025 CPRCNQEIETTLHCLRDCDFAIRLWHSIGFTDQSFYRENDLYNWLRIGIQGKSVFMFLAA 1084

Query: 393  CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAFVVQEVV 265
             WWLWR RN +C+ANE VSL+ ++    N A L    F  Q  V
Sbjct: 1085 VWWLWRARNLLCLANELVSLITLRMWTENYAHLLFRCFFKQATV 1128


>dbj|GAU14768.1| hypothetical protein TSUD_204170 [Trifolium subterraneum]
          Length = 503

 Score = 64.7 bits (156), Expect(2) = 9e-17
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQ-DIPTWFRRGTDITNHHMFVAA 394
           C R  +N E+ LHCLRDC    ++W ++GF N +F  Q ++  W       +  H+FVA 
Sbjct: 318 CSRCLANVETTLHCLRDCPDAARIWDAIGFRNGDFYSQMNLDLWLNSNVKGSGAHLFVAG 377

Query: 393 CWWLWRERNMCMANESVSLLQVKH 322
            WW WR RN+      V L+ + H
Sbjct: 378 LWWNWRARNIV----CVELMAIYH 397



 Score = 49.7 bits (117), Expect(2) = 9e-17
 Identities = 18/40 (45%), Positives = 31/40 (77%)
 Frame = -1

Query: 263 HRYAPIISNIKELVERNWRIRFYHTMREANYAADFMAKYG 144
           H YA +I+NI+++++ NW +   H++RE N++ADF+AK G
Sbjct: 431 HCYAAVITNIQDMLKFNWNVTLSHSLREGNFSADFLAKLG 470


>dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subterraneum]
          Length = 440

 Score = 87.0 bits (214), Expect = 1e-16
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQD-IPTWFRRGTDITNHHMFVAA 394
           CPR    +E+I+HCLRDC F + +W ++GF +  F   D +  W R+G D  +  MF+AA
Sbjct: 165 CPRSDIAEETIMHCLRDCEFVKHLWKTIGFTDQTFFHGDNLYAWLRKGCDSPSMFMFLAA 224

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATL 298
            WW+WR RN +C+ANE VS   +   I + A L
Sbjct: 225 LWWIWRARNKLCLANELVSPFTISRCIEDYALL 257


>gb|KYP74203.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 611

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQDIPTWFRRGTDITNHHMFVAAC 391
           C R   + ES+LHC+RDC + + +WL  GF NINF   ++ TW +RG +      F+A  
Sbjct: 334 CVRCGEDTESVLHCMRDCKYSKALWLQFGFSNINFFNHEVRTWIQRGVNSAQCSKFLAVM 393

Query: 390 WWLWRERNM-CMANESVSLLQVKHHIYNLATLNLNAFVVQEV 268
           WW WR RNM  +  E  ++ QV++ I +      NAF  ++V
Sbjct: 394 WWTWRWRNMDVLGGEEWNMEQVRYKINSTLCDWNNAFAGEQV 435


>gb|KYP35629.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1411

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
 Frame = -3

Query: 570  CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQDIPTWFRRGTDITNHHMFVAAC 391
            C R   + ES+LHC+RDC + + +WL  GF NINF   ++ TW +RG +      F+A  
Sbjct: 1134 CVRCGEDTESVLHCMRDCKYSKALWLQFGFSNINFFNHEVRTWIQRGVNSAQCSKFLAVM 1193

Query: 390  WWLWRERNM-CMANESVSLLQVKHHIYNLATLNLNAFVVQEV 268
            WW WR RNM  +  E  ++ QV++ I +      NAF  ++V
Sbjct: 1194 WWTWRWRNMDVLGGEEWNMEQVRYKINSTLCDWNNAFAGEQV 1235


>dbj|GAU11845.1| hypothetical protein TSUD_75960 [Trifolium subterraneum]
          Length = 386

 Score = 84.7 bits (208), Expect = 7e-16
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQ-DIPTWFRRGTDITNHHMFVAA 394
           CPR   + E+ LHCLRDC F   +W SLGF + NF ++ D  +W R G   ++  +F+AA
Sbjct: 165 CPRCNIHVETDLHCLRDCDFVYTIWKSLGFTDHNFFQEVDSSSWLRNGLSCSSMFLFMAA 224

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLN 289
            WW+WR RN +C+ NE V    +K  I + A L  N
Sbjct: 225 IWWIWRTRNALCLDNELVPQFSLKMRIVDYALLLKN 260


>dbj|GAU35137.1| hypothetical protein TSUD_394630 [Trifolium subterraneum]
          Length = 547

 Score = 84.7 bits (208), Expect = 1e-15
 Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFL-EQDIPTWFRRGTDITNHHMFVAA 394
           CPR  +  E+ LHCLRDC F + +W S+GF ++NF  E D   W R G    +  +F+AA
Sbjct: 328 CPRCNTLAETTLHCLRDCDFVQIIWKSIGFSDLNFFQEDDSYDWLRNGLSFPSMFIFLAA 387

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLN 289
            WW+WR RN +C+ +E + L  +K  I + A L  N
Sbjct: 388 VWWIWRARNALCLNSELIPLFALKLRIMDYALLLRN 423


>gb|PNX92660.1| ribonuclease H [Trifolium pratense]
          Length = 308

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQ-DIPTWFRRGTDITNHHMFVAA 394
           C R    DES LHC+RD  F R +W  +GF+N++F    D+  W + G   +N  +F A 
Sbjct: 31  CTRCGLQDESFLHCIRDYEFSRSLWNHIGFNNLDFFSNLDVYDWLKLGATCSNDLLFSAG 90

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAF 283
            WW WR RN MC+ NE+ SL ++  HI  +     N F
Sbjct: 91  LWWSWRHRNLMCLNNETWSLSRISFHIRAMVETFSNCF 128


>gb|PNX74568.1| replication A1-like protein [Trifolium pratense]
          Length = 109

 Score = 78.6 bits (192), Expect = 2e-15
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQ-DIPTWFRRGTDITNHHMFVAA 394
           C R    DES LHC+RDC F R +W   GF+N++F    D+  W + GT  +   +F A 
Sbjct: 7   CTRCGLQDESFLHCIRDCEFSRSIWNHTGFNNLDFFSNLDVYDWLKLGTTGSKDLIFRAG 66

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNL 292
            WW  R RN MC+ NE+ SL ++  HI  +   NL
Sbjct: 67  VWWSSRHRNLMCLNNETWSLSRISFHIRVIYGRNL 101


>dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = -3

Query: 570  CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLE-QDIPTWFRRGTDITNHHMFVAA 394
            CPR  ++ E+ +HCLRDC F  ++W S+GF + NF +  D+  W   G +     +F+A 
Sbjct: 980  CPRCSNHAETTIHCLRDCDFVNRIWKSIGFLDQNFFQGVDVYAWLHNGLNSPTMMLFIAG 1039

Query: 393  CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAFVVQEVVAPLCTNHIQHQGIGGE 217
             WW+WR RN MC+ +E VS    K  I + A L  N +     ++   T  ++   +GG 
Sbjct: 1040 IWWIWRARNAMCLDSEMVSFWSQKLRIMDYALLLKNCYFSTHEIS--TTKFVKWNALGGT 1097

Query: 216  KL 211
             L
Sbjct: 1098 GL 1099


>dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subterraneum]
          Length = 1049

 Score = 84.0 bits (206), Expect = 2e-15
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -3

Query: 546  ESILHCLRDCSFPRQVWLSLGFDNINFLEQDIP-TWFRRGTDITNHHMFVAACWWLWRER 370
            E+ LHCLRDC F + +W S+GF N+NF + D P  W R G   ++  +F+A  WW+WR R
Sbjct: 782  ETTLHCLRDCDFAQSIWKSIGFSNLNFFQGDDPYVWIRNGLHCSSMFLFMATIWWIWRAR 841

Query: 369  N-MCMANESVSLLQVKHHIYNLATL 298
            N +C+ +ES+    +K  I + A L
Sbjct: 842  NALCLNSESILFYSLKLRIMDYALL 866


>dbj|GAU22731.1| hypothetical protein TSUD_138560 [Trifolium subterraneum]
          Length = 385

 Score = 82.4 bits (202), Expect = 5e-15
 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQD-IPTWFRRGTDITNHHMFVAA 394
           CP   + +E+ +HCLRDC F + +W ++G+ +  F + D +  W R+G D  +  MF+AA
Sbjct: 254 CPMCNAAEETTMHCLRDCEFIKHLWKTIGYTDQTFFQGDNLYAWLRKGCDSPSMFMFLAA 313

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAFVVQE 271
            WW+WR RN +C+ANE VS   ++  I +   L    +  Q+
Sbjct: 314 VWWIWRARNKLCLANELVSQFTIRRCIGDYTLLLQKCYFKQK 355


>dbj|GAU33259.1| hypothetical protein TSUD_333820 [Trifolium subterraneum]
          Length = 284

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLE-QDIPTWFRRGTDITNHHMFVAA 394
           C R  S +E+ILHCLRDC   R++W SLGF N +F    D+  W R  +   N   F+A 
Sbjct: 13  CTRCSSGEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAG 72

Query: 393 CWWLWRERNM-CMANESVSLLQVKHHIYNLATLNLNAF 283
            WW WR RN+ C+ N S+   +V   +  L  L ++ F
Sbjct: 73  LWWNWRARNICCVGNASIHSFKVVAEVSKLVALIVSCF 110


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score = 82.8 bits (203), Expect = 6e-15
 Identities = 35/100 (35%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
 Frame = -3

Query: 570  CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFL-EQDIPTWFRRGTDITNHHMFVAA 394
            C R  +N+E+++HCLRDC+  +++W +LG+ NI+F    ++ +W +  +     ++F+A 
Sbjct: 1033 CTRCSNNEETVIHCLRDCTTAKRIWEALGYSNISFFSSNNLESWLKIHSYGPAANLFLAG 1092

Query: 393  CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAFVV 277
             WW WR RN +C+ NES+ + Q+   +  LA+L L+ F +
Sbjct: 1093 LWWNWRARNIVCVGNESIHMYQILIEVRKLASLILSCFSI 1132


>dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score = 82.4 bits (202), Expect = 7e-15
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLEQD-IPTWFRRGTDITNHHMFVAA 394
           CPR    +ES LHCLR+C F ++ W ++GF    F + D +  W R   D  +  +F+AA
Sbjct: 270 CPRCNIEEESTLHCLRNCEFIKRFWKAIGFLGQTFFQGDNLNDWLRNSIDGPSSFLFMAA 329

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAFVVQEV 268
            WW+W  RN +CM NE++S   ++ +  NLA L    F+ Q +
Sbjct: 330 VWWIWCARNQLCMDNEAISYFTLRTNTENLAQLLRMCFIKQNI 372


>dbj|GAU10400.1| hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
          Length = 284

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFLE-QDIPTWFRRGTDITNHHMFVAA 394
           C R  S +E+ILHCLRDC   R++W SLGF N +F    D+  W R  +   N   F+A 
Sbjct: 7   CTRCSSGEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAG 66

Query: 393 CWWLWRERNM-CMANESVSLLQVKHHIYNLATLNLNAF 283
            WW WR RN+ C+ N S+   +V   +  L  L +  F
Sbjct: 67  LWWNWRARNIFCVGNASIHSFKVVAEVSKLVALIVFCF 104


>gb|ABN08572.1| RNA-directed DNA polymerase; Ribonuclease H, related [Medicago
           truncatula]
          Length = 121

 Score = 75.1 bits (183), Expect = 5e-14
 Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNINFL-EQDIPTWFRRGTDITNHHMFVAA 394
           C R  +++E ILHC+RDC F   +W +LGF N+NF    ++  W +  ++ +  ++F+A 
Sbjct: 7   CSRCQTSEEFILHCIRDCPFAMNLWKTLGFINVNFFSNMNLLDWIKSHSNGSAANIFLAG 66

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATL 298
            WW W+ RN +C+ N+S+ L  V      L++L
Sbjct: 67  FWWNWKARNIVCVGNDSIELFSVVSEARRLSSL 99


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 79.7 bits (195), Expect = 5e-14
 Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGF-DNINFLEQDIPTWFRRGTDITNHHMFVAA 394
           C R    DE+ LHC+RDC F R +W  +GF  N  F       WF+ G   +   +F   
Sbjct: 161 CARCGEEDETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHDWFKIGMSSSLPDIFFGG 220

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYNLATLNLNAFVVQEVV 265
            WW WR RN MC+ NE++SL ++ ++I + AT   +AF  +E V
Sbjct: 221 LWWAWRHRNLMCLNNETMSLFRLCNNIVSAATYIKSAFDSEENV 264


>gb|PNX60645.1| replication A1-like protein, partial [Trifolium pratense]
          Length = 140

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -3

Query: 570 CPRFPSNDESILHCLRDCSFPRQVWLSLGFDNIN-FLEQDIPTWFRRGTDITNHHMFVAA 394
           CPR  +++E+ LHC+RDC F R +W  LGF   + F+  D   W + G+  +    F   
Sbjct: 7   CPRCGTHEETFLHCVRDCDFSRPIWHHLGFITPDFFIPMDAHEWLKFGSTGSQVFAFSXX 66

Query: 393 CWWLWRERN-MCMANESVSLLQVKHHIYN-LATL 298
            WW WR RN MC+ NE+ S+ ++  +I++ +ATL
Sbjct: 67  VWWAWRHRNLMCLQNETWSISRLSFNIHSMIATL 100