BLASTX nr result

ID: Astragalus22_contig00032803 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00032803
         (336 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012570487.1| PREDICTED: pentatricopeptide repeat-containi...    74   6e-13
dbj|GAU47920.1| hypothetical protein TSUD_13900 [Trifolium subte...    64   2e-09
gb|PNY15589.1| pentatricopeptide repeat-containing protein at3g2...    62   9e-09

>ref|XP_012570487.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Cicer arietinum]
          Length = 825

 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 37/56 (66%), Positives = 42/56 (75%)
 Frame = +1

Query: 169 MLVRLQLLYTNTLALPAPRENSAPIFIPSSKTSQQQPLPHFPNSTDPKSPLKKLNL 336
           ML+ LQLL TNTL L  PREN+ PI IPS KT+QQQ LPH P+ TD +S  KKLNL
Sbjct: 1   MLLNLQLLDTNTLPLVVPRENAVPISIPSKKTTQQQSLPHSPDGTDSESRFKKLNL 56


>dbj|GAU47920.1| hypothetical protein TSUD_13900 [Trifolium subterraneum]
          Length = 816

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 35/50 (70%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = +1

Query: 190 LYTNTLAL-PAPRENSAPIFIPSSKTSQQQPLPHFPNSTDPKSPLKKLNL 336
           L TNTLAL  APRENS PI IP+ KT+QQQPLPH PN T P+S  KK NL
Sbjct: 5   LETNTLALVAAPRENSLPISIPT-KTTQQQPLPHSPNDTHPESRFKKFNL 53


>gb|PNY15589.1| pentatricopeptide repeat-containing protein at3g23020-like protein
           [Trifolium pratense]
          Length = 829

 Score = 62.0 bits (149), Expect = 9e-09
 Identities = 34/50 (68%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = +1

Query: 190 LYTNTLAL-PAPRENSAPIFIPSSKTSQQQPLPHFPNSTDPKSPLKKLNL 336
           L TNTLAL   PRE S PI IP+ KT+QQQPLPH PN TDP+S  KK NL
Sbjct: 5   LDTNTLALVTVPREKSLPISIPT-KTTQQQPLPHSPNDTDPESRFKKFNL 53


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