BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00033155
         (474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subt...    68   4e-21
dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subt...    70   6e-19
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                     62   3e-18
dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subt...    59   5e-17
dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subt...    59   3e-16
dbj|GAU10400.1| hypothetical protein TSUD_423410, partial [Trifo...    59   7e-16
dbj|GAU35137.1| hypothetical protein TSUD_394630 [Trifolium subt...    57   1e-15
gb|PNX66050.1| ribonuclease H, partial [Trifolium pratense]            58   2e-15
gb|PNX91672.1| ribonuclease H [Trifolium pratense]                     55   4e-15
gb|PNY17625.1| ribonuclease H [Trifolium pratense]                     55   8e-15
dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subte...    54   2e-14
dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subte...    68   4e-14
dbj|GAU26057.1| hypothetical protein TSUD_225190 [Trifolium subt...    59   6e-14
dbj|GAU11845.1| hypothetical protein TSUD_75960 [Trifolium subte...    54   1e-13
dbj|GAU12548.1| hypothetical protein TSUD_182620 [Trifolium subt...    58   9e-13
gb|PNX76772.1| ribonuclease H, partial [Trifolium pratense]            54   3e-12
dbj|GAU50029.1| hypothetical protein TSUD_240220 [Trifolium subt...    57   5e-12
dbj|GAU50021.1| hypothetical protein TSUD_186220 [Trifolium subt...    60   7e-12
dbj|GAU18899.1| hypothetical protein TSUD_228890 [Trifolium subt...    55   1e-11
gb|PNX92714.1| ribonuclease H [Trifolium pratense]                     54   4e-11

>dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subterraneum]
          Length = 1049

 Score = 67.8 bits (164), Expect(2) = 4e-21
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
           IWKS GF++  FF    P  W + G+H S+  LF+AT+WW+WRARN   L  E++ +Y
Sbjct: 797 IWKSIGFSNLNFFQGDDPYVWIRNGLHCSSMFLFMATIWWIWRARNALCLNSESILFY 854



 Score = 61.2 bits (147), Expect(2) = 4e-21
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -3

Query: 316  ESIVLLAQGHTIENFAALIWNCFKSAVANH---ASIRLVSWHPTRDKDVILNVDGSSYGN 146
            ESI+  +    I ++A LI NC     +NH   ++ +LV W+      +ILNVDGSS GN
Sbjct: 849  ESILFYSLKLRIMDYALLIENCH----SNHHDTSTSKLVKWNALGGTGMILNVDGSSLGN 904

Query: 145  PXXXXXXXXXXXXXXNWIA---SSIGHSNNIHAEFMALYNGLLFAWN 14
            P               W+     ++G +N +HAE  A+Y GLL AW+
Sbjct: 905  PGISGFGGLIHNADGAWVLGFFGNLGVNNILHAELRAIYKGLLLAWD 951


>dbj|GAU17063.1| hypothetical protein TSUD_105620 [Trifolium subterraneum]
          Length = 440

 Score = 70.5 bits (171), Expect(2) = 6e-19
 Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
 Frame = -3

Query: 283 IENFAALIWNCF---KSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXX 113
           IE++A L+  C+   KS +AN    RLV W+     D+ILNVDGSS GNP          
Sbjct: 251 IEDYALLVKKCYSQQKSTLAN----RLVRWNAHDGTDMILNVDGSSIGNPEIYGFGGLIR 306

Query: 112 XXXXNWI---ASSIGHSNNIHAEFMALYNGLLFAWN 14
                WI   A +IG SN +HAE +A+Y+GL+ AW+
Sbjct: 307 NSHGAWIRGFAGNIGFSNILHAELLAVYHGLVLAWD 342



 Score = 51.2 bits (121), Expect(2) = 6e-19
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLS 307
           +WK+ GF    FF       W + G    +  +FLA +WW+WRARN   L  E +S
Sbjct: 188 LWKTIGFTDQTFFHGDNLYAWLRKGCDSPSMFMFLAALWWIWRARNKLCLANELVS 243


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score = 62.4 bits (150), Expect(2) = 3e-18
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
 Frame = -3

Query: 283  IENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 104
            +   A+LI +CF    +     R V+WHP+RD   +LNVDGS  G+              
Sbjct: 1119 VRKLASLILSCFSIVPSALKPPRWVTWHPSRDVGFVLNVDGSCLGDSGRAGFGGLIREGD 1178

Query: 103  XNWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGY 5
             +WI   +  +G SNN  AE MA+++GL  A  RGY
Sbjct: 1179 GSWIIGFSGFLGISNNTFAELMAVFHGLKIARERGY 1214



 Score = 57.0 bits (136), Expect(2) = 3e-18
 Identities = 23/58 (39%), Positives = 37/58 (63%)
 Frame = -1

Query: 474  IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
            IW++ G+++ +FFS +    W K+  +G   +LFLA +WW WRARN   +G E++  Y
Sbjct: 1056 IWEALGYSNISFFSSNNLESWLKIHSYGPAANLFLAGLWWNWRARNIVCVGNESIHMY 1113


>dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score = 59.3 bits (142), Expect(2) = 5e-17
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
 Frame = -3

Query: 280 ENFAALIWNCF-KSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 104
           EN A L+  CF K  +++ A+  +V W+      +ILNVDGSS GNP             
Sbjct: 357 ENLAQLLRMCFIKQNISSTAT--MVRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSD 414

Query: 103 XNWI---ASSIGHSNNIHAEFMALYNGLLFAW 17
             W+   A +IGH N + AE +A+Y+GL+ AW
Sbjct: 415 GAWVHGFAGNIGHLNILQAELLAIYHGLVLAW 446



 Score = 55.8 bits (133), Expect(2) = 5e-17
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = -1

Query: 471 WKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
           WK+ GF    FF      DW +  I G +  LF+A VWW+W ARN   +  E +SY+
Sbjct: 294 WKAIGFLGQTFFQGDNLNDWLRNSIDGPSSFLFMAAVWWIWCARNQLCMDNEAISYF 350


>dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score = 58.9 bits (141), Expect(2) = 3e-16
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
 Frame = -3

Query: 316  ESIVLLAQGHTIENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXX 137
            E +   +Q   I ++A L+ NC+ S     ++ + V W+      +ILNVDGSS GNP  
Sbjct: 1055 EMVSFWSQKLRIMDYALLLKNCYFST-HEISTTKFVKWNALGGTGLILNVDGSSIGNPGI 1113

Query: 136  XXXXXXXXXXXXNWI---ASSIGHSNNIHAEFMALYNGLLFAW 17
                         WI     ++G +N +H E MA+Y GLL AW
Sbjct: 1114 SGFGGLIRNADGAWIHGFFGNLGVTNILHPELMAIYKGLLLAW 1156



 Score = 53.5 bits (127), Expect(2) = 3e-16
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = -1

Query: 474  IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
            IWKS GF    FF       W   G++     LF+A +WW+WRARN   L  E +S++
Sbjct: 1003 IWKSIGFLDQNFFQGVDVYAWLHNGLNSPTMMLFIAGIWWIWRARNAMCLDSEMVSFW 1060


>dbj|GAU10400.1| hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
          Length = 284

 Score = 59.3 bits (142), Expect(2) = 7e-16
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = -3

Query: 283 IENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 104
           +    ALI  CF + V      R +SWHP +   V+LNVDGS  G+P             
Sbjct: 93  VSKLVALIVFCFPARVHTDTPRRWISWHPCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGD 152

Query: 103 XNWI---ASSIGHSNNIHAEFMALYNGLLFAWNRGYH 2
             WI   +  +G +N + AE MA+Y+GL  A   GY+
Sbjct: 153 GEWIRGFSGYLGVTNIMLAELMAVYHGLKIAREAGYN 189



 Score = 52.0 bits (123), Expect(2) = 7e-16
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENL 310
           IW S GF +S+FFS S    W +    G N   FLA +WW WRARN   +G  ++
Sbjct: 30  IWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAGLWWNWRARNIFCVGNASI 84


>dbj|GAU35137.1| hypothetical protein TSUD_394630 [Trifolium subterraneum]
          Length = 547

 Score = 57.0 bits (136), Expect(2) = 1e-15
 Identities = 24/53 (45%), Positives = 30/53 (56%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQE 316
           IWKS GF+   FF      DW + G+   +  +FLA VWW+WRARN   L  E
Sbjct: 351 IWKSIGFSDLNFFQEDDSYDWLRNGLSFPSMFIFLAAVWWIWRARNALCLNSE 403



 Score = 53.5 bits (127), Expect(2) = 1e-15
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
 Frame = -3

Query: 316 ESIVLLAQGHTIENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXX 137
           E I L A    I ++A L+ NC +S +   +  +LV W+     D+ILNV+GSS GNP  
Sbjct: 403 ELIPLFALKLRIMDYALLLRNC-QSNLHETSIPKLVKWN-AGGTDMILNVEGSSIGNPGI 460

Query: 136 XXXXXXXXXXXXNWIAS---SIGHSNNIHAEFMALYNGLLFAW 17
                         +     ++G +N +HAE MA+Y GLL AW
Sbjct: 461 YGFGGLIRNADGACVHGFFGNLGVTNILHAELMAIYKGLLLAW 503


>gb|PNX66050.1| ribonuclease H, partial [Trifolium pratense]
          Length = 197

 Score = 58.2 bits (139), Expect(2) = 2e-15
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = -3

Query: 280 ENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXX 101
           EN A L+  CF     +  +I +V W+      +ILNVD SS GNP              
Sbjct: 100 ENLAQLLRTCFLKPNIS-LTITMVRWNAHGGIGMILNVDRSSIGNPGISGFRGLIQNSDG 158

Query: 100 NWI---ASSIGHSNNIHAEFMALYNGLLFAW 17
            W+   A +IG SN +HAE +A+Y+GL+ AW
Sbjct: 159 AWVHGCAGNIGFSNILHAELLAVYHGLVLAW 189



 Score = 51.6 bits (122), Expect(2) = 2e-15
 Identities = 22/57 (38%), Positives = 28/57 (49%)
 Frame = -1

Query: 471 WKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
           WK+  F    FF       W   G+ G +  L LA VWW+WRARN   +  E  SY+
Sbjct: 37  WKAIDFVDQTFFQGDNLYGWLLYGVDGPSSFLLLAAVWWIWRARNLLCMENEVTSYF 93


>gb|PNX91672.1| ribonuclease H [Trifolium pratense]
          Length = 255

 Score = 54.7 bits (130), Expect(2) = 4e-15
 Identities = 24/58 (41%), Positives = 31/58 (53%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
           IWKS  F+   FF       W + GI  S+  LF+A VWW+W ARN   L  E + Y+
Sbjct: 36  IWKSIVFSKQIFFQGDDSYTWLQYGIRCSSMFLFMAAVWWIWWARNALCLDSELIPYF 93



 Score = 53.9 bits (128), Expect(2) = 4e-15
 Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
 Frame = -3

Query: 283 IENFAALIWNCFKSAVANHASI--RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXX 110
           I ++A L+ NC       H  +  +LV W+      +ILNVDGSS GNP           
Sbjct: 99  IVDYALLLKNCH---FHQHEVMLPKLVRWNALDGTGMILNVDGSSIGNPVIFGFGGLICN 155

Query: 109 XXXNWI---ASSIGHSNNIHAEFMALYNGLLFAW 17
               W+     ++G +N +HAE MA+Y GLL  W
Sbjct: 156 ADGAWVHGFFGNLGVTNILHAELMAIYKGLLLVW 189


>gb|PNY17625.1| ribonuclease H [Trifolium pratense]
          Length = 188

 Score = 54.7 bits (130), Expect(2) = 8e-15
 Identities = 24/57 (42%), Positives = 29/57 (50%)
 Frame = -1

Query: 471 WKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
           WKS G     FF       W K GI G     FLA +WW+WRARN   +  E +SY+
Sbjct: 37  WKSIGITDHTFFQEGDLYVWMKHGIDGPFTFSFLAAIWWIWRARNHLCMENELISYF 93



 Score = 53.1 bits (126), Expect(2) = 8e-15
 Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
 Frame = -3

Query: 280 ENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXX 101
           EN   L+  CF     +  + R V W+      +ILNVDGSS  NP              
Sbjct: 100 ENLVHLLKKCFLKHFESPTT-RTVRWNARGGSGMILNVDGSSIDNPGISGFGGLIQNCNS 158

Query: 100 NWI---ASSIGHSNNIHAEFMALYNGLLFA 20
            WI   A  IG SN +HAE MA+Y+GL  A
Sbjct: 159 AWIYGFAGYIGFSNILHAELMAVYHGLTLA 188


>dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score = 53.5 bits (127), Expect(2) = 2e-14
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQE 316
           IWKS GF    FF       W + G+  S+  LF+A +WW+WR RN   L  E
Sbjct: 472 IWKSLGFTDRNFFQEVDSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNE 524



 Score = 52.8 bits (125), Expect(2) = 2e-14
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = -3

Query: 283 IENFAALIWNC-FKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXX 107
           I ++A L+ NC F   V     I  V W+      +ILNVDGS+ GNP            
Sbjct: 535 IVDYALLLKNCHFNHQVTTLPKI--VRWNALGGTSMILNVDGSTIGNPGISGFGGLIRNA 592

Query: 106 XXNWI---ASSIGHSNNIHAEFMALYNGLLFAW 17
              WI     ++G +N +HAE MA+  GLL AW
Sbjct: 593 DGAWIHGFFGNLGVTNILHAELMAILKGLLLAW 625


>dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subterraneum]
          Length = 521

 Score = 67.8 bits (164), Expect(2) = 4e-14
 Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -3

Query: 316 ESIVLLAQGHTIENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXX 137
           ESI  ++    IE++A L+  C  + +   ++ +LV W+     D+ILNVDGSS GNP  
Sbjct: 321 ESISQVSLRMRIEDYAHLLRACLFNQITM-SNTKLVKWNALGSPDMILNVDGSSIGNPGV 379

Query: 136 XXXXXXXXXXXXNW---IASSIGHSNNIHAEFMALYNGLLFAW 17
                        W      +IG SN +HAE MALY+GLL AW
Sbjct: 380 SGFGGLIHNSKGAWAHGFVGNIGFSNILHAELMALYHGLLLAW 422



 Score = 37.7 bits (86), Expect(2) = 4e-14
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 453 NSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLS 307
           N S FF       W   G+   +  LF A +WW+W  RN   +  E++S
Sbjct: 276 NKSIFFEDDEFYVWLWNGLDSPSKLLFTAAIWWIWCTRNNLCMNNESIS 324


>dbj|GAU26057.1| hypothetical protein TSUD_225190 [Trifolium subterraneum]
          Length = 536

 Score = 58.9 bits (141), Expect(2) = 6e-14
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
 Frame = -3

Query: 283 IENFAALIWNCFKSAVANH---ASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXX 113
           I ++A LI NC     +NH   ++ +LV W+      +ILNVDGSS GNP          
Sbjct: 402 IMDYALLIENCH----SNHHDTSTSKLVKWNVLGGTSMILNVDGSSLGNPGISGFGGLIR 457

Query: 112 XXXXNWI---ASSIGHSNNIHAEFMALYNGLLFAW 17
                W+     ++G +N +HA+ MA+Y GLL AW
Sbjct: 458 NADGAWVHGFFGNLGVNNILHAKLMAIYKGLLLAW 492



 Score = 45.8 bits (107), Expect(2) = 6e-14
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -1

Query: 441 FFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
           FF    P  W + G+   +  LF+AT+WW+WR RN   L  + + +Y
Sbjct: 350 FFQGDDPYVWIRNGLRCFSMFLFMATIWWIWRTRNALCLNSDPIPFY 396


>dbj|GAU11845.1| hypothetical protein TSUD_75960 [Trifolium subterraneum]
          Length = 386

 Score = 53.5 bits (127), Expect(2) = 1e-13
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQE 316
           IWKS GF    FF       W + G+  S+  LF+A +WW+WR RN   L  E
Sbjct: 188 IWKSLGFTDHNFFQEVDSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNE 240



 Score = 50.4 bits (119), Expect(2) = 1e-13
 Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
 Frame = -3

Query: 283 IENFAALIWNC-FKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXX 107
           I ++A L+ NC F   V     I  V W+      +ILNVD SS GNP            
Sbjct: 251 IVDYALLLKNCHFNYQVTTLPKI--VRWNALGGTSMILNVDRSSIGNPGISGFGGLICNA 308

Query: 106 XXNWIAS---SIGHSNNIHAEFMALYNGLLFAW 17
              WI     ++G +N +HAE MA+  GLL AW
Sbjct: 309 YGAWIHGFFGNLGVTNILHAELMAILKGLLLAW 341


>dbj|GAU12548.1| hypothetical protein TSUD_182620 [Trifolium subterraneum]
          Length = 236

 Score = 57.8 bits (138), Expect(2) = 9e-13
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
 Frame = -3

Query: 283 IENFAALIWNCFKSAVANHASI--RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXX 110
           I ++A L+ NC+ +    H ++  +LV W+      +ILNVDGSS GNP           
Sbjct: 104 IMDYALLLKNCYFNT---HETLITKLVKWNALGGTGMILNVDGSSIGNPSISSFRGLIRN 160

Query: 109 XXXNWIA---SSIGHSNNIHAEFMALYNGLLFAW 17
               W+     ++G +N +HAE M +Y GLL AW
Sbjct: 161 ADGAWVRGFFGNLGVTNILHAELMPIYKGLLLAW 194



 Score = 43.1 bits (100), Expect(2) = 9e-13
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -1

Query: 459 GFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSY 304
           GF+   FF       W +  +  S   LF+A +WW+WR RN   L  E +S+
Sbjct: 46  GFSDHHFFQGYDAYSWLRYDLSSSALLLFIAGIWWIWRVRNVLCLDSEMISF 97


>gb|PNX76772.1| ribonuclease H, partial [Trifolium pratense]
          Length = 190

 Score = 54.3 bits (129), Expect(2) = 3e-12
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = -3

Query: 283 IENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 104
           I+NFA  +  CF     +  + R+V W+      +ILNVDGSS G P             
Sbjct: 50  IDNFAQRLKTCFLQKNISPTT-RMVRWNAQGGNGMILNVDGSSIGIPGVSGFGGLIRNSN 108

Query: 103 XNWI---ASSIGHSNNIHAEFMALYNGLLFA 20
             WI   A +IG SN +HAE +A+Y GL+ A
Sbjct: 109 GGWIQGFARNIGISNILHAELLAMYYGLVLA 139



 Score = 44.7 bits (104), Expect(2) = 3e-12
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -1

Query: 414 WFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
           W + G+ G +  LFL  VWW+WR RN   +  E +SY+
Sbjct: 7   WLRNGVDGPSKFLFLVAVWWIWRVRNQLCMENEVVSYF 44


>dbj|GAU50029.1| hypothetical protein TSUD_240220 [Trifolium subterraneum]
          Length = 357

 Score = 57.4 bits (137), Expect(2) = 5e-12
 Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
 Frame = -3

Query: 283 IENFAALIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXX 104
           I ++A L+ NC+ +      + RLV W+      +ILNVDGS  GNP             
Sbjct: 227 IMDYALLLKNCYFNTHETPTT-RLVKWNVLGGTGMILNVDGSIIGNPGISGFGGLIRNAD 285

Query: 103 XNWIASSIGH---SNNIHAEFMALYNGLLFAW 17
             W+    G+   +N +HAE MA+Y GLL AW
Sbjct: 286 GAWVHGFFGNLAVTNILHAELMAIYKGLLLAW 317



 Score = 40.8 bits (94), Expect(2) = 5e-12
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -1

Query: 459 GFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSY 304
           G +   FF       W +  +  S   LF+A +WW+WRARN   L  E +S+
Sbjct: 169 GCSDHHFFQGDDVYVWLRYDLSSSALLLFIAGIWWIWRARNALCLDSEMISF 220


>dbj|GAU50021.1| hypothetical protein TSUD_186220 [Trifolium subterraneum]
          Length = 259

 Score = 59.7 bits (143), Expect(2) = 7e-12
 Identities = 28/56 (50%), Positives = 30/56 (53%)
 Frame = -1

Query: 474 IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLS 307
           +W   GFNS  FFS  V  DW KLG   S   +FLA VWW WR RN   L  E  S
Sbjct: 31  LWNHIGFNSLDFFSNLVVYDWLKLGATSSKALIFLAGVWWSWRHRNLMFLNNETWS 86



 Score = 38.1 bits (87), Expect(2) = 7e-12
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = -3

Query: 256 NCFKSAVANHASI-RLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXNWIASSI 80
           NCF SA +N   + R + W+       ILNVDGS   +P              +++A   
Sbjct: 103 NCFFSAASNRRLVDRYIKWNHNNYSCNILNVDGSCLDSPVRSGYGGIIRNTYDHYLAGFS 162

Query: 79  ----GHSNNIHAEFMALYNGLLFA 20
               G S+ + AE  A+Y GLL A
Sbjct: 163 GFIQGSSDILLAELYAIYRGLLLA 186


>dbj|GAU18899.1| hypothetical protein TSUD_228890 [Trifolium subterraneum]
          Length = 1098

 Score = 55.1 bits (131), Expect(2) = 1e-11
 Identities = 23/56 (41%), Positives = 30/56 (53%)
 Frame = -1

Query: 474  IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLS 307
            +W   GF +S+FF  ++  +W K         LFLA VWW+WR RN   LG E  S
Sbjct: 845  VWDQLGFTNSSFFDSTMAHEWLKHSYFSPRRLLFLAGVWWIWRHRNNMCLGDETWS 900



 Score = 42.0 bits (97), Expect(2) = 1e-11
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
 Frame = -3

Query: 256  NCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXNWIASSIG 77
            NCF S+     S R + W+ T    V++N DGS  G P               +I  + G
Sbjct: 917  NCFPSSTTEETS-RCIKWNFTNFTGVVINTDGSCSGTPARTGFGCIIRNNDGRYITGASG 975

Query: 76   HSNN----IHAEFMALYNGLLFAWNRG 8
            H  N    + AE   +Y+GL  A + G
Sbjct: 976  HITNSSDILLAELSGIYHGLQLAISLG 1002


>gb|PNX92714.1| ribonuclease H [Trifolium pratense]
          Length = 1359

 Score = 53.5 bits (127), Expect(2) = 4e-11
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = -1

Query: 474  IWKSFGFNSSAFFSVSVPMDWFKLGIHGSNPHLFLATVWWLWRARNTSILGQENLSYY 301
            +W S GF++  F+  +  + W K G  GS+ ++F A VWW WR RN+     E++  Y
Sbjct: 1104 LWFSIGFSAPQFYDTTDNISWIKEGTSGSSLNIFAAGVWWAWRNRNSMCFTNEHIPQY 1161



 Score = 41.6 bits (96), Expect(2) = 4e-11
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = -3

Query: 265  LIWNCFKSAVANHASIRLVSWHPTRDKDVILNVDGSSYGNPXXXXXXXXXXXXXXNWIAS 86
            L  +CF +  +       V W+ +    +ILNVDGS  G P               WI+ 
Sbjct: 1173 LFSSCFSTNSSGTLVDHFVKWNASNMTCIILNVDGSCLGTPCRAGFGGVLRNSNGAWISG 1232

Query: 85   ----SIGHSNNIHAEFMALYNGLLFAWNRGY 5
                  G ++ ++AE +A+Y+GL  A + G+
Sbjct: 1233 FSGFIAGSTDILYAELLAIYHGLSLAKDLGH 1263